Sed0009992 (gene) Chayote v1

Overview


Name	Sed0009992
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Autophagy-related protein
Location	LG14: 22288444 .. 22290090 (-)
RNA-Seq Expression	Sed0009992
Synteny	Sed0009992

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAGAAGCTCCTTCAAACTTGGGATTCCTTTAGGTAATCGTTTAAGCTTCATGTATTCGCTTTGTACTTTAGTATGTGTTTGGGTATTATTTGTGTTTTTCTGTTGAGATTGTTCCATTGATGAATTGAACTACTTGGTGAAGTATTGGGGGACATGGAATTGGAATTTAGTTTAATTGCTTTGAATTTGTTCTTGGGGAGTTTATATGAATTCTAGCTGTTGTTTGCTTGTTGAAGTATCTTTGTTTTGTGTTTGTTAGTACTTGATAGATGAATATATACCTGGCTTCTCCAATTTTTTCTTTGATTTAGTGAAATCACAGAGTATAGTCAGAATTAGGTGATAATTCTTAATGCTTAACTATTATTGTTTACTTTGTTGGGTTCTTCACTTCTCAGAAAAGAGACAGGCTGAAGCTGCTCGTATAAGAGAAAAGTTCCGGGATAGAGTACCTGTAAGAATAATGCTACTTGTTTAGTTCTTTAAAAGTGGACGGCTCCGTTTGATAACCATTTGGATTTTGGTTTTTGAAAATTAAGCCTAGAAATCATACTTCCAAGTTCCATTCCACCTATAACTTGCATGCTTGTGTTATCTATCCTTTGTGAAGTCGCATTTTGAAAACTAAAAAAGAGTAGCTTGCTTCAAATGCTTAGATGAACACCGTGATATAGAAATTTGAGAGAAAATAAACTAAATTTTGAAAAAACCAAAAAACAAATTGTTATCAAATGGGACTTGAATTACTTTAGTTTTGGTACTGATTCAAATAAGTTTAACAGGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGCTGAAATTGATAGGAACAAGTGCTCTCTCTTTCCTCTATTTTCTTTATGAATCTGTGAATTAGTATGAATAGATAATTCATAATAGAATGTTTCACATTTGTAATTGATAGATTAAAGTAGTTACTATGTATGTTTGTAGTATTCGCAGTAATATTTCGTATGAAAATAATGGAGTGCTAACACCTAGTTTTGATGTGTTGATAAGCAGCAGTACCTAAATCAATAATTATAACTATTGTTTGCTTGAAAGATTTCACTGACTTTCAATAACTTCGTTGAATCGAGTGATTCCTGGAAAAAGTGCACTAGTGTTGGTTCCAGTAAAGTCATAGGATCATATCTATATGTTATTTTTTATGTTTTTGAAAGATATCTATATGTTATTTTAAAGTAGCAGATGTATCTCGAAAAATGAATATTGTTTTGGTCATGAGCAATCGGACAATCTATTTTGGAAGTGGCCAATATGGTATACTTGAACAATCATTTTCATTCAGGGTCGCACCTTTATCTTTCTCATTGCAGATACCTCGTCCCTGCTGATATAACTGTTGGACAGTTTGTCTATGTTGTTCGGAAACGGATTAAACTTAGTGCGGATAAAGCTATATTTGTATTTGTCAATGACACTCTACCTTCAACTGGTGAGAGACCATCTTTCTCTCTTAGTCTGATCTCATATTGAATGTAAGCATTTGTAATCAATTCTTCCGTACAACAGGTGCATTAATGTCTGCAATTTATGAGGAAAACAAGGACGAAGATGGTTTCCTTTACATGTCATACAGTGGAGAAAACACTTTTGGCGGGTTCCTCAGAGGATAA

mRNA sequence

ATGTCCAGAAGCTCCTTCAAACTTGGGATTCCTTTAGAAAAGAGACAGGCTGAAGCTGCTCGTATAAGAGAAAAGTTCCGGGATAGAGTACCTGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGCTGAAATTGATAGGAACAAATACCTCGTCCCTGCTGATATAACTGTTGGACAGTTTGTCTATGTTGTTCGGAAACGGATTAAACTTAGTGCGGATAAAGCTATATTTGTATTTGTCAATGACACTCTACCTTCAACTGGTGCATTAATGTCTGCAATTTATGAGGAAAACAAGGACGAAGATGGTTTCCTTTACATGTCATACAGTGGAGAAAACACTTTTGGCGGGTTCCTCAGAGGATAA

