Sed0009487 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAACGATCCATTTTCATTCACTCACAAACTCAAATCCTCAATCCGTTGTTTCCATTTCAATCACAGCGATTTTTCCGAAAGCGAAGCCGATGAATCTTCTCCACGAACTCCTAAATCGCCTCTCAAATCCATGGCCGCCGCCGCCGCAGAGTGCCGGAACCTCGTCGCTAAGATCGGCCGGAGTCGCCGCCGGTACCACCACTCCGCCGATTTCCGATACGATCCTTCCAGCTATGCGCTTAATTTCGAGGACGATCGAGTTCGCGATGATGATTATGAGTTTCCGATTAGGGATTTCGCTTCGAGGTTGCCGGCGTCTCCGCCGTCTACATGA ATGTTGAACGATCCATTTTCATTCACTCACAAACTCAAATCCTCAATCCGTTGTTTCCATTTCAATCACAGCGATTTTTCCGAAAGCGAAGCCGATGAATCTTCTCCACGAACTCCTAAATCGCCTCTCAAATCCATGGCCGCCGCCGCCGCAGAGTGCCGGAACCTCGTCGCTAAGATCGGCCGGAGTCGCCGCCGGTACCACCACTCCGCCGATTTCCGATACGATCCTTCCAGCTATGCGCTTAATTTCGAGGACGATCGAGTTCGCGATGATGATTATGAGTTTCCGATTAGGGATTTCGCTTCGAGGTTGCCGGCGTCTCCGCCGTCTACATGA ATGTTGAACGATCCATTTTCATTCACTCACAAACTCAAATCCTCAATCCGTTGTTTCCATTTCAATCACAGCGATTTTTCCGAAAGCGAAGCCGATGAATCTTCTCCACGAACTCCTAAATCGCCTCTCAAATCCATGGCCGCCGCCGCCGCAGAGTGCCGGAACCTCGTCGCTAAGATCGGCCGGAGTCGCCGCCGGTACCACCACTCCGCCGATTTCCGATACGATCCTTCCAGCTATGCGCTTAATTTCGAGGACGATCGAGTTCGCGATGATGATTATGAGTTTCCGATTAGGGATTTCGCTTCGAGGTTGCCGGCGTCTCCGCCGTCTACATGA MLNDPFSFTHKLKSSIRCFHFNHSDFSESEADESSPRTPKSPLKSMAAAAAECRNLVAKIGRSRRRYHHSADFRYDPSSYALNFEDDRVRDDDYEFPIRDFASRLPASPPST Homology
BLAST of Sed0009487 vs. NCBI nr
Match: XP_022981208.1 (uncharacterized protein LOC111480417 [Cucurbita maxima]) HSP 1 Score: 169.9 bits (429), Expect = 1.3e-38 Identity = 93/118 (78.81%), Postives = 102/118 (86.44%), Query Frame = 0
BLAST of Sed0009487 vs. NCBI nr
Match: XP_023523424.1 (uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 167.9 bits (424), Expect = 4.9e-38 Identity = 92/118 (77.97%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of Sed0009487 vs. NCBI nr
Match: KAG7031776.1 (hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 167.2 bits (422), Expect = 8.3e-38 Identity = 92/118 (77.97%), Postives = 100/118 (84.75%), Query Frame = 0
BLAST of Sed0009487 vs. NCBI nr
Match: XP_022940408.1 (uncharacterized protein LOC111446022 [Cucurbita moschata] >KAG6608139.1 hypothetical protein SDJN03_01481, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 167.2 bits (422), Expect = 8.3e-38 Identity = 92/118 (77.97%), Postives = 100/118 (84.75%), Query Frame = 0
BLAST of Sed0009487 vs. NCBI nr
Match: XP_022138148.1 (uncharacterized protein LOC111009386 [Momordica charantia]) HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32 Identity = 80/114 (70.18%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of Sed0009487 vs. ExPASy TrEMBL
Match: A0A6J1J1H3 (uncharacterized protein LOC111480417 OS=Cucurbita maxima OX=3661 GN=LOC111480417 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.2e-39 Identity = 93/118 (78.81%), Postives = 102/118 (86.44%), Query Frame = 0
BLAST of Sed0009487 vs. ExPASy TrEMBL
Match: A0A6J1FP70 (uncharacterized protein LOC111446022 OS=Cucurbita moschata OX=3662 GN=LOC111446022 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.0e-38 Identity = 92/118 (77.97%), Postives = 100/118 (84.75%), Query Frame = 0
BLAST of Sed0009487 vs. ExPASy TrEMBL
Match: A0A6J1CC83 (uncharacterized protein LOC111009386 OS=Momordica charantia OX=3673 GN=LOC111009386 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.5e-32 Identity = 80/114 (70.18%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of Sed0009487 vs. ExPASy TrEMBL
Match: A0A0A0L4E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652740 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.1e-23 Identity = 71/112 (63.39%), Postives = 81/112 (72.32%), Query Frame = 0
BLAST of Sed0009487 vs. ExPASy TrEMBL
Match: A0A5A7VBS3 (DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00970 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.7e-23 Identity = 69/110 (62.73%), Postives = 83/110 (75.45%), Query Frame = 0
BLAST of Sed0009487 vs. TAIR 10
Match: AT5G35090.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 3.0e-09 Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Sed0009487 vs. TAIR 10
Match: AT5G11070.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08 Identity = 43/121 (35.54%), Postives = 55/121 (45.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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