Sed0009421 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCTACCCTACCATCGTCTTCGTCTCCTTCATCGGTTTCAATTTTGCCCTAATTGTTCAAAATTGCATTCAGATCACTCTGCAAAAATTTCTCTCCAACGATGAAGAAAAGCTCTGTAAAAGACGAAGAACAGAATTGCTCGAAACCGGCATTCATGAAGAACAAGAAGCACAAGAACATGAAGCGATTGGGAGGGAAGGGACTTTCCCTCGAGGCGTTTGCGAATGCGAAATCAACTACCGATTACTACAATCCAGCTTTGATAAGTATGATTCTGCTTAACTATTGCTATCTTCAAATTCTCTTTGATCTTGATCATCGATTAATACCCATTAGTTATTTTTACATCACTCGTTGCTGGTTCTGTTATATCTAGTTTTTAGGGTTTTTGTTTACTTGTTATGGGGCTTGAAGTTTTGTTGTGGATTCAATATTTGGCTGGAGAGTACATTGCATTTGTCGGTGTTTAGTTCTGTATTTAGAATTGGGGGAATGCAATTGGATTTTTTTTTTTTTTTTTTTGAAACAAGGGTAACCACACCCGTTCCTAAGCCAAGCACCGGGAGACATCGAAGGAGTAATGTCACAGGTGAATCTCAAACCTGGGATCATGAGAGCATAACTTTAAAGCCCAAGTCTTCAACCACTATGTTATCCCTTGGGGACTTGAGGGAATTGGATGTTATCATATTACAGTCTGAAAATATGTGAAATTCTTATTGAGATGAATAGGTTATTATGAGTTTAATGGTCTTTGTTTATGGTATTGATTTGACCCTCATGTATATGTATCTTTTGTTCAGAAAAGCAAAGAGAGTTCTACAAGAATGCTAAACATGTCAGCAAGTTTAAGAAGTTGGTTAAGAATCAGAATAATCAGCAGAATGAGATGCCTTCAAGCTCAAAGGTTGGACTTGTGGAGGTATGAATAAGTATCTAATATCCTAAAATCTCAGTCATGTTTGTAAACCTTTCTTTTGTTTGGGACAACCATATAACCTATAACATTTGATTGTTAAAGAAAGGTAGTTGTCTATTATGCATTGAATTGATAACTTTTTAGTTCCTTAAAGCTCTCTCGACCTCTAGAATTATTCAGAATGGTAATCTTAGGCCCCGTTTGATAACCATTTTGTTTTTCGTTTTTTGTTTATGAAATTTAAGCCTACAACTACTACCTTACTATACTTTTTCCTTATTTTGATATCTACATCTTACCTATATTTTAATAAACAAAACCAAAATTTGGAAACAAAAAAAAGTAAGTTTCAAAAGTTTGTTTTTATTTTTGAAATTTGGTTAGTATTCACCTACTTTTTTAAAGGAATATAGATACATGGTAGGAAAGATGGAGCACATGTTAGAAATTTTTAGTAGAAATAAGTTTAAATTTCATAAACCGAAAACAAAAAACCAAATGATTATCAAACGGGGCCTTATTAATTAAGCTTTCATTGTTCTTTTAATCCGAATGAAAAAATGATGTAGCAGAATGTTTCATTAGATAATCCGTTGAAAGTTTTCTTATAAGCTGAGAGAGAGATGAGAGCTTTTATTTCCTTTTGGTTAGTAAGTTATTTCAGGTTATTATTTAATGTTTGTTGATTATAATTGGATAGAACCATCATGGGGTGACTTAGTGGCCAAGAGTGTATAACTAAGAGGTGATGAGTTTAATTTATCGTGTCCACCTACCTAGGATCATTGATTACAAGTTTTCTTGACATCTAAATGTTATAAGGTCAAGTTGTCGACTTTAGGCTGTATGTCTTATGTGCGTGTAAGCTGACCTAGATACTCACGGATATATTAAAAAAATTATAATTGTGTAGGCATTTAACCCAATGAGCATCTGTTTTGTTTGTTTATTAACTGGTTTGTTGAAATGCGTCTTTACTTGAGTATAAAAATCTAAGCAGCTTAACTCAAATTACACGATTTTTCCGAGACAACCAAATATTAAATATTAAATCCTAAGTAAGTGACTACCGTAGCTTGAAGTCTTGAACTCATTCTCTCTAAGTCTATATTCAAGATTCAAGAAATCAACTTGGTAAGAAAAAATGTTTAGAACACTGGGTTAAAGAGAAGAAAGAAGGAATGACAATAAAGGGTTGGTTATAAGCTTTAGGAAAGCAACAAGCTGAGTTTACTTTGTCAATTTGTATCCCTCGAAAATCTGAAAAAATCTGAACTTTTATTAATGTTTAAGTTGATTTCTAATTAAATGTTAAATCATTTTGCTTACATTTTGAAATTCTTGTTTTTTTCTTAATCTGTAATGGCTACAATTTATACCCATTTATTAATATCAACTGTCTTGTCTCATTCAATCATCATGGAGTGATTATGAAGGGTTTTAGTAACTAAGAGATGATGAGTTCAATGTGTGGTGACCGCCTATGTAGGAATTAATTTCTTACTGTTTCCTTGACATCCAAATGTTGTTGGATTAGGCGATATGGCATGTGACAATAGTCAAGTTACGTGCAAACTAACCCATGTTAAAAAAAATGTCTTAGTCTCATTCCAGGTATGTGTCTTCATTGCCTTTACCTTGAGCCTATGGCAATGAAGAGTCTGGTCACTTTATGGTCACCTTTCTTCTTTGAAAACGTGTTAATTAAGGCCCCGTTTGATAACCATTTTTTTTAATGAAATTTAAGCCTACAACAACTACCTTATTATACCTTTTTCCTTATTTGGAATCTACATCTTACCTATATTTTAATAAACAAAATCAAAAGTTGGAAAAAAAAAAGTAGCTTCCAAAAGCTTACTTTTGTTTTTGAAATTTGGTTAGTATTCACCTACTTTCTTAAGGAAATATGGATACCTTGTAGGAAAGATAGAGCACATAGTATAAGCATAAATTACATAAACCAAAAACAAAAAATCAAAAAGTTATCGAATGGGGCCTAAAAGTTTGATTTATTAACATTTTACTATTATTAATAAATAGATTTTTTAATAAATTCCCTAAATAACCCAAATATTCCATACTCATGACTGTACACTTGGATTCCATCTTAAAAGTACCCACTACCCAGTCCAACTCCACTTATAAACACCCCTATCTGTCACTATTTGTTGATTGTGATTAGGAGATACATCAAACCTAAGGAGCATTTGTTTTCATTCCATTCATGTTATGAAAAGAATCTGCTGCACTTGAAGTATCAACTGACTCAGTTTTCTTTCTGGTTCTCAAAGGGTGAAAATGAAACAAAATCCGAGAACGCGACGAACCGAAGACGTGGGAACGTAAGGAATAGAGGCGTACCTAGTCTCCAAGGACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATGATGGCTGCAAAAAAGGAAGAACAAGAAAGGGCTAAAGCTAGACGAAACTCCACCAGGGAAAAAATGTTCAAAAGGACACGAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGCAGACTATTGGAGCCTCCATCAACAACTGAAATTGAATTTCTTATGGCTTTAGGGATGTATATTAATATTTTTCTTGTAACCTTTTAGTTTACTTTATTATACAAATCAAATTCTAGGGTGTTACAATTTATATTCTAATCTAAATGATCCATATGCTAATGTTATCAGATTTTCGTCCATTTGTTAGTGTTTGGATGTAACTCTCAGCTTTTCGTTGAAGGTTGAATGACC CCCTACCCTACCATCGTCTTCGTCTCCTTCATCGGTTTCAATTTTGCCCTAATTGTTCAAAATTGCATTCAGATCACTCTGCAAAAATTTCTCTCCAACGATGAAGAAAAGCTCTGTAAAAGACGAAGAACAGAATTGCTCGAAACCGGCATTCATGAAGAACAAGAAGCACAAGAACATGAAGCGATTGGGAGGGAAGGGACTTTCCCTCGAGGCGTTTGCGAATGCGAAATCAACTACCGATTACTACAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTACAAGAATGCTAAACATGTCAGCAAGTTTAAGAAGTTGGTTAAGAATCAGAATAATCAGCAGAATGAGATGCCTTCAAGCTCAAAGGTTGGACTTGTGGAGGGTGAAAATGAAACAAAATCCGAGAACGCGACGAACCGAAGACGTGGGAACGTAAGGAATAGAGGCGTACCTAGTCTCCAAGGACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATGATGGCTGCAAAAAAGGAAGAACAAGAAAGGGCTAAAGCTAGACGAAACTCCACCAGGGAAAAAATGTTCAAAAGGACACGAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGCAGACTATTGGAGCCTCCATCAACAACTGAAATTGAATTTCTTATGGCTTTAGGGATGTATATTAATATTTTTCTTGTAACCTTTTAGTTTACTTTATTATACAAATCAAATTCTAGGGTGTTACAATTTATATTCTAATCTAAATGATCCATATGCTAATGTTATCAGATTTTCGTCCATTTGTTAGTGTTTGGATGTAACTCTCAGCTTTTCGTTGAAGGTTGAATGACC ATGAAGAAAAGCTCTGTAAAAGACGAAGAACAGAATTGCTCGAAACCGGCATTCATGAAGAACAAGAAGCACAAGAACATGAAGCGATTGGGAGGGAAGGGACTTTCCCTCGAGGCGTTTGCGAATGCGAAATCAACTACCGATTACTACAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTACAAGAATGCTAAACATGTCAGCAAGTTTAAGAAGTTGGTTAAGAATCAGAATAATCAGCAGAATGAGATGCCTTCAAGCTCAAAGGTTGGACTTGTGGAGGGTGAAAATGAAACAAAATCCGAGAACGCGACGAACCGAAGACGTGGGAACGTAAGGAATAGAGGCGTACCTAGTCTCCAAGGACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATGATGGCTGCAAAAAAGGAAGAACAAGAAAGGGCTAAAGCTAGACGAAACTCCACCAGGGAAAAAATGTTCAAAAGGACACGAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGCAGACTATTGGAGCCTCCATCAACAACTGA MKKSSVKDEEQNCSKPAFMKNKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVSKFKKLVKNQNNQQNEMPSSSKVGLVEGENETKSENATNRRRGNVRNRGVPSLQGLYERKHEEKEKARMEKEAMMAAKKEEQERAKARRNSTREKMFKRTRKGQPVMKYRIEHLLQTIGASINN Homology
BLAST of Sed0009421 vs. NCBI nr
Match: XP_023513566.1 (uncharacterized protein LOC111778133 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 285.8 bits (730), Expect = 2.8e-73 Identity = 158/192 (82.29%), Postives = 173/192 (90.10%), Query Frame = 0
BLAST of Sed0009421 vs. NCBI nr
Match: XP_022960530.1 (uncharacterized protein LOC111461241 [Cucurbita moschata]) HSP 1 Score: 284.3 bits (726), Expect = 8.0e-73 Identity = 159/192 (82.81%), Postives = 173/192 (90.10%), Query Frame = 0
BLAST of Sed0009421 vs. NCBI nr
Match: XP_022953215.1 (uncharacterized protein LOC111455827 [Cucurbita moschata] >KAG6575862.1 hypothetical protein SDJN03_26501, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 283.1 bits (723), Expect = 1.8e-72 Identity = 159/191 (83.25%), Postives = 172/191 (90.05%), Query Frame = 0
BLAST of Sed0009421 vs. NCBI nr
Match: XP_038876713.1 (uncharacterized protein LOC120069103 [Benincasa hispida]) HSP 1 Score: 282.7 bits (722), Expect = 2.3e-72 Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 0
BLAST of Sed0009421 vs. NCBI nr
Match: KAG6593160.1 (hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025559.1 hypothetical protein SDJN02_12055 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 282.3 bits (721), Expect = 3.0e-72 Identity = 158/192 (82.29%), Postives = 172/192 (89.58%), Query Frame = 0
BLAST of Sed0009421 vs. ExPASy TrEMBL
Match: A0A6J1H9B9 (uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC111461241 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 3.9e-73 Identity = 159/192 (82.81%), Postives = 173/192 (90.10%), Query Frame = 0
BLAST of Sed0009421 vs. ExPASy TrEMBL
Match: A0A6J1GP14 (uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC111455827 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 8.6e-73 Identity = 159/191 (83.25%), Postives = 172/191 (90.05%), Query Frame = 0
BLAST of Sed0009421 vs. ExPASy TrEMBL
Match: A0A6J1KV89 (uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 9.5e-72 Identity = 156/192 (81.25%), Postives = 171/192 (89.06%), Query Frame = 0
BLAST of Sed0009421 vs. ExPASy TrEMBL
Match: A0A0A0K7L3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 3.1e-70 Identity = 156/192 (81.25%), Postives = 168/192 (87.50%), Query Frame = 0
BLAST of Sed0009421 vs. ExPASy TrEMBL
Match: A0A1S3BRH3 (uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 4.0e-70 Identity = 155/192 (80.73%), Postives = 168/192 (87.50%), Query Frame = 0
BLAST of Sed0009421 vs. TAIR 10
Match: AT4G03180.1 (CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink). ) HSP 1 Score: 141.7 bits (356), Expect = 6.0e-34 Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|