Sed0008977 (gene) Chayote v1

Overview


Name	Sed0008977
Type	gene
Organism	Sechium edule (Chayote v1)
Description	tetraspanin-19
Location	LG05: 41481060 .. 41484155 (-)
RNA-Seq Expression	Sed0008977
Synteny	Sed0008977

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAGGGCCTGCATGCAATCTTTGTTGAAGTTTGTGAATTCTGGAAATGGAATGGTCGGAATCGCTATGATTTTGTACGGAATTTGGTTGATGAGGGCTTGGCAGAGGCACTCTGGTCATTTTCCCTTTGAAGAATCCAATGACCCTATTCCATGGTATTGCTTTCTGGTTCTTATGCATGCTTATATACTTTGGATTTTGTTTTCCTTCCATTTTCTGGGTTTCTTTTCTAATATTATTTGAAGGGGTGAAGCTGAGTATTGAAATTGAAATGGTTCTCTTGGATCATAACTTCAGCTTGAACAATGTAGAGCATTATGGAAATTATAGATTTGTGATTTCTATATCTCCTGCAGGGTTTTTGTTCCCAAAAACTTTCTGGACAAGAAGTTGATGATTCTTTTGTTTGGGGTTGGGACTTGATCGGTGATGAGACACGATGATCGACATATCTTTTGATATAGTTTACTTTGGACACAAGCCTACATGACTTTTCTTTTGAGGGGTTACTCAAAATGCCATATACCAATGAAGATAACAGTCTCTCATTTATACACGCATGATCTTCCCTTTATCTAGCATGTATGGAACTTTGGGCGCGAACAAAGTACCATTGAGTCTCCTCTCCAATGGTCATTTATCTGTCCTCTTATCAAGTTTACTTTTCTTTAAAGCACATCACCGGTCCATAGAGCTTTACCACATATCTCCACCATGATTATATCTTCAAGACTCCTAACTTCTTTGTTTGACACCCAAGAATTTTACCAACATTGCTTAGTCAGGGCATAGGGCATGACTCTGATACCATTTGTTGGGGACAACATACCTTAACATATCTCTATATTGGTATGAACCTACGTACTAATGACTTTGCTTTTAGTTTTATCCAAACAGCCTCGCACTAATGGAGAACATTATCCCTCACTTACATATCCGTGATTTTTTTCCTTAACTAGCGGATGTTGGGGGGAGACTTTAAAGTTTGAATTTGTCTTATTTCTGTTTGCCCTTAGTAATTTCTCTGTAGATGGGCCTGTGTCTGGGGATAAAAGCCATTCATTACTGGAGAAAGGAGGAATTCATGATACATCTGCTCTTTAGGGAGCATGATCTGAAATAATGTAATTAATAAGTACTAGTAGTAGCATGTATTTGTTTTCCATATTTCCGTCCCAAGAAAAAAAATTCATGATCTTCAAATCTAAAGAGAGTAAATCGCTTTCATTAATCTGGCAAAATGTAGGAATTATCTTCACATTCTTTTCTCTTTCAGCATTTTGATTCTTTGTAGGGTAGCATCTAAACGTCTGGCTTTTCTCTCAATGAAGGGGTGTATTGAAACAAACTCGTAAAGCATATCATAGCAGAACTGAATATGGTTGAGATTCGGGTTTTGTGGCAGTTGGTTAATGGGAGGACAATGGCACTAGGGCTAGGATGTAGCTTACATTTCGGTTTTGCTTAAATTTCAGGTTCATGTGCAGTTTTCTTGGCCTAGGCATTCTGTTATCTGTGATCACATGCTTGGGTCATATTGCTGCTGAAACTGCTAATTGTTGTTGCCTTCATATGGTACTGTATTCTTAAATTGACTAAATGATATGAAATCCCCCTTCCAACATTTTTCTTTTTTACTTTTCTCAATGGATTAGATTACTTGACATATGAATCTGTTTTTCCTTCAATGGATTTGGATGCAGTATATGCTGCTTGTCTTTTTGGTTCTCGTAGTGCAGGCTGGGTTGGCAACTGATGTATTTCTGAACCATGAATGGGAGGAGGTAAAGATTTTACATACTTTAAAACAACTGACTGCTACCAGATATTTATACCTCTAGCTAATAACTTTTAACTTTACACCAGGACTTTCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTAAAACATTTCATTAGATTGAACTTCAAAATCTGCAAGTGGATATGGATCTCAATGATGTCTATTCAGGTCTCTCTCTATTTTTTTGTTGGCCTGTCTTAAGGTAGGATTCCTTCTAACAAACTTGCAATGTTGATGGGCTGCTCAGGGTTTGTCTCTGTTGTTGGCAATGGTACTAAAAGCAAATGGATCACATCGAAATTATGACAGCGAAGATGAGTATGCTCCTGAGAGGCTTCCACTTCTTACGAATGCTCTTCATTCACCGACTACGTGTGTTATTGGAGACCCCGTCTTTCCATCTAAAAATGATGCTTGGAACAAACGAACAGACAACAAGGTATTAATACACAATCATGTTCTTATCTGTGAGGCTTGTCATATATAGCCCTGCATCATTTATCTTGTTCTGTACTGTTTATCACTTATTACCATAAACTTGTTTTCCTTTTGTTGCTTAGAAGCTACAATTAACCAAGCATATCAAATTCTTTCCATTTCCTTTGCAATTAACTGCACTTGCTCCGTACTCAAAAAAAATAAAAATAAAAACTGCACTTGCTCACAATTTATGCTCTGTTATTTTGTCATTAGAACAACTTTTACTGCTGATTTTCATCTTGCCTAAGCTGATAAGAATCATTCATTCATTCATCTTTTAGATGAAATTATAGCTAACTGGCACATTCAAGTTATCGATTTCCACCATTTTCTTATCTCGGACCGAGATGGTGAGCATATTAATCATCCTGTTGATGCCATAAAAGCTACATCTACTAAATTGATCTGATTTCTTTGACCTTTACAGTAAACCTGCAACAGACGCTGCAATACTTGGCATTGAATCCTCCCATTGTACATTAGGTGCATCATTTCCACCACTTGGCTCATTCATTTATGGTATGTACTTGGCATTATATTGATTCATTTTCATCATTTTCCTAAGTCGATCAGAAAACACGGAATTGACATAGATTTCATGCTAGTTAACACGCTGTAAACGAACCTTTCTGTCGATTACAGTGAGCTATTTTGTTTTTGAATACTGTAGATGATGTCAGTATAATTTGGATCTGATCAAGTTTAGAGCTTATCAAAATTTAAACTCAAGTTTTTCTCTTGCAGAAAAATATTCCTGATGGGTTCAGATGGTATCTGTTTTTAAAAATCATTTACGGATATGATTCGTTG

