Sed0009078 (gene) Chayote v1

Overview


Name	Sed0009078
Type	gene
Organism	Sechium edule (Chayote v1)
Description	dTMP kinase
Location	LG06: 44695270 .. 44699009 (+)
RNA-Seq Expression	Sed0009078
Synteny	Sed0009078

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGCTCCCACATTTTGTAAGCCATTGTAAGATTAATTTCTTGTTTCACCTGTGATTTATGATATTTTTTTTTGGATAATTATTATATATTTGTTTTTTATGTGTGCTATGACGAGCGGGTTAAGATTAGGAACACATTTGAATTTTTTTTTAAGGTCCAATATTTCACTAGATAGTTTCTGTTTCAATCACGATATGATACAAATTTTGTGAAAATAGTTTATTTGAAGACCTGATGTTTGTTTTTTCCTTTTTAAGGAGTTTTGGAGTAGTAACAGCGAGAAGATCCTCAAGTTCTCTTCTTGAAGTTTCATCTAAGAATTTGATCCGGAAGATTCAAATGGGAACTAATCAGAACTCTGTACTAAGAAGTTGCAACAGTAACTCGAGAGGAGCATTGGTGGTTCTAGAAGGTTTGGACCGTTGTGGGAAGAGTACGCAGTCCAGTAGATTAGTCCAGTACTTGGAAGGACTTGGTCATTCTGCTGAACTATGGCGGTTTCCAGACAGAACTACAAGTGTTGGACAAATGATATCATCTTATCTTTCAAATGAATCGCAGCTGGACGACCGCACAATACATCTTCTTTTCAGTGCTAACAGATGGGAGAAGAGGTTTATTAATTTTGTTTTGTAAAATTTGCATTTTAGTCTCTTAGATTGATAGATTTTCACTTCCTAACAAGTGATGGAGCTTTCAATGTTGTTGTTAAGTGGCAAGCTTCTAAATGAAAAATAGTCTATAGCGAACCTGGTTTTAGAAGTTTCCAAAACCATTTTATTGGAAGGTTTACACTGAGGGAAAACCTTTTTATTATGTCCACATTTTTTAGAGGAAAAATAGTTTATATCTAGCAAAGGTTACGTGGTTTGTGTTTAATTACTATAATGCTCTTGCAGATCATTAATGGAAACTAAATTGAAGAGTGGAACCACTCTTATTGTTGATCGGTATTCTTATTCAGGGGTGACCTATTCATCTGCCAAAGGACTTGGCATCGAATGGTGTAAGGTAAAAATTCAAACAAGTAATTTGGCCGAATCTCTTGTTTCTTCATATGGACGTTTTTTTTTTTTGGTAATTTTTTAGTGTGGGGTTTTAAAATGCTGATGATATATTTGTCCTTTGCAGGCACCGGAGGTTGGCTTGTTAGCTCCGGACCTCGTACTGTACCTCGACATATCTCCAGAGGTTGGTTAAATTATTTTATCATTTCTTGGAACAAGTTTAAATGCCTTGATTAGGATGGTTTACCTTAAGCTTCACCTTTTTTTGACTTGTAAATGTAATGAAGCTATTATTATGTACATACATTTTGCCATTTGGAATTGGGACTCTTAAAGTCATGACTGACATAAAAATGGTCAACCTCGGCCTTAAAGATCATGAAAGCAATTGTAAGAATGTATCATCAAATGAGCTTGGCTCTGCGGTAATGACACAAATTCACAATAAGCCATTGTTCAAGTCGAGCCGGTGTTGTTTTAGTTTATAGACTTATTTTGAAGTTTTTATTATGTCATTGATGACAATGGACTTAAAGAATAATTAACTAAACTCAGAGAGTAGTCCTTTGTGCTATCTATGATATTGAAGTTTTATAATATTGGCGTGACTTTATTTGTAAGTACTGCCATTTTTGTATTAATGATAATTGACTTCGATATGCAATCCTATCCTTACAAACTAGACAAAATTCTCAAATTTAAAAAACTTTCAATCCGTATTATGATTGCTTAATTAATAAAGAGTTATATTTTGAATGATCAGAAAGCTGCAGAAAGAGGAGGTTATGGATGTGAGAGGTATGAGCAGCTTGAGTTCCAGAGCAAAGTTGCCCAATATTATCAAATGTTGCACGATTCTTCTTGGAAGGTAACTTGTTTTTCATTTTCGTTTTTGAAACATTGACAAACAGTGGAACCTGGTTCTTGGGATTTTTTTTTTTGTTTAATGAAAAATCTTAGTTCTTGAACTTTCTTTGCAAGTACATCATAAAAAATAATAATAAATAATGTGTCCCAGACGTATTCGCGTCCTGTATTTTTAAAAAATAATGGCATGTCTTTGTGTATGGGTCAATGTCATGTCCATATTTGTGCTTCTTAGTTACTATCTACATTGAGTTTCCTTTTACTTAAATATTAATTACAGATCATCAATGCTTGCCAACCCATGGAAGATATTGAGAAAGAACTACAAGAGATTGTACTTGGCTGTGTCAAGAGATGCCACAATGGGGAGCCGCTTTCCCAGCTTTGGTTAAGTTGATGCATTCTTGTGAATCTTTAAGATTTTTTTTTTTTCCTTTTCTGAATGTTCTTTTTCCTGAATGTATTTGTATTCAACATGTTGAGAACCTGGAGGCTTGTCATGTGCGTTTTATGTTTGTTTTAACAATTCATGAGTTTATTTTGAATTTCTTTTTCAGAAAGTTATAATTTCAAGCATCAGAATTCAGACGTTATGAATCAACATGTGAATTAGTTTTCAGGAAAGAAAAGTTCAATCATGACACTTGTCCTATAAAACGCTCAAAGTCAAACATTACATAAAACTTACAAGATAGTAAAAAACTGTTATGGTCAACATAGTTGATAGCTGCTAGTTACTGTAATTCAAAAGGAAGGATTCAGCTCTTCAGATGGTTGTGATGGAATCATGGAGACTGAGATGGAGTTGTGAAGGGTGGTTCAGGTGGCATGGGCACTAATGGCTCATTGAAACCAGTATCTGGTGCTGGTGGTGCAGACACAAAGGGAAATGGATCCTGTGAAACGTCTGGAACTTCAGGAACCAAGGGAGGTGGAAGAAATGTAATAGGAGGAATCGTGAAAGGTGGTGGCTCGGTCGGGATTGATACCAGTGGTGGAGGAAATGTAGGGATGAATGGTGGTTGATCTGATGTGAATGGTGGCATATCAGCCACCAGCGGAGGTGAGAAAGTTACTAAAGGTGTTGGAGTTGAAAATAATGGTGGTGGTGAAGGAACTAGAGGTGGTGGAAACCAGGTTAAAGGTGTTGGAGTCGACAACAATGGTGGCGGTAAAGGAACCAAAGGTGGTGGAACCATTTCTGAAGGGGTCGGAGTAGAAAATAACGGCGGTGGCGGTGATGGAACCAAGGGTGATGGGGGAGAAGGAGATGGAGTTTCCGGTGGCTGTGACGGTGTTTCGAGAAAAGGAGGGGGAGAGGGAACTAAGGGAGCTGGCTGCTGATAAACTGGAGGGGGAGAAGAAACTAAAGGAGGCAGAGAAGGTCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGTATGTTGGGAAAGGCCACTGGCCACATGATCCAAATAAGTATTGGTAAAATGGATCACAGTTAGATCTTCTGTTTCTGCTTCTCTTTTCTTCATGTGGATTTTGCTTCTGTACAGTATCTGCTTCTACAAGTGCTTGGAAAATCAGCAGCAGAGCTACAAAAGATGTTATCCCTATGGTAAGCTTCATTTCTATTCTGATTCTTTTTCTGTCTTAATCTTGAATGCTTTTTGTTGGTGTTATTTGTTCTGGGCTTATATAGACTGGTTTGTTTGAACTTGCCTTGGAGTTTGCAATTATAATGTTGATTTTTATGCCATTTATGCTTGACTTTTTTTGAGTTTCAAAGAGCAAAAGTCTGATATCTGGAAGGATTTGAATGCAGCACAGAAGGAATTAATAGTCACAGCTCTCAATGCTAAGAGAAGGGTGGGAAGCAAGGAC

