Sed0009732 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCAAACCTATAACCTTGAGATTGTTGGTTCAAGATGTCGGTTGAGTTTGGTTCATTTTGGATCTTATGTCATTCTTCTTTTTTTTTTTTTTTTTTTTTGAAATTGATCTTGTGGCATTCTTGACCACTAAATTACTCCATTGTAGTTTAAATGAAGATCTTATGTTCTTTTTTATACATGTGAGTATATGGGTCGGTTTATTCCCACCTCAACTTTTCTCATGTGATATATGAACCCTATAAAATTTGGATTGAACCCATATAACCTTACAATATTGGGATGATGTTTGGAAAACATACAAATATGATCACTTTTTTAAAAAATTTGCAACAAGTATTAATGAGTAATGTTACATACTTTCTTATAATACTGTATAAATGAATATGTAGAATACAATATTAACACGTATTAATGACTATGGATGCAATATTTTAAAATTTGCCTACATTTGTAATTATTTTATGAGAAGAGCTCATCCAATATAATTTTCCTTTATTTATTTACGGAATTCTTGACCACTAAATCACTCCAAGATATTTTAATAGTTTAATGTAAGATGTTATGTTTGTAAATTTTTTTTTTTATTGGTTTGATTGTTTGTGGTAGGAAAAGGGTCTGATCATATCTCCCTCTATTTGGTATCTGCTGAGGACAAGGTTTTATCTTCTAATTCAGTGGTCAATGCTGTGTTTACCTTTCTGGTTTATGATAATCTCAACGACAGGTACTTGACAATCCAAGGTAACCAAATCCAAACACATGTTTTTTTTAATAAGTTTTTTTTTCTTTCTATGATGTTTTGTAAATTGATTACAGGTTAAAATGTAAATTTAGTCTTTGACGGTTCTTCATGTTTATAGATAATCGTCTCTGACCTTTAAAAGTGTTTAATAGGTCATTGAACTCTTATTGTTGTGTCTAGCAATTTTTTTTTTTCAAATCTGTGACTGTCTGGGCCAGCTTGCGCGCACCTCGACTAATGTCACGGGGCACACCGCTTGACCCTACAACATTTGGATGACAACCCATAGGAAATTAATTCCTAGGTAGGTGGCCACCATGAGGATTGAACTCATCACCTTATGCACCCCAAGACCCTCTTTGATCAATTGAGCCACCCCATAATGGTTGTGTCTAGCATATTTGATCAAGTAGAGTATAACGTTCTAGTATTTGAAAAGAATGAGTTGAATCCATAATGACCGCCTGCGTAAAATAAGTAATCTTGACAACTAAATGTTGTAAGGTTAGACGCTTGAATGAAAAATAGTTCCGTAACATATTCATTTTTTTCAAAGTTAAGTAACCTATTATGCATACAATTGAACTTTGTGTATAACAGGTTTTTAAACTTTCAAACTTTAAAAAAGTCATACATGTAGGATACATGATTAAAAGTCAAAAGTGAGAATAACTCAACGGTACAATTACATCCCCTCAAGCCTCAACTAAGAAGTAAGGGGTTCGAATTCCTACCCCTAACATTGTTAATGTTGTTGAACTAAAAAAATATATAATTACTTATTCGACATGTAGTAATTTGTCGCTTAATCGTGATTTTATTCAGATGGGAAAATGAGAGGTTTTCATGCGATAAAGGCAGAGTGGGGGTTTGAAAAGTTGATTTCACTTGCCAGTTTCAATGCTGCTTCAAATGGATTCTTGGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTGTAAAGAAAGGTGATGAATGGGAGGGGGATGTTCTTTCCTTAGTAAAGCAACCAACAAATCACAAATATACCTGGAGCATCAATAACTTTTCACAACTACCTCATAACACTACTAAGTTTTCTGATCCGTTTACCGTGGAGAGCTATCGATGGTATGCAAAATTTTGATCTACAAACACTTTTTAATATAAGAAACGAAAACTATTTCATCTATAGAATGAAAGAGTTATAGAGGAGAGGATTACATTGATGCTGAAGTTTGGACATGAACATATCTATCTTTCAAGAAACTCCGTCTCGATTATCCTAAAACAAAGAATGGATTTTTTTCATTGTACCTGGCCTTTGATGGTTTGGAAGACCTTCCCCAAACTTCAAAGGTGTATGCTGAATATGAATTTGCTGTGTTGAGTCAACTTGATGAAGTTGCACCATTTACAAGAACATGTAATTAGCAACCCTTTTAATCATTGTAATTTCTGAAGCTTTTCCTTCAAATCTTTGTTCTCAACAGTGTAAGTTGGTTTTTGTGTGTGTGTGTGTGCAGATAGCTGTTGGTTTGAGCTTGATAGCAAAGAATATGCTTGGGGTACTCTAAATCTTATGTCGTTGTGCGATCTCAAGGAATCGACCAAAGGCTTTATTCTGAATGATACCTTGATTATTGAAGTGAAGATTAATGTTATCTCCACCTGGAAAGAGTTTCTGTAG ATGGGTCAAACCTATAACCTTGAGATTTTTTTTTTTCTTTCTATGATGTTTTGTAAATTGATTACAGATGGGAAAATGAGAGGTTTTCATGCGATAAAGGCAGAGTGGGGGTTTGAAAAGTTGATTTCACTTGCCAGTTTCAATGCTGCTTCAAATGGATTCTTGGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTGTAAAGAAAGGTGATGAATGGGAGGGGGATGTTCTTTCCTTAGTAAAGCAACCAACAAATCACAAATATACCTGGAGCATCAATAACTTTTCACAACTACCTCATAACACTACTAAGTTTTCTGATCCGTTTACCAAACTCCGTCTCGATTATCCTAAAACAAAGAATGGATTTTTTTCATTGTACCTGGCCTTTGATGGTTTGGAAGACCTTCCCCAAACTTCAAAGGTGTATGCTGAATATGAATTTGCTGTGTTGAGTCAACTTGATGAAGTTGCACCATTTACAAGAACATATAGCTGTTGGTTTGAGCTTGATAGCAAAGAATATGCTTGGGGTACTCTAAATCTTATGTCGTTGTGCGATCTCAAGGAATCGACCAAAGGCTTTATTCTGAATGATACCTTGATTATTGAAGTGAAGATTAATGTTATCTCCACCTGGAAAGAGTTTCTGTAG ATGGGTCAAACCTATAACCTTGAGATTTTTTTTTTTCTTTCTATGATGTTTTGTAAATTGATTACAGATGGGAAAATGAGAGGTTTTCATGCGATAAAGGCAGAGTGGGGGTTTGAAAAGTTGATTTCACTTGCCAGTTTCAATGCTGCTTCAAATGGATTCTTGGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTGTAAAGAAAGGTGATGAATGGGAGGGGGATGTTCTTTCCTTAGTAAAGCAACCAACAAATCACAAATATACCTGGAGCATCAATAACTTTTCACAACTACCTCATAACACTACTAAGTTTTCTGATCCGTTTACCAAACTCCGTCTCGATTATCCTAAAACAAAGAATGGATTTTTTTCATTGTACCTGGCCTTTGATGGTTTGGAAGACCTTCCCCAAACTTCAAAGGTGTATGCTGAATATGAATTTGCTGTGTTGAGTCAACTTGATGAAGTTGCACCATTTACAAGAACATATAGCTGTTGGTTTGAGCTTGATAGCAAAGAATATGCTTGGGGTACTCTAAATCTTATGTCGTTGTGCGATCTCAAGGAATCGACCAAAGGCTTTATTCTGAATGATACCTTGATTATTGAAGTGAAGATTAATGTTATCTCCACCTGGAAAGAGTTTCTGTAG MGQTYNLEIFFFLSMMFCKLITDGKMRGFHAIKAEWGFEKLISLASFNAASNGFLVDDCCAFGVDIFVKKGDEWEGDVLSLVKQPTNHKYTWSINNFSQLPHNTTKFSDPFTKLRLDYPKTKNGFFSLYLAFDGLEDLPQTSKVYAEYEFAVLSQLDEVAPFTRTYSCWFELDSKEYAWGTLNLMSLCDLKESTKGFILNDTLIIEVKINVISTWKEFL Homology
BLAST of Sed0009732 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 5.0e-55 Identity = 121/211 (57.35%), Postives = 144/211 (68.25%), Query Frame = 0
BLAST of Sed0009732 vs. NCBI nr
Match: XP_031742213.1 (MATH domain and coiled-coil domain-containing protein At3g58340 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 8.9e-52 Identity = 112/211 (53.08%), Postives = 143/211 (67.77%), Query Frame = 0
BLAST of Sed0009732 vs. NCBI nr
Match: KAE8648447.1 (hypothetical protein Csa_008888 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 8.9e-52 Identity = 112/211 (53.08%), Postives = 143/211 (67.77%), Query Frame = 0
BLAST of Sed0009732 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida]) HSP 1 Score: 203.4 bits (516), Expect = 2.0e-48 Identity = 112/208 (53.85%), Postives = 139/208 (66.83%), Query Frame = 0
BLAST of Sed0009732 vs. NCBI nr
Match: XP_008465935.1 (PREDICTED: uncharacterized protein LOC103503506 [Cucumis melo]) HSP 1 Score: 202.2 bits (513), Expect = 4.6e-48 Identity = 108/209 (51.67%), Postives = 140/209 (66.99%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q9M2J6 (MATH domain and coiled-coil domain-containing protein At3g58200 OS=Arabidopsis thaliana OX=3702 GN=At3g58200 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09 Identity = 