mRNA sequence

ATGTTAAGGGCCTGCATGCAATCTTTGTTGAAGTTTGTGAATTCTGGAAATGGAATGGTCGGAATCGCTATGATTTTGTACGGAATTTGGTTGATGAGGGCTTGGCAGAGGCACTCTGGTCATTTTCCCTTTGAAGAATCCAATGACCCTATTCCATGGTTCATGTGCAGTTTTCTTGGCCTAGGCATTCTGTTATCTGTGATCACATGCTTGGGTCATATTGCTGCTGAAACTGCTAATTGTTGTTGCCTTCATATGTATATGCTGCTTGTCTTTTTGGTTCTCGTAGTGCAGGCTGGGTTGGCAACTGATGTATTTCTGAACCATGAATGGGAGGAGGACTTTCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTAAAACATTTCATTAGATTGAACTTCAAAATCTGCAAGTGGATATGGATCTCAATGATGTCTATTCAGGGTTTGTCTCTGTTGTTGGCAATGGTACTAAAAGCAAATGGATCACATCGAAATTATGACAGCGAAGATGAGTATGCTCCTGAGAGGCTTCCACTTCTTACGAATGCTCTTCATTCACCGACTACGTGTGTTATTGGAGACCCCGTCTTTCCATCTAAAAATGATGCTTGGAACAAACGAACAGACAACAAGTAAACCTGCAACAGACGCTGCAATACTTGGCATTGAATCCTCCCATTGTACATTAGGTGCATCATTTCCACCACTTGGCTCATTCATTTATGAAAAATATTCCTGATGGGTTCAGATGGTATCTGTTTTTAAAAATCATTTACGGATATGATTCGTTG

Coding sequence (CDS)

ATGTTAAGGGCCTGCATGCAATCTTTGTTGAAGTTTGTGAATTCTGGAAATGGAATGGTCGGAATCGCTATGATTTTGTACGGAATTTGGTTGATGAGGGCTTGGCAGAGGCACTCTGGTCATTTTCCCTTTGAAGAATCCAATGACCCTATTCCATGGTTCATGTGCAGTTTTCTTGGCCTAGGCATTCTGTTATCTGTGATCACATGCTTGGGTCATATTGCTGCTGAAACTGCTAATTGTTGTTGCCTTCATATGTATATGCTGCTTGTCTTTTTGGTTCTCGTAGTGCAGGCTGGGTTGGCAACTGATGTATTTCTGAACCATGAATGGGAGGAGGACTTTCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTAAAACATTTCATTAGATTGAACTTCAAAATCTGCAAGTGGATATGGATCTCAATGATGTCTATTCAGGGTTTGTCTCTGTTGTTGGCAATGGTACTAAAAGCAAATGGATCACATCGAAATTATGACAGCGAAGATGAGTATGCTCCTGAGAGGCTTCCACTTCTTACGAATGCTCTTCATTCACCGACTACGTGTGTTATTGGAGACCCCGTCTTTCCATCTAAAAATGATGCTTGGAACAAACGAACAGACAACAAGTAA

Protein sequence

MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLGLGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPSGSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPLLTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK

Homology

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BLAST of Sed0008977 vs. NCBI nr
Match: XP_022970722.1 (tetraspanin-19 [Cucurbita maxima])

HSP 1 Score: 374.4 bits (960), Expect = 6.5e-100
Identity = 176/212 (83.02%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           M+RACMQSLLKFVNSGNG+VGIAMILYGIWLMRAWQRH GHFPFE  +DPIPWFM SF G
Sbjct: 4   MIRACMQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYSFFG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LGILL VITC+GHIAAETA  CCLH+Y++LVF+VL+V+AGLATDVFLN +WEEDFP DPS
Sbjct: 64  LGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPVDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           GSFDQ K FIRLNF IC+WI ISMMSIQGLSLLLAM+LKA GS R YDS+D+YAPERLPL
Sbjct: 124 GSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPERLPL 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSP+TCVIGDPVFPSKNDAWNKRTD++
Sbjct: 184 LKNALHSPSTCVIGDPVFPSKNDAWNKRTDDE 215

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BLAST of Sed0008977 vs. NCBI nr
Match: XP_022947641.1 (tetraspanin-19 [Cucurbita moschata])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 175/212 (82.55%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           M+RAC+QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRH GHFPFE  +DPIPWFM SF G
Sbjct: 4   MIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYSFFG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LGILL VITC+GHIAAETA  CCLH+Y++LVF+VL+V+AGLATDVFLN +WEEDFP DPS
Sbjct: 64  LGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPMDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           GSFDQ K FIRLNF IC+WI ISMMSIQGLSLLLAM+LKA GS R YDS+D+YAPERLPL
Sbjct: 124 GSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPERLPL 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSP+TCVIGDPVFPSKNDAWNKRTD++
Sbjct: 184 LKNALHSPSTCVIGDPVFPSKNDAWNKRTDDE 215