mRNA sequence

ATGCTTGCTCCCACATTTTGTAAGCCATTGAGTTTTGGAGTAGTAACAGCGAGAAGATCCTCAAGTTCTCTTCTTGAAGTTTCATCTAAGAATTTGATCCGGAAGATTCAAATGGGAACTAATCAGAACTCTGTACTAAGAAGTTGCAACAGTAACTCGAGAGGAGCATTGGTGGTTCTAGAAGGTTTGGACCGTTGTGGGAAGAGTACGCAGTCCAGTAGATTAGTCCAGTACTTGGAAGGACTTGGTCATTCTGCTGAACTATGGCGGTTTCCAGACAGAACTACAAGTGTTGGACAAATGATATCATCTTATCTTTCAAATGAATCGCAGCTGGACGACCGCACAATACATCTTCTTTTCAGTGCTAACAGATGGGAGAAGAGATCATTAATGGAAACTAAATTGAAGAGTGGAACCACTCTTATTGTTGATCGGTATTCTTATTCAGGGGTGACCTATTCATCTGCCAAAGGACTTGGCATCGAATGGTGTAAGGCACCGGAGGTTGGCTTGTTAGCTCCGGACCTCGTACTGTACCTCGACATATCTCCAGAGAAAGCTGCAGAAAGAGGAGGTTATGGATGTGAGAGGTATGAGCAGCTTGAGTTCCAGAGCAAAGTTGCCCAATATTATCAAATGTTGCACGATTCTTCTTGGAAGATCATCAATGCTTGCCAACCCATGGAAGATATTGAGAAAGAACTACAAGAGATTGTACTTGGCTGTGTCAAGAGATGCCACAATGGGGAGCCGCTTTCCCAGCTTTGGTTAAGTGGCATGGGCACTAATGGCTCATTGAAACCAGTATCTGGTGCTGGTGGTGCAGACACAAAGGGAAATGGATCCTGTGAAACGTCTGGAACTTCAGGAACCAAGGGAGGTGGAAGAAATGTAATAGGAGGAATCGTGAAAGGTGCCACCAGCGGAGGTGAGAAAGTTACTAAAGGTGTTGGAGTTGAAAATAATGGTGGTGGTGAAGGAACTAGAGGTGGTGGAAACCAGGTTAAAGGTAAAATAACGGCGGTGGCGGTGATGGAACCAAGGGTGATGGGGGAGAAGGAGATGGAGTTTCCGGTGGCTGTGACGGTGTTTCGAGAAAAGGAGGGGGAGAGGGAACTAAGGGAGCTGGCTGCTGATAAACTGGAGGGGGAGAAGAAACTAAAGGAGGCAGAGAAGGTCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGTATGTTGGGAAAGGCCACTGGCCACATGATCCAAATAAGTATTGGTAAAATGGATCACAGTTAGATCTTCTGTTTCTGCTTCTCTTTTCTTCATGTGGATTTTGCTTCTGTACAGTATCTGCTTCTACAAGTGCTTGGAAAATCAGCAGCAGAGCTACAAAAGATGTTATCCCTATGCACAGAAGGAATTAATAGTCACAGCTCTCAATGCTAAGAGAAGGGTGGGAAGCAAGGAC

Coding sequence (CDS)