46/138 (33.33%), Postives = 69/138 (50.00%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 7.4e-09 Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q9M2I9 (MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis thaliana OX=3702 GN=At3g58270 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08 Identity = 46/133 (34.59%), Postives = 71/133 (53.38%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q84WU2 (Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-08 Identity = 43/136 (31.62%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06 Identity = 44/137 (32.12%), Postives = 66/137 (48.18%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A1S3CQ20 (uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 2.2e-48 Identity = 108/209 (51.67%), Postives = 140/209 (66.99%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 3.9e-45 Identity = 105/197 (53.30%), Postives = 129/197 (65.48%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 3.3e-44 Identity = 105/208 (50.48%), Postives = 136/208 (65.38%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A6J1CZ69 (ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=LOC111015609 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 2.1e-38 Identity = 100/198 (50.51%), Postives = 124/198 (62.63%), Query Frame = 0
BLAST of Sed0009732 vs. ExPASy TrEMBL
Match: A0A6J1CX50 (uncharacterized protein LOC111015613 OS=Momordica charantia OX=3673 GN=LOC111015613 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 6.7e-37 Identity = 103/237 (43.46%), Postives = 133/237 (56.12%), Query Frame = 0
BLAST of Sed0009732 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein ) HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24 Identity = 65/201 (32.34%), Postives = 105/201 (52.24%), Query Frame = 0
BLAST of Sed0009732 vs. TAIR 10
Match: AT3G20360.1 (TRAF-like family protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.8e-19 Identity = 72/212 (33.96%), Postives = 102/212 (48.11%), Query Frame = 0
BLAST of Sed0009732 vs. TAIR 10
Match: AT5G26260.1 (TRAF-like family protein ) HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16 Identity = 57/203 (28.08%), Postives = 106/203 (52.22%), Query Frame = 0
BLAST of Sed0009732 vs. TAIR 10
Match: AT3G20370.1 (TRAF-like family protein ) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15 Identity = 58/209 (27.75%), Postives = 103/209 (49.28%), Query Frame = 0
BLAST of Sed0009732 vs. TAIR 10
Match: AT5G26280.1 (TRAF-like family protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14 Identity = 56/203 (27.59%), Postives = 102/203 (50.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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