Coding sequence (CDS)

ATGTCCAGAAGCTCCTTCAAACTTGGGATTCCTTTAGAAAAGAGACAGGCTGAAGCTGCTCGTATAAGAGAAAAGTTCCGGGATAGAGTACCTGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGCTGAAATTGATAGGAACAAATACCTCGTCCCTGCTGATATAACTGTTGGACAGTTTGTCTATGTTGTTCGGAAACGGATTAAACTTAGTGCGGATAAAGCTATATTTGTATTTGTCAATGACACTCTACCTTCAACTGGTGCATTAATGTCTGCAATTTATGAGGAAAACAAGGACGAAGATGGTTTCCTTTACATGTCATACAGTGGAGAAAACACTTTTGGCGGGTTCCTCAGAGGATAA

Protein sequence

MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQFVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFLRG

Homology

[Close]

BLAST of Sed0009992 vs. NCBI nr
Match: XP_022926942.1 (autophagy-related protein 8C-like [Cucurbita moschata] >XP_022926943.1 autophagy-related protein 8C-like [Cucurbita moschata] >XP_022926944.1 autophagy-related protein 8C-like [Cucurbita moschata] >XP_022926945.1 autophagy-related protein 8C-like [Cucurbita moschata] >KAG7026630.1 Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.2 bits (552), Expect = 7.6e-53
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M++SSFKLGIPLEKRQAEAARIREK+ DRVPVIVEKAGRS IA+ID+NKYLVPADITVGQ
Sbjct: 1   MAKSSFKLGIPLEKRQAEAARIREKYPDRVPVIVEKAGRSKIADIDKNKYLVPADITVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLS++KAIFVFV DTLPSTGALMSAIYEENKDEDGFLY+SYSGEN FGGFL
Sbjct: 61  FVYVVRKRIKLSSEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYLSYSGENVFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 EG 122

[Close]

BLAST of Sed0009992 vs. NCBI nr
Match: XP_008439996.1 (PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_016899344.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >TYK13044.1 autophagy-related protein 8C [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 7.6e-53
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+RSSFKLGIPLEKRQAEAARIREK+ DR+PVIVEKAGRS+IA+IDRNKYLVP D+TVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSA+KAIFVFV DTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 GG 122

[Close]

BLAST of Sed0009992 vs. NCBI nr
Match: KAG6603779.1 (Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033949.1 Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+RSSFKLGIPLEKR+AEAAR+REK+ DR+PVIVEKAGRSNI +IDRNKYLVPAD+TVGQ
Sbjct: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSA++AIFVFV DTLPSTGALMS IYE NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 GG 122

[Close]

BLAST of Sed0009992 vs. NCBI nr
Match: KAG6594664.1 (Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 108/122 (88.52%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M++SSFKLGIPLEKRQAEA+RIREK+ DRVPVIVEKAGRS IA+ID+NKYLVPADITVGQ
Sbjct: 1   MAKSSFKLGIPLEKRQAEASRIREKYPDRVPVIVEKAGRSKIADIDKNKYLVPADITVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLS++KAIFVFV DTLPSTGALMSAIYEENKDEDGFLY+SYSGEN FGGFL
Sbjct: 61  FVYVVRKRIKLSSEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYLSYSGENVFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 EG 122

[Close]