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BLAST of Sed0008977 vs. NCBI nr
Match: KAG6604798.1 (Tetraspanin-19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-99
Identity = 174/212 (82.08%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           M+RAC+QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRH GHFPFE  +DPIPWFM SF G
Sbjct: 4   MIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYSFFG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LG+LL VITC+GHIAAETA  CCLH+Y++LVF+VL+V+AGLATDVFLN +WEEDFP DPS
Sbjct: 64  LGVLLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPMDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           GSFDQ K FIRLNF IC+WI ISMMSIQGLSLLLAM+LKA GS R YDS+D+YAPERLPL
Sbjct: 124 GSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPERLPL 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSP+TCVIGDPVFPSKNDAWNKRTD++
Sbjct: 184 LKNALHSPSTCVIGDPVFPSKNDAWNKRTDDE 215

[Close]

BLAST of Sed0008977 vs. NCBI nr
Match: XP_023534181.1 (tetraspanin-19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.3 bits (952), Expect = 5.5e-99
Identity = 174/212 (82.08%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           M+RAC+QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRH GHFPFE  +DPIPWFM SF G
Sbjct: 4   MIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYSFFG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           +GILL VITC+GHIAAETA  CCLH+Y++LVF+VL+V+AGLATDVFLN +WEEDFP DPS
Sbjct: 64  VGILLCVITCVGHIAAETARGCCLHIYVMLVFVVLMVEAGLATDVFLNRDWEEDFPMDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           GSFDQ K FIRLNF IC+WI ISMMSIQGLSLLLAM+LKA GS R YDS+D+YAPERLPL
Sbjct: 124 GSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPERLPL 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSP+TCVIGDPVFPSKNDAWNKRTD++
Sbjct: 184 LKNALHSPSTCVIGDPVFPSKNDAWNKRTDDE 215

[Close]

BLAST of Sed0008977 vs. NCBI nr
Match: KAA0062078.1 (tetraspanin-19 [Cucumis melo var. makuwa] >TYK04942.1 tetraspanin-19 [Cucumis melo var. makuwa])

HSP 1 Score: 367.5 bits (942), Expect = 7.9e-98
Identity = 172/212 (81.13%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           +LRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRH GH P+E  +DPIPWFM SFLG
Sbjct: 4   ILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYSFLG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LGILL VITCLGHIAAETAN CCLH+YMLL+F+V++V+AG+ TDVFLN +W EDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPKDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           G FDQ KHFI+ NF ICKWI IS +SIQGLSLLLAMVLKA GS R Y+S+DEYAPERLP 
Sbjct: 124 GCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPERLPF 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSPTTCVIGDPVFPSKND WNKRTD++
Sbjct: 184 LKNALHSPTTCVIGDPVFPSKNDTWNKRTDDE 215

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BLAST of Sed0008977 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-64
Identity = 114/210 (54.29%), Postives = 156/210 (74.29%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           ++R+C+QS+LK VNS  GMVGIAMILY +WL+R WQ   G+ PF +S+ P+PWF+ SFLG
Sbjct: 4   IVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYSFLG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LG +L V+TC GHIAAET N CCL++YM  + L+ +V+ G+  D+FLN +W++DFPEDPS
Sbjct: 64  LGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANG--SHRNYDSEDEYAPERL 180
           G+F Q   FI  NFKICKWI +S++ +QGLS+L+AM+LKA G   HR+YDS+DEY    +
Sbjct: 124 GAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTV 183

Query: 181 PLLTNALHSPTTCVIGDPVFPSKNDAWNKR 209
            LL +A   P   V+G+P++ +K  AW  R
Sbjct: 184 ALLQDA-RQPPPYVVGEPMYGAKPGAWTVR 212

[Close]

BLAST of Sed0008977 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.7e-29
Identity = 72/242 (29.75%), Postives = 125/242 (51.65%), Query Frame = 0


Query: 3   RACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGH-FPFEESND------------ 62
           R C++ LLK +N    + G+ MI YGI+L   ++R + +   F+ +N             
Sbjct: 4   RGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPIL 63

Query: 63  -------------PIPWFMCSFLGLGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLV 122
                        P  WF+  F+G+G+ L VI+C G +   + + CCL  Y LL+ L+++
Sbjct: 64  MAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLIL 123

Query: 123 VQAGLATDVFLNHEWEEDFPEDPSGSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAM 182
           V+ G A  +F ++ W ++ P D +G+FD + +F+R N+KI +W+ +  +  + L  LLA+
Sbjct: 124 VELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLAL 183

Query: 183 VLKANGSHRNYDSEDEYAPERLPLLTNALHSPTTCVIGDPVF------PSKNDAWNKRTD 213
           +++A  +   YDS+DEY   R  +    ++     V G PV       PS++D W+ R  
Sbjct: 184 MVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMR 243

[Close]

BLAST of Sed0008977 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 67/207 (32.37%), Postives = 106/207 (51.21%), Query Frame = 0


Query: 8   SLLKFVNSGNGMVGIAMILYGIWLMRAWQRH------------SG--------------- 67
           S LK +N     +G+++I+Y IW++  + RH            SG               
Sbjct: 12  STLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSEPLKNPI 71

Query: 68  ---------------HFPFEESNDPIPWFMCSFLGLGILLSVITCLGHIAAETANCCCLH 127
                           F     + P PWF+ SF+ +GIL+ ++T +G IAAE  N CCL 
Sbjct: 72  DFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCCLC 131

Query: 128 MYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPSGSFDQLKHFIRLNFKICKWIWISMM 173
            Y +L  L+++++A L   + ++  WE+D P DP+G    L+ FI  N  ICKW+ I+++
Sbjct: 132 FYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVV 191

[Close]

BLAST of Sed0008977 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.4e-26
Identity = 66/218 (30.28%), Postives = 104/218 (47.71%), Query Frame = 0


Query: 8   SLLKFVNSGNGMVGIAMILYGIWLMRAWQRH----------------------------- 67
           S+LK +N     +GI++I+Y IW++  +  H                             
Sbjct: 12  SILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFSNSIIEI 71

Query: 68  ------------------------SGHFPFEESNDPIPWFMCSFLGLGILLSVITCLGHI 127
                                      F     + P PWF+  F+ +GIL+ ++T +G I
Sbjct: 72  NSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIVTIIGFI 131

Query: 128 AAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPSGSFDQLKHFIRLNF 173
           AAE  N CCL  Y +L  L+++++A L   + ++  WE+D P DP+G  + L+ FI  N 
Sbjct: 132 AAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENI 191

[Close]

BLAST of Sed0008977 vs. ExPASy TrEMBL
Match: A0A6J1HZX7 (tetraspanin-19 OS=Cucurbita maxima OX=3661 GN=LOC111469621 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.1e-100
Identity = 176/212 (83.02%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           M+RACMQSLLKFVNSGNG+VGIAMILYGIWLMRAWQRH GHFPFE  +DPIPWFM SF G
Sbjct: 4   MIRACMQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYSFFG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LGILL VITC+GHIAAETA  CCLH+Y++LVF+VL+V+AGLATDVFLN +WEEDFP DPS
Sbjct: 64  LGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPVDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           GSFDQ K FIRLNF IC+WI ISMMSIQGLSLLLAM+LKA GS R YDS+D+YAPERLPL
Sbjct: 124 GSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPERLPL 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSP+TCVIGDPVFPSKNDAWNKRTD++
Sbjct: 184 LKNALHSPSTCVIGDPVFPSKNDAWNKRTDDE 215

[Close]

BLAST of Sed0008977 vs. ExPASy TrEMBL
Match: A0A6J1G704 (tetraspanin-19 OS=Cucurbita moschata OX=3662 GN=LOC111451441 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.1e-100
Identity = 175/212 (82.55%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           M+RAC+QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRH GHFPFE  +DPIPWFM SF G
Sbjct: 4   MIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYSFFG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LGILL VITC+GHIAAETA  CCLH+Y++LVF+VL+V+AGLATDVFLN +WEEDFP DPS
Sbjct: 64  LGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPMDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           GSFDQ K FIRLNF IC+WI ISMMSIQGLSLLLAM+LKA GS R YDS+D+YAPERLPL
Sbjct: 124 GSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPERLPL 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSP+TCVIGDPVFPSKNDAWNKRTD++
Sbjct: 184 LKNALHSPSTCVIGDPVFPSKNDAWNKRTDDE 215

[Close]

BLAST of Sed0008977 vs. ExPASy TrEMBL
Match: A0A5D3C188 (Tetraspanin-19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001560 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98
Identity = 172/212 (81.13%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           +LRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRH GH P+E  +DPIPWFM SFLG
Sbjct: 4   ILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYSFLG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LGILL VITCLGHIAAETAN CCLH+YMLL+F+V++V+AG+ TDVFLN +W EDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPKDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           G FDQ KHFI+ NF ICKWI IS +SIQGLSLLLAMVLKA GS R Y+S+DEYAPERLP 
Sbjct: 124 GCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPERLPF 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSPTTCVIGDPVFPSKND WNKRTD++
Sbjct: 184 LKNALHSPTTCVIGDPVFPSKNDTWNKRTDDE 215

[Close]

BLAST of Sed0008977 vs. ExPASy TrEMBL
Match: A0A1S3BK78 (tetraspanin-19 OS=Cucumis melo OX=3656 GN=LOC103490521 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98
Identity = 172/212 (81.13%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           +LRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRH GH P+E  +DPIPWFM SFLG
Sbjct: 4   ILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYSFLG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LGILL VITCLGHIAAETAN CCLH+YMLL+F+V++V+AG+ TDVFLN +W EDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPKDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           G FDQ KHFI+ NF ICKWI IS +SIQGLSLLLAMVLKA GS R Y+S+DEYAPERLP 
Sbjct: 124 GCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPERLPF 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L NALHSPTTCVIGDPVFPSKND WNKRTD++
Sbjct: 184 LKNALHSPTTCVIGDPVFPSKNDTWNKRTDDE 215

[Close]

BLAST of Sed0008977 vs. ExPASy TrEMBL
Match: A0A0A0KEA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128570 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.7e-96
Identity = 168/212 (79.25%), Postives = 187/212 (88.21%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           MLRAC++SLLKFVNSGNGMVGIAMILYGIWLMRAWQRH GH P+E  NDPIPWF  SFLG
Sbjct: 4   MLRACIRSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPNDPIPWFTYSFLG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LGILL VITCLGHIAAETAN CCLH+YMLL+F+V++V+AG+ TDVFLN +W EDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPKDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANGSHRNYDSEDEYAPERLPL 180
           G FDQ KHFI+ NF ICKWI IS +SIQGLSLLLAMVLKA GS R Y+S+DEYAPERLP 
Sbjct: 124 GCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPERLPF 183

Query: 181 LTNALHSPTTCVIGDPVFPSKNDAWNKRTDNK 213
           L N LHSPT CVIGDPVFPSKND WNK+T++K
Sbjct: 184 LKNTLHSPTACVIGDPVFPSKNDTWNKQTEDK 215

[Close]

BLAST of Sed0008977 vs. TAIR 10
Match: AT2G20740.1 (Tetraspanin family protein )

HSP 1 Score: 247.7 bits (631), Expect = 8.5e-66
Identity = 114/210 (54.29%), Postives = 156/210 (74.29%), Query Frame = 0


Query: 1   MLRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGHFPFEESNDPIPWFMCSFLG 60
           ++R+C+QS+LK VNS  GMVGIAMILY +WL+R WQ   G+ PF +S+ P+PWF+ SFLG
Sbjct: 4   IVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYSFLG 63

Query: 61  LGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQAGLATDVFLNHEWEEDFPEDPS 120
           LG +L V+TC GHIAAET N CCL++YM  + L+ +V+ G+  D+FLN +W++DFPEDPS
Sbjct: 64  LGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPS 123

