Sed0009027 (gene) Chayote v1

Overview


Name	Sed0009027
Type	gene
Organism	Sechium edule (Chayote v1)
Description	phospholipase A2-alpha
Location	LG12: 32090716 .. 32095065 (+)
RNA-Seq Expression	Sed0009027
Synteny	Sed0009027

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTTTCCCCAAATCCCTCAATTTCTCTCTTATAGTTTTGTAACCAAAATTCAGATCACCCATTCCTTTGAACAAAAAATAAAATGACTGAATCCCACTCCTTAACTTTGGCTCTCCTCCTCCTCCTTCTCTGCCTCGTCTCGCCCACCCGCGCCCTCAACATTGGCGTTCAACTCATCGATCCCTCGATCACTCTGGTTCTTCTCTCTTCTTTTCTTTTATATCCGTCAGTTTATACATATTTCGACTAACTTTCATTTTTAGGGCAAATTTTTTTTTTATTGAAAATTAACGATTGAGATTCAAAGTCATGACTTTTTTATTTTCCGATGATGTGATTGATGCTCGACAACTTTTGACTATTTTGGGCTAATCAATTGATTTGATCTGCATTCATGTGTATTGTGAACGAATCATGATCAAAATTATTGAATTAAAAAAAAGATTGGTTTGATTTGTGTTGTTGTTATTGTTTGGGTGAAGGGCAAAGAATGCAGTCGAAAATGCGAGTCAGAATTTTGTGCAGGTTGTTATTGTAATTATAATTACAAATTTATTTCTGGGTTTGTTTTTTTTAAAATAATAATTATTAAATTTGGGGTTTTGAATTGAATTGATTTGGCAGTGCCACCATTATTGAGATATGGAAAATATTGTGGGCTAATGTATAGCGGTTGCCCTGGTGAACGCCCATGCGATGGCTTGGATGCTTGTTGTAAGAAGCATGATGATTGTGTTGGTGCAAAAAATAGTGAGTTTTCTCTTTTTTCTCTTTCATTTTTCTAATTTCATGTATAAAAGTAGGAGTGTATGTGGTCTGGATTGAGTTCGGGTTAACGAGATGTTTAGAATCAACTAATATTTTGGGTTGGTTAATCCTCTATCACGTCCAACTCTTGGGGTTGTTTTGTTTGACATATTTAGGTAGGATTTAACTTAAAGAGTTATGTTGAGTAGTTAAAAATTGAGAGTTATAGTTAAAAAATTGTTTGGATATAGTTTTTATGTAGATGTGTTTGAGTCAAAACCTTGTTTAGATGTGGATTTAAAATGAGTAGTTACTTTTAGTAATAACAAAAAAAAAAGATTAAAAATGAGAGGTTAAAAATAAATTATTTTAATTGATTAGAACGAAATGATTAAAAATGAATGGTTAGAAATGATTGATAAATTATAAATTAATGAATGATTAAAAATGAATGGTTAGACTTTTCAAAAAAAAATGAATGATTAGAAATAAGAGTTATTTTTAAAAGTAAAAATGATGAGGAATTAGTAAAAACTCGTTTAGATATAAGTTTTTGAAGAGGAATTGATAAATCCTAAAACTAAATCCTACCTAAATATGTCAAACAAACACCCCCTTGAAAAATATATGGATATAATATAATTATAAGATGTATTTGGGGCGATGAACATGATCAAGAGGGTATTGAAAAATTAAGAATGAAAAGTTCAATTCATAATCGAATATTTTTTTATATTCAAATGTTATGAAATTAGACGATGTCTATTGATAATAATCGAGATGTATAAAAGCTTGCGTGGACTTACACTCACATGTGTGTGTTTCAATGATAAAAAATAAAATATTTAATATAAGAAAAATACAAAATGATTACTAAGAAAATGAAAGGAAAGTGGTAACGAGAGAATAATTGTACTTAACTTAAAAGTGGATAAGAAAGTTATTTTAATTATTATATTCTTGCTCCAAACATACTTAAAAGTAAATTTAAAGGTTATAAATTTAACCCAGATGACTTAATTATTTATATCGAACTAATAACTATCTTGATTCATTAGAAATTTGAAGTAAGGAATTTTATATTTTTTTTTTTTTTTTTTTACCACAAGTGTAGTAAAAGGTTGAGTGGTTATTAATTAGTTTTTCACAGATGTGATAGTCAGATATAGAAATTATTTGCAGAAATTTCTCAAAATAATATATTTGCAGCATAATGTGTGGTTGGCAAATCTATAAAGTTTGGATATGTGAAAATCAATATTTTAAAGTTAAAATATTATTTTCGTCTTTCTTTATTGGAAGTATGTTTTATTTTATTTTCATTCTTTAAAATGCCATTTTTAATTTATATACTTTTAATAAAACATAAAATTTAACGTTAACTTTTCTTAATAATTACCTCTTCTATTTCTATAAAATTTAAAATATGTTTATATTTTGTCTTTTGTACTAAAATTATTATTATTATTATTGAAAAGTTAGGATGAATTATTTTTTTAGGATATAAAGGGATGGGGAGATATGATAATTGAAGTCTAGGGATTAGATTTATAATTCAATCTTTTATTTAGGCTAATAATGTATTATTTTTCCTTTTCAAAAAAAAAAAATAAAAAAATAAAAAAATAAAAATAATGTGCTATTTTGTTCCATCAATAATTTTAAAGTTAGGTTGTTTGATGAGAATGCTAAATTGTCTCTTTATCTGAGTGAACCAAAAAACCTCACATGTATGGTGGCTAAGATGGTCCATATATAGCTTACTTCATAATTAGTTAAATGAAAGTTATTTATTAAAAGAAAACAGGTAAATAGAACTAAATGTTAAATGTTAAATAGAACTAAATGGACCCCAAATTATTCAAAAAAAAAAAAAAAAAAAAAAAAGACCCCAAATTAAAATTTGGAATTGTTCTCCTAATTAAATGGGAGTAGTTTCATACCCAACTCAATTGGTTATCTTCAAGATTTTATTTAGTTATTTTTTTTCATTTTGGTTCTAAATTTTTAAAAATGTCTAATTTGGTTCTTAAAATTTGTAAAGTATATACATTGGCCATATATTTTTTGTTTTGGTTTTGGAAAATTGTGCTTACTTTCACATTTTTTTTTCACCAATATATATATATTTTTTAATGAACTTTTTAAATAAACATTTTATTCCTGGCAATGTTCTAAAAACAAAAACCATTTTTATAAAAAATTGACTTGAATTTTGAATACCCAAAAAAATTAAATAACAAAAGAAAAATATAGGTGGAATTTGAGTTCATAAGTTTAATTAATTATTAAAAACTAAAAAATAATTAGTTACGAGACAACCAATAGGAGAAATACTCTAAACTTAGCAATCAAAAGATTACATGTTTGAATTTGATTATCATTGACTTAATATTAAAAAAAAATCGAGAATCAAAATAGTAATTAGTTTACAAAAACATTGGTATAATAGACATCTACTCCTCCAATACAAAAAATTCAAATTTCATCCCATATTTATTATACTAAAAAAACATCAAAACAAATATTTTAAAATGTTGAAGAAAAGAAAATAACTATTGAGACGACCAGTCACAAATAGGTTAGAAAATGGTTAGATTTATTAAATATTAAATAGGTGGATATTAAAATAATTGATTATAAGTGAAATCCATCCATATGCAATTAAAATTAATGAGCTTTTTTTTGTAGTTCTTTTTGTTTTCTTTAAAACCAAGTTAAAAAAAAAAACATTAGATAATATTCGACGGTTAGTCTAAATATCTTATAAAAATTGTAATTACATCTTTTCATTTTTTCCATACTGAATTTTTGCCCTACTACAAATGAAGGCTTAGATGTTGAACAATTTATTGAAAAAAAGGTGAACATTAAATGTCGAGGGCATACTCGTAATTTAAATGGTGGGATGTGTTTGTGTTTGTAGATGATTATCTAAATGTAGAGTGCAGCCAAAGCTTCATAAATTGCATGAGGTTTTTCAAGAAATCAAAATCACCCTCTTTTGAAGGAAACAAATGTCAAGTTGATGAAGTAATTGATGTCATTTCCTTTGTCATGGATGCTGCCCTTATTGCTGGCACCATTTTTCACAAGCCCTAGCTTTATTTTATAATCTTTTTTCCCCCTTTTTTCTTTATTAACTCATCCATATATATTTTCAATATTAGTTGTTGATTTGGCATACAACAATACTAATGCCACTTTCTTTTATGCTTGCTTGTTTTCCAAATATTGGTTTTGATTTACTTGATATTCTATTTCATTTGAGTATTTATGGTTGTTTGTTTTTGTGTATTTCAATCTAGGAGAATATTGTAGCTAGGGGTGGACCTATGTTGAAATTAGATGACCAAAATTTTAGAGGGTTGGATTTTGGCATTTTGGGGAGAAGAGGAGGGGAAGCGGAGTGATTAAAAAAGATGAAGTACCTGTTTGTGGATTGATGTTATAGAAAGAAGATATTAACAAAATTGTATGGGAATTGATGTTAAGGAGGTAGATGTTTATTTTATATTAATGGACAAAATGTCTAGCAGTTCAAAATTGCCATAGATATAAATTTTTTGAGTTTTTTTTCTCAATAATTTGATTATTTAT

mRNA sequence

TTTCTTTTCCCCAAATCCCTCAATTTCTCTCTTATAGTTTTGTAACCAAAATTCAGATCACCCATTCCTTTGAACAAAAAATAAAATGACTGAATCCCACTCCTTAACTTTGGCTCTCCTCCTCCTCCTTCTCTGCCTCGTCTCGCCCACCCGCGCCCTCAACATTGGCGTTCAACTCATCGATCCCTCGATCACTCTGGGCAAAGAATGCAGTCGAAAATGCGAGTCAGAATTTTGTGCAGTGCCACCATTATTGAGATATGGAAAATATTGTGGGCTAATGTATAGCGGTTGCCCTGGTGAACGCCCATGCGATGGCTTGGATGCTTGTTGTAAGAAGCATGATGATTGTGTTGGTGCAAAAAATAATGATTATCTAAATGTAGAGTGCAGCCAAAGCTTCATAAATTGCATGAGGTTTTTCAAGAAATCAAAATCACCCTCTTTTGAAGGAAACAAATGTCAAGTTGATGAAGTAATTGATGTCATTTCCTTTGTCATGGATGCTGCCCTTATTGCTGGCACCATTTTTCACAAGCCCTAGCTTTATTTTATAATCTTTTTTCCCCCTTTTTTCTTTATTAACTCATCCATATATATTTTCAATATTAGTTGTTGATTTGGCATACAACAATACTAATGCCACTTTCTTTTATGCTTGCTTGTTTTCCAAATATTGGTTTTGATTTACTTGATATTCTATTTCATTTGAGTATTTATGGTTGTTTGTTTTTGTGTATTTCAATCTAGGAGAATATTGTAGCTAGGGGTGGACCTATGTTGAAATTAGATGACCAAAATTTTAGAGGGTTGGATTTTGGCATTTTGGGGAGAAGAGGAGGGGAAGCGGAGTGATTAAAAAAGATGAAGTACCTGTTTGTGGATTGATGTTATAGAAAGAAGATATTAACAAAATTGTATGGGAATTGATGTTAAGGAGGTAGATGTTTATTTTATATTAATGGACAAAATGTCTAGCAGTTCAAAATTGCCATAGATATAAATTTTTTGAGTTTTTTTTCTCAATAATTTGATTATTTAT

Coding sequence (CDS)

ATGACTGAATCCCACTCCTTAACTTTGGCTCTCCTCCTCCTCCTTCTCTGCCTCGTCTCGCCCACCCGCGCCCTCAACATTGGCGTTCAACTCATCGATCCCTCGATCACTCTGGGCAAAGAATGCAGTCGAAAATGCGAGTCAGAATTTTGTGCAGTGCCACCATTATTGAGATATGGAAAATATTGTGGGCTAATGTATAGCGGTTGCCCTGGTGAACGCCCATGCGATGGCTTGGATGCTTGTTGTAAGAAGCATGATGATTGTGTTGGTGCAAAAAATAATGATTATCTAAATGTAGAGTGCAGCCAAAGCTTCATAAATTGCATGAGGTTTTTCAAGAAATCAAAATCACCCTCTTTTGAAGGAAACAAATGTCAAGTTGATGAAGTAATTGATGTCATTTCCTTTGTCATGGATGCTGCCCTTATTGCTGGCACCATTTTTCACAAGCCCTAG

Protein sequence

MTESHSLTLALLLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFEGNKCQVDEVIDVISFVMDAALIAGTIFHKP

Homology

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BLAST of Sed0009027 vs. NCBI nr
Match: XP_022135104.1 (phospholipase A2-alpha [Momordica charantia])

HSP 1 Score: 244.6 bits (623), Expect = 5.6e-61
Identity = 116/155 (74.84%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   MTESHSLTLALLLL---LLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLL 60
           M+   +L   LLLL   LLCL  P RALNIGVQ ID SI+L K+CSRKCESEFC+VPP L
Sbjct: 1   MSRFQALLKLLLLLSSSLLCLSVPARALNIGVQAIDASISLSKDCSRKCESEFCSVPPFL 60

Query: 61  RYGKYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSK 120
           RYGKYCGL+YSGCPGERPCDGLDACC KHDDCV AKNNDYL+ ECSQSF+NCM  FK+SK
Sbjct: 61  RYGKYCGLLYSGCPGERPCDGLDACCMKHDDCVQAKNNDYLSQECSQSFLNCMENFKRSK 120

Query: 121 SPSFEGNKCQVDEVIDVISFVMDAALIAGTIFHKP 153
             +F+GNKCQ+DEVIDVIS VM+AALIAG +FHKP
Sbjct: 121 QATFKGNKCQIDEVIDVISLVMEAALIAGKVFHKP 155

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BLAST of Sed0009027 vs. NCBI nr
Match: XP_038878664.1 (phospholipase A2-alpha [Benincasa hispida])

HSP 1 Score: 241.5 bits (615), Expect = 4.7e-60
Identity = 112/142 (78.87%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 11  LLLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLMYSGC 70
           LLLLL     P+RALNIGVQ +D SIT+ K+CSRKCESEFC+VPPLLRYGKYCGL+YSGC
Sbjct: 6   LLLLLFIAFLPSRALNIGVQALDASITMSKDCSRKCESEFCSVPPLLRYGKYCGLLYSGC 65

Query: 71  PGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFEGNKCQVDE 130
           PGERPCDGLDACC KHD CV AKN+DYL+ ECSQSFINCM  FK+SKS  F+GNKC+VDE
Sbjct: 66  PGERPCDGLDACCMKHDACVVAKNDDYLSQECSQSFINCMENFKRSKSAPFKGNKCEVDE 125

Query: 131 VIDVISFVMDAALIAGTIFHKP 153
           VIDVISFVM+AALIAG +FHKP
Sbjct: 126 VIDVISFVMEAALIAGRVFHKP 147

[Close]

BLAST of Sed0009027 vs. NCBI nr
Match: XP_008453533.1 (PREDICTED: phospholipase A2-alpha [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 3.1e-59
Identity = 115/150 (76.67%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 7   LTLALLLLLLCLVS----PTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKY 66
           L L LLLLLL L S    P+ ALNIGVQ +D SIT+ K+CSRKCESEFC+VPPLLRYGKY
Sbjct: 7   LLLLLLLLLLLLPSIAFLPSHALNIGVQALDASITMSKDCSRKCESEFCSVPPLLRYGKY 66

Query: 67  CGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFE 126
           CGL+YSGCPGERPCDGLDACC KHD CV AKN+DYL+ ECSQSF+NCM  FK+S+S  F+
Sbjct: 67  CGLLYSGCPGERPCDGLDACCMKHDACVVAKNDDYLSQECSQSFLNCMENFKRSRSRPFK 126

Query: 127 GNKCQVDEVIDVISFVMDAALIAGTIFHKP 153
           GNKCQVDEVIDVISFVM+AALIAG +FHKP
Sbjct: 127 GNKCQVDEVIDVISFVMEAALIAGKVFHKP 156

[Close]

BLAST of Sed0009027 vs. NCBI nr
Match: TYK28548.1 (phospholipase A2-alpha [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 5.2e-59
Identity = 113/146 (77.40%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 11  LLLLLLCLVS----PTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLM 70
           LLLLLL L S    P+ ALNIGVQ +D SIT+ K+CSRKCESEFC+VPPLLRYGKYCGL+
Sbjct: 6   LLLLLLLLPSIAFLPSHALNIGVQALDASITMSKDCSRKCESEFCSVPPLLRYGKYCGLL 65

Query: 71  YSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFEGNKC 130
           YSGCPGERPCDGLDACC KHD CV AKN+DYL+ ECSQSF+NCM  FK+S+S  F+GNKC
Sbjct: 66  YSGCPGERPCDGLDACCMKHDACVVAKNDDYLSQECSQSFLNCMENFKRSRSRPFKGNKC 125

Query: 131 QVDEVIDVISFVMDAALIAGTIFHKP 153
           QVDEVIDVISFVM+AALIAG +FHKP
Sbjct: 126 QVDEVIDVISFVMEAALIAGKVFHKP 151

[Close]

BLAST of Sed0009027 vs. NCBI nr
Match: XP_022973996.1 (phospholipase A2-alpha [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 0


Query: 1   MTESHSLTLALLLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYG 60
           M   H     LLL L  + +PT ALN+GVQ +D SITL K+CSRKCESEFC+VPPLLRYG
Sbjct: 1   MARFHPFNSFLLLCLAIVSAPTHALNVGVQALDASITLSKDCSRKCESEFCSVPPLLRYG 60

Query: 61  KYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPS 120
           KYCGL+YSGCPGERPCDGLDACC  HD CV AKNNDYL+ ECS+SF+NCM  FK+SKS  
Sbjct: 61  KYCGLLYSGCPGERPCDGLDACCMNHDACVAAKNNDYLSEECSKSFLNCMEKFKRSKSAP 120

Query: 121 FEGNKCQVDEVIDVISFVMDAALIAGTIFHKP 153
           F+GNKC++ EV++VISFVMD AL+AG + HKP
Sbjct: 121 FKGNKCEISEVVEVISFVMDVALLAGRVLHKP 152

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BLAST of Sed0009027 vs. ExPASy Swiss-Prot
Match: Q8S8N6 (Phospholipase A2-alpha OS=Arabidopsis thaliana OX=3702 GN=PLA2-ALPHA PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.6e-56
Identity = 101/144 (70.14%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 9   LALLLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLMYS 68
           + L   LL       ALN+GVQLI PSI+L KECSRKCESEFC+VPP LRYGKYCGL+YS
Sbjct: 5   IILFSFLLFFSVSVSALNVGVQLIHPSISLTKECSRKCESEFCSVPPFLRYGKYCGLLYS 64

Query: 69  GCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFEGNKCQV 128
           GCPGERPCDGLD+CC KHD CV +KNNDYL+ ECSQ FINCM  F + K P+F+GNKC  
Sbjct: 65  GCPGERPCDGLDSCCMKHDACVQSKNNDYLSQECSQKFINCMNNFSQKKQPTFKGNKCDA 124

Query: 129 DEVIDVISFVMDAALIAGTIFHKP 153
           DEVIDVIS VM+AALIAG +  KP
Sbjct: 125 DEVIDVISIVMEAALIAGKVLKKP 148

[Close]

BLAST of Sed0009027 vs. ExPASy Swiss-Prot
Match: Q10E50 (Phospholipase A2 homolog 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2-III PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 78/143 (54.55%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 10  ALLLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLMYSG 69
           A LLL   +  P  ALNIG+Q      +    CSR CES+ C  PPLLRYGKYCG++YSG
Sbjct: 23  AALLLFAVVAPPAAALNIGLQSAGDGASKAGLCSRTCESDHCTTPPLLRYGKYCGILYSG 82

Query: 70  CPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFEGNKCQVD 129
           CPGE+PCD LDACC  HD+CV AK NDYL+  C++  + C+   ++  S +F+GNKC +D
Sbjct: 83  CPGEQPCDELDACCMHHDNCVQAK-NDYLSTACNEELLECLARLREGSS-TFQGNKCMID 142

Query: 130 EVIDVISFVMDAALIAGTIFHKP 153
           EVIDVIS V++AA++AG + HKP
Sbjct: 143 EVIDVISLVIEAAVVAGRLLHKP 163

[Close]

BLAST of Sed0009027 vs. ExPASy Swiss-Prot
Match: Q9XG81 (Probable phospholipase A2 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2-II PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.6e-37
Identity = 72/140 (51.43%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 12  LLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLMYSGCP 71
           +LLLL LV+ +R LNIG  L+  +    + CSR CES+FC + PLLRYGKYCG++YSGCP
Sbjct: 13  VLLLLLLVTASRGLNIG-DLLGSTPAKDQGCSRTCESQFCTIAPLLRYGKYCGILYSGCP 72

Query: 72  GERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFEGNKCQVDEV 131
           GERPCD LDACC  HD CV   N+DYLN  C+++ ++C+    +    +F GNKC V + 
Sbjct: 73  GERPCDALDACCMVHDHCVDTHNDDYLNTMCNENLLSCI---DRVSGATFPGNKCNVGQT 132

Query: 132 IDVISFVMDAALIAGTIFHK 152
             VI  V++ A+ AG I HK
Sbjct: 133 ASVIRGVIETAVFAGKILHK 148

[Close]

BLAST of Sed0009027 vs. ExPASy Swiss-Prot
Match: Q9XG80 (Probable phospholipase A2 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2-I PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 42  CSRKCESEFCAVPPLLRYGKYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVE 101
           CSR C +  C     +RYGKYCG+ +SGC GE PCD LDACC+ HD CV  K    ++V+
Sbjct: 29  CSRSCAALNCDSVG-IRYGKYCGVGWSGCDGEEPCDDLDACCRDHDHCVDKKG--LMSVK 88

Query: 102 CSQSFINCMRFFKKSKSPSFEGNKCQVDEVIDVISFVMDAALI 145
           C + F NCMR  KK+    F   KC  +  +  ++  MD A++
Sbjct: 89  CHEKFKNCMRKVKKAGKIGF-SRKCPYEMAMATMTSGMDMAIM 127

[Close]

BLAST of Sed0009027 vs. ExPASy Swiss-Prot
Match: Q8GZB4 (Phospholipase A2-beta OS=Arabidopsis thaliana OX=3702 GN=PLA2-BETA PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.7e-17
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 36  ITLGKECSRKCESEFCAVPPLLRYGKYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNN 95
           +   +EC+R C ++ C     +RYGKYCG+ +SGCPGE PCD LDACCK HD CV  + N
Sbjct: 25  VARSEECTRTCIAQNCDTLS-IRYGKYCGIGHSGCPGEEPCDDLDACCKIHDHCV--ELN 84

Query: 96  DYLNVECSQSFINCM----RFFKKSKSPSFE-GNKCQVDEVIDVISFVMDAALI 145
              N+ C + F  C+    +  K+SK+       KC    VI  ++  MD  ++
Sbjct: 85  GMTNISCHKKFQRCVNRLSKAIKQSKNKKVGFSTKCPYSVVIPTVNQGMDIGIL 135

[Close]

BLAST of Sed0009027 vs. ExPASy TrEMBL
Match: A0A6J1C0I6 (phospholipase A2-alpha OS=Momordica charantia OX=3673 GN=LOC111007165 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.7e-61
Identity = 116/155 (74.84%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   MTESHSLTLALLLL---LLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLL 60
           M+   +L   LLLL   LLCL  P RALNIGVQ ID SI+L K+CSRKCESEFC+VPP L
Sbjct: 1   MSRFQALLKLLLLLSSSLLCLSVPARALNIGVQAIDASISLSKDCSRKCESEFCSVPPFL 60

Query: 61  RYGKYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSK 120
           RYGKYCGL+YSGCPGERPCDGLDACC KHDDCV AKNNDYL+ ECSQSF+NCM  FK+SK
Sbjct: 61  RYGKYCGLLYSGCPGERPCDGLDACCMKHDDCVQAKNNDYLSQECSQSFLNCMENFKRSK 120

Query: 121 SPSFEGNKCQVDEVIDVISFVMDAALIAGTIFHKP 153
             +F+GNKCQ+DEVIDVIS VM+AALIAG +FHKP
Sbjct: 121 QATFKGNKCQIDEVIDVISLVMEAALIAGKVFHKP 155

[Close]

BLAST of Sed0009027 vs. ExPASy TrEMBL
Match: A0A1S3BWG7 (phospholipase A2-alpha OS=Cucumis melo OX=3656 GN=LOC103494216 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 115/150 (76.67%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 7   LTLALLLLLLCLVS----PTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKY 66
           L L LLLLLL L S    P+ ALNIGVQ +D SIT+ K+CSRKCESEFC+VPPLLRYGKY
Sbjct: 7   LLLLLLLLLLLLPSIAFLPSHALNIGVQALDASITMSKDCSRKCESEFCSVPPLLRYGKY 66

Query: 67  CGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFE 126
           CGL+YSGCPGERPCDGLDACC KHD CV AKN+DYL+ ECSQSF+NCM  FK+S+S  F+
Sbjct: 67  CGLLYSGCPGERPCDGLDACCMKHDACVVAKNDDYLSQECSQSFLNCMENFKRSRSRPFK 126

Query: 127 GNKCQVDEVIDVISFVMDAALIAGTIFHKP 153
           GNKCQVDEVIDVISFVM+AALIAG +FHKP
Sbjct: 127 GNKCQVDEVIDVISFVMEAALIAGKVFHKP 156

[Close]

BLAST of Sed0009027 vs. ExPASy TrEMBL
Match: A0A5D3DYM2 (Phospholipase A2-alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001950 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.5e-59
Identity = 113/146 (77.40%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 11  LLLLLLCLVS----PTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLM 70
           LLLLLL L S    P+ ALNIGVQ +D SIT+ K+CSRKCESEFC+VPPLLRYGKYCGL+
Sbjct: 6   LLLLLLLLPSIAFLPSHALNIGVQALDASITMSKDCSRKCESEFCSVPPLLRYGKYCGLL 65

Query: 71  YSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFEGNKC 130
           YSGCPGERPCDGLDACC KHD CV AKN+DYL+ ECSQSF+NCM  FK+S+S  F+GNKC
Sbjct: 66  YSGCPGERPCDGLDACCMKHDACVVAKNDDYLSQECSQSFLNCMENFKRSRSRPFKGNKC 125

Query: 131 QVDEVIDVISFVMDAALIAGTIFHKP 153
           QVDEVIDVISFVM+AALIAG +FHKP
Sbjct: 126 QVDEVIDVISFVMEAALIAGKVFHKP 151

[Close]

BLAST of Sed0009027 vs. ExPASy TrEMBL
Match: A0A6J1IA72 (phospholipase A2-alpha OS=Cucurbita maxima OX=3661 GN=LOC111472609 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.2e-58
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 0


Query: 1   MTESHSLTLALLLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYG 60
           M   H     LLL L  + +PT ALN+GVQ +D SITL K+CSRKCESEFC+VPPLLRYG
Sbjct: 1   MARFHPFNSFLLLCLAIVSAPTHALNVGVQALDASITLSKDCSRKCESEFCSVPPLLRYG 60

Query: 61  KYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPS 120
           KYCGL+YSGCPGERPCDGLDACC  HD CV AKNNDYL+ ECS+SF+NCM  FK+SKS  
Sbjct: 61  KYCGLLYSGCPGERPCDGLDACCMNHDACVAAKNNDYLSEECSKSFLNCMEKFKRSKSAP 120

Query: 121 FEGNKCQVDEVIDVISFVMDAALIAGTIFHKP 153
           F+GNKC++ EV++VISFVMD AL+AG + HKP
Sbjct: 121 FKGNKCEISEVVEVISFVMDVALLAGRVLHKP 152

[Close]

BLAST of Sed0009027 vs. ExPASy TrEMBL
Match: A0A6J1F1D2 (phospholipase A2-alpha OS=Cucurbita moschata OX=3662 GN=LOC111438456 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.2e-58
Identity = 105/152 (69.08%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MTESHSLTLALLLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYG 60
           M   H     LLL L  + +PT ALN+GVQ +D SITL K+CSRKCESEFC+VPPLLRYG
Sbjct: 1   MARFHPFNSFLLLCLAIVSAPTHALNVGVQALDASITLSKDCSRKCESEFCSVPPLLRYG 60

Query: 61  KYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPS 120
           KYCGL+YSGCPGERPCDGLDACC  HD CV AKNNDYL+ ECS+SF+NCM  FK+SKS  
Sbjct: 61  KYCGLLYSGCPGERPCDGLDACCMNHDACVAAKNNDYLSEECSKSFLNCMEKFKRSKSAP 120

Query: 121 FEGNKCQVDEVIDVISFVMDAALIAGTIFHKP 153
           F+GNKC++ EV++VISFVM+AAL+AG + HKP
Sbjct: 121 FKGNKCEISEVVEVISFVMEAALLAGRVLHKP 152

[Close]

BLAST of Sed0009027 vs. TAIR 10
Match: AT2G06925.1 (Phospholipase A2 family protein )

HSP 1 Score: 218.4 bits (555), Expect = 4.0e-57
Identity = 101/144 (70.14%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 9   LALLLLLLCLVSPTRALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLMYS 68
           + L   LL       ALN+GVQLI PSI+L KECSRKCESEFC+VPP LRYGKYCGL+YS
Sbjct: 5   IILFSFLLFFSVSVSALNVGVQLIHPSISLTKECSRKCESEFCSVPPFLRYGKYCGLLYS 64

Query: 69  GCPGERPCDGLDACCKKHDDCVGAKNNDYLNVECSQSFINCMRFFKKSKSPSFEGNKCQV 128
           GCPGERPCDGLD+CC KHD CV +KNNDYL+ ECSQ FINCM  F + K P+F+GNKC  
Sbjct: 65  GCPGERPCDGLDSCCMKHDACVQSKNNDYLSQECSQKFINCMNNFSQKKQPTFKGNKCDA 124

Query: 129 DEVIDVISFVMDAALIAGTIFHKP 153
           DEVIDVIS VM+AALIAG +  KP
Sbjct: 125 DEVIDVISIVMEAALIAGKVLKKP 148

[Close]

BLAST of Sed0009027 vs. TAIR 10
Match: AT2G19690.1 (phospholipase A2-beta )

HSP 1 Score: 88.6 bits (218), Expect = 4.8e-18
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 36  ITLGKECSRKCESEFCAVPPLLRYGKYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNN 95
           +   +EC+R C ++ C     +RYGKYCG+ +SGCPGE PCD LDACCK HD CV  + N
Sbjct: 25  VARSEECTRTCIAQNCDTLS-IRYGKYCGIGHSGCPGEEPCDDLDACCKIHDHCV--ELN 84

Query: 96  DYLNVECSQSFINCM----RFFKKSKSPSFE-GNKCQVDEVIDVISFVMDAALI 145
              N+ C + F  C+    +  K+SK+       KC    VI  ++  MD  ++
Sbjct: 85  GMTNISCHKKFQRCVNRLSKAIKQSKNKKVGFSTKCPYSVVIPTVNQGMDIGIL 135

[Close]

BLAST of Sed0009027 vs. TAIR 10
Match: AT2G19690.2 (phospholipase A2-beta )

HSP 1 Score: 88.6 bits (218), Expect = 4.8e-18
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 36  ITLGKECSRKCESEFCAVPPLLRYGKYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNN 95
           +   +EC+R C ++ C     +RYGKYCG+ +SGCPGE PCD LDACCK HD CV  + N
Sbjct: 25  VARSEECTRTCIAQNCDTLS-IRYGKYCGIGHSGCPGEEPCDDLDACCKIHDHCV--ELN 84

Query: 96  DYLNVECSQSFINCM----RFFKKSKSPSFE-GNKCQVDEVIDVISFVMDAALI 145
              N+ C + F  C+    +  K+SK+       KC    VI  ++  MD  ++
Sbjct: 85  GMTNISCHKKFQRCVNRLSKAIKQSKNKKVGFSTKCPYSVVIPTVNQGMDIGIL 135

[Close]

BLAST of Sed0009027 vs. TAIR 10
Match: AT4G29460.1 (Phospholipase A2 family protein )

HSP 1 Score: 84.3 bits (207), Expect = 9.0e-17
Identity = 49/122 (40.16%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 40  KECSRKCESEFCAVPPLLRYGKYCGLMYSGCPGERPCDGLDACCKKHDDCVGAKNNDYLN 99
           ++CS  C ++ C     +RYGKYCG+ Y GCPGE PCD LDACC  HD+CV  K   Y+N
Sbjct: 27  EKCSNTCIAQNCNSLG-IRYGKYCGIGYFGCPGEPPCDDLDACCMTHDNCVDLKGMTYVN 86

Query: 100 VECSQSFINCMRFFKKSKSPSFEGNK------CQVDEVIDVISFVMDAALI---AGTIFH 153
             C + F  C+    KS   S  G K      C    VI  +   MD  +     G IF+
Sbjct: 87  --CHKQFKRCVNKLSKSIKHS-NGEKIGFSTQCPYSIVIPTVFNGMDYGIFFSGIGNIFN 144

[Close]

BLAST of Sed0009027 vs. TAIR 10
Match: AT4G29470.1 (Phospholipase A2 family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 24  ALNIGVQLIDPSITLGKECSRKCESEFCAVPPLLRYGKYCGLMYSGCPGERPCDGLDACC 83
           AL + V L+   +   ++CS+ C ++ C V   +RYGKYCG+ Y GCPGE PCD LD CC
Sbjct: 11  ALGLTVFLLLAVVHSQEKCSKTCIAQKCNVLG-IRYGKYCGIGYFGCPGEPPCDDLDDCC 70

Query: 84  KKHDDCVGAKNNDYLNVECSQSFINCMRFFKKS 117
             HD+CV  K   Y  V+C + F  C+   K+S
Sbjct: 71  MTHDNCVDLKGMTY--VDCHKQFQRCVNELKQS 100

The following BLAST results are available for this feature:

BLAST of Sed0009027 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135104.1	5.6e-61	74.84	phospholipase A2-alpha [Momordica charantia]	[more]
XP_038878664.1	4.7e-60	78.87	phospholipase A2-alpha [Benincasa hispida]	[more]
XP_008453533.1	3.1e-59	76.67	PREDICTED: phospholipase A2-alpha [Cucumis melo]	[more]
TYK28548.1	5.2e-59	77.40	phospholipase A2-alpha [Cucumis melo var. makuwa]	[more]
XP_022973996.1	1.3e-57	69.08	phospholipase A2-alpha [Cucurbita maxima]	[more]

BLAST of Sed0009027 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8N6	5.6e-56	70.14	Phospholipase A2-alpha OS=Arabidopsis thaliana OX=3702 GN=PLA2-ALPHA PE=1 SV=1	[more]
Q10E50	2.3e-41	54.55	Phospholipase A2 homolog 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2-III ...	[more]
Q9XG81	7.6e-37	51.43	Probable phospholipase A2 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q9XG80	1.8e-17	43.69	Probable phospholipase A2 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q8GZB4	6.7e-17	39.47	Phospholipase A2-beta OS=Arabidopsis thaliana OX=3702 GN=PLA2-BETA PE=1 SV=1	[more]

BLAST of Sed0009027 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0I6	2.7e-61	74.84	phospholipase A2-alpha OS=Momordica charantia OX=3673 GN=LOC111007165 PE=4 SV=1	[more]
A0A1S3BWG7	1.5e-59	76.67	phospholipase A2-alpha OS=Cucumis melo OX=3656 GN=LOC103494216 PE=4 SV=1	[more]
A0A5D3DYM2	2.5e-59	77.40	Phospholipase A2-alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]
A0A6J1IA72	6.2e-58	69.08	phospholipase A2-alpha OS=Cucurbita maxima OX=3661 GN=LOC111472609 PE=4 SV=1	[more]
A0A6J1F1D2	6.2e-58	69.08	phospholipase A2-alpha OS=Cucurbita moschata OX=3662 GN=LOC111438456 PE=4 SV=1	[more]

BLAST of Sed0009027 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06925.1	4.0e-57	70.14	Phospholipase A2 family protein	[more]
AT2G19690.1	4.8e-18	39.47	phospholipase A2-beta	[more]
AT2G19690.2	4.8e-18	39.47	phospholipase A2-beta	[more]
AT4G29460.1	9.0e-17	40.16	Phospholipase A2 family protein	[more]
AT4G29470.1	1.5e-16	44.09	Phospholipase A2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036444	Phospholipase A2 domain superfamily	GENE3D	1.20.90.10	Phospholipase A2 domain	coord: 23..152 e-value: 5.6E-45 score: 154.2
IPR036444	Phospholipase A2 domain superfamily	SUPERFAMILY	48619	Phospholipase A2, PLA2	coord: 57..151
IPR001211	Phospholipase A2	PANTHER	PTHR11716	PHOSPHOLIPASE A2 FAMILY MEMBER	coord: 10..149
None	No IPR available	PANTHER	PTHR11716:SF87	PHOSPHOLIPASE A2 HOMOLOG 2-RELATED	coord: 10..149
None	No IPR available	CDD	cd04706	PLA2_plant	coord: 36..152 e-value: 1.09586E-58 score: 176.085
IPR033113	Phospholipase A2, histidine active site	PROSITE	PS00118	PA2_HIS	coord: 82..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009027.1	Sed0009027.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050482	arachidonic acid secretion
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0006644	phospholipid metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0047498	calcium-dependent phospholipase A2 activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0005543	phospholipid binding
molecular_function	GO:0004623	phospholipase A2 activity