BLAST of Sed0009992 vs. NCBI nr
Match: XP_023518800.1 (autophagy-related protein 8C-like [Cucurbita pepo subsp. pepo] >XP_023518801.1 autophagy-related protein 8C-like [Cucurbita pepo subsp. pepo] >XP_023518802.1 autophagy-related protein 8C-like [Cucurbita pepo subsp. pepo] >XP_023518803.1 autophagy-related protein 8C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.7 bits (548), Expect = 2.2e-52
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M++SSFKLGIPLEKRQAEAARIREK+ DRVPVIVEKAGRS IA+ID+NKYLVPADITVGQ
Sbjct: 1   MAKSSFKLGIPLEKRQAEAARIREKYPDRVPVIVEKAGRSKIADIDKNKYLVPADITVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLS++K IFVFV DTLPSTGALMSAIYEENKDEDGFLY+SYSGEN FGGFL
Sbjct: 61  FVYVVRKRIKLSSEKTIFVFVKDTLPSTGALMSAIYEENKDEDGFLYLSYSGENVFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 EG 122

[Close]

BLAST of Sed0009992 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-47
Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+RSSFKL  PLE+RQAEA RIREK+ DR+PVIVEKA RS+I +ID+ KYLVPAD+TVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSA+KAIF+FV +TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of Sed0009992 vs. ExPASy Swiss-Prot
Match: Q6Z1D5 (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-47
Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+RSSFKL  PLE+RQAEA RIREK+ DR+PVIVEKA RS+I +ID+ KYLVPAD+TVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSA+KAIF+FV +TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of Sed0009992 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-46
Identity = 93/119 (78.15%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M++SSFKL  PLE+RQAEAARIREK+ DR+PVIVEKA RS+I +ID+ KYLVPAD+TVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLSA+KAIF+FV + LP T A+MSAIYEE+KDEDGFLYM+YSGENTFG F
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSF 119

[Close]

BLAST of Sed0009992 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.2e-46
Identity = 91/117 (77.78%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+R+SFKL  PLE+RQAE+ARIREK+ DR+PVIVEKA ++++ EID+ KYLVPAD+TVGQ
Sbjct: 1   MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLS +KAIFVFV +TLP T +LMSAIYEENKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0009992 vs. ExPASy Swiss-Prot
Match: Q69RC4 (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.2e-46
Identity = 91/117 (77.78%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+R+SFKL  PLE+RQAE+ARIREK+ DR+PVIVEKA ++++ EID+ KYLVPAD+TVGQ
Sbjct: 1   MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLS +KAIFVFV +TLP T +LMSAIYEENKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0009992 vs. ExPASy TrEMBL
Match: A0A1S3B043 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.7e-53
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+RSSFKLGIPLEKRQAEAARIREK+ DR+PVIVEKAGRS+IA+IDRNKYLVP D+TVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSA+KAIFVFV DTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 GG 122

[Close]

BLAST of Sed0009992 vs. ExPASy TrEMBL
Match: A0A6J1EGL0 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111433905 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.7e-53
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M++SSFKLGIPLEKRQAEAARIREK+ DRVPVIVEKAGRS IA+ID+NKYLVPADITVGQ
Sbjct: 1   MAKSSFKLGIPLEKRQAEAARIREKYPDRVPVIVEKAGRSKIADIDKNKYLVPADITVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLS++KAIFVFV DTLPSTGALMSAIYEENKDEDGFLY+SYSGEN FGGFL
Sbjct: 61  FVYVVRKRIKLSSEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYLSYSGENVFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 EG 122

[Close]

BLAST of Sed0009992 vs. ExPASy TrEMBL
Match: A0A5D3CPT6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006460 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.7e-53
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+RSSFKLGIPLEKRQAEAARIREK+ DR+PVIVEKAGRS+IA+IDRNKYLVP D+TVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSA+KAIFVFV DTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 GG 122

[Close]

BLAST of Sed0009992 vs. ExPASy TrEMBL
Match: A0A6J1KPV9 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497189 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M++SSFKLGIPLEKRQAEAARIREK+ DRVPVIVEKAGRS IA+ID+NKYLVPADITVGQ
Sbjct: 1   MAKSSFKLGIPLEKRQAEAARIREKYPDRVPVIVEKAGRSKIADIDKNKYLVPADITVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
            VYVVRKRIKLS++KAIFVFV DTLPSTGALMSAIYEENKDEDGFLY+SYSGEN FGGFL
Sbjct: 61  LVYVVRKRIKLSSEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYLSYSGENVFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 EG 122

[Close]

BLAST of Sed0009992 vs. ExPASy TrEMBL
Match: A0A6J1GDU9 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 106/122 (86.89%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+RSSFKLGIPLE+R+AEAAR+REK+ DR+PVIVEKAGRSNI +IDRNKYLVPAD+TVGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSA++AIFVFV DTLPSTGALMS IYE NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 RG 123
            G
Sbjct: 121 GG 122

[Close]

BLAST of Sed0009992 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-46
Identity = 88/117 (75.21%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M++SSFK+  PLE R +E++RIREK+ DR+PVIVEKAG+S++ +ID+ KYLVPAD+TVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL A+KAIFVFV +TLP T ALMSAIYEE+KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0009992 vs. TAIR 10
Match: AT4G21980.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-46
Identity = 88/117 (75.21%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M++SSFK+  PLE R +E++RIREK+ DR+PVIVEKAG+S++ +ID+ KYLVPAD+TVGQ
Sbjct: 16  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL A+KAIFVFV +TLP T ALMSAIYEE+KDEDGFLYM+YSGENTFG
Sbjct: 76  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 132

[Close]

BLAST of Sed0009992 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 4.3e-46
Identity = 89/117 (76.07%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+ SSFKL  PLE+RQ E++RIREK+ DR+PVIVE+A RS++  ID+ KYLVPAD+TVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSA+KAIFVFV +TLP T A+MSAIY+ENKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0009992 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 4.3e-46
Identity = 89/117 (76.07%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+ SSFKL  PLE+RQ E++RIREK+ DR+PVIVE+A RS++  ID+ KYLVPAD+TVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSA+KAIFVFV +TLP T A+MSAIY+ENKDEDGFLYM+YSGENTFG
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

[Close]

BLAST of Sed0009992 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-45
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MSRSSFKLGIPLEKRQAEAARIREKFRDRVPVIVEKAGRSNIAEIDRNKYLVPADITVGQ 60
           M+ SSFK   PLEKRQAEAARIREK+ DR+PVIVE+A +S++ +IDR KYLVPAD+TVGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSADKAIFVFVNDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLS +KAIF+FV + LP T A+MSAIYEE+KDEDGFLYMSYSGENTFG F
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIF 119

The following BLAST results are available for this feature:

BLAST of Sed0009992 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926942.1	7.6e-53	89.34	autophagy-related protein 8C-like [Cucurbita moschata] >XP_022926943.1 autophagy...	[more]
XP_008439996.1	7.6e-53	89.34	PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED...	[more]
KAG6603779.1	1.7e-52	87.70	Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
KAG6594664.1	1.7e-52	88.52	Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023518800.1	2.2e-52	88.52	autophagy-related protein 8C-like [Cucurbita pepo subsp. pepo] >XP_023518801.1 a...	[more]

BLAST of Sed0009992 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YS06	1.3e-47	80.00	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=...	[more]
Q6Z1D5	1.3e-47	80.00	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C P...	[more]
M1C146	1.1e-46	78.15	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q2XPP5	3.2e-46	77.78	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]
Q69RC4	3.2e-46	77.78	Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A P...	[more]

BLAST of Sed0009992 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B043	3.7e-53	89.34	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1	[more]
A0A6J1EGL0	3.7e-53	89.34	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111433905 PE=3 SV=...	[more]
A0A5D3CPT6	3.7e-53	89.34	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1KPV9	1.8e-52	88.52	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497189 PE=3 SV=1	[more]
A0A6J1GDU9	1.8e-52	86.89	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=...	[more]

BLAST of Sed0009992 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21980.1	3.3e-46	75.21	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	3.3e-46	75.21	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	4.3e-46	76.07	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	4.3e-46	76.07	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	1.3e-45	76.47	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..117 e-value: 2.0E-48 score: 162.9
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..117
None	No IPR available	GENE3D	3.10.20.90		coord: 1..117 e-value: 1.4E-53 score: 182.0
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 1..117
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 12..114 e-value: 8.2483E-65 score: 189.979
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009992.1	Sed0009992.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule