Sed0009807 (gene) Chayote v1

Overview


Name	Sed0009807
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Eukaryotic translation initiation factor 3 subunit F
Location	LG03: 2387143 .. 2390360 (+)
RNA-Seq Expression	Sed0009807
Synteny	Sed0009807

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACATTCAGCGATCCAATTGTTAGATACTTTCTTCAAAAAAAAAAAAAAACAGACCGCAACCGGAAACCCTAGCATCTGCTTCTTCGCTCGTCCGCGTCTCTTCGGCGTCCAGTTTTGCAGAGCTAGGTTTACTGGAACTTCCGGCAATGGCGACGACTGAGAATACGGTTCTGCAATTTTCACAGTCTTCCATCACTTTATCTGCCAAGGTCCATCCTCTGGTTATCTTCAACATCTGCGATTGCTATGTGAGGCGTCCGGACCAGGCCGACCGAGTGATCGGTACTCTTCTCGGCTCTGTTTCTCCTGATGGAACCGTTGATATTCGCAACTCATATGCTGTTCCTCATAACGAGTTCTCCGATCAGGTCCTCCTTACTCTCCGTTTAACTCGCTTTTACTGTTTCTTTGATCTAATGTTTTAGCGAAGCCACTTATTGGATTTTGAGTAATAATCAAAATCATAGTTTCTATGTTTTTCATTGACGGATTGATCGCTTATTTAAATCTGTTTAGAAAATCAGGATTCACTTCCTTCTTTCTGCTCTTTAGTTTTTTCTTTCGAATATATTGTAAAATTACTTAAACGAGGGAATTGTGAGCATTTAGAATATGGTTGCAGATGAACCTCGAATATTTTTTTATGTGTTTTTTTCCTTGAGCTTGAATGTTTATTGCGTTAGGCTTGTTAAAGATGGTTATTCTTTGTTATACAATCGTGCAATTGATTTGCGAATTCCAAATCCACAATTGCACTCTTTGATTCCAACTTCATTGTATTCTTTATCATAACAGGTTGCGCTGGATATTGATTATCATCACAATATGTTAAATTCCCACCAGAAAGTTAATCCAAAGGAAGTTATTGTTGGATGGTAAATCCATTGATCCTTATTTACTATGTTTATCAGCTATGGGTGAAGTGATTTTTCTTTTTGAATAAGAAGCTGGAGTTCTTTTACATAAAGGAGGAACAAAAATTGTCTAGTTACATAAATAACTGACTGACTTAGTGTAAGAGATAAACAAGGAAAATAAATGACAAATATCATCCCAAAGAGGATCCTTTGAATTATCTTCAGCTTTATCAACTATAGTTAAAGTGCTTTAGTTCGTTTACACGTTTTTTGCAAACCGCGTATGTTCTCCTCTGTTCTCAGCCATTGACCACTGTAGATTTCTTACTTTCCAATATGGAATTGGATTCTTATTGGGATGAAGATTGCTGGTAACGTTTGTTTGTCTGTTACCAATTGATAGACCTCAGTTTTAATTTAAACTTATTATTTAGTCACTAGGAATATTACTCTTGGTTGAAAACTTGATATGTCACAATGTTGATAATAGTTTATTTAAATTTTTTGTAAATATTCACAAATAGTCTATTTTGGTAGACACGTTTTGTTATAATACCTTATGCACTATGAATACTTACAGGTACTCAACTGGTATGGGAGTTACAGGTGGCAGTGCATTGATACATGAGTTTTATTCTAGAGAAGTTGCAAACCCTATTCATCTGACTGTTGATACTGGATTTAAAAATGGAGAAGGGACAATAAAAGCTTATATCTCTTTTAATTTGTCTCTGAGTGATAAACAACTAGCTGCCCAGTTTCAAGAAATTCCTCTAGATCTTCGAATGGTTGAAGCTGAGAGACTTGGATGTACGAATTTAGTCAACGCTCATGTTTTACTTTCTTAATTGAATTGTCGAAAATGCACTCTCGATCTCACAAACACTTGCCCACGCCACACGCACCTTTTTTTCCATTGACATAAATGCATGCACAAAGTTTTAGGTAATAGTCTCTAATTGAAACACACAACTAAAAGATTTTTTTTTTTTTTTTTAATCTTAAACCTTTTGAACATTTATATTTTTGTAGCTTGTCTTATCTTTGTGGACACAGCTTGTGAAATACTCTTATTAAGCCCTGTTGCCACTATTTATATATTGTGACGTCGATGTATCTTAATCATTTTCTGAAATAGTTTGATAGTGTTATTTTTGTTTGACAATTTGTGGGGGATTCGGAACTTTGATCTCGAGGGTATTAAGCTATGCTGCTCATTATTTTATGAAATAGTTCAATTGTGTTTGTTTTATACTGGCCATTTTTTATGCATACTGGCCAAGCCCCAATGCTAATGCTATTTGTGATGATAGTTGATATTCTGAAGACAACTTCTGTCGATAAGCTGCCAAATGATTTGGAAGGAATGGAATCTTCAATGGAGAGATTGCTTGCCTTAATAGACGATATTTACAAATATGTTAACAACGTTGTGGTGAGTGACATTTGGGTCCTCTTTTTTATAAATCATCTTTGTTTGCTCATGTTCCTACTCTCTTAGGAAGGGCATGTTGAGCCAGATAACACGATTGGGAGATATCTAGCCGATGCGGTAGCATCTCTTCCAAAACTGTCGCCATCCGCTTTTGATAAACTGATGAATGACAATGTGCAGGTGAGATTATTAAATCATACCACCTTATATTTCATGATGCTGTCAAATAAAGACTGATGTTGGTTAAGCATTAATAGTTTGAGTTTGGTGTCTATTTAATGGATTGGCTATAAGGTTCAATTTTATGCATGGAAATCACCTCACGGTTTAACCCTGTTTCCATTTTGATTGCTTCCCACAGGACCATTTGCTGTTGTTGTATTTGTCAAGTATCACCAGGACACAACTGAGCTTAGCCGAAAAGTTGAATACGGCTGCGCAGATTCTGTAACTTCGACCCGCATCAACGATTTCACGTGTTATTTGTTTGGTGATTGACCAAAATCCAAAACTTCAGGTTCCTAGTTCTGCTTTGAAATACTCCGATTCCCTCTTAAGAAACCCCTTTTTTGATTGAGTTCTCTGTTAGATTCTTATACTGCTGCCTTCTGGAATATGTTTAGTTTAACGACAATGTTTGTACTACCATTATTACCATTAAGAATATTGTCCAGACGCCCAATTTTCCCTCATACTCAGTATTATGTGACCATTAATTTGTCTTTTTCATTTTTCACCCCCTGAAGTATTATTGATCGTTAAAAGACAGCAATATGATTTAATTTCATTTTTGAACCATCATAAGGTTGCTTTAGTGGTCTTGAGAATTTAAGAAGTTAAAATTTAATCTATGATTGTCATCTATTTAGAAATTAAAAATTAAATTTTCTTGTCAACGGAAGGTTGAGATATTCGGAAGTTGAG