ATGCTTGCTCCCACATTTTGTAAGCCATTGAGTTTTGGAGTAGTAACAGCGAGAAGATCCTCAAGTTCTCTTCTTGAAGTTTCATCTAAGAATTTGATCCGGAAGATTCAAATGGGAACTAATCAGAACTCTGTACTAAGAAGTTGCAACAGTAACTCGAGAGGAGCATTGGTGGTTCTAGAAGGTTTGGACCGTTGTGGGAAGAGTACGCAGTCCAGTAGATTAGTCCAGTACTTGGAAGGACTTGGTCATTCTGCTGAACTATGGCGGTTTCCAGACAGAACTACAAGTGTTGGACAAATGATATCATCTTATCTTTCAAATGAATCGCAGCTGGACGACCGCACAATACATCTTCTTTTCAGTGCTAACAGATGGGAGAAGAGATCATTAATGGAAACTAAATTGAAGAGTGGAACCACTCTTATTGTTGATCGGTATTCTTATTCAGGGGTGACCTATTCATCTGCCAAAGGACTTGGCATCGAATGGTGTAAGGCACCGGAGGTTGGCTTGTTAGCTCCGGACCTCGTACTGTACCTCGACATATCTCCAGAGAAAGCTGCAGAAAGAGGAGGTTATGGATGTGAGAGGTATGAGCAGCTTGAGTTCCAGAGCAAAGTTGCCCAATATTATCAAATGTTGCACGATTCTTCTTGGAAGATCATCAATGCTTGCCAACCCATGGAAGATATTGAGAAAGAACTACAAGAGATTGTACTTGGCTGTGTCAAGAGATGCCACAATGGGGAGCCGCTTTCCCAGCTTTGGTTAAGTGGCATGGGCACTAATGGCTCATTGAAACCAGTATCTGGTGCTGGTGGTGCAGACACAAAGGGAAATGGATCCTGTGAAACGTCTGGAACTTCAGGAACCAAGGGAGGTGGAAGAAATGTAATAGGAGGAATCGTGAAAGGTGCCACCAGCGGAGGTGAGAAAGTTACTAAAGGTGTTGGAGTTGAAAATAATGGTGGTGGTGAAGGAACTAGAGGTGGTGGAAACCAGGTTAAAGGTAAAATAACGGCGGTGGCGGTGATGGAACCAAGGGTGATGGGGGAGAAGGAGATGGAGTTTCCGGTGGCTGTGACGGTGTTTCGAGAAAAGGAGGGGGAGAGGGAACTAAGGGAGCTGGCTGCTGATAAACTGGAGGGGGAGAAGAAACTAAAGGAGGCAGAGAAGGTCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGTATGTTGGGAAAGGCCACTGGCCACATGATCCAAATAAGTATTGGTAAAATGGATCACAGTTAG

Protein sequence

MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVLEGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLYLDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIVLGCVKRCHNGEPLSQLWLSGMGTNGSLKPVSGAGGADTKGNGSCETSGTSGTKGGGRNVIGGIVKGATSGGEKVTKGVGVENNGGGEGTRGGGNQVKGKITAVAVMEPRVMGEKEMEFPVAVTVFREKEGERELRELAADKLEGEKKLKEAEKVLRVTKMGYLKGMLGKATGHMIQISIGKMDHS

Homology

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BLAST of Sed0009078 vs. NCBI nr
Match: KAG6606822.1 (Thymidylate kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 468.0 bits (1203), Expect = 8.6e-128
Identity = 229/259 (88.42%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVL 60
           MLA T  +PLSF  V ARRSSS +L+VSSK  IR IQMGTNQNS+L+ CNSNSRGALVVL
Sbjct: 525 MLASTIYRPLSFEAVIARRSSSFILKVSSKAFIRNIQMGTNQNSILQGCNSNSRGALVVL 584

Query: 61  EGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLL 120
           EGLDRCGK+TQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSN+SQLDD TIHLL
Sbjct: 585 EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNKSQLDDHTIHLL 644

Query: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLY 180
           FSANRWEKRSLMETKLKSGTTLIVDRYSYSGV +SSAKGLGIEWCKAPEVGLLAPDLVLY
Sbjct: 645 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLGIEWCKAPEVGLLAPDLVLY 704

Query: 181 LDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIV 240
           L+ISPEKA+ERGGYGCERYEQLEFQSKVAQYYQ+LHDSSWK+I+ACQPMEDIEK+LQE+V
Sbjct: 705 LNISPEKASERGGYGCERYEQLEFQSKVAQYYQVLHDSSWKVIDACQPMEDIEKQLQEMV 764

Query: 241 LGCVKRCHNGEPLSQLWLS 260
           L CVK+CHNGEPLSQLWLS
Sbjct: 765 LECVKKCHNGEPLSQLWLS 783

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BLAST of Sed0009078 vs. NCBI nr
Match: XP_022998308.1 (thymidylate kinase isoform X1 [Cucurbita maxima])

HSP 1 Score: 466.8 bits (1200), Expect = 1.9e-127
Identity = 228/259 (88.03%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVL 60
           MLA T  +PLSF  V AR+SSS +L+VSSK  IR IQMGTNQNS+L+ CNSNSRGALVVL
Sbjct: 1   MLASTIYRPLSFEAVIARKSSSFILKVSSKAFIRNIQMGTNQNSILQGCNSNSRGALVVL 60

Query: 61  EGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLL 120
           EGLDRCGK+TQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSN+SQLDD TIHLL
Sbjct: 61  EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNKSQLDDHTIHLL 120

Query: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLY 180
           FSANRWEKRSLMETKLKSGTTLIVDRYSYSGV +SSAKGLGIEWCKAPEVGLLAPDLVLY
Sbjct: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLGIEWCKAPEVGLLAPDLVLY 180

Query: 181 LDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIV 240
           L+ISPEKA+ERGGYGCERYEQLEFQSKVAQYYQ+LHDSSWK+I+ACQPMEDIEK+LQE+V
Sbjct: 181 LNISPEKASERGGYGCERYEQLEFQSKVAQYYQVLHDSSWKVIDACQPMEDIEKQLQEMV 240

Query: 241 LGCVKRCHNGEPLSQLWLS 260
           L CVK+CHNGEPLSQLWLS
Sbjct: 241 LECVKKCHNGEPLSQLWLS 259

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BLAST of Sed0009078 vs. NCBI nr
Match: XP_022948490.1 (thymidylate kinase isoform X1 [Cucurbita moschata])

HSP 1 Score: 465.7 bits (1197), Expect = 4.3e-127
Identity = 228/259 (88.03%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVL 60
           MLA T  +PLSF  V ARRSSS +L+VSSK  IR IQMGTNQNS+L+ CNSNSRGALVVL
Sbjct: 1   MLASTIYRPLSFEAVIARRSSSFILKVSSKAFIRNIQMGTNQNSILQGCNSNSRGALVVL 60

Query: 61  EGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLL 120
           EGLDRCGK+TQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSN+SQLDD TIHLL
Sbjct: 61  EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNKSQLDDHTIHLL 120

Query: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLY 180
           FSANRWEKRS METKLKSGTTLIVDRYSYSGV +SSAKGLGIEWCKAPEVGLLAPDLVLY
Sbjct: 121 FSANRWEKRSSMETKLKSGTTLIVDRYSYSGVAFSSAKGLGIEWCKAPEVGLLAPDLVLY 180

Query: 181 LDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIV 240
           L+ISPEKA+ERGGYGCERYEQLEFQSKVAQYYQ+LHDSSWK+I+ACQPMEDIEK+LQE+V
Sbjct: 181 LNISPEKASERGGYGCERYEQLEFQSKVAQYYQVLHDSSWKVIDACQPMEDIEKQLQEMV 240

Query: 241 LGCVKRCHNGEPLSQLWLS 260
           L CVK+CHNGEPLSQLWLS
Sbjct: 241 LECVKKCHNGEPLSQLWLS 259

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BLAST of Sed0009078 vs. NCBI nr
Match: XP_023523991.1 (thymidylate kinase isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464.5 bits (1194), Expect = 9.6e-127
Identity = 226/259 (87.26%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVL 60
           MLA T  +PLSF  V ARRSSS +L++SSK  IR IQMGTNQNS+L+ CNSNSRGALVVL
Sbjct: 1   MLASTIYRPLSFEAVIARRSSSFILKISSKAFIRNIQMGTNQNSILQGCNSNSRGALVVL 60

Query: 61  EGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLL 120
           EGLDRCGK+TQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSN+SQLDD TIHLL
Sbjct: 61  EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNKSQLDDHTIHLL 120

Query: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLY 180
           FSANRWEKRSLMETKLKSGTTLIVDRYSYSGV +SSAKGLGIEWCKAPEVGLLAPDLVLY
Sbjct: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLGIEWCKAPEVGLLAPDLVLY 180

Query: 181 LDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIV 240
           L+ISPEKA+ERGGYGCERYEQLEFQSKV QYYQ+LHDSSWK+I+ACQPMEDIEK+LQE+V
Sbjct: 181 LNISPEKASERGGYGCERYEQLEFQSKVDQYYQVLHDSSWKVIDACQPMEDIEKQLQEMV 240

Query: 241 LGCVKRCHNGEPLSQLWLS 260
           L CVK+CHNGEP+SQLWLS
Sbjct: 241 LECVKKCHNGEPISQLWLS 259

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BLAST of Sed0009078 vs. NCBI nr
Match: XP_022153422.1 (thymidylate kinase-like isoform X1 [Momordica charantia])

HSP 1 Score: 463.4 bits (1191), Expect = 2.1e-126
Identity = 229/250 (91.60%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 10  LSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVLEGLDRCGKS 69
           LSFG VTARRSSS+LL++ S NLIRKIQMGTN NSVLR C+SNSRGALVVLEGLDRCGK+
Sbjct: 7   LSFGAVTARRSSSALLKIPSNNLIRKIQMGTNHNSVLRGCSSNSRGALVVLEGLDRCGKT 66

Query: 70  TQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLLFSANRWEKR 129
           TQSSRLVQYLEGLGHSAEL RFPDRTTSVGQMISSYLSNESQLDD TIHLLFSANRWEKR
Sbjct: 67  TQSSRLVQYLEGLGHSAELLRFPDRTTSVGQMISSYLSNESQLDDHTIHLLFSANRWEKR 126

Query: 130 SLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLYLDISPEKAA 189
           SLMETKLKSGTTLIVDRYSYSGV +S+AKGLGIEWCKAPEVGLLAPDLVLYLDISPEKA 
Sbjct: 127 SLMETKLKSGTTLIVDRYSYSGVAFSAAKGLGIEWCKAPEVGLLAPDLVLYLDISPEKAV 186

Query: 190 ERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIVLGCVKRCHN 249
           ERGGYGCERYEQLEFQSKVAQYYQ+LHDSSWKII+ACQPMEDIEK+LQEIVLGCVKR HN
Sbjct: 187 ERGGYGCERYEQLEFQSKVAQYYQVLHDSSWKIIDACQPMEDIEKQLQEIVLGCVKRRHN 246

Query: 250 GEPLSQLWLS 260
           GEPLS+LWLS
Sbjct: 247 GEPLSELWLS 256

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BLAST of Sed0009078 vs. ExPASy Swiss-Prot
Match: Q0WW55 (Thymidylate kinase OS=Arabidopsis thaliana OX=3702 GN=ZEU1 PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.7e-89
Identity = 165/249 (66.27%), Postives = 197/249 (79.12%), Query Frame = 0


Query: 11  SFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVLEGLDRCGKST 70
           SF  + + RS +  L+   ++ +R ++     + V    +   RGAL+VLEGLDR GKST
Sbjct: 16  SFRALASPRSLNYPLQCIKRSSVR-MESSNFSSGVRTESSVKPRGALIVLEGLDRSGKST 75

Query: 71  QSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLLFSANRWEKRS 130
           Q ++L+ +L GLGH  ELWRFPDR TSVGQMIS+YLSN+SQLDD TIHLLFSANRWEKRS
Sbjct: 76  QCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLDDHTIHLLFSANRWEKRS 135

Query: 131 LMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLYLDISPEKAAE 190
           LME KLK+GTTLIVDRYSYSGV +SSAKGL IEWCKAPE+GLLAPD VLYLDISPE+AAE
Sbjct: 136 LMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLYLDISPERAAE 195

Query: 191 RGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIVLGCVKRCHNG 250
           RGGYG ERYE++EFQ KVA +YQ L DSSWKIINA   ME++EK++Q++VL  VK C  G
Sbjct: 196 RGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVEKKIQQVVLDQVKECTEG 255

Query: 251 EPLSQLWLS 260
           +PLS LW S
Sbjct: 256 KPLSLLWSS 263

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BLAST of Sed0009078 vs. ExPASy Swiss-Prot
Match: P23919 (Thymidylate kinase OS=Homo sapiens OX=9606 GN=DTYMK PE=1 SV=4)

HSP 1 Score: 201.1 bits (510), Expect = 2.6e-50
Identity = 96/208 (46.15%), Postives = 148/208 (71.15%), Query Frame = 0


Query: 54  RGALVVLEGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLD 113
           RGAL+VLEG+DR GKSTQS +LV+ L   GH AEL RFP+R+T +G+++SSYL  +S ++
Sbjct: 5   RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64

Query: 114 DRTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAK-GLGIEWCKAPEVGL 173
           D ++HLLFSANRWE+  L++ KL  G TL+VDRY++SGV ++ AK    ++WCK P+VGL
Sbjct: 65  DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124

Query: 174 LAPDLVLYLDISPEKAAERGGYGCERYEQLEFQSKVAQ-YYQMLHDS--SWKIINACQPM 233
             PDLVL+L +    AA+RG +G ERYE   FQ +  + ++Q++ D+  +WK+++A + +
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184

Query: 234 EDIEKELQEIVLGCVKRCHNGEPLSQLW 258
           E + ++++ +    + R    +PL +LW
Sbjct: 185 EAVHEDIRVLSEDAI-RTATEKPLGELW 211

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BLAST of Sed0009078 vs. ExPASy Swiss-Prot
Match: P97930 (Thymidylate kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 6.4e-49
Identity = 93/211 (44.08%), Postives = 144/211 (68.25%), Query Frame = 0


Query: 51  SNSRGALVVLEGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNES 110
           ++ RGAL+VLEG+DR GK+TQ  +LV  L   GH AEL RFP+R+T +G++++SYL  ++
Sbjct: 2   ASRRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKT 61

Query: 111 QLDDRTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAK-GLGIEWCKAPE 170
           +L+D ++HLLFSANRWE+  L++ KL  G TL++DRY++SGV ++ AK    ++WCK P+
Sbjct: 62  ELEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGVAFTGAKENFSLDWCKQPD 121

Query: 171 VGLLAPDLVLYLDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDS---SWKIINAC 230
           VGL  PDL+L+L +    AA RG +G ERYE   FQ +V   +Q L +    +WK+++A 
Sbjct: 122 VGLPKPDLILFLQLQLLDAAARGEFGLERYETGTFQKQVLLCFQQLMEEKNLNWKVVDAS 181

Query: 231 QPMEDIEKELQEIVLGCVKRCHNGEPLSQLW 258
           + +E++ KE++      ++      PL +LW
Sbjct: 182 KSIEEVHKEIRAHSEDAIRNAAQ-RPLGELW 211

[Close]

BLAST of Sed0009078 vs. ExPASy Swiss-Prot
Match: Q54GN2 (Thymidylate kinase OS=Dictyostelium discoideum OX=44689 GN=dtymk PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.3e-49
Identity = 95/188 (50.53%), Postives = 127/188 (67.55%), Query Frame = 0


Query: 54  RGALVVLEGLDRCGKSTQSSRLVQYLEGLGH-SAELWRFPDRTTSVGQMISSYLSNESQL 113
           RG  ++ EG+DR GKSTQ   L  ++  +     +  RFPDRTT +GQ+I+ YL N + +
Sbjct: 18  RGLFILFEGVDRVGKSTQVQSLTNHISNVQKLPTKSLRFPDRTTPIGQIINQYLQNATNM 77

Query: 114 DDRTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGL 173
           DDR +HLLFS+NRWE R  +   L +GT ++VDRYSYSGV YS+AKG+  +WC A E GL
Sbjct: 78  DDRALHLLFSSNRWEARDSILELLNNGTNIVVDRYSYSGVAYSAAKGIDFDWCYACEKGL 137

Query: 174 LAPDLVLYLDISPEKAAERGGYGCERYEQLEFQSKVAQYY-QMLHDSSWKIINACQPMED 233
             PDL+ YL +S E A +RG YG ERYE+LEFQ K+ Q Y + L D  WKIINA + +++
Sbjct: 138 PKPDLIFYLSMSSEDATKRGEYGGERYEKLEFQKKIKQIYEEKLVDDQWKIINANRSIDE 197

Query: 234 IEKELQEI 240
           I  E+  I
Sbjct: 198 ISNEISSI 205

[Close]

BLAST of Sed0009078 vs. ExPASy Swiss-Prot
Match: P36590 (Thymidylate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tmp1 PE=2 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-45
Identity = 90/197 (45.69%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 50  NSNSRGALVVLEGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNE 109
           +  +RG L+V+EGLDR GKSTQ   LV  L      AEL++FPDRTT++G+ I  YL   
Sbjct: 2   SKQNRGRLIVIEGLDRSGKSTQCQLLVDKLISQHEKAELFKFPDRTTAIGKKIDDYLKES 61

Query: 110 SQLDDRTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPE 169
            QL+D+ IHLLFSANRWE    +  ++  G T I+DRY++SG+ +S+AKGL  EWCK+P+
Sbjct: 62  VQLNDQVIHLLFSANRWETIQYIYEQINKGVTCILDRYAFSGIAFSAAKGLDWEWCKSPD 121

Query: 170 VGLLAPDLVLYLDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDS------SWKII 229
            GL  PDLV++L++ P  AA RG YG ERYE++E Q KV + +Q L          +  +
Sbjct: 122 RGLPRPDLVIFLNVDPRIAATRGQYGEERYEKIEMQEKVLKNFQRLQKEFREEGLEFITL 181

Query: 230 NACQPMEDIEKELQEIV 241
           +A   +ED+  ++ ++V
Sbjct: 182 DASSSLEDVHSQIVDLV 198

[Close]

BLAST of Sed0009078 vs. ExPASy TrEMBL
Match: A0A6J1KGD6 (dTMP kinase OS=Cucurbita maxima OX=3661 GN=LOC111492984 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 9.3e-128
Identity = 228/259 (88.03%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVL 60
           MLA T  +PLSF  V AR+SSS +L+VSSK  IR IQMGTNQNS+L+ CNSNSRGALVVL
Sbjct: 1   MLASTIYRPLSFEAVIARKSSSFILKVSSKAFIRNIQMGTNQNSILQGCNSNSRGALVVL 60

Query: 61  EGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLL 120
           EGLDRCGK+TQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSN+SQLDD TIHLL
Sbjct: 61  EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNKSQLDDHTIHLL 120

Query: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLY 180
           FSANRWEKRSLMETKLKSGTTLIVDRYSYSGV +SSAKGLGIEWCKAPEVGLLAPDLVLY
Sbjct: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLGIEWCKAPEVGLLAPDLVLY 180

Query: 181 LDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIV 240
           L+ISPEKA+ERGGYGCERYEQLEFQSKVAQYYQ+LHDSSWK+I+ACQPMEDIEK+LQE+V
Sbjct: 181 LNISPEKASERGGYGCERYEQLEFQSKVAQYYQVLHDSSWKVIDACQPMEDIEKQLQEMV 240

Query: 241 LGCVKRCHNGEPLSQLWLS 260
           L CVK+CHNGEPLSQLWLS
Sbjct: 241 LECVKKCHNGEPLSQLWLS 259

[Close]

BLAST of Sed0009078 vs. ExPASy TrEMBL
Match: A0A6J1G9Z9 (dTMP kinase OS=Cucurbita moschata OX=3662 GN=LOC111452153 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 2.1e-127
Identity = 228/259 (88.03%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVL 60
           MLA T  +PLSF  V ARRSSS +L+VSSK  IR IQMGTNQNS+L+ CNSNSRGALVVL
Sbjct: 1   MLASTIYRPLSFEAVIARRSSSFILKVSSKAFIRNIQMGTNQNSILQGCNSNSRGALVVL 60

Query: 61  EGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLL 120
           EGLDRCGK+TQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSN+SQLDD TIHLL
Sbjct: 61  EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNKSQLDDHTIHLL 120

Query: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLY 180
           FSANRWEKRS METKLKSGTTLIVDRYSYSGV +SSAKGLGIEWCKAPEVGLLAPDLVLY
Sbjct: 121 FSANRWEKRSSMETKLKSGTTLIVDRYSYSGVAFSSAKGLGIEWCKAPEVGLLAPDLVLY 180

Query: 181 LDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIV 240
           L+ISPEKA+ERGGYGCERYEQLEFQSKVAQYYQ+LHDSSWK+I+ACQPMEDIEK+LQE+V
Sbjct: 181 LNISPEKASERGGYGCERYEQLEFQSKVAQYYQVLHDSSWKVIDACQPMEDIEKQLQEMV 240

Query: 241 LGCVKRCHNGEPLSQLWLS 260
           L CVK+CHNGEPLSQLWLS
Sbjct: 241 LECVKKCHNGEPLSQLWLS 259

[Close]

BLAST of Sed0009078 vs. ExPASy TrEMBL
Match: A0A6J1DIU8 (dTMP kinase OS=Momordica charantia OX=3673 GN=LOC111020933 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 1.0e-126
Identity = 229/250 (91.60%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 10  LSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVLEGLDRCGKS 69
           LSFG VTARRSSS+LL++ S NLIRKIQMGTN NSVLR C+SNSRGALVVLEGLDRCGK+
Sbjct: 7   LSFGAVTARRSSSALLKIPSNNLIRKIQMGTNHNSVLRGCSSNSRGALVVLEGLDRCGKT 66

Query: 70  TQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLLFSANRWEKR 129
           TQSSRLVQYLEGLGHSAEL RFPDRTTSVGQMISSYLSNESQLDD TIHLLFSANRWEKR
Sbjct: 67  TQSSRLVQYLEGLGHSAELLRFPDRTTSVGQMISSYLSNESQLDDHTIHLLFSANRWEKR 126

Query: 130 SLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLYLDISPEKAA 189
           SLMETKLKSGTTLIVDRYSYSGV +S+AKGLGIEWCKAPEVGLLAPDLVLYLDISPEKA 
Sbjct: 127 SLMETKLKSGTTLIVDRYSYSGVAFSAAKGLGIEWCKAPEVGLLAPDLVLYLDISPEKAV 186

Query: 190 ERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIVLGCVKRCHN 249
           ERGGYGCERYEQLEFQSKVAQYYQ+LHDSSWKII+ACQPMEDIEK+LQEIVLGCVKR HN
Sbjct: 187 ERGGYGCERYEQLEFQSKVAQYYQVLHDSSWKIIDACQPMEDIEKQLQEIVLGCVKRRHN 246

Query: 250 GEPLSQLWLS 260
           GEPLS+LWLS
Sbjct: 247 GEPLSELWLS 256

[Close]

BLAST of Sed0009078 vs. ExPASy TrEMBL
Match: A0A6J1DDX5 (dTMP kinase OS=Momordica charantia OX=3673 GN=LOC111019882 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 4.8e-124
Identity = 228/259 (88.03%), Postives = 241/259 (93.05%), Query Frame = 0


Query: 1   MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVL 60
           MLA TF KPLSF  VTARRSSSS L++ SKN I+KIQMGTNQNSVLR C+SNSRGALVVL
Sbjct: 1   MLAFTFHKPLSFRAVTARRSSSSPLKIPSKNSIQKIQMGTNQNSVLRGCSSNSRGALVVL 60

Query: 61  EGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLL 120
           EGLDRCGK+TQSSRLVQYLEGLG SAELWRFPDRTTSVGQMISSYLSN+SQLDDRTIHLL
Sbjct: 61  EGLDRCGKTTQSSRLVQYLEGLGFSAELWRFPDRTTSVGQMISSYLSNKSQLDDRTIHLL 120

Query: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLY 180
           FSANRWEKRSLME+KLKSGTTLIVDRYSYSGV +S+AKGL IEWCKAPEVGLLA D VLY
Sbjct: 121 FSANRWEKRSLMESKLKSGTTLIVDRYSYSGVAFSAAKGLDIEWCKAPEVGLLASDSVLY 180

Query: 181 LDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIV 240
           LDISPE AAERGGYG ERYEQLEFQ KV QYYQ+LHDSSWKII+ACQ MEDIEK+LQEIV
Sbjct: 181 LDISPENAAERGGYGRERYEQLEFQRKVYQYYQVLHDSSWKIIDACQTMEDIEKQLQEIV 240

Query: 241 LGCVKRCHNGEPLSQLWLS 260
           LGCVKRCHNGEPLS+LWLS
Sbjct: 241 LGCVKRCHNGEPLSELWLS 259

[Close]

BLAST of Sed0009078 vs. ExPASy TrEMBL
Match: A0A6J1DDX9 (dTMP kinase OS=Momordica charantia OX=3673 GN=LOC111019882 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.7e-121
Identity = 226/259 (87.26%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 1   MLAPTFCKPLSFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVL 60
           MLA TF KPL+   VTARRSSSS L++ SKN I+KIQMGTNQNSVLR C+SNSRGALVVL
Sbjct: 1   MLAFTFHKPLA---VTARRSSSSPLKIPSKNSIQKIQMGTNQNSVLRGCSSNSRGALVVL 60

Query: 61  EGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLL 120
           EGLDRCGK+TQSSRLVQYLEGLG SAELWRFPDRTTSVGQMISSYLSN+SQLDDRTIHLL
Sbjct: 61  EGLDRCGKTTQSSRLVQYLEGLGFSAELWRFPDRTTSVGQMISSYLSNKSQLDDRTIHLL 120

Query: 121 FSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLY 180
           FSANRWEKRSLME+KLKSGTTLIVDRYSYSGV +S+AKGL IEWCKAPEVGLLA D VLY
Sbjct: 121 FSANRWEKRSLMESKLKSGTTLIVDRYSYSGVAFSAAKGLDIEWCKAPEVGLLASDSVLY 180

Query: 181 LDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIV 240
           LDISPE AAERGGYG ERYEQLEFQ KV QYYQ+LHDSSWKII+ACQ MEDIEK+LQEIV
Sbjct: 181 LDISPENAAERGGYGRERYEQLEFQRKVYQYYQVLHDSSWKIIDACQTMEDIEKQLQEIV 240

Query: 241 LGCVKRCHNGEPLSQLWLS 260
           LGCVKRCHNGEPLS+LWLS
Sbjct: 241 LGCVKRCHNGEPLSELWLS 256

[Close]

BLAST of Sed0009078 vs. TAIR 10
Match: AT5G59440.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-90
Identity = 165/249 (66.27%), Postives = 197/249 (79.12%), Query Frame = 0


Query: 11  SFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVLEGLDRCGKST 70
           SF  + + RS +  L+   ++ +R ++     + V    +   RGAL+VLEGLDR GKST
Sbjct: 16  SFRALASPRSLNYPLQCIKRSSVR-MESSNFSSGVRTESSVKPRGALIVLEGLDRSGKST 75

Query: 71  QSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLLFSANRWEKRS 130
           Q ++L+ +L GLGH  ELWRFPDR TSVGQMIS+YLSN+SQLDD TIHLLFSANRWEKRS
Sbjct: 76  QCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLDDHTIHLLFSANRWEKRS 135

Query: 131 LMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLYLDISPEKAAE 190
           LME KLK+GTTLIVDRYSYSGV +SSAKGL IEWCKAPE+GLLAPD VLYLDISPE+AAE
Sbjct: 136 LMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLYLDISPERAAE 195

Query: 191 RGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIVLGCVKRCHNG 250
           RGGYG ERYE++EFQ KVA +YQ L DSSWKIINA   ME++EK++Q++VL  VK C  G
Sbjct: 196 RGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVEKKIQQVVLDQVKECTEG 255

Query: 251 EPLSQLWLS 260
           +PLS LW S
Sbjct: 256 KPLSLLWSS 263

[Close]

BLAST of Sed0009078 vs. TAIR 10
Match: AT5G59440.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-90
Identity = 165/249 (66.27%), Postives = 197/249 (79.12%), Query Frame = 0


Query: 11  SFGVVTARRSSSSLLEVSSKNLIRKIQMGTNQNSVLRSCNSNSRGALVVLEGLDRCGKST 70
           SF  + + RS +  L+   ++ +R ++     + V    +   RGAL+VLEGLDR GKST
Sbjct: 24  SFRALASPRSLNYPLQCIKRSSVR-MESSNFSSGVRTESSVKPRGALIVLEGLDRSGKST 83

Query: 71  QSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESQLDDRTIHLLFSANRWEKRS 130
           Q ++L+ +L GLGH  ELWRFPDR TSVGQMIS+YLSN+SQLDD TIHLLFSANRWEKRS
Sbjct: 84  QCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLDDHTIHLLFSANRWEKRS 143

Query: 131 LMETKLKSGTTLIVDRYSYSGVTYSSAKGLGIEWCKAPEVGLLAPDLVLYLDISPEKAAE 190
           LME KLK+GTTLIVDRYSYSGV +SSAKGL IEWCKAPE+GLLAPD VLYLDISPE+AAE
Sbjct: 144 LMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLYLDISPERAAE 203

Query: 191 RGGYGCERYEQLEFQSKVAQYYQMLHDSSWKIINACQPMEDIEKELQEIVLGCVKRCHNG 250
           RGGYG ERYE++EFQ KVA +YQ L DSSWKIINA   ME++EK++Q++VL  VK C  G
Sbjct: 204 RGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVEKKIQQVVLDQVKECTEG 263

Query: 251 EPLSQLWLS 260
           +PLS LW S
Sbjct: 264 KPLSLLWSS 271

[Close]

BLAST of Sed0009078 vs. TAIR 10
Match: AT5G59440.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 329.3 bits (843), Expect = 4.5e-90
Identity = 162/221 (73.30%), Postives = 188/221 (85.07%), Query Frame = 0


Query: 40  TNQNSVLRSCNS-NSRGALVVLEGLDRCGKSTQSSRLVQYLEGLGHSAELWRFPDRTTSV 99
           +N +S +R+ +S   RGAL+VLEGLDR GKSTQ ++L+ +L GLGH  ELWRFPDR TSV
Sbjct: 4   SNFSSGVRTESSVKPRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSV 63

Query: 100 GQMISSYLSNESQLDDRTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVTYSSAK 159
           GQMIS+YLSN+SQLDD TIHLLFSANRWEKRSLME KLK+GTTLIVDRYSYSGV +SSAK
Sbjct: 64  GQMISAYLSNKSQLDDHTIHLLFSANRWEKRSLMEEKLKTGTTLIVDRYSYSGVAFSSAK 123

Query: 160 GLGIEWCKAPEVGLLAPDLVLYLDISPEKAAERGGYGCERYEQLEFQSKVAQYYQMLHDS 219
           GL IEWCKAPE+GLLAPD VLYLDISPE+AAERGGYG ERYE++EFQ KVA +YQ L DS
Sbjct: 124 GLDIEWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQTLGDS 183

Query: 220 SWKIINACQPMEDIEKELQEIVLGCVKRCHNGEPLSQLWLS 260
           SWKIINA   ME++EK++Q++VL  VK C  G+PLS LW S
Sbjct: 184 SWKIINASDAMEEVEKKIQQVVLDQVKECTEGKPLSLLWSS 224

The following BLAST results are available for this feature:

BLAST of Sed0009078 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606822.1	8.6e-128	88.42	Thymidylate kinase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022998308.1	1.9e-127	88.03	thymidylate kinase isoform X1 [Cucurbita maxima]	[more]
XP_022948490.1	4.3e-127	88.03	thymidylate kinase isoform X1 [Cucurbita moschata]	[more]
XP_023523991.1	9.6e-127	87.26	thymidylate kinase isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022153422.1	2.1e-126	91.60	thymidylate kinase-like isoform X1 [Momordica charantia]	[more]

BLAST of Sed0009078 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WW55	1.7e-89	66.27	Thymidylate kinase OS=Arabidopsis thaliana OX=3702 GN=ZEU1 PE=2 SV=1	[more]
P23919	2.6e-50	46.15	Thymidylate kinase OS=Homo sapiens OX=9606 GN=DTYMK PE=1 SV=4	[more]
P97930	6.4e-49	44.08	Thymidylate kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=2	[more]
Q54GN2	8.3e-49	50.53	Thymidylate kinase OS=Dictyostelium discoideum OX=44689 GN=dtymk PE=3 SV=1	[more]
P36590	2.5e-45	45.69	Thymidylate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284...	[more]

BLAST of Sed0009078 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGD6	9.3e-128	88.03	dTMP kinase OS=Cucurbita maxima OX=3661 GN=LOC111492984 PE=3 SV=1	[more]
A0A6J1G9Z9	2.1e-127	88.03	dTMP kinase OS=Cucurbita moschata OX=3662 GN=LOC111452153 PE=3 SV=1	[more]
A0A6J1DIU8	1.0e-126	91.60	dTMP kinase OS=Momordica charantia OX=3673 GN=LOC111020933 PE=3 SV=1	[more]
A0A6J1DDX5	4.8e-124	88.03	dTMP kinase OS=Momordica charantia OX=3673 GN=LOC111019882 PE=3 SV=1	[more]
A0A6J1DDX9	1.7e-121	87.26	dTMP kinase OS=Momordica charantia OX=3673 GN=LOC111019882 PE=3 SV=1	[more]

BLAST of Sed0009078 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59440.1	1.2e-90	66.27	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G59440.3	1.2e-90	66.27	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G59440.2	4.5e-90	73.30	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 374..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..294
None	No IPR available	PANTHER	PTHR10344:SF1	THYMIDYLATE KINASE	coord: 52..255
None	No IPR available	PANTHER	PTHR10344	THYMIDYLATE KINASE	coord: 52..255
None	No IPR available	CDD	cd01672	TMPK	coord: 57..241 e-value: 3.04552E-29 score: 111.206
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 48..258 e-value: 3.1E-68 score: 231.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 54..249
IPR039430	Thymidylate kinase-like domain	PFAM	PF02223	Thymidylate_kin	coord: 60..235 e-value: 1.5E-43 score: 148.6
IPR018094	Thymidylate kinase	TIGRFAM	TIGR00041	TIGR00041	coord: 54..235 e-value: 4.1E-37 score: 125.7
IPR018094	Thymidylate kinase	HAMAP	MF_00165	Thymidylate_kinase	coord: 56..244 score: 15.947947

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009078.1	Sed0009078.1	mRNA
Sed0009078.2	Sed0009078.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006233	dTDP biosynthetic process
biological_process	GO:0046940	nucleoside monophosphate phosphorylation
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004798	thymidylate kinase activity