Sed0009886 (gene) Chayote v1

Overview


Name	Sed0009886
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Caspase-6 protein
Location	LG10: 36436373 .. 36440325 (-)
RNA-Seq Expression	Sed0009886
Synteny	Sed0009886

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAACTAAAACCCTCAAATTAACAGTCGCAGTGCAGAATCGGAGAAGACAATGGCTTGGCGCTCAGGATCGCTTTCTCGGCCGTTAATGGCCACAATTCGCTCTTCATCTTCCCGTTCGTCTCCGTCGCTTCCTCAAATCCGGCCACCGCCGGCCGCCGCTCCTCCCCGCCTCCCGTCCCGCCGTTTCTCTGCTCCTTCCAGGTTCCGTTTCCTCCCCCCGAAAACCCCTAATTTTTCTGTAATGTGTTGCGAGATTGACAGTGTTTTCCATGAGCGTCTTCTTTTAGTGCCTGGTTGTTCCTTTGGCCTGTTCGTGGTTGATTGATTGTTAACTGATGGCTATTGGCTAGGAATTATGTTTGCGAAATTTCTGTAGATTTGGGATCTCTGAGTTTTATTTTACTTGTAGTTTGATTAGATGGAAAGAAACTGGAGAGAATTTTCAGAGGAAAGATCTATAGATGTGTGAATGATTCCCTTAGTGCCTGGTTGTTCCCTTAGCTTGTTCGTCGTTAGGATCCCGCAAATGTCCTACATTGGAAAGTGGGAGAGTTCAACATCAATATAAAAGAGATATAGGTTACTCCCCTCATTGCCAATTGGTTTTGAGGTGGAACCTCATATTCTCTAATATGGTATCAGAGTATATAAAGTCCAAACGGGTATCGGTCCAATAAAAATAAAAATTGAGATCCGATTCAAGATTGGTGAGCCCAAAAGAGGGGCACCATCTTGAGGGGTCATGTTAGGATCTTACAAATGTCCCACATTGGAAAGTGGGAGACTTCAATATCAGTATAAAAATGATATGGGTTACTCTCCTCATTGCCAATTTGTTTTGAGGTGGAACCCCATATTCCCTAATATTCGTGGTTGTTCTCAAGGGATGACATAGTGGTTGAAAACTTGAGCTTTGAAGGTGTTCTCCCCTCAAGGTCCCAAGTTCGAAACTCTCCCATGTCTTCATTCCTTCGATGTCTCCCGGTGCCTGACCTAGAGATGAGTGTGGTTATCCTGGATATAGTTTAGCAAGGCTTTGATTTCTTGGTTTCAAAAAAAAATTTGATGGCTACGAATTATGCTTGACAAATTTCTGTAGATTTGGGATCTCTGAGTTTTATTTACTTGTAGAGTAATTAGCTGAAAGAAACTGGAGAGAATAGTTAGAGGAATGATCTATTAGATGTAGGAATGATTCTTATTTGTAGTTTTGTAGGCCTTTTATTTATTTATTGAACGTCTTGCTTTCTTTGGGTTATAACCACTACTATTCGATAGTAGATGAAAAGGAATTGACCACTACTATTCGATTTTCCTGCATTATAATTTATAACCACTAAACATGTTATTCTTGGAACTAGATGCATCTGCATTTAGGATAAGAGGAAATGGTGTGGAAATTTTATTTTAGGTTTAAATTGTAACTTCTTGTCTTAGAACTGTGTCTAAGTCCTTAATCAATGAATTCTTAATAGTCTAATAAGTATTTTGAATTTTAACTCTATATTTCATAGTCAGAGCTTTCAATTTTGAGTTCAATAAATCTTTTGACTTCTGAACTTTTTAAGTTGACGGAGGGCGTAGATTTCAAAGTTTAGACTTGTGAAAACCTTTTTGAAATGTCAGTAATCGTTAGAATTAAATTATTTTCATTTTGGCTATATTCCATAATGATATCTTTCTTTGTCATATATGATATCAATGTGTGCCATGCACCCCAATTTATGATATGTACTTCTTCAATTTATTTGTATGAAAAAAATATTTATACAATTTCTTTATTCTCTAGGTAATAATAGTTGTCACTGAATTTTTTGGGTGATCCATTTGTTATTATATGGCATTTGTCCCCCAGGGGTAGGGTAGAGCAGCCCCATTGGTAGAGGCTTTGAGTCTCCAAGATATGCCCTCTTGGAGGTTCCAAGTTCAAAACTCACAACTGAGTTTAATTGTAAAATCCTTTGTCTTTTGGGTCCTGTCCAAACAGGCACGAGTGCCACAAGATATGTATCGGGGCAAATTGATTCTCAGTTATTAAAAAAAAGTTATTATATTTCATTTTCTTCTTTCTTTTACATGTTTTTTTTGTACTCTAGGAGCCTGGGAGAATTGGGATGCGTGCAATCCTTTTTGCCAATTTACAACATGGCTGCAGCTTCCTGCCTGACATCCCACCTCACCGTTAATGTTAGGGCTTTTTGCGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAAGATCGCTAGTGGTCTCTTTGTGAGTCTTGCTTGTTCTAGGACACATTATTTACACAGTACAGTATATTTTCTCTCTTCTTGTTACCTATAGTGGCCTGGCCTAGATCCTAGGTATGAATTTCAATTGTTAAGTTTGCACAGCAAAAGTTTATGTTTATGGTATAGTAGATAAACTTAAAAGTTGTCAACAACACAAAGTCTAGGGGATTAGCTTCTCTCACACACAGCATTTGAGTTTGGTGGATAAGATCTTAAGAAGGATTTGGTTATGCATAATACATTGGATTCAAGTATTTTCCAACTTATATGGAGACTGGGAACCAGGAAATCCAGCTGCTTGATCCTTGATGGCGAATTGCAGAAAAGTAGTTGCAATGCAAGTGTTAATTTATTGTCAAATTTAAATGGTATTTTTTGCACTATCACTGAGTGACGGAGAGCCTTGGAGAACTAAGGAGTGGTTAATTCAATCCATGGTGGTCATCTACCTTTTTCTGAGTTTTCTTGACATTCAAATGTTGTAGAGTCAGGTAATATGTCTCTTGACAATAGTTAAGATGCACGCAAACTGACCCAGATAGTCATGGAACTAAAAAGAAAGAAACTCTTGGGCCACTCCCTCTTCCCCCAATACATAGTGTTAGACTCCTAAAAAGATAACCTAATCATAAAAGTTACAAATTAAATTGGAAACCCCTATGATCATTTATAGAAATTGGTGGATATGTTTTTTTTTTTAAAATCGGGAAATCGGAGCTTCACTCCCCTATACCCGGGGCACCACTGGCCCGTCTCTAGACTGTGGCACCGGGATACTTCGAAGGGTATTCTAGTTTAAACGCTTTTCAGTGGCCTCGAACCAGTGATCTCTCAAGGAAGCATGCCTTGAAGTCTTTAGCCTTAATCGTTAGGCTACCCCTTGGGGATAGAACTTGGTGGAAATATCATCTACCTCAACTCAACTAGAAGTGTGTGCATTTTTATAGTATCTTCTTTTTCTTTGTTCCAACGCAGTAATTAGAATGATATACTTATTTCTTCACACCCTTGTAACTAAACGTTATGAGTAGAACTTTTGTCCATCTGGCTGATAAATCACGTTAGGGTGCCTGTTTCACGGCTCCAATCAATATCGTTGTCTTTTATGGGTCTAATCATTCTGGAATGGTCTAGTGAGGATTTTGGAGAACTAAGAAATAGGTTCAATTCAGAGTGTCTACCTACCTATTTATGTTGTAAGTTCAGATGGTTTGTCCCATAACGATAGTTAAGGTGCACACAAGCTGGCCCAAACAAAATGATTTAATTTGGTAACTTTTGGATTGATTCTCATAGCTGCTGTGTGTTCCTTTCAGGTACTTGAGTTCAATGAGATTAAACACATCATGTGCGGTCAATATTCGGGTGCAGAGGACTCATGAAGAGTTGATAGTTCAGGAACTAATGATTTGGAAATTTGATAATAAGTGTTCTTTATTAGATACTAATAACCAGAACGGGGATTAAAACATTTGCTAGATTAACTCATATCCTCAAGCCGTTGTTTCTCGATAATAATCGCTTGCGATTTTCTGTCATTGATTTACTTTTGGAAAGAAATTATGTTTTCCATAGTCTCAATCAAATAATGGATAATATTCTGAACTCAAATCGAATGTTGCATCGAGACTCAACTTTGAACATGTTGCAAGGAAACTTTGCTCTTAGTAGCTT

mRNA sequence

AGAAACTAAAACCCTCAAATTAACAGTCGCAGTGCAGAATCGGAGAAGACAATGGCTTGGCGCTCAGGATCGCTTTCTCGGCCGTTAATGGCCACAATTCGCTCTTCATCTTCCCGTTCGTCTCCGTCGCTTCCTCAAATCCGGCCACCGCCGGCCGCCGCTCCTCCCCGCCTCCCGTCCCGCCGTTTCTCTGCTCCTTCCAGGAGCCTGGGAGAATTGGGATGCGTGCAATCCTTTTTGCCAATTTACAACATGGCTGCAGCTTCCTGCCTGACATCCCACCTCACCGTTAATGTTAGGGCTTTTTGCGAGCTGTCTCATGGTACTTGAGTTCAATGAGATTAAACACATCATGTGCGGTCAATATTCGGGTGCAGAGGACTCATGAAGAGTTGATAGTTCAGGAACTAATGATTTGGAAATTTGATAATAAGTGTTCTTTATTAGATACTAATAACCAGAACGGGGATTAAAACATTTGCTAGATTAACTCATATCCTCAAGCCGTTGTTTCTCGATAATAATCGCTTGCGATTTTCTGTCATTGATTTACTTTTGGAAAGAAATTATGTTTTCCATAGTCTCAATCAAATAATGGATAATATTCTGAACTCAAATCGAATGTTGCATCGAGACTCAACTTTGAACATGTTGCAAGGAAACTTTGCTCTTAGTAGCTT

Coding sequence (CDS)

ATGGCTTGGCGCTCAGGATCGCTTTCTCGGCCGTTAATGGCCACAATTCGCTCTTCATCTTCCCGTTCGTCTCCGTCGCTTCCTCAAATCCGGCCACCGCCGGCCGCCGCTCCTCCCCGCCTCCCGTCCCGCCGTTTCTCTGCTCCTTCCAGGAGCCTGGGAGAATTGGGATGCGTGCAATCCTTTTTGCCAATTTACAACATGGCTGCAGCTTCCTGCCTGACATCCCACCTCACCGTTAATGTTAGGGCTTTTTGCGAGCTGTCTCATGGTACTTGA

Protein sequence

MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQSFLPIYNMAAASCLTSHLTVNVRAFCELSHGT

Homology

[Close]

BLAST of Sed0009886 vs. NCBI nr
Match: XP_022927655.1 (uncharacterized protein LOC111434477 isoform X1 [Cucurbita moschata] >XP_023529521.1 uncharacterized protein LOC111792351 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-33
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP  AP RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTAPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY++ AASCLTSHLT+NVRAFCELSHGT
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. NCBI nr
Match: XP_022927656.1 (uncharacterized protein LOC111434477 isoform X2 [Cucurbita moschata] >XP_023529522.1 uncharacterized protein LOC111792351 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-33
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP  AP RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTAPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY++ AASCLTSHLT+NVRAFCELSHGT
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. NCBI nr
Match: KAG7022481.1 (hypothetical protein SDJN02_16212 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 5.1e-33
Identity = 75/91 (82.42%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP  AP RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTAPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHG 92
          SFLPIY++ AASCLTSHLT+NVRAFCELSHG
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHG 91

[Close]

BLAST of Sed0009886 vs. NCBI nr
Match: XP_022989026.1 (uncharacterized protein LOC111486212 isoform X1 [Cucurbita maxima])

HSP 1 Score: 151.0 bits (380), Expect = 5.1e-33
Identity = 75/92 (81.52%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP   P RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTTPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY++ AASCLTSHLT+NVRAFCELSHGT
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. NCBI nr
Match: XP_022989027.1 (uncharacterized protein LOC111486212 isoform X2 [Cucurbita maxima])

HSP 1 Score: 151.0 bits (380), Expect = 5.1e-33
Identity = 75/92 (81.52%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP   P RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTTPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY++ AASCLTSHLT+NVRAFCELSHGT
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. ExPASy TrEMBL
Match: A0A6J1EI96 (uncharacterized protein LOC111434477 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434477 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.4e-34
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP  AP RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTAPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY++ AASCLTSHLT+NVRAFCELSHGT
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. ExPASy TrEMBL
Match: A0A6J1EPK9 (uncharacterized protein LOC111434477 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434477 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.4e-34
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP  AP RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTAPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY++ AASCLTSHLT+NVRAFCELSHGT
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. ExPASy TrEMBL
Match: A0A6J1JEM6 (uncharacterized protein LOC111486212 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486212 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33
Identity = 75/92 (81.52%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP   P RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTTPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY++ AASCLTSHLT+NVRAFCELSHGT
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. ExPASy TrEMBL
Match: A0A6J1JIV5 (uncharacterized protein LOC111486212 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486212 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33
Identity = 75/92 (81.52%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR LM+T+RSSSSR +PS PQ+RPPP   P RLP+R FSAPSRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTTPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY++ AASCLTSHLT+NVRAFCELSHGT
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. ExPASy TrEMBL
Match: A0A6J1D623 (uncharacterized protein LOC111017370 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017370 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MAWRSGSLSRPLMATIRSSSSRSSPSLPQIRPPPAAAPPRLPSRRFSAPSRSLGELGCVQ 60
          MAWRSGSLSR L++T+RSSSSR +PS+PQ+RPPP  AP RLP R FSA SRSLGELGC+Q
Sbjct: 1  MAWRSGSLSRTLISTVRSSSSRLTPSVPQLRPPPVTAPRRLPGRHFSAASRSLGELGCLQ 60

Query: 61 SFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          SFLPIY+M AA+CLTSHLTVNVRAFCELSHGT
Sbjct: 61 SFLPIYSMTAATCLTSHLTVNVRAFCELSHGT 92

[Close]

BLAST of Sed0009886 vs. TAIR 10
Match: AT2G15000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAWR-SGSLSRPLM-ATIRSSSSRS-SPSLPQIRPPPAAAPPRLPSRR--FSAPSRSLGE 60
          MAWR +GS +R  + AT RS S RS + +LP++RPP ++    LPSRR  FS+PSR+LG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSS----LPSRRFTFSSPSRNLGA 60

Query: 61 LGCVQSFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          LGC QSFLP+Y++ A S LTSHL VN+RAFCELS+GT
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93

[Close]

BLAST of Sed0009886 vs. TAIR 10
Match: AT2G15000.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAWR-SGSLSRPLM-ATIRSSSSRS-SPSLPQIRPPPAAAPPRLPSRR--FSAPSRSLGE 60
          MAWR +GS +R  + AT RS S RS + +LP++RPP ++    LPSRR  FS+PSR+LG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSS----LPSRRFTFSSPSRNLGA 60

Query: 61 LGCVQSFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          LGC QSFLP+Y++ A S LTSHL VN+RAFCELS+GT
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93

[Close]

BLAST of Sed0009886 vs. TAIR 10
Match: AT2G15000.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAWR-SGSLSRPLM-ATIRSSSSRS-SPSLPQIRPPPAAAPPRLPSRR--FSAPSRSLGE 60
          MAWR +GS +R  + AT RS S RS + +LP++RPP ++    LPSRR  FS+PSR+LG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSS----LPSRRFTFSSPSRNLGA 60

Query: 61 LGCVQSFLPIYNMAAASCLTSHLTVNVRAFCELSHGT 93
          LGC QSFLP+Y++ A S LTSHL VN+RAFCELS+GT
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93

[Close]

BLAST of Sed0009886 vs. TAIR 10
Match: AT2G15000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 5.8e-19
Identity = 57/96 (59.38%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1  MAWR-SGSLSRPLM-ATIRSSSSRS-SPSLPQIRPPPAAAPPRLPSRR--FSAPSRSLGE 60
          MAWR +GS +R  + AT RS S RS + +LP++RPP ++    LPSRR  FS+PSR+LG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSS----LPSRRFTFSSPSRNLGA 60

Query: 61 LGCVQSFLPIYNMAAASCLTSHLTVNVRAFCELSHG 92
          LGC QSFLP+Y++ A S LTSHL VN+RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

[Close]

BLAST of Sed0009886 vs. TAIR 10
Match: AT2G15000.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 5.8e-19
Identity = 57/96 (59.38%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1  MAWR-SGSLSRPLM-ATIRSSSSRS-SPSLPQIRPPPAAAPPRLPSRR--FSAPSRSLGE 60
          MAWR +GS +R  + AT RS S RS + +LP++RPP ++    LPSRR  FS+PSR+LG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSS----LPSRRFTFSSPSRNLGA 60

Query: 61 LGCVQSFLPIYNMAAASCLTSHLTVNVRAFCELSHG 92
          LGC QSFLP+Y++ A S LTSHL VN+RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

The following BLAST results are available for this feature:

BLAST of Sed0009886 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927655.1	1.7e-33	82.61	uncharacterized protein LOC111434477 isoform X1 [Cucurbita moschata] >XP_0235295...	[more]
XP_022927656.1	1.7e-33	82.61	uncharacterized protein LOC111434477 isoform X2 [Cucurbita moschata] >XP_0235295...	[more]
KAG7022481.1	5.1e-33	82.42	hypothetical protein SDJN02_16212 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022989026.1	5.1e-33	81.52	uncharacterized protein LOC111486212 isoform X1 [Cucurbita maxima]	[more]
XP_022989027.1	5.1e-33	81.52	uncharacterized protein LOC111486212 isoform X2 [Cucurbita maxima]	[more]

BLAST of Sed0009886 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0009886 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EI96	8.4e-34	82.61	uncharacterized protein LOC111434477 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EPK9	8.4e-34	82.61	uncharacterized protein LOC111434477 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JEM6	2.5e-33	81.52	uncharacterized protein LOC111486212 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JIV5	2.5e-33	81.52	uncharacterized protein LOC111486212 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1D623	2.1e-32	80.43	uncharacterized protein LOC111017370 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0009886 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15000.1	1.5e-19	59.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.4	1.5e-19	59.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.5	1.5e-19	59.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.2	5.8e-19	59.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.3	5.8e-19	59.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	PANTHER	PTHR33156:SF26	OS12G0592200 PROTEIN	coord: 1..99
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009886.1	Sed0009886.1	mRNA
Sed0009886.2	Sed0009886.2	mRNA