mRNA sequence

ATACATTCAGCGATCCAATTGTTAGATACTTTCTTCAAAAAAAAAAAAAAACAGACCGCAACCGGAAACCCTAGCATCTGCTTCTTCGCTCGTCCGCGTCTCTTCGGCGTCCAGTTTTGCAGAGCTAGGTTTACTGGAACTTCCGGCAATGGCGACGACTGAGAATACGGTTCTGCAATTTTCACAGTCTTCCATCACTTTATCTGCCAAGGTCCATCCTCTGGTTATCTTCAACATCTGCGATTGCTATGTGAGGCGTCCGGACCAGGCCGACCGAGTGATCGGTACTCTTCTCGGCTCTGTTTCTCCTGATGGAACCGTTGATATTCGCAACTCATATGCTGTTCCTCATAACGAGTTCTCCGATCAGGTTGCGCTGGATATTGATTATCATCACAATATGTTAAATTCCCACCAGAAAGTTAATCCAAAGGAAGTTATTGTTGGATGGTACTCAACTGGTATGGGAGTTACAGGTGGCAGTGCATTGATACATGAGTTTTATTCTAGAGAAGTTGCAAACCCTATTCATCTGACTGTTGATACTGGATTTAAAAATGGAGAAGGGACAATAAAAGCTTATATCTCTTTTAATTTGTCTCTGAGTGATAAACAACTAGCTGCCCAGTTTCAAGAAATTCCTCTAGATCTTCGAATGGTTGAAGCTGAGAGACTTGGATTTGATATTCTGAAGACAACTTCTGTCGATAAGCTGCCAAATGATTTGGAAGGAATGGAATCTTCAATGGAGAGATTGCTTGCCTTAATAGACGATATTTACAAATATGTTAACAACGTTGTGGAAGGGCATGTTGAGCCAGATAACACGATTGGGAGATATCTAGCCGATGCGGTAGCATCTCTTCCAAAACTGTCGCCATCCGCTTTTGATAAACTGATGAATGACAATGTGCAGGACCATTTGCTGTTGTTGTATTTGTCAAGTATCACCAGGACACAACTGAGCTTAGCCGAAAAGTTGAATACGGCTGCGCAGATTCTGTAACTTCGACCCGCATCAACGATTTCACGTGTTATTTGTTTGGTGATTGACCAAAATCCAAAACTTCAGGTTCCTAGTTCTGCTTTGAAATACTCCGATTCCCTCTTAAGAAACCCCTTTTTTGATTGAGTTCTCTGTTAGATTCTTATACTGCTGCCTTCTGGAATATGTTTAGTTTAACGACAATGTTTGTACTACCATTATTACCATTAAGAATATTGTCCAGACGCCCAATTTTCCCTCATACTCAGTATTATGTGACCATTAATTTGTCTTTTTCATTTTTCACCCCCTGAAGTATTATTGATCGTTAAAAGACAGCAATATGATTTAATTTCATTTTTGAACCATCATAAGGTTGCTTTAGTGGTCTTGAGAATTTAAGAAGTTAAAATTTAATCTATGATTGTCATCTATTTAGAAATTAAAAATTAAATTTTCTTGTCAACGGAAGGTTGAGATATTCGGAAGTTGAG

Coding sequence (CDS)

ATGGCGACGACTGAGAATACGGTTCTGCAATTTTCACAGTCTTCCATCACTTTATCTGCCAAGGTCCATCCTCTGGTTATCTTCAACATCTGCGATTGCTATGTGAGGCGTCCGGACCAGGCCGACCGAGTGATCGGTACTCTTCTCGGCTCTGTTTCTCCTGATGGAACCGTTGATATTCGCAACTCATATGCTGTTCCTCATAACGAGTTCTCCGATCAGGTTGCGCTGGATATTGATTATCATCACAATATGTTAAATTCCCACCAGAAAGTTAATCCAAAGGAAGTTATTGTTGGATGGTACTCAACTGGTATGGGAGTTACAGGTGGCAGTGCATTGATACATGAGTTTTATTCTAGAGAAGTTGCAAACCCTATTCATCTGACTGTTGATACTGGATTTAAAAATGGAGAAGGGACAATAAAAGCTTATATCTCTTTTAATTTGTCTCTGAGTGATAAACAACTAGCTGCCCAGTTTCAAGAAATTCCTCTAGATCTTCGAATGGTTGAAGCTGAGAGACTTGGATTTGATATTCTGAAGACAACTTCTGTCGATAAGCTGCCAAATGATTTGGAAGGAATGGAATCTTCAATGGAGAGATTGCTTGCCTTAATAGACGATATTTACAAATATGTTAACAACGTTGTGGAAGGGCATGTTGAGCCAGATAACACGATTGGGAGATATCTAGCCGATGCGGTAGCATCTCTTCCAAAACTGTCGCCATCCGCTTTTGATAAACTGATGAATGACAATGTGCAGGACCATTTGCTGTTGTTGTATTTGTCAAGTATCACCAGGACACAACTGAGCTTAGCCGAAAAGTTGAATACGGCTGCGCAGATTCTGTAA

Protein sequence

MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDILKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL

Homology

[Close]

