Sed0010271 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGCCGAGACAATACGCGGTCGGATGGGCCGATGAGGCTACGCACCCCGACTCCATTCGGGCCACCTTGGCTGAGTTGATTTCCACTTTCATCTTTGTCTTTGCGGGCGAAGGCTCCGTTCTCGCTCTCGGTATTTTGCTCTCTTGTTTAAGTAACATGCATGCATGTTGGCCTTATGATATTTTGTATATAATAAATTTGTAAGTTTATGATAACCAAAAACATGAGCATAAGTCAAAAAGGTGTTTGGGAAACTTGGAAATTGTTGAGTTTAATTCATAGTGACCACCAAAGCCATACCATACGGTTTTCTTTGCCATTAAACATTCATGGTTATAAAAAAAAGGGTAAATTATCAAATGGGGTTCTTTTTTAAAAGTTATTGTGAAAATGGGTCCAATTTTATACAATTTGTAGAAGTGGGTTTTGGTCTCTCTTCGAGAGACGCCACACAAGCTACTTTTGGCCATGAATACACGTGTCACACCCTTGGTCAATGTTAATAAAATCTGAAGCCGTTTCGTCCAATTTTTTTTTTTTTTTTTTTTTTTTAAATTTACAGATTTATATTAAGTCCCTTTTTTTATATAAATATGATTTTTATGGATGTCTATTTTTTTTTTCTTTTTTGGCTTACTTTTTTATATTTAGTATTTCGTTTTTCTTTTCTTTCTTTCTTTATAGTATCACATTACTTTTTTTGGGAAAGTATAATCTATTAGAATTTTTTGGTTTTCCTAATTTAATTATAACAATATTTTAAAAATATTTTATTTATAATAAAATAATTCAAATTTATTTTGATTAAAAATGATCAATTTTAAGTTTTTACTCTATTGAAATCTATTAATTTAGGTTGTGTTTGATAATCATTTCGTTTTTTGTTTTTTTGTTTATGAAATTTAAGCCTATTTCTACTCAAATTTCCTATGAAAGTAGGTGCATACTAACCAAATTTGAAAAAAAAAGGTTTTGAAAGCTACTTTTTTTTGTTTACAAATTTTGATTTTGTTTATTAAAATATAAGTAAGATGTAGATATCCAAATAAAAAAAAGTTATGATAGGGGAGTTGTTGTTGGGCTTAAATTTCAAAAACAAAAAACAAAATTGTCTTAAAGAATAAGTTCGTTTTTAATAAAATTTTGACATTTGTAGAATTGTTTTTTTTTTTTACCATTCATGAAAAATCTATAGTTTTTTTCTTTCTAATTATTTTATTTAAAACTTGAAATAAGTTAGCATGTTTTTTAATTATTTAAGTAAAGATTGTTAGGATTTAAAAGAATAAGTTTTTCATTTTTTTGAGACAATTTAAAAGAAAAGGGTTGAGGTCGTTAGGATATTAAAAAAAAAAAATTATTATAAATGATAATTAATTAACTTTTTTTTATTTACACATATACATCAAATCATTTTATTCATTCATTAAAATCCTAACAATTACCCTAACAATAGTCATGCATGTTAGTTTTCAAAAAAAAAAAAGGTTAAACCCTAACAACCCTTGGAACAATCATAAATAACAAATAACAGACACACATACATTTTATCAACATTCATTATAACCCTAAAAACTACTTTTAACACATTATCAATTATTTTTTTGCAACGATCATAAATTAATATGCATTCTTAAAATCCTAATTAAACTATAACATTATATAAAAAATTAATTAGCATTTATTGTAAAAAAAAGACAATCTTAACTCTTATTTTGATATAGTTAACCATCTAACTTAAATGATTGAATATATAAAATAAAAAAATCAAAATAAACATGAAAGTAATGTGATATTAATCTAAAGAAAAGAAAGGAAAAATAAAATAAAATAAAACGTATAAAAAAAACATATTTATACAAAAAAGAATAGATAAATCTGTAAAAAGGAACAAAAAAAAAACAAAACACTGTTGAAAGAAAAAAAATTCTACAAAATTGCACCCAGATTTTTGTTATGTTGACCAAACTGCCACGTGTGTGGTCATGGAATTCGTCAAAGGAAGCTAACCCATGTGGCGTCTCTTTGAGAGACGCCAAAACCCCTTTTTAAAATTCATTTAAAATTGGACCCATTTTTGACAAAACTTTTAGAAAAGAACCCCATTTGATAATTTACCCTAAAAAAAACAACTCAGTTGATTCAAAGAAGTTTACTCCAAAATTTATTGTAGTACTTTTAAAATTTAAAATTGATCATATTCTGGTCAGTGAAGTAAAAATATAATTCAAATCAACCATAATAAGTTTGTAAAAAAAACATACCCTACTTTGGTAGAATGTCCCATGCATGGTCCATGGATGGATTATTAATTATCGATTTTGACGTGCAGATAAAGTTTTCTGGCCGTCGGATCATGGAAGTTACGGTCGTGGGGGTTATGGGTATGATCACGGTTATGGTCGAAGGGGTGGCGACACGGGCCGAGGAGCATCGGAATTAGTAGTGATAGCCATAGCGCATGCATTTGCGTTGTTCTCGGCGGTAGCAGCGAGTATGAACATCTCGGGTGGGCATGTGAATCCTGCAGTAACTTTTGGTGCACTTCTGGGAGGGAGGATATCTCTTATCCGTGCATTCTTCTATTGGGTTGCTCAGATATTGGGGGCAATTGTAGCTTCTCTTCTCTTGAGATTTGCAACCGGTGGCATGGTAAAATTAATAAATTGAAAGGAAAAAAAAAATCCAAACGTAATATAGCATTAAAATTTTGAAGGCTTAAATTGTATTCACTTTTCATCTATATGAATTGAATTTCAAATTATCAATGGTTTTTAAGAAGTGTTGGCACATGAGAATATGGAGTATTTTGGTTAAAATGCTATTTTACCTCTGTAAAAAATTTAGGGCACGTTTGGCCAGCCCAATTCAGCCCGGGAAGGGAAGGGGCGGGCCCTTCCCGGCGTTTGGGCCGCCGGGTTAACCCAGCGCGTAACCCAGCCAAACCCGGCGCGTGTAGTTCACTTTTTTTTTTTTCTTTCCGCTGGCCTGCTTCTTTCTTTTTTTTTTTTTTGATTTATTTCTTTCAACAAACTTTTCTTTTTTCTTAATTTAAAGTATTATTCTAAAATAAAAATTTATATAAGATTTGAATTTTCATCTTTTAAAATTATCTTAAATTAAGTAAATATTCTTAACCAACTCTACCACCTTATTGTTTTTATTTATATTAACTTATTTTATATATATATATATATATATTTTATTTATTTATTTATTAGTATCAAGTTTTTTCAAAATACAATATTTATCTATTTTTTTCTTCTAAATACATCCTATTTTTTAAAACATATTTGTAGTTTGATGTTTTTATAATTATAATTTGATGCATTTGATTTGATCATAAACTTTATTTTAAATAAAATAATAAGCTTGTTAACTTTTACTAATTCATTCATTTAAGTTAATGGATTTTTTTTGGAGAACCACTTAATTGATTAAATTTATACTATATGCTATTTATATATTTTTTTAATTTTAAAATGCAACAATTTTTTTTTAGATATATCAAGTTCTTTAAACAATATTTGTAATTGTTTATATATTTGACATTTTATGGACAATGTATGCATTTAAAAAAATTTATATACAAATATATATTAATTTTATTATTTATCAATTTTTTTTAAATTTATACATTTTATAAAATAAATAGAAATATATATTTAAATAATCCTAAAATAATTACTCAAAATAATTAAAGTAGTTATCTTTTTATTACATCTATCTTGATTTGAATTTCTAAACTTAATTTCATTATAAAAAATTATATTTATCTATTTTTTTAACAATTATGAAATTTATATATTTTGATAATGAAAGTTATTAAAATTTTAAATTTTATTTAAATAATAAATAAAATAAATATAAAATGATATATTATAAACATTATATTAAAAATATTAAATATCTATTTTTTTAATAAAAAAACATCACTTCACTACTTTTCTCATCCCACCAAACACCAAATTACTATCACTTCATTTCATTTATCTTCCCCTCTCATCTCACCAAACACCAATTTACTATCACTTCTTTTATCTTTCCTTCCCACCAAACACCAATTTACTCTCACTTCATTTCCCTTCCCTTCCCTTCCCGACTTCATTTCATTTATCTTCCCCTCTCATCTCACCAAACACCAATTTACTATCACTTCTTTTATCTTCTCTTCCCACCAAACACCAATTTACTCTCACTTCATTTCCCTTTTCTTCCCGTCCTAGCCAAACAAGCTCTTAGTGTTATGTATTTTAGAAGAAGCTCAAAATTCGTACAGGATAAATTCAAATTGAATATTTATAGAAATTAGTTAATTAGTAGAGTAATTGTTTCTAGAAAAAAAAAACAGTAAGGACTATTTTTAAAGTTTTTTTTTTAATTTTATTTTAACCAAATATTTATTTGTTTATATAACAAAATTTGGTGCAGCGACCACCAGCACCACTCAGGGGCCGTTTGTGTGACATATTAAAAACTCCTCATTTTTTCTTTTAAAAATAACTCTCATTTCTAACCATTCATTTGAATCATTCATTTATAACTATTAAATCATTTATAACCACTTATTTTTAATTATTCTTTTCAAATCAATCAAAATAACTCATTTTTAATTATTTCTTTTTTAACAACTAGAAATAACTAGTCATTTTGTAATTTACATTCAAACAAGGTTTTGACTATAACTCTGCTATACAAAAACTACATTCAAACGAGTTTTTGATACAACTTTCAATTTTTAACTATTTAATATAACTTCATTCACCATTTTTACATTTTGCAGCATTCTTTATATTATCATTAATTTTTTTAATAACAAATAAAAATGATAAGTTCAAAAATTGAATTTTTCCTCTTTTTTTTAATACATATGAGGGGGATAAATACCTATTCATACCTATTCATGTGCTCGAATTTGTGACGCTGATATTGAATTAATTTACAATAAAATACTATACTAAAATCATTGCGCCACCGAATTGAGATTCATAATAACAATAGAAAACGATGTTCTTTTAGATTAAGAAAGGTAGATTGTTCTTGTCTTACAACATAATAAGCTCATTAAATGCTAATTAATTACATATATCTTGGTGGAAATTGCAGAGGCCAATGGGATTCTTCGTGTCATCAGGAATATCAGAACTTCACGGGTTTCTACTAGAAATAGTGCTGACGTTTGCTTTGGTGTACACCGTGTACGCAACGGCCATAGATCCAAAGAGGGGCAGTTTGGGAACAATAGCGCCACTGGCAATCGGGTTAGTGGTCGGGGCGAATATTCTGGTGGGCGGGCCATTCGACGGGGCCTGCATGAACCCGGCCCGGGAATTTGGGCCGTCGTTAGTGGGCTGGAGATGGGACAACCATTGGATCTACTGGATCGGCCCATTACTCGGAGGTGGGCTTGCGGCCCTTGTTTATGAGTATTTGGTGATTCCAGTTGAGCCTCCTCTGCATACTCACCAGCCTTTGGCTCCTGAAGATTACTAA ATGCCGCCGAGACAATACGCGGTCGGATGGGCCGATGAGGCTACGCACCCCGACTCCATTCGGGCCACCTTGGCTGAGTTGATTTCCACTTTCATCTTTGTCTTTGCGGGCGAAGGCTCCGTTCTCGCTCTCGATAAAGTTTTCTGGCCGTCGGATCATGGAAGTTACGGTCGTGGGGGTTATGGGTATGATCACGGTTATGGTCGAAGGGGTGGCGACACGGGCCGAGGAGCATCGGAATTAGTAGTGATAGCCATAGCGCATGCATTTGCGTTGTTCTCGGCGGTAGCAGCGAGTATGAACATCTCGGGTGGGCATGTGAATCCTGCAGTAACTTTTGGTGCACTTCTGGGAGGGAGGATATCTCTTATCCGTGCATTCTTCTATTGGGTTGCTCAGATATTGGGGGCAATTGTAGCTTCTCTTCTCTTGAGATTTGCAACCGGTGGCATGAGGCCAATGGGATTCTTCGTGTCATCAGGAATATCAGAACTTCACGGGTTTCTACTAGAAATAGTGCTGACGTTTGCTTTGGTGTACACCGTGTACGCAACGGCCATAGATCCAAAGAGGGGCAGTTTGGGAACAATAGCGCCACTGGCAATCGGGTTAGTGGTCGGGGCGAATATTCTGGTGGGCGGGCCATTCGACGGGGCCTGCATGAACCCGGCCCGGGAATTTGGGCCGTCGTTAGTGGGCTGGAGATGGGACAACCATTGGATCTACTGGATCGGCCCATTACTCGGAGGTGGGCTTGCGGCCCTTGTTTATGAGTATTTGGTGATTCCAGTTGAGCCTCCTCTGCATACTCACCAGCCTTTGGCTCCTGAAGATTACTAA ATGCCGCCGAGACAATACGCGGTCGGATGGGCCGATGAGGCTACGCACCCCGACTCCATTCGGGCCACCTTGGCTGAGTTGATTTCCACTTTCATCTTTGTCTTTGCGGGCGAAGGCTCCGTTCTCGCTCTCGATAAAGTTTTCTGGCCGTCGGATCATGGAAGTTACGGTCGTGGGGGTTATGGGTATGATCACGGTTATGGTCGAAGGGGTGGCGACACGGGCCGAGGAGCATCGGAATTAGTAGTGATAGCCATAGCGCATGCATTTGCGTTGTTCTCGGCGGTAGCAGCGAGTATGAACATCTCGGGTGGGCATGTGAATCCTGCAGTAACTTTTGGTGCACTTCTGGGAGGGAGGATATCTCTTATCCGTGCATTCTTCTATTGGGTTGCTCAGATATTGGGGGCAATTGTAGCTTCTCTTCTCTTGAGATTTGCAACCGGTGGCATGAGGCCAATGGGATTCTTCGTGTCATCAGGAATATCAGAACTTCACGGGTTTCTACTAGAAATAGTGCTGACGTTTGCTTTGGTGTACACCGTGTACGCAACGGCCATAGATCCAAAGAGGGGCAGTTTGGGAACAATAGCGCCACTGGCAATCGGGTTAGTGGTCGGGGCGAATATTCTGGTGGGCGGGCCATTCGACGGGGCCTGCATGAACCCGGCCCGGGAATTTGGGCCGTCGTTAGTGGGCTGGAGATGGGACAACCATTGGATCTACTGGATCGGCCCATTACTCGGAGGTGGGCTTGCGGCCCTTGTTTATGAGTATTTGGTGATTCCAGTTGAGCCTCCTCTGCATACTCACCAGCCTTTGGCTCCTGAAGATTACTAA MPPRQYAVGWADEATHPDSIRATLAELISTFIFVFAGEGSVLALDKVFWPSDHGSYGRGGYGYDHGYGRRGGDTGRGASELVVIAIAHAFALFSAVAASMNISGGHVNPAVTFGALLGGRISLIRAFFYWVAQILGAIVASLLLRFATGGMRPMGFFVSSGISELHGFLLEIVLTFALVYTVYATAIDPKRGSLGTIAPLAIGLVVGANILVGGPFDGACMNPAREFGPSLVGWRWDNHWIYWIGPLLGGGLAALVYEYLVIPVEPPLHTHQPLAPEDY Homology
BLAST of Sed0010271 vs. NCBI nr
Match: NP_001380718.1 (aquaporin TIP3-1 [Cucumis melo]) HSP 1 Score: 515.0 bits (1325), Expect = 4.1e-142 Identity = 257/284 (90.49%), Postives = 269/284 (94.72%), Query Frame = 0
BLAST of Sed0010271 vs. NCBI nr
Match: XP_038895592.1 (probable aquaporin TIP3-2 [Benincasa hispida]) HSP 1 Score: 513.8 bits (1322), Expect = 9.0e-142 Identity = 261/285 (91.58%), Postives = 269/285 (94.39%), Query Frame = 0
BLAST of Sed0010271 vs. NCBI nr
Match: KAG6584278.1 (putative aquaporin TIP3-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 511.9 bits (1317), Expect = 3.4e-141 Identity = 257/279 (92.11%), Postives = 265/279 (94.98%), Query Frame = 0
BLAST of Sed0010271 vs. NCBI nr
Match: XP_023519163.1 (probable aquaporin TIP3-2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 511.5 bits (1316), Expect = 4.5e-141 Identity = 256/279 (91.76%), Postives = 265/279 (94.98%), Query Frame = 0
BLAST of Sed0010271 vs. NCBI nr
Match: KAG7019875.1 (putative aquaporin TIP3-2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 511.5 bits (1316), Expect = 4.5e-141 Identity = 256/279 (91.76%), Postives = 265/279 (94.98%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy Swiss-Prot
Match: O22588 (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana OX=3702 GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 6.3e-106 Identity = 192/279 (68.82%), Postives = 228/279 (81.72%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy Swiss-Prot
Match: P26587 (Aquaporin TIP3-1 OS=Arabidopsis thaliana OX=3702 GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 8.0e-101 Identity = 181/280 (64.64%), Postives = 222/280 (79.29%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy Swiss-Prot
Match: P23958 (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris OX=3885 PE=1 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 7.5e-99 Identity = 180/279 (64.52%), Postives = 215/279 (77.06%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy Swiss-Prot
Match: Q9ATL7 (Aquaporin TIP3-1 OS=Zea mays OX=4577 GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 9.8e-91 Identity = 169/280 (60.36%), Postives = 206/280 (73.57%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy Swiss-Prot
Match: Q9AT75 (Aquaporin TIP3-2 OS=Zea mays OX=4577 GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 6.4e-90 Identity = 165/277 (59.57%), Postives = 205/277 (74.01%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy TrEMBL
Match: A0A1S3AU56 (probable aquaporin TIP3-2 OS=Cucumis melo OX=3656 GN=LOC103482730 PE=3 SV=1) HSP 1 Score: 515.0 bits (1325), Expect = 2.0e-142 Identity = 257/284 (90.49%), Postives = 269/284 (94.72%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy TrEMBL
Match: A0A0A0LTX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043290 PE=3 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 2.8e-141 Identity = 256/289 (88.58%), Postives = 268/289 (92.73%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy TrEMBL
Match: A0A6J1E6R9 (probable aquaporin TIP3-2 OS=Cucurbita moschata OX=3662 GN=LOC111431313 PE=3 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 6.3e-141 Identity = 256/279 (91.76%), Postives = 264/279 (94.62%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy TrEMBL
Match: A0A6J1KM69 (probable aquaporin TIP3-2 OS=Cucurbita maxima OX=3661 GN=LOC111495835 PE=3 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.4e-140 Identity = 255/279 (91.40%), Postives = 264/279 (94.62%), Query Frame = 0
BLAST of Sed0010271 vs. ExPASy TrEMBL
Match: Q39646 (MP23 OS=Cucurbita hybrid cultivar OX=170850 PE=2 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.4e-140 Identity = 255/279 (91.40%), Postives = 264/279 (94.62%), Query Frame = 0
BLAST of Sed0010271 vs. TAIR 10
Match: AT1G17810.1 (beta-tonoplast intrinsic protein ) HSP 1 Score: 385.2 bits (988), Expect = 4.5e-107 Identity = 192/279 (68.82%), Postives = 228/279 (81.72%), Query Frame = 0
BLAST of Sed0010271 vs. TAIR 10
Match: AT1G73190.1 (Aquaporin-like superfamily protein ) HSP 1 Score: 368.2 bits (944), Expect = 5.7e-102 Identity = 181/280 (64.64%), Postives = 222/280 (79.29%), Query Frame = 0
BLAST of Sed0010271 vs. TAIR 10
Match: AT2G36830.1 (gamma tonoplast intrinsic protein ) HSP 1 Score: 292.0 bits (746), Expect = 5.2e-79 Identity = 152/279 (54.48%), Postives = 186/279 (66.67%), Query Frame = 0
BLAST of Sed0010271 vs. TAIR 10
Match: AT3G26520.1 (tonoplast intrinsic protein 2 ) HSP 1 Score: 282.3 bits (721), Expect = 4.1e-76 Identity = 147/280 (52.50%), Postives = 186/280 (66.43%), Query Frame = 0
BLAST of Sed0010271 vs. TAIR 10
Match: AT4G01470.1 (tonoplast intrinsic protein 1;3 ) HSP 1 Score: 280.4 bits (716), Expect = 1.6e-75 Identity = 143/279 (51.25%), Postives = 186/279 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|