Sed0009431 (gene) Chayote v1

Overview


Name	Sed0009431
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ribosomal RNA processing protein 1 homolog
Location	LG11: 6965348 .. 6967519 (-)
RNA-Seq Expression	Sed0009431
Synteny	Sed0009431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAATGAGTTGAGCTTTATGTTTTTTGAAAAGACGAGCGGCTTGAGTTAAAGCCCTAAGAGAACCCCAAATACCATCTAGGGTTCCTTCAACGCGATACAGAGCAGCCCAAAATTCTCCAACCGCCGCCGTTTATCCTTCACGGAATTGAATAATCCAAATTCCATCGAATTCAATCCTTTCTCCTCACACCCATCTCCCCTCTCAACCCAATTCATCGTTTCCATTTTGATTCCTCCCTCATTTCCAAATCCGAATCCGAACGAGCAAGCTTTTCCGGTGTAAAAATGGAGGATGTAGCAATTGAAGGAGATCAGGATTTCACTTCACTGATCAAGCTCTTGGCGTCGACCAACAATGCCACCCGAGACAAAACCCTCCGTGTCATCGTCAAGACATGGCTTCCAACTCAAACGATCCTCTCCGATGGCGATATGAGGAAGCTTTGGAAGGGTTTGTTCTACTGCGTTTGGCATGCAGATAAGCTCCCTGTTCAATCCGAGCTTGTGAATCGCCTCGCTTCTTTGCTCCTTCATCTCGATTTGGATCTTGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACCATGCGCCGAGAATGGGCTGGAATTGATGCGCTCAGGTTAGATAAGTTTTATCTTCTCATTCGTAGATTTATGCATCAGTTTTTTGCGTTAATGAAGAAGCATGGTTGGGATTTGGAGCTGTGTTCTCGTTTGATTCGTGTTTTGGAAGAAAGGGTTTTGTTTAGTGAGGATATGTTTCATGGGAATGGCGTTAATTATCAAATTGCTTCTGTGTTTCTCGAGGAACTTAGGCCGTTTCTTCCTCTTGGGAAGGAAGTTATTGATACCCTGTTTAAGCCTTTCGTTTTGTCCTTGGCGAAACTGCCTGACAAAGTGTTGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGTTGCTTCGAACGGGGAAGCGGTTGCTTGAGTGTCGAAAATGTGGAGAGGATGTTGATTCTGGTGATGATATTGTTGTGTATGGGACGATTTCATTGACGAATCTGTTCTCCTCTACGTTTTATGAATTGGGTTCTTCGACTGATTGCTATCAAGGGAATAGAAAGGTGTTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATTTTATGTCGTCGGGGATCGAGATTTCGATTCCGGATCTTCAAGAGCAAGATGAAGATGAAGTGCCTACTTTGATTCCTCTTTCCGGTGGAGAAGAGGCCCCTTCGGATATTTCGATGGTTGATGTCGATGTCACGGATGAATCCTCTGATAAGGCTCTTAAAAAGAAAAAGAAGAATAAAAAGGCCGCTGATGGAAGTGACAAGAAGAAGACTAAGAAGGATAAGAAGGCCAAGAAGACCGCGAATGGTATTTCTGATCTTGTTTCTGAAAATAAGGACAATGACAATATTGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGGTAACCTTTGATGAATCTGTGATATCAAACCTTCAGATGCAATTCGAGAGGGTTGCTGCTGAAGTTGATTCTGGAGACAATGTTTTGAGCGCTGTGATATCGGCCAATGGCTCGGTCAAGAAAAGGAAGAGAGCAAAGAAGGTCGATGGGAAGCAGACACACGATATGGTACTTCCCAGCCAAGTTGACGACGAAGGAAACACGGCTGCAAAATGTGGAGAGAAAAGTGCAAAGAAGGTAAAATTTTCTATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCACTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCGATCTTGGAGTTCGCTACCACAACTAAAAGAACGAAAAGGAGAGCTGTCGCGGCAAGGGCTAAGAAAAGTGTGAGAGGCTTGCCTGTCAAACATTTGAAGAAATTGAAATCTACGCGTACTTAGAAGCTTTTTGAGATAGGGTATGAAGTTGCAGAGGTCCAAAGGTTACAGTTCTGTTTGTATCATTTAATGATTTTCTTAATTACTTCGTTTCTTTTAGGCTTTGTTGTCATATTTACCTTCATGAACTCAACCATGGAAAATGAATGAAGTTTCTGATGCATTGAGTTGAGAACTTGAAATTGATTACCACC