BLAST of Sed0009807 vs. NCBI nr
Match: XP_022990544.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita maxima])

HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149
Identity = 270/285 (94.74%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTENTVLQFSQSS +LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTENTVLQFSQSSNSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REV+NPIHLTVDTGFKNGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVSNPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTS+DKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVEPDNTIGR+LA+ VASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEPDNTIGRFLAETVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQL LAEKLNTAAQIL
Sbjct: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLGLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. NCBI nr
Match: XP_022921866.1 (eukaryotic translation initiation factor 3 subunit F [Cucurbita moschata] >XP_023545173.1 eukaryotic translation initiation factor 3 subunit F-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 539.3 bits (1388), Expect = 2.0e-149
Identity = 270/285 (94.74%), Postives = 280/285 (98.25%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTE+TVLQFSQSS +LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REV+NPIHLTVDTGFKNGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVSNPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTS+DKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVEPDNTIGR+LA+ VASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEPDNTIGRFLAETVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. NCBI nr
Match: XP_022939113.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita moschata])

HSP 1 Score: 537.3 bits (1383), Expect = 7.8e-149
Identity = 270/285 (94.74%), Postives = 278/285 (97.54%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTE+TVLQFSQSS TLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRM+EAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMIEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTSVDKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVE DNTIGR+LAD VASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSP+AFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. NCBI nr
Match: XP_008441439.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit F [Cucumis melo] >KAA0055064.1 eukaryotic translation initiation factor 3 subunit F [Cucumis melo var. makuwa])

HSP 1 Score: 537.0 bits (1382), Expect = 1.0e-148
Identity = 271/285 (95.09%), Postives = 277/285 (97.19%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTE TVLQFSQSS TLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTSVDKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVE DNTIGR+LAD VASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSP+AFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. NCBI nr
Match: XP_038884110.1 (eukaryotic translation initiation factor 3 subunit F [Benincasa hispida])

HSP 1 Score: 537.0 bits (1382), Expect = 1.0e-148
Identity = 271/285 (95.09%), Postives = 277/285 (97.19%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTENTVLQFSQSS TLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LK TSVDKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVE DNTIGR+LAD VASLP
Sbjct: 181 LKRTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSP+AFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. ExPASy Swiss-Prot
Match: O04202 (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana OX=3702 GN=TIF3F1 PE=1 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.7e-125
Identity = 220/291 (75.60%), Postives = 253/291 (86.94%), Query Frame = 0


Query: 2   ATTENTVLQFSQSSIT-------LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSP 61
           AT+E+T+LQF   S T       L+A++HPLVIFN+CDC+VRRPD A+RVIGTLLGS+ P
Sbjct: 3   ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILP 62

Query: 62  DGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSAL 121
           DGTVDIRNSYAVPHNE SDQVA+DIDYHHNML SH KVN KE IVGWYSTG GV GGS+L
Sbjct: 63  DGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSL 122

Query: 122 IHEFYSREVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAE 181
           IH+FY+REV NPIHLTVDTGF NGEGTIKA++S NLSL D+QL A FQEIP+DLRMV+AE
Sbjct: 123 IHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAE 182

Query: 182 RLGFDILKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLAD 241
           R+GFD+LK TSVDKLPNDLEGME +MERLL LI+D+YKYV++VV G + PDN IGR++AD
Sbjct: 183 RVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIAD 242

Query: 242 AVASLPKLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           AVASLPKL P  FD L+ND++QD LLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 243 AVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293

[Close]

BLAST of Sed0009807 vs. ExPASy Swiss-Prot
Match: Q9DCH4 (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=1 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 2.8e-56
Identity = 105/263 (39.92%), Postives = 171/263 (65.02%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTVDKH-SVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDTG ++G  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTGLQHGRM 216

Query: 141 TIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  + +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLMNDNV 260
           +  +  R+   +  + +Y  +V+ G V  DNT+GR+L   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Sed0009807 vs. ExPASy Swiss-Prot
Match: O00303 (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=EIF3F PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.6e-56
Identity = 105/263 (39.92%), Postives = 170/263 (64.64%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 93  RLHPVILASIVDSYERRNEGAARVIGTLLGTVDKH-SVEVTNCFSVPHNESEDEVAVDME 152

Query: 81  YHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  +NG  
Sbjct: 153 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 212

Query: 141 TIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  + +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 213 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 272

Query: 201 MESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLMNDNV 260
           +  +  R+   +  + +Y  +V+ G V  DNT+GR+L   V  +PK+ P  F+ ++N N+
Sbjct: 273 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 332

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 333 NDLLMVTYLANLTQSQIALNEKL 354

[Close]

BLAST of Sed0009807 vs. ExPASy Swiss-Prot
Match: Q4R5B8 (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9541 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.6e-56
Identity = 105/263 (39.92%), Postives = 170/263 (64.64%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTVDKH-SVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  +NG  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 216

Query: 141 TIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  + +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLMNDNV 260
           +  +  R+   +  + +Y  +V+ G V  DNT+GR+L   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Sed0009807 vs. ExPASy Swiss-Prot
Match: A5A6I3 (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.6e-56
Identity = 105/263 (39.92%), Postives = 170/263 (64.64%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTVDKH-SVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  +NG  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 216

Query: 141 TIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  + +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLMNDNV 260
           +  +  R+   +  + +Y  +V+ G V  DNT+GR+L   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Sed0009807 vs. ExPASy TrEMBL
Match: A0A6J1JSB7 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita maxima OX=3661 GN=LOC111487392 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.6e-150
Identity = 270/285 (94.74%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTENTVLQFSQSS +LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTENTVLQFSQSSNSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REV+NPIHLTVDTGFKNGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVSNPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTS+DKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVEPDNTIGR+LA+ VASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEPDNTIGRFLAETVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQL LAEKLNTAAQIL
Sbjct: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLGLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. ExPASy TrEMBL
Match: A0A6J1E2J8 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=3662 GN=LOC111430001 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 9.9e-150
Identity = 270/285 (94.74%), Postives = 280/285 (98.25%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTE+TVLQFSQSS +LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REV+NPIHLTVDTGFKNGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVSNPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTS+DKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVEPDNTIGR+LA+ VASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEPDNTIGRFLAETVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. ExPASy TrEMBL
Match: A0A6J1FKR8 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=3662 GN=LOC111445113 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.8e-149
Identity = 270/285 (94.74%), Postives = 278/285 (97.54%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTE+TVLQFSQSS TLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRM+EAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMIEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTSVDKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVE DNTIGR+LAD VASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSP+AFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. ExPASy TrEMBL
Match: A0A5A7UIS5 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G002360 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.9e-149
Identity = 271/285 (95.09%), Postives = 277/285 (97.19%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTE TVLQFSQSS TLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTSVDKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVE DNTIGR+LAD VASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSP+AFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. ExPASy TrEMBL
Match: A0A1S3B471 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo OX=3656 GN=LOC103485557 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.9e-149
Identity = 271/285 (95.09%), Postives = 277/285 (97.19%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSITLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSPDGTVDI 60
           MATTE TVLQFSQSS TLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSV PDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYIS NLSL D+QLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLP 240
           LKTTSVDKLPNDLEGME+SMERLLALIDDIYKYV+NVVEGHVE DNTIGR+LAD VASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSP+AFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Sed0009807 vs. TAIR 10
Match: AT2G39990.1 (eukaryotic translation initiation factor 2 )

HSP 1 Score: 449.1 bits (1154), Expect = 2.6e-126
Identity = 220/291 (75.60%), Postives = 253/291 (86.94%), Query Frame = 0


Query: 2   ATTENTVLQFSQSSIT-------LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVSP 61
           AT+E+T+LQF   S T       L+A++HPLVIFN+CDC+VRRPD A+RVIGTLLGS+ P
Sbjct: 3   ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILP 62

Query: 62  DGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSAL 121
           DGTVDIRNSYAVPHNE SDQVA+DIDYHHNML SH KVN KE IVGWYSTG GV GGS+L
Sbjct: 63  DGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSL 122

Query: 122 IHEFYSREVANPIHLTVDTGFKNGEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAE 181
           IH+FY+REV NPIHLTVDTGF NGEGTIKA++S NLSL D+QL A FQEIP+DLRMV+AE
Sbjct: 123 IHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAE 182

Query: 182 RLGFDILKTTSVDKLPNDLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLAD 241
           R+GFD+LK TSVDKLPNDLEGME +MERLL LI+D+YKYV++VV G + PDN IGR++AD
Sbjct: 183 RVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIAD 242

Query: 242 AVASLPKLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           AVASLPKL P  FD L+ND++QD LLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 243 AVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293

[Close]

BLAST of Sed0009807 vs. TAIR 10
Match: AT3G11270.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-31
Identity = 87/266 (32.71%), Postives = 141/266 (53.01%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS S  GTVD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFL 78

Query: 82  DIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKN 141
           D +YH +M +  +++N KE IVGWYSTG  +      +H  ++  V NP+ + +D   K 
Sbjct: 79  DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDIL----KTTSVDKLPNDL 201
                KAY +   + + K     F  +P ++   E E +G + L    K T++  L  ++
Sbjct: 139 LGIPTKAYYAVEENATQKSQQV-FVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLATEV 198

Query: 202 EGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLMND 261
               ++++ L A + +I  Y++ V+EG +  ++ I  +L D    LP L+ +   K    
Sbjct: 199 TAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFAV 258

Query: 262 NVQDHLLLLYLSSITRTQLSLAEKLN 280
              D +L++YLSS+ R+ ++L   +N
Sbjct: 259 KTNDMMLVIYLSSLIRSVIALHSLIN 282

[Close]

BLAST of Sed0009807 vs. TAIR 10
Match: AT3G11270.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 131.7 bits (330), Expect = 9.2e-31
Identity = 87/268 (32.46%), Postives = 141/268 (52.61%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS S  GTVD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFL 78

Query: 82  DIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKN 141
           D +YH +M +  +++N KE IVGWYSTG  +      +H  ++  V NP+ + +D   K 
Sbjct: 79  DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISFNLSLSDKQLAAQ--FQEIPLDLRMVEAERLGFDIL----KTTSVDKLPN 201
                KAY +      +    +Q  F  +P ++   E E +G + L    K T++  L  
Sbjct: 139 LGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 198

Query: 202 DLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLM 261
           ++    ++++ L A + +I  Y++ V+EG +  ++ I  +L D    LP L+ +   K  
Sbjct: 199 EVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 258

Query: 262 NDNVQDHLLLLYLSSITRTQLSLAEKLN 280
                D +L++YLSS+ R+ ++L   +N
Sbjct: 259 AVKTNDMMLVIYLSSLIRSVIALHSLIN 285

[Close]

BLAST of Sed0009807 vs. TAIR 10
Match: AT5G05780.2 (RP non-ATPase subunit 8A )

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-30
Identity = 84/266 (31.58%), Postives = 140/266 (52.63%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS S  G VD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFL 78

Query: 82  DIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKN 141
           D +YH +M +  +++N KE +VGWYSTG  +      +H  ++  V NP+ + +D   K 
Sbjct: 79  DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISFNLSLSDKQLAAQFQEIPLDLRMVEAERLGFDIL----KTTSVDKLPNDL 201
                KAY +   + + K     F  +  ++   E E +G + L    K T++  L  ++
Sbjct: 139 LGIPTKAYYAVEENATQKSQKV-FVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEV 198

Query: 202 EGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLMND 261
               ++++ L A + +I  Y++ V+EG +  ++ I  +L D    LP L+ +   K  + 
Sbjct: 199 TAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSV 258

Query: 262 NVQDHLLLLYLSSITRTQLSLAEKLN 280
              D +L++YLSS+ R+ ++L   +N
Sbjct: 259 KTNDMMLVIYLSSLIRSVIALHNLIN 282

[Close]

BLAST of Sed0009807 vs. TAIR 10
Match: AT5G05780.1 (RP non-ATPase subunit 8A )

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-29
Identity = 84/268 (31.34%), Postives = 140/268 (52.24%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVSPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS S  G VD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFL 78

Query: 82  DIDYHHNMLNSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYSREVANPIHLTVDTGFKN 141
           D +YH +M +  +++N KE +VGWYSTG  +      +H  ++  V NP+ + +D   K 
Sbjct: 79  DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISFNLSLSDKQLAAQ--FQEIPLDLRMVEAERLGFDIL----KTTSVDKLPN 201
                KAY +      +    +Q  F  +  ++   E E +G + L    K T++  L  
Sbjct: 139 LGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 198

Query: 202 DLEGMESSMERLLALIDDIYKYVNNVVEGHVEPDNTIGRYLADAVASLPKLSPSAFDKLM 261
           ++    ++++ L A + +I  Y++ V+EG +  ++ I  +L D    LP L+ +   K  
Sbjct: 199 EVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 258

Query: 262 NDNVQDHLLLLYLSSITRTQLSLAEKLN 280
           +    D +L++YLSS+ R+ ++L   +N
Sbjct: 259 SVKTNDMMLVIYLSSLIRSVIALHNLIN 285

The following BLAST results are available for this feature:

BLAST of Sed0009807 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990544.1	1.6e-149	94.74	eukaryotic translation initiation factor 3 subunit F-like [Cucurbita maxima]	[more]
XP_022921866.1	2.0e-149	94.74	eukaryotic translation initiation factor 3 subunit F [Cucurbita moschata] >XP_02...	[more]
XP_022939113.1	7.8e-149	94.74	eukaryotic translation initiation factor 3 subunit F-like [Cucurbita moschata]	[more]
XP_008441439.1	1.0e-148	95.09	PREDICTED: eukaryotic translation initiation factor 3 subunit F [Cucumis melo] >...	[more]
XP_038884110.1	1.0e-148	95.09	eukaryotic translation initiation factor 3 subunit F [Benincasa hispida]	[more]

BLAST of Sed0009807 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04202	3.7e-125	75.60	Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana OX=...	[more]
Q9DCH4	2.8e-56	39.92	Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN...	[more]
O00303	3.6e-56	39.92	Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=...	[more]
Q4R5B8	3.6e-56	39.92	Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9...	[more]
A5A6I3	3.6e-56	39.92	Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 ...	[more]

BLAST of Sed0009807 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSB7	7.6e-150	94.74	Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E2J8	9.9e-150	94.74	Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=36...	[more]
A0A6J1FKR8	3.8e-149	94.74	Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=36...	[more]
A0A5A7UIS5	4.9e-149	95.09	Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo var. makuwa...	[more]
A0A1S3B471	4.9e-149	95.09	Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Sed0009807 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39990.1	2.6e-126	75.60	eukaryotic translation initiation factor 2	[more]
AT3G11270.2	1.8e-31	32.71	Mov34/MPN/PAD-1 family protein	[more]
AT3G11270.1	9.2e-31	32.46	Mov34/MPN/PAD-1 family protein	[more]
AT5G05780.2	3.5e-30	31.58	RP non-ATPase subunit 8A	[more]
AT5G05780.1	1.7e-29	31.34	RP non-ATPase subunit 8A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 19..150 e-value: 6.9E-29 score: 112.0
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 19..121 e-value: 3.3E-22 score: 78.7
IPR024969	Rpn11/EIF3F, C-terminal	PFAM	PF13012	MitMem_reg	coord: 172..278 e-value: 3.1E-24 score: 85.5
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 7..186 e-value: 5.5E-49 score: 167.9
None	No IPR available	PANTHER	PTHR10540	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED	coord: 16..284
IPR027531	Eukaryotic translation initiation factor 3 subunit F	PANTHER	PTHR10540:SF6	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F	coord: 16..284
IPR027531	Eukaryotic translation initiation factor 3 subunit F	HAMAP	MF_03005	eIF3f	coord: 18..281 score: 37.141457
IPR027531	Eukaryotic translation initiation factor 3 subunit F	CDD	cd08064	MPN_eIF3f	coord: 21..278 e-value: 2.7487E-133 score: 376.161
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 20..151 score: 28.076847

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009807.1	Sed0009807.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0006508	proteolysis
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0031369	translation initiation factor binding
molecular_function	GO:0005515	protein binding