Query: 121 GSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLKANG--SHRNYDSEDEYAPERL 180
           G+F Q   FI  NFKICKWI +S++ +QGLS+L+AM+LKA G   HR+YDS+DEY    +
Sbjct: 124 GAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTV 183

Query: 181 PLLTNALHSPTTCVIGDPVFPSKNDAWNKR 209
            LL +A   P   V+G+P++ +K  AW  R
Sbjct: 184 ALLQDA-RQPPPYVVGEPMYGAKPGAWTVR 212

[Close]

BLAST of Sed0008977 vs. TAIR 10
Match: AT2G20740.2 (Tetraspanin family protein )

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-50
Identity = 90/171 (52.63%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 40  GHFPFEESNDPIPWFMCSFLGLGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLVVQA 99
           G+ PF +S+ P+PWF+ SFLGLG +L V+TC GHIAAET N CCL++YM  + L+ +V+ 
Sbjct: 2   GNLPFADSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEG 61

Query: 100 GLATDVFLNHEWEEDFPEDPSGSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAMVLK 159
           G+  D+FLN +W++DFPEDPSG+F Q   FI  NFKICKWI +S++ +QGLS+L+AM+LK
Sbjct: 62  GVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLK 121

Query: 160 ANG--SHRNYDSEDEYAPERLPLLTNALHSPTTCVIGDPVFPSKNDAWNKR 209
           A G   HR+YDS+DEY    + LL +A   P   V+G+P++ +K  AW  R
Sbjct: 122 ALGPHPHRHYDSDDEYNVSTVALLQDA-RQPPPYVVGEPMYGAKPGAWTVR 171

[Close]

BLAST of Sed0008977 vs. TAIR 10
Match: AT1G32400.1 (tobamovirus multiplication 2A )

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-30
Identity = 72/242 (29.75%), Postives = 125/242 (51.65%), Query Frame = 0


Query: 3   RACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGH-FPFEESND------------ 62
           R C++ LLK +N    + G+ MI YGI+L   ++R + +   F+ +N             
Sbjct: 4   RGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPIL 63

Query: 63  -------------PIPWFMCSFLGLGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLV 122
                        P  WF+  F+G+G+ L VI+C G +   + + CCL  Y LL+ L+++
Sbjct: 64  MAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLIL 123

Query: 123 VQAGLATDVFLNHEWEEDFPEDPSGSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAM 182
           V+ G A  +F ++ W ++ P D +G+FD + +F+R N+KI +W+ +  +  + L  LLA+
Sbjct: 124 VELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLAL 183

Query: 183 VLKANGSHRNYDSEDEYAPERLPLLTNALHSPTTCVIGDPVF------PSKNDAWNKRTD 213
           +++A  +   YDS+DEY   R  +    ++     V G PV       PS++D W+ R  
Sbjct: 184 MVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMR 243

[Close]

BLAST of Sed0008977 vs. TAIR 10
Match: AT1G32400.2 (tobamovirus multiplication 2A )

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-30
Identity = 72/242 (29.75%), Postives = 125/242 (51.65%), Query Frame = 0


Query: 3   RACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGH-FPFEESND------------ 62
           R C++ LLK +N    + G+ MI YGI+L   ++R + +   F+ +N             
Sbjct: 4   RGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPIL 63

Query: 63  -------------PIPWFMCSFLGLGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLV 122
                        P  WF+  F+G+G+ L VI+C G +   + + CCL  Y LL+ L+++
Sbjct: 64  MAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLIL 123

Query: 123 VQAGLATDVFLNHEWEEDFPEDPSGSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAM 182
           V+ G A  +F ++ W ++ P D +G+FD + +F+R N+KI +W+ +  +  + L  LLA+
Sbjct: 124 VELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLAL 183

Query: 183 VLKANGSHRNYDSEDEYAPERLPLLTNALHSPTTCVIGDPVF------PSKNDAWNKRTD 213
           +++A  +   YDS+DEY   R  +    ++     V G PV       PS++D W+ R  
Sbjct: 184 MVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMR 243

[Close]

BLAST of Sed0008977 vs. TAIR 10
Match: AT1G32400.3 (tobamovirus multiplication 2A )

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-30
Identity = 72/242 (29.75%), Postives = 125/242 (51.65%), Query Frame = 0


Query: 3   RACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHSGH-FPFEESND------------ 62
           R C++ LLK +N    + G+ MI YGI+L   ++R + +   F+ +N             
Sbjct: 4   RGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPIL 63

Query: 63  -------------PIPWFMCSFLGLGILLSVITCLGHIAAETANCCCLHMYMLLVFLVLV 122
                        P  WF+  F+G+G+ L VI+C G +   + + CCL  Y LL+ L+++
Sbjct: 64  MAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLIL 123

Query: 123 VQAGLATDVFLNHEWEEDFPEDPSGSFDQLKHFIRLNFKICKWIWISMMSIQGLSLLLAM 182
           V+ G A  +F ++ W ++ P D +G+FD + +F+R N+KI +W+ +  +  + L  LLA+
Sbjct: 124 VELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLAL 183

Query: 183 VLKANGSHRNYDSEDEYAPERLPLLTNALHSPTTCVIGDPVF------PSKNDAWNKRTD 213
           +++A  +   YDS+DEY   R  +    ++     V G PV       PS++D W+ R  
Sbjct: 184 MVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMR 243

The following BLAST results are available for this feature:

BLAST of Sed0008977 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970722.1	6.5e-100	83.02	tetraspanin-19 [Cucurbita maxima]	[more]
XP_022947641.1	1.9e-99	82.55	tetraspanin-19 [Cucurbita moschata]	[more]
KAG6604798.1	2.5e-99	82.08	Tetraspanin-19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023534181.1	5.5e-99	82.08	tetraspanin-19 [Cucurbita pepo subsp. pepo]	[more]
KAA0062078.1	7.9e-98	81.13	tetraspanin-19 [Cucumis melo var. makuwa] >TYK04942.1 tetraspanin-19 [Cucumis me...	[more]

BLAST of Sed0008977 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940P5	1.2e-64	54.29	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]
Q9C5W7	3.7e-29	29.75	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]
Q93XY5	1.7e-26	32.37	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q9SVU4	8.4e-26	30.28	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]

BLAST of Sed0008977 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZX7	3.1e-100	83.02	tetraspanin-19 OS=Cucurbita maxima OX=3661 GN=LOC111469621 PE=4 SV=1	[more]
A0A6J1G704	9.1e-100	82.55	tetraspanin-19 OS=Cucurbita moschata OX=3662 GN=LOC111451441 PE=4 SV=1	[more]
A0A5D3C188	3.8e-98	81.13	Tetraspanin-19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00156...	[more]
A0A1S3BK78	3.8e-98	81.13	tetraspanin-19 OS=Cucumis melo OX=3656 GN=LOC103490521 PE=4 SV=1	[more]
A0A0A0KEA2	4.7e-96	79.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128570 PE=4 SV=1	[more]

BLAST of Sed0008977 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20740.1	8.5e-66	54.29	Tetraspanin family protein	[more]
AT2G20740.2	2.3e-50	52.63	Tetraspanin family protein	[more]
AT1G32400.1	2.6e-30	29.75	tobamovirus multiplication 2A	[more]
AT1G32400.2	2.6e-30	29.75	tobamovirus multiplication 2A	[more]
AT1G32400.3	2.6e-30	29.75	tobamovirus multiplication 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 9..109 e-value: 2.4E-9 score: 37.3
None	No IPR available	PANTHER	PTHR19282:SF158	TETRASPANIN-19	coord: 1..188
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008977.1	Sed0008977.1	mRNA
Sed0008977.2	Sed0008977.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane