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Sed0009238 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAATCGAAAAGACTCCAATCCAAAAGAATAAGACCAAGATCGCTCGGTCTCTCTATCTCAAGGTAAAACTGTCAACTGCATCAATACCCACACTTTCTATTACCATTTCTATCTGTCAATGTGTGTGTGGCAAACAAATCTTAGGAAGCATATGAAGAAATGGGAGTAGAATGGGGAGGGAAAAGAGATGGAACACATATTTCTATATTTCTGAACAGACAAAATAATTTTGTATTCATTTGCATGTCCTTACTGAGGAGCCCGGCTGGTGCAATTGGAATACTGAGCTCAAGTTCAGGATAAGATGTGTCACAGCTGATATCTCTCTTATCAGAATTTGTGTGTGCAGTTGGGAAGAAGGTTAGCTGAACTGAATACAAACACTAGACCACTTCCCCAGGTCCCCAACTACCAGTTGAATATTATATTTTGGCTGAGATTAGAAGGCTCTGCCCTCCCTAAAACAACCACAGTGAACAAACAATGTCACATACTAAACTAAACTAAACTAATAGGATTTAGGGTTTATATCCATCCCTTTGAGTCCAATGATTTGAATCTCCAACCTCTTAGTCGAAGATAGATTTCAATTTTTTTTTAAAAAAACAAGGGTAACCACGCCCGTCTCTAGGTCAGACACCGGAAGACATCGAAGGAATAATGTTAGAGTCGAACTTTGGATCTTGAAAGGAGCATACCTTCAAAGCTCTAGTCTTCAACCGCTGTACCACCCCTTGGGGACGAAGATAGATGTCAATTATCGCTAAGATAACAGACTTACTTGTGGTTTGACATCTCTTAATCCTAAAAAAATTAAACTACCACATGAGCTTCTGCTTCCCCCTAGAACAGCTCTCTCTCTTTCTCTTTCTATTTCTCTCTCTAGGATTTAAATATTTTAATCTTGTCTTTTATCCCTCTGTAAGTTGTCAACTACAAGTCAACCAACAAACTTACTTCCCAAAGTTTGGTGGGCAGAAGAGAATAGGCGTTTACATAAACTAAAATTTCCCTGTGGAATTTTCAAATCTCTCCATCAAAGTTTTTCCTAAATTTTCTTTCATCCACAGTTCACTAACCTTTGGAGAAACATGGACAATCATCGTCATCAAAAACAAGCTAAAATCACTCAACTAGAGTCTGAAGGTTTATTCCATCAACTTAATTTGATATTTTCCATGTCTAGGATGATTTTTCAAGTCATACTTTTCTGTTTTGAAATTTGTGGTTTATTATCGAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGAAAGGTAAAAGTTATGTTCAAAGCAACAAACCAGAATTACATAATTCTCCCACCTTTCTCAGCAAGAATGGAAAGAGATTCTACTCTCTTTCTCCTTCATTGCTTTCCAATAATCTCTAGTATCTAACATAAGAAAATGGCTTTTCATTTCAGGTGGGATCTAATAGCAGGTAGAATTCCAGGGCGTAAACCGGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGTGTTTGCCCAAAGAAGAAGAGGATGA ATGAGAATCGAAAAGACTCCAATCCAAAAGAATAAGACCAAGATCGCTCGGTCTCTCTATCTCAAGTTCACTAACCTTTGGAGAAACATGGACAATCATCGTCATCAAAAACAAGCTAAAATCACTCAACTAGAGTCTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGAAAGGTGGGATCTAATAGCAGGTAGAATTCCAGGGCGTAAACCGGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGTGTTTGCCCAAAGAAGAAGAGGATGA ATGAGAATCGAAAAGACTCCAATCCAAAAGAATAAGACCAAGATCGCTCGGTCTCTCTATCTCAAGTTCACTAACCTTTGGAGAAACATGGACAATCATCGTCATCAAAAACAAGCTAAAATCACTCAACTAGAGTCTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGAAAGGTGGGATCTAATAGCAGGTAGAATTCCAGGGCGTAAACCGGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGTGTTTGCCCAAAGAAGAAGAGGATGA MRIEKTPIQKNKTKIARSLYLKFTNLWRNMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG Homology
BLAST of Sed0009238 vs. NCBI nr
Match: XP_038875738.1 (transcription factor TRY [Benincasa hispida]) HSP 1 Score: 162.9 bits (411), Expect = 1.6e-36 Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of Sed0009238 vs. NCBI nr
Match: XP_016898876.1 (PREDICTED: transcription factor TRY [Cucumis melo] >KAA0042563.1 transcription factor TRY [Cucumis melo var. makuwa] >TYK05967.1 transcription factor TRY [Cucumis melo var. makuwa]) HSP 1 Score: 160.6 bits (405), Expect = 7.7e-36 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of Sed0009238 vs. NCBI nr
Match: XP_031742154.1 (transcription factor TRY [Cucumis sativus] >AET79925.1 R3 MYB transcription factor [Cucumis sativus] >KGN49883.1 hypothetical protein Csa_000375 [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 1.7e-35 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Sed0009238 vs. NCBI nr
Match: XP_022996343.1 (transcription factor TRY-like [Cucurbita maxima] >KAG6605768.1 Transcription factor TRY, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157.5 bits (397), Expect = 6.5e-35 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Sed0009238 vs. NCBI nr
Match: XP_022958649.1 (transcription factor TRY-like [Cucurbita moschata] >XP_023534744.1 transcription factor TRY-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34 Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy Swiss-Prot
Match: Q8GV05 (Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy Swiss-Prot
Match: O22059 (Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-21 Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy Swiss-Prot
Match: Q84RD1 (MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.7e-20 Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy Swiss-Prot
Match: B3H4X8 (MYB-like transcription factor TCL2 OS=Arabidopsis thaliana OX=3702 GN=TCL2 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 8.1e-20 Identity = 46/87 (52.87%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy Swiss-Prot
Match: Q9M157 (MYB-like transcription factor ETC3 OS=Arabidopsis thaliana OX=3702 GN=ETC3 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 5.2e-19 Identity = 44/73 (60.27%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy TrEMBL
Match: A0A5D3C2B2 (Transcription factor TRY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00630 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.7e-36 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy TrEMBL
Match: A0A1S4DSB1 (transcription factor TRY OS=Cucumis melo OX=3656 GN=LOC103482948 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.7e-36 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy TrEMBL
Match: I6NF75 (R3 MYB transcription factor OS=Cucumis sativus OX=3659 GN=TRY PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 8.3e-36 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy TrEMBL
Match: A0A6J1KAI4 (transcription factor TRY-like OS=Cucurbita maxima OX=3661 GN=LOC111491604 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 3.2e-35 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Sed0009238 vs. ExPASy TrEMBL
Match: A0A6J1H5Q3 (transcription factor TRY-like OS=Cucurbita moschata OX=3662 GN=LOC111459808 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 5.4e-35 Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Sed0009238 vs. TAIR 10
Match: AT5G53200.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.6e-26 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of Sed0009238 vs. TAIR 10
Match: AT2G46410.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 103.6 bits (257), Expect = 1.0e-22 Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of Sed0009238 vs. TAIR 10
Match: AT2G30420.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 98.6 bits (244), Expect = 3.4e-21 Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 0
BLAST of Sed0009238 vs. TAIR 10
Match: AT2G30424.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 5.7e-21 Identity = 46/87 (52.87%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Sed0009238 vs. TAIR 10
Match: AT4G01060.3 (CAPRICE-like MYB3 ) HSP 1 Score: 95.1 bits (235), Expect = 3.7e-20 Identity = 44/73 (60.27%), Postives = 54/73 (73.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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