Sed0010175 (gene) Chayote v1

Overview


Name	Sed0010175
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cysteine-rich and transmembrane domain-containing protein WIH2-like
Location	LG13: 2821878 .. 2824386 (+)
RNA-Seq Expression	Sed0010175
Synteny	Sed0010175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAACCTCTGATGTCACGACGTGTCAAAATCAAAACCGCAGACGTAAACTCCCAAACCTAATTAAAAAAAAAGATTAAGTGGAATTACAATTACTAAACTGATTAGAGAGATAAAGCCTTCCCGGATTAGCAGCAAAAACAAAATCACAACCTTTTTCCGATATATATATATATATAAATCCTTCATATCCCATTTTCTTCTCCATTGACTCTTTTCTCCTCTGTTTTTTTCTTTATTTGTTTCTCTGTTTTTTCAAATTCCGGCAGATCTCGCCGTTGATCGGTTTTGTTGTGTCGGATTTGGTTGATTTCGAGAGGGAGAAGAGATGAGTTATTATAATCAAGGTCAGCCGCCGGTCGGAGCGCCGCCGCCGCAAGGTATTTCGATCATTCTTTTGGGTTAAATTGATGGAATTATTTGTGGGTTTTTTGTGTACAGATTTCATTTTCTTCTTGTGGGCGGTGAATCCGTTTTTCTTTTTAATCTTTTCTTATATTTTACCTACTTAACTTTAAGTATTTGTTTAAATTATTATTTTTCTTTAACGATGAATTATCTGACATATTTTTCTATAAAAAAATTTAAATATTTATAATTTTATCGAAAAAGATTAAGCCCGTGAGTTTGAGCAAATTTAATCATATTAACCCACATTATCTCTTATTCGTGGACTTTGAAATTTGAGAAATACCCTTCCAGAATTTGATTTTAATGGAAAATGATTTGACAGATATTTGAATTCATGATCTGTTGTCCTAATGCATGTTAAAATTGTGGTCAATCATTGATCAACTAGTGAGTTAGACTAAATTTGATTATATGAATAAAAAAAATGCATCTAAAAATTAACAATATTAGAGAAACTCTCTAGCAGCATGGACTACCCACTGTAAAATGGTCTGAGTTGGGTTGAACTGTAATTTCATCACCCGAAGCTCGACCTGGCTCGGTCCCGTCCCGTGGACATCTTTGTTATGTGATGATTTAGGGTTTTGGTGGTGGTTTTTGGTTTAGGTTATCCGCCGGAAGGATATCCGAAGGAAGCTTATCCGCCGCCGGGATATCCGCAACAAGGATATCCACCTCCCGGAGCTTATCCGCCGCCGCAGTACGCTCCTCAGTACCAGCAACCTCCTCCGCAACAACAACAGAGTAGCAACGTCGGTTGTTTGGAAGGCTGGTAAATTTTTGTTCTGTTTCTTTTTTTATTGTATTTTTGTTCATGGCGGTTGGAATCGGATTCCGGCGACTCAGTATCGGAAACTGAGTTCACTACGAGTTCGTCTCTGGTTAAGCGTGCTCCAGATGTTTCTCTTGGAAATAACGCCACCCGTGAAATTCCTAAATTGACCCTCACCCTCAATTCTCTTTCCTCTTATGGGCCACTACTGATATGAATTTCAGTTTGAACCTAAAAAATTAAAAATAAAGATTTGCGCATTTTTTGTGGGACATTATTATTATTTTTTAGTTGATGTCCAATATTAACCTAAATATTCCTCTTTTTGTTTTTCTATTTTATTTATTTTTTCTATCAATTTTGTATTTTTTTTTTTTGGTAAAATTCAATACATGCCACATAATTTATATATATATATATACATATATATATTTGTTAATTTCTCAACAATTTATGTGAACTGCACATGGGAATATCTCAATAGTCAAAATTACATGACCATCTCTCAAGTTTTTTTAATTTGATAATTCATCTCCACAAACGTGAAAATTTGTTAGTAGCAAGTTAGTATTGGTTAAGTTTAGAATTTAGTACCTATAATTTCTTAAAAGTTGGTATTTAATTTTAAAAATTAATATTTTGTCTTTTTAATTTTAATTTTTAAATTAATATTTCGTCTCCATAATTTTAATTTTTAAATTGATATTGAGTCAAATGTTACATAATTGAAAAAAAAAGAGATAAAGTACATTAAACTAAGTGCATAGTTGTTCTGTTGGCCGTTTCTACTTAATTATTAATTAGTTAGGTATGCCCTTAATTTATATTACGATCAATGACATATGCACATAGCTAGTCAATATATCTAATGGTCTATGAATTATGCCCATTTTTTAAAAAAATATTACTCATTTTGAAAGAAAAAAAAAATATTTTTTTTCTCTCAATCTTAAAATTAAAGTTAATCTTAAACTTCTAATTATTGTGAGTTTAATATGAAACTATGCAGTTTGGCTGCGCTGTGCTGTTGCTGCTTGCTTGACGCCTGTTTCTAAAGAGTATTCATTTGCAATTGGGCTGAGCTTCAATTTCGGATCTCTCGTACAACTTTTCGCTTTTTTTTTTTTTAAAAAACTCATTGTGAAATTTTAATTTCTTGCATTTTCTTTATAATTTTATAGGCTTAGTGCTTGTACTTGGTTTCTTCTTCTTTCTCTCTACATTTTTCTTATTATAATAACATAATCTTATGTCTTCACTCTCTTTCTCTCTTCTTTTATTTGTATTTTTTTAGTTTTAATTGGACAAGATTCAAAATTTGAATTTT

mRNA sequence

TTCAACCTCTGATGTCACGACGTGTCAAAATCAAAACCGCAGACGTAAACTCCCAAACCTAATTAAAAAAAAAGATTAAGTGGAATTACAATTACTAAACTGATTAGAGAGATAAAGCCTTCCCGGATTAGCAGCAAAAACAAAATCACAACCTTTTTCCGATATATATATATATATAAATCCTTCATATCCCATTTTCTTCTCCATTGACTCTTTTCTCCTCTGTTTTTTTCTTTATTTGTTTCTCTGTTTTTTCAAATTCCGGCAGATCTCGCCGTTGATCGGTTTTGTTGTGTCGGATTTGGTTGATTTCGAGAGGGAGAAGAGATGAGTTATTATAATCAAGGTCAGCCGCCGGTCGGAGCGCCGCCGCCGCAAGGTTATCCGCCGGAAGGATATCCGAAGGAAGCTTATCCGCCGCCGGGATATCCGCAACAAGGATATCCACCTCCCGGAGCTTATCCGCCGCCGCAGTACGCTCCTCAGTACCAGCAACCTCCTCCGCAACAACAACAGAGTAGCAACGTCGGTTGTTTGGAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCTTGCTTGACGCCTGTTTCTAAAGAGTATTCATTTGCAATTGGGCTGAGCTTCAATTTCGGATCTCTCGTACAACTTTTCGCTTTTTTTTTTTTTAAAAAACTCATTGTGAAATTTTAATTTCTTGCATTTTCTTTATAATTTTATAGGCTTAGTGCTTGTACTTGGTTTCTTCTTCTTTCTCTCTACATTTTTCTTATTATAATAACATAATCTTATGTCTTCACTCTCTTTCTCTCTTCTTTTATTTGTATTTTTTTAGTTTTAATTGGACAAGATTCAAAATTTGAATTTT

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGTCAGCCGCCGGTCGGAGCGCCGCCGCCGCAAGGTTATCCGCCGGAAGGATATCCGAAGGAAGCTTATCCGCCGCCGGGATATCCGCAACAAGGATATCCACCTCCCGGAGCTTATCCGCCGCCGCAGTACGCTCCTCAGTACCAGCAACCTCCTCCGCAACAACAACAGAGTAGCAACGTCGGTTGTTTGGAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCTTGCTTGACGCCTGTTTCTAA

Protein sequence

MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYPPPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

Homology

[Close]

BLAST of Sed0010175 vs. NCBI nr
Match: XP_011652909.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus] >KGN52747.1 hypothetical protein Csa_015060 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34
Identity = 78/91 (85.71%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQ 60
          MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          PPPQQQ SS  GCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of Sed0010175 vs. NCBI nr
Match: XP_038905303.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 77/91 (84.62%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQ 60
          MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPPGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
           PPQQQ SS  GCLEGCLAALCCCCLLDACF
Sbjct: 61 APPQQQSSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of Sed0010175 vs. NCBI nr
Match: XP_008454408.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 3.7e-33
Identity = 78/91 (85.71%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQ 60
          MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          PPP QQQSS  GCLEGCLAALCCCCLLDACF
Sbjct: 61 PPP-QQQSSGPGCLEGCLAALCCCCLLDACF 90

[Close]

BLAST of Sed0010175 vs. NCBI nr
Match: XP_009375656.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x bretschneideri] >XP_009375657.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x bretschneideri])

HSP 1 Score: 150.6 bits (379), Expect = 6.3e-33
Identity = 76/90 (84.44%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQP 60
          MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPPGYP QGYPPP  YP   PP YAPQY QP
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPQGYPQGYPPPYAPQYAQP 60

Query: 61 PPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          PPQQQQSS+ GC+EGCLAALCCCCLLDACF
Sbjct: 61 PPQQQQSSSSGCMEGCLAALCCCCLLDACF 90

[Close]

BLAST of Sed0010175 vs. NCBI nr
Match: KAB2602750.1 (cysteine-rich and transmembrane domain-containing protein A [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 148.7 bits (374), Expect = 2.4e-32
Identity = 75/90 (83.33%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQP 60
          MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPPGYP QGYPPP  YP   PP YAPQY QP
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPQGYPQGYPPPYAPQYAQP 60

Query: 61 PPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          PPQQQ SS+ GC+EGCLAALCCCCLLDACF
Sbjct: 61 PPQQQSSSSSGCMEGCLAALCCCCLLDACF 90

[Close]

BLAST of Sed0010175 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.5e-26
Identity = 69/100 (69.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP----PPGAYP---------P 60
          MS YN  QPPVG PPPQGYPPEGYPK+AYPP GYP QGYP    PP  YP         P
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          P YAPQY  PP  QQQ S+ G LEGCLAALCCCCLLDACF
Sbjct: 61 PPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Sed0010175 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.5e-18
Identity = 58/88 (65.91%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 4  YNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPG---AYPPPQY-APQYQQPPP 63
          Y+Q Q PVGAPPPQGYP    PK+ YPP GYP  GYPPPG    YP   Y  PQY Q P 
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQAP- 61

Query: 64 QQQQSSNVGCLEGCLAALCCCCLLDACF 88
            QQ  N G LEGCLAALCCCCLLDACF
Sbjct: 62 --QQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Sed0010175 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-15
Identity = 58/100 (58.00%), Postives = 63/100 (63.00%), Query Frame = 0


Query: 5   NQGQPPVGAPPPQGYPPEGYPKEAYPPPG--YPQQGYPPPGAYP----PPQ-YAPQ---- 64
           +Q  P VG PP   YP EG PK+AYPPPG  YPQQGYPPP  YP    PPQ Y PQ    
Sbjct: 2   SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPE 61

Query: 65  --YQQ----PPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
             Y Q    P  QQQQ  + G LEGC+AALCC C+LDACF
Sbjct: 62  QGYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of Sed0010175 vs. ExPASy Swiss-Prot
Match: A5PLE2 (Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio OX=7955 GN=cystm1 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.7e-07
Identity = 47/101 (46.53%), Postives = 50/101 (49.50%), Query Frame = 0


Query: 3   YYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP--PPGAYPPPQYAPQ-----YQ 62
           Y  QG P  G  P QGYP +GYP + YP  GYP QGYP  PPG  PP  Y  Q     Y 
Sbjct: 18  YPAQGYPAQGY-PTQGYPAQGYPPQGYPAQGYPAQGYPNYPPG--PPGPYTAQPGYQGYP 77

Query: 63  QPPP------------QQQQSSNVGCLEGCLAALCCCCLLD 85
           QP P            +  QS    CL  C AALCCCCL D
Sbjct: 78  QPGPPTNTVYVVEQGRRDDQSGEQACLATCWAALCCCCLCD 115

[Close]

BLAST of Sed0010175 vs. ExPASy Swiss-Prot
Match: Q6BH13 (Metacaspase-1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=MCA1 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 6.1e-07
Identity = 41/70 (58.57%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 4  YNQGQPPVGA----PPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYPPPQYAPQ-YQQPP 63
          Y  G PP GA    PPPQGYPP+GYP + YPP GY  QGYPP G Y P  YAPQ YQQ  
Sbjct: 23 YQYGPPP-GAQGQYPPPQGYPPQGYPPQGYPPQGYAPQGYPPQG-YAPQGYAPQGYQQQG 82

Query: 64 PQQQQSSNVG 69
           QQQ     G
Sbjct: 83 GQQQGGQQQG 90

[Close]

BLAST of Sed0010175 vs. ExPASy TrEMBL
Match: A0A0A0KWC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000680 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.2e-35
Identity = 78/91 (85.71%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQ 60
          MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          PPPQQQ SS  GCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of Sed0010175 vs. ExPASy TrEMBL
Match: A0A1S3BZB4 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103494821 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.8e-33
Identity = 78/91 (85.71%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQ 60
          MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY Q
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          PPP QQQSS  GCLEGCLAALCCCCLLDACF
Sbjct: 61 PPP-QQQSSGPGCLEGCLAALCCCCLLDACF 90

[Close]

BLAST of Sed0010175 vs. ExPASy TrEMBL
Match: A0A5N5FN73 (Cysteine-rich and transmembrane domain-containing protein A OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_003755 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32
Identity = 75/90 (83.33%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQP 60
          MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPPGYP QGYPPP  YP   PP YAPQY QP
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPQGYPQGYPPPYAPQYAQP 60

Query: 61 PPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          PPQQQ SS+ GC+EGCLAALCCCCLLDACF
Sbjct: 61 PPQQQSSSSSGCMEGCLAALCCCCLLDACF 90

[Close]

BLAST of Sed0010175 vs. ExPASy TrEMBL
Match: A0A540N4A8 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_009056 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32
Identity = 75/90 (83.33%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQP 60
          MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPPGY  QGYPPP  YP   PP YAPQY QP
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYQPQGYPPPQGYPQGYPPPYAPQYAQP 60

Query: 61 PPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          PPQQQQSS+ GC+EGCLAALCCCCLLDACF
Sbjct: 61 PPQQQQSSSSGCIEGCLAALCCCCLLDACF 90

[Close]

BLAST of Sed0010175 vs. ExPASy TrEMBL
Match: A0A0K9RZ05 (CYSTM domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_012750 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32
Identity = 77/97 (79.38%), Postives = 80/97 (82.47%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPP-----GYPQQGYPPPG-----AYPPPQY 60
          MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPP     GYPQQGYPPPG      YPP QY
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPAQGYPQQGYPPPGGYPQQGYPPQQY 60

Query: 61 APQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          APQY QPPPQQQ  S+VGC+EGCLAALCCCCLLDACF
Sbjct: 61 APQYAQPPPQQQNQSSVGCMEGCLAALCCCCLLDACF 97

[Close]

BLAST of Sed0010175 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 118.2 bits (295), Expect = 3.2e-27
Identity = 69/100 (69.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 1  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP----PPGAYP---------P 60
          MS YN  QPPVG PPPQGYPPEGYPK+AYPP GYP QGYP    PP  YP         P
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF 88
          P YAPQY  PP  QQQ S+ G LEGCLAALCCCCLLDACF
Sbjct: 61 PPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Sed0010175 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-19
Identity = 58/88 (65.91%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 4  YNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPG---AYPPPQY-APQYQQPPP 63
          Y+Q Q PVGAPPPQGYP    PK+ YPP GYP  GYPPPG    YP   Y  PQY Q P 
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQAP- 61

Query: 64 QQQQSSNVGCLEGCLAALCCCCLLDACF 88
            QQ  N G LEGCLAALCCCCLLDACF
Sbjct: 62 --QQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Sed0010175 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 2.6e-13
Identity = 57/122 (46.72%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 4   YNQGQPPVGAPPPQGYPP-EGYPKEAYPPP-----------GYPQQGYPPP--------- 63
           Y   Q PV APPPQGYPP EGYP   YPPP           GYP  GYPPP         
Sbjct: 3   YQDPQHPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYP 62

Query: 64  -GAYPPPQY----APQ--YQQPPP----------QQQQSSNVGCLEGCLAALCCCCLLDA 88
              YPPPQY     PQ  YQ PPP          ++ +  + G +EGCLA LCCC LL+A
Sbjct: 63  AQGYPPPQYPQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEA 122

[Close]

BLAST of Sed0010175 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07
Identity = 50/122 (40.98%), Postives = 55/122 (45.08%), Query Frame = 0


Query: 9   PPVGAPPP---QGYPPEGYPKEAYPPPGYP-----QQGYPPP---GAYPPPQ-------- 68
           PP   PPP     YPP GYP  A PPPGYP      +GYPPP   G YPPP         
Sbjct: 7   PPESYPPPGYQSHYPPPGYP-SAPPPPGYPSPPSHHEGYPPPQPYGGYPPPSSRPYEGGY 66

Query: 69  --------YAPQYQQPPP--------------QQQQSSNVGC---LEGCLAALCCCCLLD 87
                   Y  Q+  PPP                 Q S+ GC   + GCLAALCCCCLL+
Sbjct: 67  QGYFAGGGYPHQHHGPPPPPPPQNYDHCHHDHHHYQDSDSGCFSFIRGCLAALCCCCLLE 126

[Close]

BLAST of Sed0010175 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 33/61 (54.10%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 7  GQPPVGAPPPQGYPPEGYPKEAYPPP--GYPQQGYPP------PGAYPPPQYAPQYQQPP 60
          G PP G PPP  YPP GYP++ YPPP   YP  GYPP      PG YPP   AP Y   P
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGYPP---APGYGGYP 72

The following BLAST results are available for this feature:

BLAST of Sed0010175 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652909.1	1.5e-34	85.71	cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]...	[more]
XP_038905303.1	1.3e-33	84.62	cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa h...	[more]
XP_008454408.1	3.7e-33	85.71	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
XP_009375656.1	6.3e-33	84.44	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x ...	[more]
KAB2602750.1	2.4e-32	83.33	cysteine-rich and transmembrane domain-containing protein A [Pyrus ussuriensis x...	[more]

BLAST of Sed0010175 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	4.5e-26	69.00	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q9FJW3	4.5e-18	65.91	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q8LCL8	6.1e-15	58.00	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
A5PLE2	4.7e-07	46.53	Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio OX=79...	[more]
Q6BH13	6.1e-07	58.57	Metacaspase-1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394...	[more]

BLAST of Sed0010175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWC5	7.2e-35	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000680 PE=4 SV=1	[more]
A0A1S3BZB4	1.8e-33	85.71	cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A5N5FN73	1.2e-32	83.33	Cysteine-rich and transmembrane domain-containing protein A OS=Pyrus ussuriensis...	[more]
A0A540N4A8	2.6e-32	83.33	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_009056 PE=4 SV=1	[more]
A0A0K9RZ05	3.3e-32	79.38	CYSTM domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_012750 PE=3...	[more]

BLAST of Sed0010175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	3.2e-27	69.00	proline-rich family protein	[more]
AT5G67600.1	3.2e-19	65.91	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT3G49845.1	2.6e-13	46.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G12810.1	1.7e-07	40.98	proline-rich family protein	[more]
AT5G45350.1	1.2e-05	54.10	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 28..40 score: 44.87 coord: 15..26 score: 77.78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..73
None	No IPR available	PANTHER	PTHR31568:SF83	UV-INDUCED PROTEIN UVI15-RELATED	coord: 1..72
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010175.1	Sed0010175.1	mRNA
Sed0010175.2	Sed0010175.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane