Sed0009376 (gene) Chayote v1

Overview


Name	Sed0009376
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Germin-like protein
Location	LG04: 2718664 .. 2719423 (-)
RNA-Seq Expression	Sed0009376
Synteny	Sed0009376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTTTATAAGCACCATAATTTGCCTCCATTGCTGCAACAATCCATGGCTTCCATAGCTGCAATTTCTGTCCTAACTTTTGCCGTGATTGCGGCAACGTGTGCTGCAGATGTCGACTTACTTCAAGATATCTGCATCGCCGATCTCGCTTCAGGTATGTCCCTCTTTTCCAGCCCATGATCTTTAGTCTTGACTTGACAATAACTACTTTTTGGTAGGGACTAAGGTGAATGGGTTTCTATGCAAGACGAATGTATCTGCCGCTGACTTCTTCTTCGATGGACTTGCTGAGCCCGGCCTCACCAACACTACATCAGGCGCGGTGGTTAAAGGAGCCAACGTCCAAAAAATCCCAGGTCTCAACACTCTAGGAGTGTCCCTTGCTCGCATTGACTATGCCCCCGGAGGCCTCAATCCACCACACACGCACCCACGTGCCACCGAGATAGTGTTCGTTCTCGACGGTGAGCTAGACGTTGGCTTCATTACTACTGCCAATGTGTTGATATCTAAGTCCATCAAGAAGGGAGACATATTTGTTTTTCCAAAGGGGTTGGTGCACTTTCAGAAGAACAATGGAAAAGAGGCTGCTGCAGTGATTGCAGCATTCAACAGCCAGTTACCAGGAACTCAATCTATTGCCGCCACTCTCTTTGCCGCAACTCCTTCCGTGCCGGATAACGTACTCACCAAGGCTTTCCAAGTTGGTACCAAGGAGATCGAGAAAATCAAGTCTCGCTTTGCGCCCAAAAACTAA

mRNA sequence

ATGTTTGTTTATAAGCACCATAATTTGCCTCCATTGCTGCAACAATCCATGGCTTCCATAGCTGCAATTTCTGTCCTAACTTTTGCCGTGATTGCGGCAACGTGTGCTGCAGATGTCGACTTACTTCAAGATATCTGCATCGCCGATCTCGCTTCAGGGACTAAGGTGAATGGGTTTCTATGCAAGACGAATGTATCTGCCGCTGACTTCTTCTTCGATGGACTTGCTGAGCCCGGCCTCACCAACACTACATCAGGCGCGGTGGTTAAAGGAGCCAACGTCCAAAAAATCCCAGGTCTCAACACTCTAGGAGTGTCCCTTGCTCGCATTGACTATGCCCCCGGAGGCCTCAATCCACCACACACGCACCCACGTGCCACCGAGATAGTGTTCGTTCTCGACGGTGAGCTAGACGTTGGCTTCATTACTACTGCCAATGTGTTGATATCTAAGTCCATCAAGAAGGGAGACATATTTGTTTTTCCAAAGGGGTTGGTGCACTTTCAGAAGAACAATGGAAAAGAGGCTGCTGCAGTGATTGCAGCATTCAACAGCCAGTTACCAGGAACTCAATCTATTGCCGCCACTCTCTTTGCCGCAACTCCTTCCGTGCCGGATAACGTACTCACCAAGGCTTTCCAAGTTGGTACCAAGGAGATCGAGAAAATCAAGTCTCGCTTTGCGCCCAAAAACTAA

Coding sequence (CDS)

ATGTTTGTTTATAAGCACCATAATTTGCCTCCATTGCTGCAACAATCCATGGCTTCCATAGCTGCAATTTCTGTCCTAACTTTTGCCGTGATTGCGGCAACGTGTGCTGCAGATGTCGACTTACTTCAAGATATCTGCATCGCCGATCTCGCTTCAGGGACTAAGGTGAATGGGTTTCTATGCAAGACGAATGTATCTGCCGCTGACTTCTTCTTCGATGGACTTGCTGAGCCCGGCCTCACCAACACTACATCAGGCGCGGTGGTTAAAGGAGCCAACGTCCAAAAAATCCCAGGTCTCAACACTCTAGGAGTGTCCCTTGCTCGCATTGACTATGCCCCCGGAGGCCTCAATCCACCACACACGCACCCACGTGCCACCGAGATAGTGTTCGTTCTCGACGGTGAGCTAGACGTTGGCTTCATTACTACTGCCAATGTGTTGATATCTAAGTCCATCAAGAAGGGAGACATATTTGTTTTTCCAAAGGGGTTGGTGCACTTTCAGAAGAACAATGGAAAAGAGGCTGCTGCAGTGATTGCAGCATTCAACAGCCAGTTACCAGGAACTCAATCTATTGCCGCCACTCTCTTTGCCGCAACTCCTTCCGTGCCGGATAACGTACTCACCAAGGCTTTCCAAGTTGGTACCAAGGAGATCGAGAAAATCAAGTCTCGCTTTGCGCCCAAAAACTAA

Protein sequence

MFVYKHHNLPPLLQQSMASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLAEPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGELDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAATLFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPKN

Homology

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BLAST of Sed0009376 vs. NCBI nr
Match: XP_022928396.1 (germin-like protein 5-1 [Cucurbita moschata])

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 199/214 (92.99%), Postives = 208/214 (97.20%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLA 76
           MA IAAISVL FAVIA +CAAD DLLQDIC+ADLASGTKVNGF+CKTNVSA DFFFDGLA
Sbjct: 1   MAYIAAISVLAFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 77  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 136
           +PGLTNTTSGAVV GANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATE+VFVL+G+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 137 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 196
           LDVGFITTANVLISKSIKKG+IFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQS+AAT
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 197 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

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BLAST of Sed0009376 vs. NCBI nr
Match: KAG6588513.1 (Germin-like protein 5-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.3 bits (996), Expect = 4.7e-104
Identity = 198/214 (92.52%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLA 76
           MA IAAISVL FAVIA +CAAD DLLQDIC+ADLASGTKVNGF+CKTNVSA DFFFDGLA
Sbjct: 1   MAYIAAISVLAFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 77  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 136
           +PGLTNTTSGAVV GANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATE+VFVL+G+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 137 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 196
           LDVGFITT NVLISKSIKKG+IFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQS+AAT
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 197 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

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BLAST of Sed0009376 vs. NCBI nr
Match: XP_023530546.1 (germin-like protein 5-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.3 bits (996), Expect = 4.7e-104
Identity = 198/214 (92.52%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLA 76
           MA IAAISVL FAVIA +CAAD DLLQDIC+ADLASGTKVNGF+CKTNVSA DFFFDGLA
Sbjct: 1   MAYIAAISVLVFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 77  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 136
           +PGLTNTTSGAVV GANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATE+VFVL+G+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 137 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 196
           LDVGFITT NVLISKSIKKG+IFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQS+AAT
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 197 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

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BLAST of Sed0009376 vs. NCBI nr
Match: XP_022157615.1 (germin-like protein subfamily 2 member 4 [Momordica charantia])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 196/214 (91.59%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLA 76
           MASIAAISVLTF VI  TCAADVDLLQDIC+ADL+SG KVNGF CKTN+SAADFFFDGLA
Sbjct: 1   MASIAAISVLTFVVIVGTCAADVDLLQDICVADLSSGIKVNGFPCKTNISAADFFFDGLA 60

Query: 77  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 136
           +PGLTNTTSGA V GANVQKIPGLNTLGVSLAR+DYAPGGLNPPHTHPRATEIVFVL+GE
Sbjct: 61  KPGLTNTTSGAAVTGANVQKIPGLNTLGVSLARVDYAPGGLNPPHTHPRATEIVFVLEGE 120

Query: 137 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 196
           LDVGFITTANVLISKSIKKG+IFVFPKGLVHFQKNNGK+AAAVIAAFNSQLPGTQSIAAT
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAAT 180

Query: 197 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LFAATPSVPDNVLTK FQVGTKE++KIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKGFQVGTKEVDKIKSRFAPK 214

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BLAST of Sed0009376 vs. NCBI nr
Match: XP_022969982.1 (germin-like protein 5-1 [Cucurbita maxima])

HSP 1 Score: 384.8 bits (987), Expect = 5.2e-103
Identity = 198/214 (92.52%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLA 76
           MA IAAISVL FAVIA + AAD DLLQDIC+ADLASGTKVNGF+CKTNVSA DFFFDGLA
Sbjct: 1   MAYIAAISVLVFAVIATSSAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 77  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 136
           +PGLTNTTSGAVV GANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVL+G+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQ 120

Query: 137 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 196
           LDVGFITT NVLISKSIKKG+IFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQS+AAT
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 197 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

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BLAST of Sed0009376 vs. ExPASy Swiss-Prot
Match: Q6I544 (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.5e-80
Identity = 151/211 (71.56%), Postives = 174/211 (82.46%), Query Frame = 0


Query: 21  AAISVLTFAVI-AATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLAEPG 80
           A ++VL  A++   + A D DLLQDIC+ADL S  KVNGF CK  V+  DF+F GLA  G
Sbjct: 9   AVVAVLLLALLPTPSTAGDPDLLQDICVADLTSAVKVNGFACKAAVTEDDFYFKGLAAAG 68

Query: 81  LTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGELDV 140
            TN T G+VV GANV+K+PGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVL G LDV
Sbjct: 69  NTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDV 128

Query: 141 GFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAATLFA 200
           GFITTAN L +K+I  GD+FVFP+GL+HFQKNNG   AAVI+AFNSQLPGTQS+A TLFA
Sbjct: 129 GFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFA 188

Query: 201 ATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           A+P VPD VLTKAFQVGTKE+EKIKSR APK
Sbjct: 189 ASPEVPDGVLTKAFQVGTKEVEKIKSRLAPK 219

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BLAST of Sed0009376 vs. ExPASy Swiss-Prot
Match: Q9M263 (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.6e-78
Identity = 142/198 (71.72%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 36  AADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFFDGLAEPGLTNTTSGAVVKGAN 95
           A D D LQD+C+AD  SG KVNGF CK  +N++A+DFFF G+ +P + N T G+ V GAN
Sbjct: 21  AYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGAN 80

Query: 96  VQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGELDVGFITTANVLISKSI 155
           V+KI GLNTLGVSLARIDYAPGGLNPPHTHPRATE++FVL+GELDVGFITTAN L +K++
Sbjct: 81  VEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTV 140

Query: 156 KKGDIFVFPKGLVHFQKNNGK-EAAAVIAAFNSQLPGTQSIAATLFAATPSVPDNVLTKA 215
           KKG++FVFP+GL+H+QKNN K + A+VI+AFNSQLPGTQSIAATLF ATP++PD+VLT  
Sbjct: 141 KKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTT 200

Query: 216 FQVGTKEIEKIKSRFAPK 231
           FQ+GTKEIEKIKS+FAPK
Sbjct: 201 FQIGTKEIEKIKSKFAPK 218

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BLAST of Sed0009376 vs. ExPASy Swiss-Prot
Match: Q9S8P4 (Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2)

HSP 1 Score: 290.0 bits (741), Expect = 2.3e-77
Identity = 149/216 (68.98%), Postives = 173/216 (80.09%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFFDG 76
           M  IA + ++  A      AAD D LQD+C+AD AS   VNGF CK  +NV+A DFF + 
Sbjct: 1   MKLIAVLLLVVLATATTATAADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNL 60

Query: 77  LAEPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLD 136
           L + G TN T G++V GANVQ+IPGLNTLGVS+ARIDYAPGGLNPPHTHPRATE+VFVL+
Sbjct: 61  LVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLE 120

Query: 137 GELDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIA 196
           G+LDVGFITT N LI+K+I KG+ FVFPKGLVHFQKNNG E A VIA FNSQLPGT +I 
Sbjct: 121 GQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIP 180

Query: 197 ATLFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
            TLF ATP VPDNVLTKAFQ+GTKE++KIKS+FAPK
Sbjct: 181 LTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKFAPK 216

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BLAST of Sed0009376 vs. ExPASy Swiss-Prot
Match: P94014 (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 287.0 bits (733), Expect = 1.9e-76
Identity = 143/214 (66.82%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 19  SIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFFDGLA 78
           ++  + +LT      + +AD D+LQD+C+ADL SG K+NGF CK    V++ADFF  GLA
Sbjct: 5   TLTLLLLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLA 64

Query: 79  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 138
           +PGLTN T GA+V GANV  IPGLNTLGVSL+RIDYAPGGLNPPHTHPRATE+VFVL+G 
Sbjct: 65  KPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGT 124

Query: 139 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 198
           LDVGF+TTAN LIS+S+KKGD+F FPKGLVHFQKNNG   A+VIAAFNSQLPGTQS+ AT
Sbjct: 125 LDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGAT 184

Query: 199 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LF +TP VPDN+L +AFQ     ++ IKS+F PK
Sbjct: 185 LFGSTPPVPDNILAQAFQTSPGTVKHIKSKFQPK 218

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BLAST of Sed0009376 vs. ExPASy Swiss-Prot
Match: Q94EG3 (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.2e-75
Identity = 140/215 (65.12%), Postives = 177/215 (82.33%), Query Frame = 0


Query: 15  QSMASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDG 74
           QSM  +A + +L  ++     AAD D+LQD+C+ADL S  KVNGF CKTN +AADF    
Sbjct: 12  QSM-EMAILFLLAISIDRYCFAADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSLA 71

Query: 75  LAEPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLD 134
           +++PG TN   G+VV  ANV+++PGLNTLGVSLARIDYAPGG+NPPHTHPRA+E+VFV++
Sbjct: 72  ISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVME 131

Query: 135 GELDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIA 194
           GELDVGFITTANVL+SK I KG++FVFP+GLVHFQKNNG+  AAVI+AFNSQLPGTQSI 
Sbjct: 132 GELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIP 191

Query: 195 ATLFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAP 230
            TLF A+P VPD+VL + FQ+ T+++++IKS+FAP
Sbjct: 192 ITLFGASPPVPDDVLAQTFQINTEDVQQIKSKFAP 225

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BLAST of Sed0009376 vs. ExPASy TrEMBL
Match: A0A6J1EK67 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435222 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.9e-105
Identity = 199/214 (92.99%), Postives = 208/214 (97.20%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLA 76
           MA IAAISVL FAVIA +CAAD DLLQDIC+ADLASGTKVNGF+CKTNVSA DFFFDGLA
Sbjct: 1   MAYIAAISVLAFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 77  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 136
           +PGLTNTTSGAVV GANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATE+VFVL+G+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 137 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 196
           LDVGFITTANVLISKSIKKG+IFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQS+AAT
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 197 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

[Close]

BLAST of Sed0009376 vs. ExPASy TrEMBL
Match: A0A6J1DTK8 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111024271 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.7e-104
Identity = 196/214 (91.59%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLA 76
           MASIAAISVLTF VI  TCAADVDLLQDIC+ADL+SG KVNGF CKTN+SAADFFFDGLA
Sbjct: 1   MASIAAISVLTFVVIVGTCAADVDLLQDICVADLSSGIKVNGFPCKTNISAADFFFDGLA 60

Query: 77  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 136
           +PGLTNTTSGA V GANVQKIPGLNTLGVSLAR+DYAPGGLNPPHTHPRATEIVFVL+GE
Sbjct: 61  KPGLTNTTSGAAVTGANVQKIPGLNTLGVSLARVDYAPGGLNPPHTHPRATEIVFVLEGE 120

Query: 137 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 196
           LDVGFITTANVLISKSIKKG+IFVFPKGLVHFQKNNGK+AAAVIAAFNSQLPGTQSIAAT
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAAT 180

Query: 197 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LFAATPSVPDNVLTK FQVGTKE++KIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKGFQVGTKEVDKIKSRFAPK 214

[Close]

BLAST of Sed0009376 vs. ExPASy TrEMBL
Match: A0A6J1HXU8 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469013 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.5e-103
Identity = 198/214 (92.52%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCKTNVSAADFFFDGLA 76
           MA IAAISVL FAVIA + AAD DLLQDIC+ADLASGTKVNGF+CKTNVSA DFFFDGLA
Sbjct: 1   MAYIAAISVLVFAVIATSSAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 77  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 136
           +PGLTNTTSGAVV GANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVL+G+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQ 120

Query: 137 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 196
           LDVGFITT NVLISKSIKKG+IFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQS+AAT
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 197 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

[Close]

BLAST of Sed0009376 vs. ExPASy TrEMBL
Match: A0A2I4G258 (Germin-like protein OS=Juglans regia OX=51240 GN=LOC109004037 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.8e-93
Identity = 180/216 (83.33%), Postives = 195/216 (90.28%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFFDG 76
           M +I A+ V TFA+     AAD DLLQD+C+ADLASG KVNGF CK   N+SAADFFF+G
Sbjct: 1   MVAIVALVVTTFAIFFGAAAADPDLLQDVCVADLASGLKVNGFTCKDVANISAADFFFEG 60

Query: 77  LAEPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLD 136
           LA+PGLTN T G++V  ANVQKIPGLNTLGVSL+RIDYAPGGLNPPHTHPRATEIVFVLD
Sbjct: 61  LAKPGLTNNTFGSLVTAANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIVFVLD 120

Query: 137 GELDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIA 196
           GELDVGFITTANVLISKSIKKG+IFVFPKGLVHFQKNNGK  AAV+AAFNSQLPGTQSIA
Sbjct: 121 GELDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKVPAAVLAAFNSQLPGTQSIA 180

Query: 197 ATLFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           ATLFAATP+VPDNVLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 ATLFAATPAVPDNVLTKAFQVGTKEVEKIKSRFAPK 216

[Close]

BLAST of Sed0009376 vs. ExPASy TrEMBL
Match: A0A2N9ETT3 (Germin-like protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6095 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.5e-92
Identity = 177/216 (81.94%), Postives = 193/216 (89.35%), Query Frame = 0


Query: 17  MASIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFFDG 76
           M +I  + V+TFA++  T  AD DLLQD+C+ADL SG KVNGF CK   N+SAADF FDG
Sbjct: 1   MEAIVTLFVMTFAIVLGTTTADPDLLQDVCVADLTSGVKVNGFTCKDIANISAADFSFDG 60

Query: 77  LAEPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLD 136
           LA+PGLTN T G++V  ANVQKIPGLNTLGVSL+RIDYAPGGLNPPHTHPRATEIVFVL+
Sbjct: 61  LAKPGLTNNTFGSLVTAANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIVFVLE 120

Query: 137 GELDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIA 196
           GELDVGFITTANVLISKSIK+G+IFVFPKGLVHFQKNNGK AAAVIAAFNSQLPGTQSIA
Sbjct: 121 GELDVGFITTANVLISKSIKQGEIFVFPKGLVHFQKNNGKVAAAVIAAFNSQLPGTQSIA 180

Query: 197 ATLFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
            TLFAATP VPDNVLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 TTLFAATPPVPDNVLTKAFQVGTKEVEKIKSRFAPK 216

[Close]

BLAST of Sed0009376 vs. TAIR 10
Match: AT3G62020.1 (germin-like protein 10 )

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-79
Identity = 142/198 (71.72%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 36  AADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFFDGLAEPGLTNTTSGAVVKGAN 95
           A D D LQD+C+AD  SG KVNGF CK  +N++A+DFFF G+ +P + N T G+ V GAN
Sbjct: 21  AYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGAN 80

Query: 96  VQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGELDVGFITTANVLISKSI 155
           V+KI GLNTLGVSLARIDYAPGGLNPPHTHPRATE++FVL+GELDVGFITTAN L +K++
Sbjct: 81  VEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTV 140

Query: 156 KKGDIFVFPKGLVHFQKNNGK-EAAAVIAAFNSQLPGTQSIAATLFAATPSVPDNVLTKA 215
           KKG++FVFP+GL+H+QKNN K + A+VI+AFNSQLPGTQSIAATLF ATP++PD+VLT  
Sbjct: 141 KKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTT 200

Query: 216 FQVGTKEIEKIKSRFAPK 231
           FQ+GTKEIEKIKS+FAPK
Sbjct: 201 FQIGTKEIEKIKSKFAPK 218

[Close]

BLAST of Sed0009376 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-77
Identity = 143/214 (66.82%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 19  SIAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFFDGLA 78
           ++  + +LT      + +AD D+LQD+C+ADL SG K+NGF CK    V++ADFF  GLA
Sbjct: 5   TLTLLLLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLA 64

Query: 79  EPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGE 138
           +PGLTN T GA+V GANV  IPGLNTLGVSL+RIDYAPGGLNPPHTHPRATE+VFVL+G 
Sbjct: 65  KPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGT 124

Query: 139 LDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAAT 198
           LDVGF+TTAN LIS+S+KKGD+F FPKGLVHFQKNNG   A+VIAAFNSQLPGTQS+ AT
Sbjct: 125 LDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGAT 184

Query: 199 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           LF +TP VPDN+L +AFQ     ++ IKS+F PK
Sbjct: 185 LFGSTPPVPDNILAQAFQTSPGTVKHIKSKFQPK 218

[Close]

BLAST of Sed0009376 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 280.0 bits (715), Expect = 1.7e-75
Identity = 138/213 (64.79%), Postives = 176/213 (82.63%), Query Frame = 0


Query: 20  IAAISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFFDGLAE 79
           I+ I  L+  +I +  A D D LQD+C+AD + GTK+NGF CK   N++ +DFFF G+++
Sbjct: 6   ISIIIALSCIMITSIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISK 65

Query: 80  PGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLDGEL 139
           P + N+T G+ V GANV+KIPGLNTL VSLARIDYAPGGLNPPHTHPRATE+V+VL+GEL
Sbjct: 66  PAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGEL 125

Query: 140 DVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSIAATL 199
           +VGFITTAN L +K+IK G++FVFP+GLVHFQKNNGK  A+V++AFNSQLPGT S+AATL
Sbjct: 126 EVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATL 185

Query: 200 FAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           FAA P++P++VLTK FQVG+K ++KIK R A K
Sbjct: 186 FAAEPALPEDVLTKTFQVGSKMVDKIKERLATK 218

[Close]

BLAST of Sed0009376 vs. TAIR 10
Match: AT3G62020.2 (germin-like protein 10 )

HSP 1 Score: 275.8 bits (704), Expect = 3.2e-74
Identity = 132/181 (72.93%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 53  GTKVNGFLCK--TNVSAADFFFDGLAEPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARI 112
           G KVNGF CK  +N++A+DFFF G+ +P + N T G+ V GANV+KI GLNTLGVSLARI
Sbjct: 9   GIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARI 68

Query: 113 DYAPGGLNPPHTHPRATEIVFVLDGELDVGFITTANVLISKSIKKGDIFVFPKGLVHFQK 172
           DYAPGGLNPPHTHPRATE++FVL+GELDVGFITTAN L +K++KKG++FVFP+GL+H+QK
Sbjct: 69  DYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQK 128

Query: 173 NNGK-EAAAVIAAFNSQLPGTQSIAATLFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAP 231
           NN K + A+VI+AFNSQLPGTQSIAATLF ATP++PD+VLT  FQ+GTKEIEKIKS+FAP
Sbjct: 129 NNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAP 188

[Close]

BLAST of Sed0009376 vs. TAIR 10
Match: AT5G26700.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 248.1 bits (632), Expect = 7.1e-66
Identity = 124/218 (56.88%), Postives = 169/218 (77.52%), Query Frame = 0


Query: 17  MASIAA--ISVLTFAVIAATCAADVDLLQDICIADLASGTKVNGFLCK--TNVSAADFFF 76
           MAS A   + V+T   +A    A  ++LQD+C+ADL++  KVNG+ CK  T ++  DF+F
Sbjct: 1   MASFATHLVVVVTMLFVA---MASAEMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYF 60

Query: 77  DGLAEPGLTNTTSGAVVKGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFV 136
            GLA    TNT++G+VV GANV+K+PGLNTLG+S++RIDYAP GLNPPH HPRA+EI+FV
Sbjct: 61  KGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFV 120

Query: 137 LDGELDVGFITTANVLISKSIKKGDIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQS 196
           L+G+L VGF+TTA  LI+K++ KGD+F FPKGL+HFQKN     A+V+AAF+SQLPGTQS
Sbjct: 121 LEGQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQS 180

Query: 197 IAATLFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 231
           + A+LF A   +PD++L K+FQ+  K+++KIK R+APK
Sbjct: 181 LVASLFGA---LPDDILAKSFQLKHKQVKKIKLRYAPK 212

The following BLAST results are available for this feature:

BLAST of Sed0009376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928396.1	1.6e-104	92.99	germin-like protein 5-1 [Cucurbita moschata]	[more]
KAG6588513.1	4.7e-104	92.52	Germin-like protein 5-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023530546.1	4.7e-104	92.52	germin-like protein 5-1 [Cucurbita pepo subsp. pepo]	[more]
XP_022157615.1	1.8e-103	91.59	germin-like protein subfamily 2 member 4 [Momordica charantia]	[more]
XP_022969982.1	5.2e-103	92.52	germin-like protein 5-1 [Cucurbita maxima]	[more]

BLAST of Sed0009376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6I544	6.5e-80	71.56	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500...	[more]
Q9M263	1.6e-78	71.72	Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP1...	[more]
Q9S8P4	2.3e-77	68.98	Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2	[more]
P94014	1.9e-76	66.82	Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4...	[more]
Q94EG3	8.2e-75	65.12	Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1...	[more]

BLAST of Sed0009376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK67	7.9e-105	92.99	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435222 PE=3 SV=1	[more]
A0A6J1DTK8	8.7e-104	91.59	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111024271 PE=3 SV=1	[more]
A0A6J1HXU8	2.5e-103	92.52	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469013 PE=3 SV=1	[more]
A0A2I4G258	1.8e-93	83.33	Germin-like protein OS=Juglans regia OX=51240 GN=LOC109004037 PE=3 SV=1	[more]
A0A2N9ETT3	4.5e-92	81.94	Germin-like protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6095 PE=3 SV=1	[more]

BLAST of Sed0009376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62020.1	1.1e-79	71.72	germin-like protein 10	[more]
AT1G09560.1	1.4e-77	66.82	germin-like protein 5	[more]
AT1G02335.1	1.7e-75	64.79	germin-like protein subfamily 2 member 2 precursor	[more]
AT3G62020.2	3.2e-74	72.93	germin-like protein 10	[more]
AT5G26700.1	7.1e-66	56.88	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 121..141 score: 64.01 coord: 151..171 score: 57.25 coord: 184..199 score: 50.29
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 73..221 e-value: 2.3E-39 score: 146.7
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 74..220 e-value: 2.7E-47 score: 160.1
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 37..230 e-value: 1.5E-78 score: 264.8
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 24..228
None	No IPR available	PANTHER	PTHR31238:SF199	GERMIN-LIKE PROTEIN	coord: 24..228
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 38..227 e-value: 8.14724E-87 score: 253.287
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 116..129
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 65..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009376.1	Sed0009376.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:2000280	regulation of root development
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0030145	manganese ion binding