mRNA sequence

AAAAGAATGAGTTGAGCTTTATGTTTTTTGAAAAGACGAGCGGCTTGAGTTAAAGCCCTAAGAGAACCCCAAATACCATCTAGGGTTCCTTCAACGCGATACAGAGCAGCCCAAAATTCTCCAACCGCCGCCGTTTATCCTTCACGGAATTGAATAATCCAAATTCCATCGAATTCAATCCTTTCTCCTCACACCCATCTCCCCTCTCAACCCAATTCATCGTTTCCATTTTGATTCCTCCCTCATTTCCAAATCCGAATCCGAACGAGCAAGCTTTTCCGGTGTAAAAATGGAGGATGTAGCAATTGAAGGAGATCAGGATTTCACTTCACTGATCAAGCTCTTGGCGTCGACCAACAATGCCACCCGAGACAAAACCCTCCGTGTCATCGTCAAGACATGGCTTCCAACTCAAACGATCCTCTCCGATGGCGATATGAGGAAGCTTTGGAAGGGTTTGTTCTACTGCGTTTGGCATGCAGATAAGCTCCCTGTTCAATCCGAGCTTGTGAATCGCCTCGCTTCTTTGCTCCTTCATCTCGATTTGGATCTTGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACCATGCGCCGAGAATGGGCTGGAATTGATGCGCTCAGGTTAGATAAGTTTTATCTTCTCATTCGTAGATTTATGCATCAGTTTTTTGCGTTAATGAAGAAGCATGGTTGGGATTTGGAGCTGTGTTCTCGTTTGATTCGTGTTTTGGAAGAAAGGGTTTTGTTTAGTGAGGATATGTTTCATGGGAATGGCGTTAATTATCAAATTGCTTCTGTGTTTCTCGAGGAACTTAGGCCGTTTCTTCCTCTTGGGAAGGAAGTTATTGATACCCTGTTTAAGCCTTTCGTTTTGTCCTTGGCGAAACTGCCTGACAAAGTGTTGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGTTGCTTCGAACGGGGAAGCGGTTGCTTGAGTGTCGAAAATGTGGAGAGGATGTTGATTCTGGTGATGATATTGTTGTGTATGGGACGATTTCATTGACGAATCTGTTCTCCTCTACGTTTTATGAATTGGGTTCTTCGACTGATTGCTATCAAGGGAATAGAAAGGTGTTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATTTTATGTCGTCGGGGATCGAGATTTCGATTCCGGATCTTCAAGAGCAAGATGAAGATGAAGTGCCTACTTTGATTCCTCTTTCCGGTGGAGAAGAGGCCCCTTCGGATATTTCGATGGTTGATGTCGATGTCACGGATGAATCCTCTGATAAGGCTCTTAAAAAGAAAAAGAAGAATAAAAAGGCCGCTGATGGAAGTGACAAGAAGAAGACTAAGAAGGATAAGAAGGCCAAGAAGACCGCGAATGGTATTTCTGATCTTGTTTCTGAAAATAAGGACAATGACAATATTGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGGTAACCTTTGATGAATCTGTGATATCAAACCTTCAGATGCAATTCGAGAGGGTTGCTGCTGAAGTTGATTCTGGAGACAATGTTTTGAGCGCTGTGATATCGGCCAATGGCTCGGTCAAGAAAAGGAAGAGAGCAAAGAAGGTCGATGGGAAGCAGACACACGATATGGTACTTCCCAGCCAAGTTGACGACGAAGGAAACACGGCTGCAAAATGTGGAGAGAAAAGTGCAAAGAAGGTAAAATTTTCTATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCACTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCGATCTTGGAGTTCGCTACCACAACTAAAAGAACGAAAAGGAGAGCTGTCGCGGCAAGGGCTAAGAAAAGTGTGAGAGGCTTGCCTGTCAAACATTTGAAGAAATTGAAATCTACGCGTACTTAGAAGCTTTTTGAGATAGGGTATGAAGTTGCAGAGGTCCAAAGGTTACAGTTCTGTTTGTATCATTTAATGATTTTCTTAATTACTTCGTTTCTTTTAGGCTTTGTTGTCATATTTACCTTCATGAACTCAACCATGGAAAATGAATGAAGTTTCTGATGCATTGAGTTGAGAACTTGAAATTGATTACCACC

Coding sequence (CDS)

ATGGAGGATGTAGCAATTGAAGGAGATCAGGATTTCACTTCACTGATCAAGCTCTTGGCGTCGACCAACAATGCCACCCGAGACAAAACCCTCCGTGTCATCGTCAAGACATGGCTTCCAACTCAAACGATCCTCTCCGATGGCGATATGAGGAAGCTTTGGAAGGGTTTGTTCTACTGCGTTTGGCATGCAGATAAGCTCCCTGTTCAATCCGAGCTTGTGAATCGCCTCGCTTCTTTGCTCCTTCATCTCGATTTGGATCTTGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACCATGCGCCGAGAATGGGCTGGAATTGATGCGCTCAGGTTAGATAAGTTTTATCTTCTCATTCGTAGATTTATGCATCAGTTTTTTGCGTTAATGAAGAAGCATGGTTGGGATTTGGAGCTGTGTTCTCGTTTGATTCGTGTTTTGGAAGAAAGGGTTTTGTTTAGTGAGGATATGTTTCATGGGAATGGCGTTAATTATCAAATTGCTTCTGTGTTTCTCGAGGAACTTAGGCCGTTTCTTCCTCTTGGGAAGGAAGTTATTGATACCCTGTTTAAGCCTTTCGTTTTGTCCTTGGCGAAACTGCCTGACAAAGTGTTGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGTTGCTTCGAACGGGGAAGCGGTTGCTTGAGTGTCGAAAATGTGGAGAGGATGTTGATTCTGGTGATGATATTGTTGTGTATGGGACGATTTCATTGACGAATCTGTTCTCCTCTACGTTTTATGAATTGGGTTCTTCGACTGATTGCTATCAAGGGAATAGAAAGGTGTTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATTTTATGTCGTCGGGGATCGAGATTTCGATTCCGGATCTTCAAGAGCAAGATGAAGATGAAGTGCCTACTTTGATTCCTCTTTCCGGTGGAGAAGAGGCCCCTTCGGATATTTCGATGGTTGATGTCGATGTCACGGATGAATCCTCTGATAAGGCTCTTAAAAAGAAAAAGAAGAATAAAAAGGCCGCTGATGGAAGTGACAAGAAGAAGACTAAGAAGGATAAGAAGGCCAAGAAGACCGCGAATGGTATTTCTGATCTTGTTTCTGAAAATAAGGACAATGACAATATTGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGGTAACCTTTGATGAATCTGTGATATCAAACCTTCAGATGCAATTCGAGAGGGTTGCTGCTGAAGTTGATTCTGGAGACAATGTTTTGAGCGCTGTGATATCGGCCAATGGCTCGGTCAAGAAAAGGAAGAGAGCAAAGAAGGTCGATGGGAAGCAGACACACGATATGGTACTTCCCAGCCAAGTTGACGACGAAGGAAACACGGCTGCAAAATGTGGAGAGAAAAGTGCAAAGAAGGTAAAATTTTCTATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCACTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCGATCTTGGAGTTCGCTACCACAACTAAAAGAACGAAAAGGAGAGCTGTCGCGGCAAGGGCTAAGAAAAGTGTGAGAGGCTTGCCTGTCAAACATTTGAAGAAATTGAAATCTACGCGTACTTAG

Protein sequence

MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYCVWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLPLGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDIVVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQEQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKDKKAKKTANGISDLVSENKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQFERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEKSAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKRRAVAARAKKSVRGLPVKHLKKLKSTRT

Homology

[Close]

BLAST of Sed0009431 vs. NCBI nr
Match: XP_022149903.1 (ribosomal RNA processing protein 1 homolog [Momordica charantia])

HSP 1 Score: 889.4 bits (2297), Expect = 1.6e-254
Identity = 473/569 (83.13%), Postives = 511/569 (89.81%), Query Frame = 0


Query: 1   MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYC 60
           ME++ +EGDQDFTSLIK LAS+N ATRDKTLR+IVKTWLP QT LSDGDM+KLWKGLFYC
Sbjct: 1   MEEL-VEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYC 60

Query: 61  VWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120
           VWHADK PVQSEL+NRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR
Sbjct: 61  VWHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120

Query: 121 RFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 180
           RF+HQFFALMKKH WDLELC RLI+VLEERV F++D FHGNGVNY IASVFLEELRPFLP
Sbjct: 121 RFLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLP 180

Query: 181 LGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDI 240
           L KEV+D LFKPF+LS+AKLPDKVL+GKIKSNLFDVLL+ GK+LLE RKCG+DVDSGDDI
Sbjct: 181 LRKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDI 240

Query: 241 VVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQ 300
           VVYGT+SLTNLFSSTFYELGSS +C QGNRKVLFA+HEEYQKLEKDF+SSGIEISIPDL 
Sbjct: 241 VVYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLH 300

Query: 301 EQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGS-DKKKTKK 360
           EQD DEVPTL+P+S  EEAPSDISMVDVDVT+ES+DKALKK+KKNKKA D S  KKK KK
Sbjct: 301 EQDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKK 360

Query: 361 DKKAKKTANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQ 420
            KKAKKT NGISDLVSE    NKDN+NI VANGENSNNEQISDGNM+ FDESVISNLQMQ
Sbjct: 361 AKKAKKTMNGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQ 420

Query: 421 FERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDG-KQTHDMVLPSQVDDEGNTAAKCG 480
           FERVAAE D  D+V+  V+SANGSVKKRKRAK  DG +QTH +VLPSQVD E N AAK G
Sbjct: 421 FERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSG 480

Query: 481 EKSAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRT 540
           EKS KKV+FSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEF   TKRT
Sbjct: 481 EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRT 540

Query: 541 KRRAVAARAKKSVRGLPVKHLKKLKSTRT 564
           KRRAVA R+KK VR LPVK LKKLKS  T
Sbjct: 541 KRRAVAMRSKKGVRSLPVKRLKKLKSKTT 567

[Close]

BLAST of Sed0009431 vs. NCBI nr
Match: XP_008450828.1 (PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa] >TYK14953.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 887.1 bits (2291), Expect = 7.9e-254
Identity = 462/567 (81.48%), Postives = 506/567 (89.24%), Query Frame = 0


Query: 1   MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYC 60
           ME+V +EGDQ+FTSL+KLLAS+N ATRDKTLRVI+KTWLPTQT LSDGDM+KLWKGLFYC
Sbjct: 1   MEEV-VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYC 60

Query: 61  VWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120
           VWHADK+PVQSEL+NRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR
Sbjct: 61  VWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120

Query: 121 RFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 180
           RF+HQFFAL+KKH WDLELC  L++VLEERV F++D FHGNGVNYQIASVFLEELRPFLP
Sbjct: 121 RFLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLP 180

Query: 181 LGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDI 240
           L KEV+D LFKPF+LS+AKLPDKVL GKIKSNLFDV+L+ GK+LLE RK G+D+DSGDD 
Sbjct: 181 LQKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDT 240

Query: 241 VVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQ 300
            VYGTISLTN FS+TFYELGSS DC QGNRKVLFAMHEE+QKLEKDF SSGIEIS PDLQ
Sbjct: 241 AVYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQ 300

Query: 301 EQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKD 360
           EQD DEVPTL+P+   EEAPS+ISMVDVDV  ES+DKALKK+K++KKA DGS KKK KK 
Sbjct: 301 EQDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKA 360

Query: 361 KKAKKTANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQF 420
           KKAKKT NGISDLVSE    NKDN+NIVVANGENSNNEQISDGNM+TFDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEK 480
           E+VAAE D GD+++S VIS NGSVKKRKRAK VD  Q HD+ LPS+   EGNTAAK  EK
Sbjct: 421 EKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEK 480

Query: 481 SAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKR 540
           S KKV+FSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEF  TTKRTKR
Sbjct: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKR 540

Query: 541 RAVAARAKKSVRGLPVKHLKKLKSTRT 564
           RAV+ R KK VR LPVK LKKLKS  T
Sbjct: 541 RAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Sed0009431 vs. NCBI nr
Match: XP_038875379.1 (ribosomal RNA processing protein 1 homolog [Benincasa hispida])

HSP 1 Score: 884.0 bits (2283), Expect = 6.7e-253
Identity = 461/567 (81.31%), Postives = 508/567 (89.59%), Query Frame = 0


Query: 1   MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYC 60
           ME+V +EGDQ+FTSL+KLLAS+N ATRDKTLRVI+KTWLPTQ  LSDGDM+KLWKGLFYC
Sbjct: 1   MEEV-VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQKSLSDGDMKKLWKGLFYC 60

Query: 61  VWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120
           +WHADK+PVQSEL+NRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR
Sbjct: 61  IWHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120

Query: 121 RFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 180
           RF+HQFFAL+KKH WDLELC   ++VLEERV F++D FHGNGVNYQIASVFLEEL+PFLP
Sbjct: 121 RFLHQFFALLKKHSWDLELCRCSVQVLEERVFFADDKFHGNGVNYQIASVFLEELKPFLP 180

Query: 181 LGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDI 240
           L KEVID LFKPF+ S+ KLPDKVLLGKIKSNLFDV+L+ GK+LL+ RKCG+DVDSGDDI
Sbjct: 181 LQKEVIDVLFKPFLCSMVKLPDKVLLGKIKSNLFDVILKMGKQLLDRRKCGDDVDSGDDI 240

Query: 241 VVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQ 300
           VV+GTIS TNLFS+TFYELGSS DC QGNRKVLFAMHEE+QKLEKDF+SSG+EIS+P LQ
Sbjct: 241 VVFGTISFTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFISSGVEISLPGLQ 300

Query: 301 EQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKD 360
           EQD DEVPTL+P+S  EEAPS+ISMVDVDV  +S+DKALKK+KK+KKA D S KKK KK 
Sbjct: 301 EQDGDEVPTLVPVSSEEEAPSEISMVDVDVNADSTDKALKKQKKSKKATDDSGKKKAKKA 360

Query: 361 KKAKKTANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQF 420
           KKAK+T NGISDLVSE    NKDN+NIVVANGENSNNEQISDGNM+TFDE+VISNLQMQF
Sbjct: 361 KKAKETTNGISDLVSENTPVNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEK 480
           ER AAE D  D+  S V+SANGSVKKRKRAK VDG Q H++VL SQVD EGNTAAK  EK
Sbjct: 421 ERAAAEADFEDSFASPVMSANGSVKKRKRAKNVDGSQKHEVVLSSQVDAEGNTAAKSEEK 480

Query: 481 SAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKR 540
           S KKV+FSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEF  TTKRTKR
Sbjct: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKR 540

Query: 541 RAVAARAKKSVRGLPVKHLKKLKSTRT 564
           RAVA RAKK VR LPVK LKKLKS  T
Sbjct: 541 RAVAMRAKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Sed0009431 vs. NCBI nr
Match: XP_023538012.1 (ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 881.7 bits (2277), Expect = 3.3e-252
Identity = 463/562 (82.38%), Postives = 501/562 (89.15%), Query Frame = 0


Query: 6   IEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYCVWHAD 65
           +EGDQDFTSLIKLLAS+N ATRDKTLRVI+KTWLPTQT LSDGDM+KLWKGLFYCVWHAD
Sbjct: 4   VEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHAD 63

Query: 66  KLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQ 125
           KLPVQ+EL+NRLASLLLHL+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRFMHQ
Sbjct: 64  KLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQ 123

Query: 126 FFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLPLGKEV 185
           FFAL+KK+ WDLELC R ++VLEERV F++D FHGNGVNYQIASVFLEELRPFLPLGKEV
Sbjct: 124 FFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEV 183

Query: 186 IDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDIVVYGT 245
           ID LFKPF+LS+AKL DKV+LGKIKSNLFDVLL+ GK+LLE RKCGED++S DDIVVYGT
Sbjct: 184 IDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVYGT 243

Query: 246 ISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQEQDED 305
           I LTNLFSSTFYELGSS DC Q NRKVLFAMHEEYQKLEK F+SSGIEIS+PDLQEQD D
Sbjct: 244 IPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQDGD 303

Query: 306 EVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKDKKAKK 365
           EVPTL+P+S  E     ISM DVDV+DE +DKALKKKKK KK +DGS KKK    KKAKK
Sbjct: 304 EVPTLVPISSEE-----ISMADVDVSDEITDKALKKKKKTKKVSDGSGKKKA---KKAKK 363

Query: 366 TANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQFERVAA 425
             NGISDLVS     NKD++NIVVANGENSNNEQISDGNM+TFDESVISNLQMQFERVAA
Sbjct: 364 NTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAA 423

Query: 426 EVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEKSAKKV 485
           E + GDNV++ VISANGSVKKRKRAKKVD +QTHD+VLP+QVD EGNTAAK GE S KKV
Sbjct: 424 EAEFGDNVMTPVISANGSVKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVKKV 483

Query: 486 KFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKRRAVAA 545
           +FSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEF  TTKRTKRRAV  
Sbjct: 484 RFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVTM 543

Query: 546 RAKKSVRGLPVKHLKKLKSTRT 564
           RAKK VR LPVK LKK KS  T
Sbjct: 544 RAKKGVRSLPVKRLKKPKSKST 557

[Close]

BLAST of Sed0009431 vs. NCBI nr
Match: XP_004150388.1 (ribosomal RNA processing protein 1 homolog [Cucumis sativus])

HSP 1 Score: 880.2 bits (2273), Expect = 9.7e-252
Identity = 463/567 (81.66%), Postives = 503/567 (88.71%), Query Frame = 0


Query: 1   MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYC 60
           ME+V +EGDQ+FTSL+KLLAS+N ATRDKTLRVI+KTWLPTQT LSDGDM+KLWKGLFYC
Sbjct: 1   MEEV-VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYC 60

Query: 61  VWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120
           VWHADK+PVQSEL+NRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR
Sbjct: 61  VWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120

Query: 121 RFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 180
           RF+HQFFAL+KKH WDLELC RL++VLEERV F+ED FHGNGVNYQIASVFLEELRPFLP
Sbjct: 121 RFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLP 180

Query: 181 LGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDI 240
           L KEV+D LFKPF+LS+ KLPDKVLLGKIKSNLFDV+L+ GK+LLE RK G+DVDS DD 
Sbjct: 181 LQKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDT 240

Query: 241 VVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQ 300
           VVYGT+SLTN FS+TFYELGSS DC QGNRKVLFAMHEE+QKLEKDF SSGIEIS PDLQ
Sbjct: 241 VVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQ 300

Query: 301 EQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKD 360
           EQD DEVPTL+P+S  EEAPS+IS+VDVDV  ES+DKALKK+KK+KKA DGS KKK KK 
Sbjct: 301 EQDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKA 360

Query: 361 KKAKKTANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQF 420
           KKAKKT NGISDLVSE    NKDN+NIVVANGENSNNEQISDGNM+TFDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEK 480
           ERVAAE D G + +S VIS NGSVKKRKRAK V   Q HD  LPS+   EGNTAAK  EK
Sbjct: 421 ERVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEK 480

Query: 481 SAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKR 540
           S KKV+FSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEF  TTKRTKR
Sbjct: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKR 540

Query: 541 RAVAARAKKSVRGLPVKHLKKLKSTRT 564
           RAV+ R K  VR LPVK LKKLKS  T
Sbjct: 541 RAVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Sed0009431 vs. ExPASy Swiss-Prot
Match: Q91YK2 (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 2.1e-23
Identity = 77/230 (33.48%), Postives = 120/230 (52.17%), Query Frame = 0


Query: 19  LASTNNATRDKTLRVIVKTWLPTQT-----ILSDGDMRKLWKGLFYCVWHADKLPVQSEL 78
           LAS+    RD+ +R + + +L  +T       S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGVRDRAVRKL-RQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 79  VNRLASLLLHLDLDLAVQYFSV--FLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALMK 138
            N + S L+H+   L  QY  +  F  TM REW GID L+LDK+Y+LIR  + Q F ++K
Sbjct: 76  AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135

Query: 139 KHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLPLGKEVID---- 198
           ++ W+    +  + +L + +L  E     NGV   +  V+LEEL      G E++     
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTV--GGAELLADQNL 195

Query: 199 TLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTG----KRLLECRKCGED 234
            L  PF    AK  D  L+  +   +F+V++       +  +E RK  ED
Sbjct: 196 KLIDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

[Close]

BLAST of Sed0009431 vs. ExPASy Swiss-Prot
Match: Q14684 (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)

HSP 1 Score: 110.9 bits (276), Expect = 4.7e-23
Identity = 73/210 (34.76%), Postives = 109/210 (51.90%), Query Frame = 0


Query: 19  LASTNNATRDKTLR-----VIVKTWLPTQTILSDGDMRKLWKGLFYCVWHADKLPVQSEL 78
           LAS+    RD+ ++     + VKT   T    S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGIRDRAVKKLRQYISVKTQRETGG-FSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 79  VNRLASLLLHLDLDLAVQYF-SVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALMKK 138
            N +A L+  ++   A   F   F  TM REW GID LRLDK+Y+LIR  + Q F ++K+
Sbjct: 76  ANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKR 135

Query: 139 HGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLPLGKEVID----T 198
           +GW+       + VL + VL  E     NGV +    ++L+EL      GKE++      
Sbjct: 136 NGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSKV--GGKELLADQNLK 195

Query: 199 LFKPFVLSLAKLPDKVLLGKIKSNLFDVLL 219
              PF    AK  D  L+  I   +F+ ++
Sbjct: 196 FIDPFCKIAAKTKDHTLVQTIARGVFEAIV 221

[Close]

BLAST of Sed0009431 vs. ExPASy Swiss-Prot
Match: P56183 (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 5.2e-22
Identity = 74/233 (31.76%), Postives = 113/233 (48.50%), Query Frame = 0


Query: 15  LIKLLASTNNATRDKTLRVIVKTWLPTQTILSDG-----DMRKLWKGLFYCVWHADKLPV 74
           L + LA     TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK-PL 72

Query: 75  QSELVNRLASLLLHL--DLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFF 134
           Q E + R  + L+H     +   Q+   F  TM REW GID LRLDKFY+L+R  + +  
Sbjct: 73  QQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESL 132

Query: 135 ALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPF--LPLGKEV 194
             +K  GWD     +L+ +L   +L + D    +GV      +FLEEL       L  + 
Sbjct: 133 KAVKARGWDERQIEQLLELLTTEIL-NPDSQAPSGVKSHFLEIFLEELAKVGAAELTADQ 192

Query: 195 IDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGD 239
                 PF    A+  D  +L KI  ++F  ++      +E      D  SG+
Sbjct: 193 NLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIEDIMNELDTQSGE 242

[Close]

BLAST of Sed0009431 vs. ExPASy Swiss-Prot
Match: P56182 (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.5e-21
Identity = 70/224 (31.25%), Postives = 108/224 (48.21%), Query Frame = 0


Query: 15  LIKLLASTNNATRDKTLRVIVKTWLPTQTILSDG-----DMRKLWKGLFYCVWHADKLPV 74
           L + LA     TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDK-PL 72

Query: 75  QSELVNRLASLLLHLDLDLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFF 134
             E + R  S L+H       Q  +   F  TM REW GID LRLDKFY+L+R  +++  
Sbjct: 73  LQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESL 132

Query: 135 ALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLPLGKEVID 194
            ++K  GW+      L+ +L   +L        NGV      +FLEEL     +G E + 
Sbjct: 133 KVLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEEL---TKVGAEELT 192

Query: 195 T-----LFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLE 227
                    PF    A+  D ++L  I   +F+ ++      +E
Sbjct: 193 ADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE 230

[Close]

BLAST of Sed0009431 vs. ExPASy Swiss-Prot
Match: Q9Y7M6 (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-19
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 16  IKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYCVWHADKLPVQSELVN 75
           IK LA+ +  TRDK L  + + +L  +      D  KLWKGLFYC+W ADK   Q +L +
Sbjct: 8   IKKLAANDRKTRDKALESL-QRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67

Query: 76  RLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALMKKHGW 135
            LA+L+  + +D  + + S F  TM REW GID LR DKFYLL+RRF    F  ++    
Sbjct: 68  NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127

Query: 136 DL---ELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 181
                ++ +   ++  +    +E++   NG+ + +A ++ EELR   P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYP 174

[Close]

BLAST of Sed0009431 vs. ExPASy TrEMBL
Match: A0A6J1D805 (ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC111018204 PE=4 SV=1)

HSP 1 Score: 889.4 bits (2297), Expect = 7.7e-255
Identity = 473/569 (83.13%), Postives = 511/569 (89.81%), Query Frame = 0


Query: 1   MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYC 60
           ME++ +EGDQDFTSLIK LAS+N ATRDKTLR+IVKTWLP QT LSDGDM+KLWKGLFYC
Sbjct: 1   MEEL-VEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYC 60

Query: 61  VWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120
           VWHADK PVQSEL+NRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR
Sbjct: 61  VWHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120

Query: 121 RFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 180
           RF+HQFFALMKKH WDLELC RLI+VLEERV F++D FHGNGVNY IASVFLEELRPFLP
Sbjct: 121 RFLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLP 180

Query: 181 LGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDI 240
           L KEV+D LFKPF+LS+AKLPDKVL+GKIKSNLFDVLL+ GK+LLE RKCG+DVDSGDDI
Sbjct: 181 LRKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDI 240

Query: 241 VVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQ 300
           VVYGT+SLTNLFSSTFYELGSS +C QGNRKVLFA+HEEYQKLEKDF+SSGIEISIPDL 
Sbjct: 241 VVYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLH 300

Query: 301 EQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGS-DKKKTKK 360
           EQD DEVPTL+P+S  EEAPSDISMVDVDVT+ES+DKALKK+KKNKKA D S  KKK KK
Sbjct: 301 EQDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKK 360

Query: 361 DKKAKKTANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQ 420
            KKAKKT NGISDLVSE    NKDN+NI VANGENSNNEQISDGNM+ FDESVISNLQMQ
Sbjct: 361 AKKAKKTMNGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQ 420

Query: 421 FERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDG-KQTHDMVLPSQVDDEGNTAAKCG 480
           FERVAAE D  D+V+  V+SANGSVKKRKRAK  DG +QTH +VLPSQVD E N AAK G
Sbjct: 421 FERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSG 480

Query: 481 EKSAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRT 540
           EKS KKV+FSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEF   TKRT
Sbjct: 481 EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRT 540

Query: 541 KRRAVAARAKKSVRGLPVKHLKKLKSTRT 564
           KRRAVA R+KK VR LPVK LKKLKS  T
Sbjct: 541 KRRAVAMRSKKGVRSLPVKRLKKLKSKTT 567

[Close]

BLAST of Sed0009431 vs. ExPASy TrEMBL
Match: A0A5A7U008 (Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00010 PE=4 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 3.8e-254
Identity = 462/567 (81.48%), Postives = 506/567 (89.24%), Query Frame = 0


Query: 1   MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYC 60
           ME+V +EGDQ+FTSL+KLLAS+N ATRDKTLRVI+KTWLPTQT LSDGDM+KLWKGLFYC
Sbjct: 1   MEEV-VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYC 60

Query: 61  VWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120
           VWHADK+PVQSEL+NRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR
Sbjct: 61  VWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120

Query: 121 RFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 180
           RF+HQFFAL+KKH WDLELC  L++VLEERV F++D FHGNGVNYQIASVFLEELRPFLP
Sbjct: 121 RFLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLP 180

Query: 181 LGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDI 240
           L KEV+D LFKPF+LS+AKLPDKVL GKIKSNLFDV+L+ GK+LLE RK G+D+DSGDD 
Sbjct: 181 LQKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDT 240

Query: 241 VVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQ 300
            VYGTISLTN FS+TFYELGSS DC QGNRKVLFAMHEE+QKLEKDF SSGIEIS PDLQ
Sbjct: 241 AVYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQ 300

Query: 301 EQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKD 360
           EQD DEVPTL+P+   EEAPS+ISMVDVDV  ES+DKALKK+K++KKA DGS KKK KK 
Sbjct: 301 EQDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKA 360

Query: 361 KKAKKTANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQF 420
           KKAKKT NGISDLVSE    NKDN+NIVVANGENSNNEQISDGNM+TFDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEK 480
           E+VAAE D GD+++S VIS NGSVKKRKRAK VD  Q HD+ LPS+   EGNTAAK  EK
Sbjct: 421 EKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEK 480

Query: 481 SAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKR 540
           S KKV+FSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEF  TTKRTKR
Sbjct: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKR 540

Query: 541 RAVAARAKKSVRGLPVKHLKKLKSTRT 564
           RAV+ R KK VR LPVK LKKLKS  T
Sbjct: 541 RAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Sed0009431 vs. ExPASy TrEMBL
Match: A0A1S3BR64 (ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492297 PE=4 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 3.8e-254
Identity = 462/567 (81.48%), Postives = 506/567 (89.24%), Query Frame = 0


Query: 1   MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYC 60
           ME+V +EGDQ+FTSL+KLLAS+N ATRDKTLRVI+KTWLPTQT LSDGDM+KLWKGLFYC
Sbjct: 1   MEEV-VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYC 60

Query: 61  VWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120
           VWHADK+PVQSEL+NRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR
Sbjct: 61  VWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120

Query: 121 RFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 180
           RF+HQFFAL+KKH WDLELC  L++VLEERV F++D FHGNGVNYQIASVFLEELRPFLP
Sbjct: 121 RFLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLP 180

Query: 181 LGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDI 240
           L KEV+D LFKPF+LS+AKLPDKVL GKIKSNLFDV+L+ GK+LLE RK G+D+DSGDD 
Sbjct: 181 LQKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDT 240

Query: 241 VVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQ 300
            VYGTISLTN FS+TFYELGSS DC QGNRKVLFAMHEE+QKLEKDF SSGIEIS PDLQ
Sbjct: 241 AVYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQ 300

Query: 301 EQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKD 360
           EQD DEVPTL+P+   EEAPS+ISMVDVDV  ES+DKALKK+K++KKA DGS KKK KK 
Sbjct: 301 EQDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKA 360

Query: 361 KKAKKTANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQF 420
           KKAKKT NGISDLVSE    NKDN+NIVVANGENSNNEQISDGNM+TFDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEK 480
           E+VAAE D GD+++S VIS NGSVKKRKRAK VD  Q HD+ LPS+   EGNTAAK  EK
Sbjct: 421 EKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEK 480

Query: 481 SAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKR 540
           S KKV+FSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEF  TTKRTKR
Sbjct: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKR 540

Query: 541 RAVAARAKKSVRGLPVKHLKKLKSTRT 564
           RAV+ R KK VR LPVK LKKLKS  T
Sbjct: 541 RAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Sed0009431 vs. ExPASy TrEMBL
Match: A0A0A0LGX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1)

HSP 1 Score: 880.2 bits (2273), Expect = 4.7e-252
Identity = 463/567 (81.66%), Postives = 503/567 (88.71%), Query Frame = 0


Query: 1   MEDVAIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYC 60
           ME+V +EGDQ+FTSL+KLLAS+N ATRDKTLRVI+KTWLPTQT LSDGDM+KLWKGLFYC
Sbjct: 1   MEEV-VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYC 60

Query: 61  VWHADKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120
           VWHADK+PVQSEL+NRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR
Sbjct: 61  VWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIR 120

Query: 121 RFMHQFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLP 180
           RF+HQFFAL+KKH WDLELC RL++VLEERV F+ED FHGNGVNYQIASVFLEELRPFLP
Sbjct: 121 RFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLP 180

Query: 181 LGKEVIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDI 240
           L KEV+D LFKPF+LS+ KLPDKVLLGKIKSNLFDV+L+ GK+LLE RK G+DVDS DD 
Sbjct: 181 LQKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDT 240

Query: 241 VVYGTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQ 300
           VVYGT+SLTN FS+TFYELGSS DC QGNRKVLFAMHEE+QKLEKDF SSGIEIS PDLQ
Sbjct: 241 VVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQ 300

Query: 301 EQDEDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKD 360
           EQD DEVPTL+P+S  EEAPS+IS+VDVDV  ES+DKALKK+KK+KKA DGS KKK KK 
Sbjct: 301 EQDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKA 360

Query: 361 KKAKKTANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQF 420
           KKAKKT NGISDLVSE    NKDN+NIVVANGENSNNEQISDGNM+TFDE+VISNLQMQF
Sbjct: 361 KKAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420

Query: 421 ERVAAEVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEK 480
           ERVAAE D G + +S VIS NGSVKKRKRAK V   Q HD  LPS+   EGNTAAK  EK
Sbjct: 421 ERVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEK 480

Query: 481 SAKKVKFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKR 540
           S KKV+FSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEF  TTKRTKR
Sbjct: 481 SVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKR 540

Query: 541 RAVAARAKKSVRGLPVKHLKKLKSTRT 564
           RAV+ R K  VR LPVK LKKLKS  T
Sbjct: 541 RAVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Sed0009431 vs. ExPASy TrEMBL
Match: A0A6J1HNW4 (ribosomal RNA processing protein 1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465388 PE=4 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 2.3e-251
Identity = 462/562 (82.21%), Postives = 500/562 (88.97%), Query Frame = 0


Query: 6   IEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYCVWHAD 65
           +EGDQDFTSLIKLLAS+N ATRDKTLRVI+KTWLPTQT LSDGDM+KLWKGLFYCVWHAD
Sbjct: 4   VEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHAD 63

Query: 66  KLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQ 125
           KL VQ+EL+NRLASLLLHL+L LA QYFS+FL+TMRREWAGIDALRLDKFYLLIRRFMHQ
Sbjct: 64  KLHVQTELINRLASLLLHLELPLAFQYFSIFLVTMRREWAGIDALRLDKFYLLIRRFMHQ 123

Query: 126 FFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLPLGKEV 185
           FFAL+KK+ WDLELC R ++VLEERV F++D FHGNGVNYQIASVFLEELRPFLPLGKEV
Sbjct: 124 FFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEV 183

Query: 186 IDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGEDVDSGDDIVVYGT 245
           ID +FKPF+LS+AKL DKV+LGKIKSNLFDVLL+ GK+LLE RKCGED++S DDIVVYGT
Sbjct: 184 IDIVFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVYGT 243

Query: 246 ISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQEQDED 305
           I LTNLFSSTFYELGSS DC Q NRKVLFAMHEEYQKLEK F+SSGIEIS+PDLQEQD D
Sbjct: 244 IPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQDGD 303

Query: 306 EVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKDKKAKK 365
           EVPTL+P+S  E     ISM DVDV+DE +DKALKKKKK KKA DGS KKKT   KKAKK
Sbjct: 304 EVPTLVPISSEE-----ISMADVDVSDEITDKALKKKKKTKKATDGSGKKKT---KKAKK 363

Query: 366 TANGISDLVSE----NKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQFERVAA 425
             NGISDLVS     NKD++NIVVANGENSNNEQISDGNM+TFDESVISNLQMQFERVAA
Sbjct: 364 NTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAA 423

Query: 426 EVDSGDNVLSAVISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEKSAKKV 485
           E + GDNV+S VISANGSVKKRKRAKK D +QTHD+VLP+QVD EGNTAAK GE S KKV
Sbjct: 424 EAEFGDNVMSPVISANGSVKKRKRAKKADVQQTHDVVLPNQVDTEGNTAAKSGENSVKKV 483

Query: 486 KFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKRRAVAA 545
           +FSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEF  TTKRTKRRAVA 
Sbjct: 484 RFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAM 543

Query: 546 RAKKSVRGLPVKHLKKLKSTRT 564
           RAKK VR LPVK  KK KS  T
Sbjct: 544 RAKKGVRSLPVKRSKKPKSKST 557

[Close]

BLAST of Sed0009431 vs. TAIR 10
Match: AT5G20600.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). )

HSP 1 Score: 451.4 bits (1160), Expect = 1.0e-126
Identity = 257/552 (46.56%), Postives = 360/552 (65.22%), Query Frame = 0


Query: 5   AIEGDQDFTSLIKLLASTNNATRDKTLRVIVKTWLPTQTILSDGDMRKLWKGLFYCVWHA 64
           A+  ++D  SLIK LAS   + RD++LR +++TWLP QT +SD DM+KLW+G+FYCVWHA
Sbjct: 13  ALPIEEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVWHA 72

Query: 65  DKLPVQSELVNRLASLLLHLDLDLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMH 124
           DK   QSEL++RL+S L  L L L++ YF+VFL TMRREW+ ID LRLDKFYLLIRRF+H
Sbjct: 73  DKSLYQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLH 132

Query: 125 QFFALMKKHGWDLELCSRLIRVLEERVLFSEDMFHGNGVNYQIASVFLEELRPFLPLGKE 184
            FF+L+  + WDLE   RL+ +L +  L ++D F GNGVNY I S F+EELRPFLPL KE
Sbjct: 133 GFFSLIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLRKE 192

Query: 185 VIDTLFKPFVLSLAKLPDKVLLGKIKSNLFDVLLRTGKRLLECRKCGED-VDSGDDIVVY 244
           V++ LF PFV  +  + DK+L+GKIKSNLFD LL+ GK+LL  ++ G+D V   DD+VV 
Sbjct: 193 VLELLFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVVVL 252

Query: 245 GTISLTNLFSSTFYELGSSTDCYQGNRKVLFAMHEEYQKLEKDFMSSGIEISIPDLQEQD 304
           G+I+L+  F+  FYELGSS +C+QGNRK++FA+H+E+ +LEKD  SS IE+SI +     
Sbjct: 253 GSIALSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASRPG 312

Query: 305 EDEVPTLIPLSGGEEAPSDISMVDVDVTDESSDKALKKKKKNKKAADGSDKKKTKKDKKA 364
            DEVP  +P+S                  ES+   + K KK       S KK  KK  K 
Sbjct: 313 NDEVPESVPVS------------------ESNTNVVSKSKKIVANGSSSKKKGLKKCSKT 372

Query: 365 KKTANGISDLVSENKDNDNIVVANGENSNNEQISDGNMVTFDESVISNLQMQFERVAAEV 424
           KK      D V +    D++V    +  N ++       +FDE++IS+L+ +FE++A+E+
Sbjct: 373 KK------DSVKKGAVMDSVV----DLGNKDE-------SFDETMISDLRQEFEKIASEM 432

Query: 425 DSGDNVLSAV--ISANGSVKKRKRAKKVDGKQTHDMVLPSQVDDEGNTAAKCGEKSAKKV 484
               + +++V  ++   SV K+ + +K + K    +   ++   E + A    EKS+K+V
Sbjct: 433 SPSKSEVASVCDVAEPVSVSKKTKKRKRENKGEEQVSTVNRDAAETSLAGPSSEKSSKRV 492

Query: 485 KFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFATTTKRTKRRAVAA 544
           +F+MKNNLVWKPH PLPP+ LR PP+ TPRGSALK+GIP GP+ E A+   + K +  A 
Sbjct: 493 RFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVRELASRKTKKKVKPAAR 529

Query: 545 RAKKSVRGLPVK 554
           R  KS++ L  K
Sbjct: 553 RGVKSIKNLKKK 529

The following BLAST results are available for this feature:

BLAST of Sed0009431 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149903.1	1.6e-254	83.13	ribosomal RNA processing protein 1 homolog [Momordica charantia]	[more]
XP_008450828.1	7.9e-254	81.48	PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556...	[more]
XP_038875379.1	6.7e-253	81.31	ribosomal RNA processing protein 1 homolog [Benincasa hispida]	[more]
XP_023538012.1	3.3e-252	82.38	ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_004150388.1	9.7e-252	81.66	ribosomal RNA processing protein 1 homolog [Cucumis sativus]	[more]

BLAST of Sed0009431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YK2	2.1e-23	33.48	Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b P...	[more]
Q14684	4.7e-23	34.76	Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE...	[more]
P56183	5.2e-22	31.76	Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE...	[more]
P56182	1.5e-21	31.25	Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=...	[more]
Q9Y7M6	1.4e-19	36.31	Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of Sed0009431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D805	7.7e-255	83.13	ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7U008	3.8e-254	81.48	Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BR64	3.8e-254	81.48	ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A0A0LGX3	4.7e-252	81.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1	[more]
A0A6J1HNW4	2.3e-251	82.21	ribosomal RNA processing protein 1 homolog isoform X1 OS=Cucurbita maxima OX=366...	[more]

BLAST of Sed0009431 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20600.1	1.0e-126	46.56	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010301	Nucleolar, Nop52	PFAM	PF05997	Nop52	coord: 14..215 e-value: 4.1E-55 score: 186.9
IPR010301	Nucleolar, Nop52	PANTHER	PTHR13026	NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52	coord: 14..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 492..525
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 542..563
None	No IPR available	PANTHER	PTHR13026:SF0	RIBOSOMAL RNA-PROCESSING 1	coord: 14..546

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009431.1	Sed0009431.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0030688	preribosome, small subunit precursor