Sed0008960 (gene) Chayote v1

Overview


Name	Sed0008960
Type	gene
Organism	Sechium edule (Chayote v1)
Description	root hair specific 4
Location	LG08: 37158401 .. 37159477 (-)
RNA-Seq Expression	Sed0008960
Synteny	Sed0008960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCTGCATTTCCTTCGTCGGAGAACTGCAACAACCACAGATTGATGTCTGCTAAGAACCTGGAGTTCGCCGGTTCAACTTATTTCGCCGATAATGGCGAAAAGGAAAAGCAGATTACAGTGGATCCGATATCGTTGAGAGCGTCATCGGCGAGAGAGGACATGATCGTCGTTCCGGTCATTTCGGCTCCCGATGTCGCCGATCGTCATTTTCCGCCGCCGCCGCTACCACCGTCGCAGTTCAAGTTCTTGACCTATAGTCTTTCTAACTCCGCCAATTCATCTCCCCGATTAGGTCTAATGAAAAAGAGAAGCAAATTTGAAAATCAAGGATCGCACCTCAAATTCTCCAATTCGACGAAGATCAAATCGCCGGTGCAGGATCAGGAAACTCAGATTCGAAGAAGTAAATCGTGTGGCGAAGGGAGAGCCAGCGCTCCGGCGGACGATTTGGATCTGTGGCTGAACAAAGCTAGTTTTCCAGAAACGAATTTCTCCAGGATTGAATCGAATAAGAATGATCGTAATAGTGCGAAGAATTTAGATCATGTAGATGATGGATTTAAATGTGGAGCGTTGTGTTTGTTCTTACCAGGATTCAGCAGAGGGAAGGTGGTTAGGTCAATGAGAAAGGAAGAACAAGAAGAAGAACCAGCGATTGGAAAAGTGAGATTATCGAGAACCGAGATTGGAAGTGTGATATCGAGGACGGTTTCCATGGAGAAATTCGAATGTGGATCATGGGCTTCGTCGGCATTGTCGAATGATCATGGCGAAGACGAATCCAGTAGTAACCTGTTCTTTGATCTGCCAATGGAGTTAATGAGAAATAGTGTTGATGCAAATGCACCTGTTAGTGCAGCTTTCATCTTCGATAAAGATCATAAGGGAGTTCCGAAGAACAACTTGACGAAATTAGTCCAAAAACCAACCGATTCATCTCATCATGTTCGATTTTCGGCATCGGCCTCGTCTCCTTCAACGCCACCGTCCCCAGGTTCCTGCATCACGCCTAGATTGCGCAAGGCGAGAGAGGAGTTCAATGCCTTCCTAGAAGCCCAGAACTCTGCTTAG

mRNA sequence

ATGGCGCCTGCATTTCCTTCGTCGGAGAACTGCAACAACCACAGATTGATGTCTGCTAAGAACCTGGAGTTCGCCGGTTCAACTTATTTCGCCGATAATGGCGAAAAGGAAAAGCAGATTACAGTGGATCCGATATCGTTGAGAGCGTCATCGGCGAGAGAGGACATGATCGTCGTTCCGGTCATTTCGGCTCCCGATGTCGCCGATCGTCATTTTCCGCCGCCGCCGCTACCACCGTCGCAGTTCAAGTTCTTGACCTATAGTCTTTCTAACTCCGCCAATTCATCTCCCCGATTAGGTCTAATGAAAAAGAGAAGCAAATTTGAAAATCAAGGATCGCACCTCAAATTCTCCAATTCGACGAAGATCAAATCGCCGGTGCAGGATCAGGAAACTCAGATTCGAAGAAGTAAATCGTGTGGCGAAGGGAGAGCCAGCGCTCCGGCGGACGATTTGGATCTGTGGCTGAACAAAGCTAGTTTTCCAGAAACGAATTTCTCCAGGATTGAATCGAATAAGAATGATCGTAATAGTGCGAAGAATTTAGATCATGTAGATGATGGATTTAAATGTGGAGCGTTGTGTTTGTTCTTACCAGGATTCAGCAGAGGGAAGGTGGTTAGGTCAATGAGAAAGGAAGAACAAGAAGAAGAACCAGCGATTGGAAAAGTGAGATTATCGAGAACCGAGATTGGAAGTGTGATATCGAGGACGGTTTCCATGGAGAAATTCGAATGTGGATCATGGGCTTCGTCGGCATTGTCGAATGATCATGGCGAAGACGAATCCAGTAGTAACCTGTTCTTTGATCTGCCAATGGAGTTAATGAGAAATAGTGTTGATGCAAATGCACCTGTTAGTGCAGCTTTCATCTTCGATAAAGATCATAAGGGAGTTCCGAAGAACAACTTGACGAAATTAGTCCAAAAACCAACCGATTCATCTCATCATGTTCGATTTTCGGCATCGGCCTCGTCTCCTTCAACGCCACCGTCCCCAGGTTCCTGCATCACGCCTAGATTGCGCAAGGCGAGAGAGGAGTTCAATGCCTTCCTAGAAGCCCAGAACTCTGCTTAG

Coding sequence (CDS)

ATGGCGCCTGCATTTCCTTCGTCGGAGAACTGCAACAACCACAGATTGATGTCTGCTAAGAACCTGGAGTTCGCCGGTTCAACTTATTTCGCCGATAATGGCGAAAAGGAAAAGCAGATTACAGTGGATCCGATATCGTTGAGAGCGTCATCGGCGAGAGAGGACATGATCGTCGTTCCGGTCATTTCGGCTCCCGATGTCGCCGATCGTCATTTTCCGCCGCCGCCGCTACCACCGTCGCAGTTCAAGTTCTTGACCTATAGTCTTTCTAACTCCGCCAATTCATCTCCCCGATTAGGTCTAATGAAAAAGAGAAGCAAATTTGAAAATCAAGGATCGCACCTCAAATTCTCCAATTCGACGAAGATCAAATCGCCGGTGCAGGATCAGGAAACTCAGATTCGAAGAAGTAAATCGTGTGGCGAAGGGAGAGCCAGCGCTCCGGCGGACGATTTGGATCTGTGGCTGAACAAAGCTAGTTTTCCAGAAACGAATTTCTCCAGGATTGAATCGAATAAGAATGATCGTAATAGTGCGAAGAATTTAGATCATGTAGATGATGGATTTAAATGTGGAGCGTTGTGTTTGTTCTTACCAGGATTCAGCAGAGGGAAGGTGGTTAGGTCAATGAGAAAGGAAGAACAAGAAGAAGAACCAGCGATTGGAAAAGTGAGATTATCGAGAACCGAGATTGGAAGTGTGATATCGAGGACGGTTTCCATGGAGAAATTCGAATGTGGATCATGGGCTTCGTCGGCATTGTCGAATGATCATGGCGAAGACGAATCCAGTAGTAACCTGTTCTTTGATCTGCCAATGGAGTTAATGAGAAATAGTGTTGATGCAAATGCACCTGTTAGTGCAGCTTTCATCTTCGATAAAGATCATAAGGGAGTTCCGAAGAACAACTTGACGAAATTAGTCCAAAAACCAACCGATTCATCTCATCATGTTCGATTTTCGGCATCGGCCTCGTCTCCTTCAACGCCACCGTCCCCAGGTTCCTGCATCACGCCTAGATTGCGCAAGGCGAGAGAGGAGTTCAATGCCTTCCTAGAAGCCCAGAACTCTGCTTAG

Protein sequence

MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADNGEKEKQITVDPISLRASSAREDMIVVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKFSNSTKIKSPVQDQETQIRRSKSCGEGRASAPADDLDLWLNKASFPETNFSRIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLSRTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVSAAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREEFNAFLEAQNSA

Homology

[Close]

BLAST of Sed0008960 vs. NCBI nr
Match: XP_023000754.1 (uncharacterized protein LOC111495110 isoform X2 [Cucurbita maxima])

HSP 1 Score: 484.6 bits (1246), Expect = 7.5e-133
Identity = 270/371 (72.78%), Postives = 301/371 (81.13%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADN---GEKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K LEF GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 1   MAPALPTSDNFNNERLMSGK-LEFVGSTYCSDDVECVEKEKQISVDPISLRQSSAREDMI 60

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APDV D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 61  FDP-ITAPDVPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 120

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS +QD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 121 SNSTKLKSSLQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETTSYGDFV 180

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGK+R+S
Sbjct: 181 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKMRIS 240

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ ND GED+SSS+LFFDLPMEL+RNSVDANAP+S
Sbjct: 241 RTEIGSVISRTVSMEKFECGSWASSAMPNDTGEDDSSSSLFFDLPMELIRNSVDANAPIS 300

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KNN +   QK  +SSHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 301 AAFVFDKDQKGVTKNNSS---QKSHESSHHVRF--SASSPSGPSSPASCITPRLRKAREE 360

[Close]

BLAST of Sed0008960 vs. NCBI nr
Match: XP_023000753.1 (uncharacterized protein LOC111495110 isoform X1 [Cucurbita maxima])

HSP 1 Score: 484.6 bits (1246), Expect = 7.5e-133
Identity = 270/371 (72.78%), Postives = 301/371 (81.13%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADN---GEKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K LEF GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 23  MAPALPTSDNFNNERLMSGK-LEFVGSTYCSDDVECVEKEKQISVDPISLRQSSAREDMI 82

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APDV D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 83  FDP-ITAPDVPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 142

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS +QD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 143 SNSTKLKSSLQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETTSYGDFV 202

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGK+R+S
Sbjct: 203 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKMRIS 262

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ ND GED+SSS+LFFDLPMEL+RNSVDANAP+S
Sbjct: 263 RTEIGSVISRTVSMEKFECGSWASSAMPNDTGEDDSSSSLFFDLPMELIRNSVDANAPIS 322

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KNN +   QK  +SSHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 323 AAFVFDKDQKGVTKNNSS---QKSHESSHHVRF--SASSPSGPSSPASCITPRLRKAREE 382

[Close]

BLAST of Sed0008960 vs. NCBI nr
Match: XP_023520328.1 (uncharacterized protein LOC111783644 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.9 bits (1239), Expect = 4.9e-132
Identity = 269/371 (72.51%), Postives = 300/371 (80.86%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADNG---EKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K LEF GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 1   MAPALPTSDNFNNERLMSGK-LEFVGSTYCSDDDECVEKEKQISVDPISLRQSSAREDMI 60

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APDV D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 61  FDP-ITAPDVPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 120

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS VQD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 121 SNSTKLKSSVQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETMSYDDFV 180

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGKVR+S
Sbjct: 181 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKVRMS 240

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ N+ GED+SSS+LF+DLPMEL+RNSVDANAP+S
Sbjct: 241 RTEIGSVISRTVSMEKFECGSWASSAMPNETGEDDSSSSLFYDLPMELIRNSVDANAPIS 300

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KN+ +   QK  + SHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 301 AAFVFDKDQKGVTKNSSS---QKSHEPSHHVRF--SASSPSGPSSPASCITPRLRKAREE 360

[Close]

BLAST of Sed0008960 vs. NCBI nr
Match: XP_022924159.1 (uncharacterized protein LOC111431688 isoform X1 [Cucurbita moschata])

HSP 1 Score: 476.5 bits (1225), Expect = 2.0e-130
Identity = 266/371 (71.70%), Postives = 298/371 (80.32%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADNG---EKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K L F GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 23  MAPALPTSDNFNNERLMSGK-LVFVGSTYCSDDDECVEKEKQISVDPISLRQSSAREDMI 82

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APD  D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 83  FDP-ITAPDAPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 142

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS VQD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 143 SNSTKLKSSVQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETMSYGDFV 202

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGKVR+S
Sbjct: 203 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKVRIS 262

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ N+ GED+SSS+LF+DLPMEL+RNSVDANAP+S
Sbjct: 263 RTEIGSVISRTVSMEKFECGSWASSAMPNETGEDDSSSSLFYDLPMELIRNSVDANAPIS 322

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KN+ +   QK  + SHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 323 AAFVFDKDQKGVTKNSSS---QKSHEPSHHVRF--SASSPSGPSSPASCITPRLRKAREE 382

[Close]

BLAST of Sed0008960 vs. NCBI nr
Match: XP_022924160.1 (uncharacterized protein LOC111431688 isoform X2 [Cucurbita moschata])

HSP 1 Score: 476.5 bits (1225), Expect = 2.0e-130
Identity = 266/371 (71.70%), Postives = 298/371 (80.32%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADNG---EKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K L F GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 1   MAPALPTSDNFNNERLMSGK-LVFVGSTYCSDDDECVEKEKQISVDPISLRQSSAREDMI 60

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APD  D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 61  FDP-ITAPDAPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 120

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS VQD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 121 SNSTKLKSSVQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETMSYGDFV 180

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGKVR+S
Sbjct: 181 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKVRIS 240

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ N+ GED+SSS+LF+DLPMEL+RNSVDANAP+S
Sbjct: 241 RTEIGSVISRTVSMEKFECGSWASSAMPNETGEDDSSSSLFYDLPMELIRNSVDANAPIS 300

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KN+ +   QK  + SHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 301 AAFVFDKDQKGVTKNSSS---QKSHEPSHHVRF--SASSPSGPSSPASCITPRLRKAREE 360

[Close]

BLAST of Sed0008960 vs. ExPASy TrEMBL
Match: A0A6J1KKV0 (uncharacterized protein LOC111495110 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495110 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 3.6e-133
Identity = 270/371 (72.78%), Postives = 301/371 (81.13%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADN---GEKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K LEF GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 1   MAPALPTSDNFNNERLMSGK-LEFVGSTYCSDDVECVEKEKQISVDPISLRQSSAREDMI 60

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APDV D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 61  FDP-ITAPDVPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 120

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS +QD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 121 SNSTKLKSSLQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETTSYGDFV 180

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGK+R+S
Sbjct: 181 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKMRIS 240

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ ND GED+SSS+LFFDLPMEL+RNSVDANAP+S
Sbjct: 241 RTEIGSVISRTVSMEKFECGSWASSAMPNDTGEDDSSSSLFFDLPMELIRNSVDANAPIS 300

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KNN +   QK  +SSHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 301 AAFVFDKDQKGVTKNNSS---QKSHESSHHVRF--SASSPSGPSSPASCITPRLRKAREE 360

[Close]

BLAST of Sed0008960 vs. ExPASy TrEMBL
Match: A0A6J1KNI3 (uncharacterized protein LOC111495110 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495110 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 3.6e-133
Identity = 270/371 (72.78%), Postives = 301/371 (81.13%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADN---GEKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K LEF GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 23  MAPALPTSDNFNNERLMSGK-LEFVGSTYCSDDVECVEKEKQISVDPISLRQSSAREDMI 82

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APDV D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 83  FDP-ITAPDVPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 142

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS +QD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 143 SNSTKLKSSLQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETTSYGDFV 202

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGK+R+S
Sbjct: 203 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKMRIS 262

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ ND GED+SSS+LFFDLPMEL+RNSVDANAP+S
Sbjct: 263 RTEIGSVISRTVSMEKFECGSWASSAMPNDTGEDDSSSSLFFDLPMELIRNSVDANAPIS 322

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KNN +   QK  +SSHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 323 AAFVFDKDQKGVTKNNSS---QKSHESSHHVRF--SASSPSGPSSPASCITPRLRKAREE 382

[Close]

BLAST of Sed0008960 vs. ExPASy TrEMBL
Match: A0A6J1E8C7 (uncharacterized protein LOC111431688 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431688 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 9.9e-131
Identity = 266/371 (71.70%), Postives = 298/371 (80.32%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADNG---EKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K L F GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 23  MAPALPTSDNFNNERLMSGK-LVFVGSTYCSDDDECVEKEKQISVDPISLRQSSAREDMI 82

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APD  D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 83  FDP-ITAPDAPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 142

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS VQD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 143 SNSTKLKSSVQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETMSYGDFV 202

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGKVR+S
Sbjct: 203 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKVRIS 262

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ N+ GED+SSS+LF+DLPMEL+RNSVDANAP+S
Sbjct: 263 RTEIGSVISRTVSMEKFECGSWASSAMPNETGEDDSSSSLFYDLPMELIRNSVDANAPIS 322

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KN+ +   QK  + SHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 323 AAFVFDKDQKGVTKNSSS---QKSHEPSHHVRF--SASSPSGPSSPASCITPRLRKAREE 382

[Close]

BLAST of Sed0008960 vs. ExPASy TrEMBL
Match: A0A6J1EE09 (uncharacterized protein LOC111431688 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431688 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 9.9e-131
Identity = 266/371 (71.70%), Postives = 298/371 (80.32%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADNG---EKEKQITVDPISLRASSAREDMI 60
           MAPA P+S+N NN RLMS K L F GSTY +D+    EKEKQI+VDPISLR SSAREDMI
Sbjct: 1   MAPALPTSDNFNNERLMSGK-LVFVGSTYCSDDDECVEKEKQISVDPISLRQSSAREDMI 60

Query: 61  VVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLKF 120
             P I+APD  D H  PPPLPP+QFKFL+YSL NS NSSPR G MKK+ K ENQ S LK 
Sbjct: 61  FDP-ITAPDAPDLHL-PPPLPPTQFKFLSYSLPNSVNSSPRFGSMKKKGKLENQESKLKI 120

Query: 121 SNSTKIKSPVQD------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----NFS 180
           SNSTK+KS VQD      ++TQ RRSKSCGEGRASAPADDLDL LNKA FPET    +F 
Sbjct: 121 SNSTKLKSSVQDIQVALQEDTQFRRSKSCGEGRASAPADDLDLLLNKAKFPETMSYGDFV 180

Query: 181 RIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLS 240
           R ESNK+ RN A+NL+  DDGFKCGALCLFLPGF + K VRS+RK   EEEP IGKVR+S
Sbjct: 181 RTESNKDYRNGAENLEPTDDGFKCGALCLFLPGFGKAKAVRSIRK---EEEPEIGKVRIS 240

Query: 241 RTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANAPVS 300
           RTEIGSVISRTVSMEKFECGSWASSA+ N+ GED+SSS+LF+DLPMEL+RNSVDANAP+S
Sbjct: 241 RTEIGSVISRTVSMEKFECGSWASSAMPNETGEDDSSSSLFYDLPMELIRNSVDANAPIS 300

Query: 301 AAFIFDKDHKGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREE 359
           AAF+FDKD KGV KN+ +   QK  + SHHVRF  SASSPS P SP SCITPRLRKAREE
Sbjct: 301 AAFVFDKDQKGVTKNSSS---QKSHEPSHHVRF--SASSPSGPSSPASCITPRLRKAREE 360

[Close]

BLAST of Sed0008960 vs. ExPASy TrEMBL
Match: A0A5D3BJI8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005000 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.5e-123
Identity = 261/376 (69.41%), Postives = 295/376 (78.46%), Query Frame = 0


Query: 1   MAPAFPSSENCNNHRLMSAKNLEFAGSTYFADNGE----KEKQITVDPISLRASSAREDM 60
           MAPA P+S+N NN R +S K LEF  STY  DN E    KEKQI+VDPISLR SSARED+
Sbjct: 1   MAPALPTSDNFNNSRSISGK-LEFIVSTYSPDNAECADQKEKQISVDPISLRESSAREDI 60

Query: 61  IVVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSSPRLGLMKKRSKFENQGSHLK 120
           IV P ++APDVAD H  PPPLPP+QFKFL+YSL NSANSSP+   MKK+ KFENQ S LK
Sbjct: 61  IVDP-LTAPDVADLHL-PPPLPPTQFKFLSYSLPNSANSSPK--FMKKKGKFENQASLLK 120

Query: 121 FSNSTKIKSPVQD-------QETQIRRSKSCGEGRASAPADDLDLWLNKASFPET----- 180
            SNSTK+ S VQD       ++TQ RRSKSCGEGRASAPADDLDLWLNKA FPET     
Sbjct: 121 VSNSTKLNSSVQDIQSTTPQEDTQFRRSKSCGEGRASAPADDLDLWLNKAKFPETKSYDD 180

Query: 181 NFSRIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKV 240
            FS+ ESN       KNL+  D+GF CGALCLFLPGF +GK V+SMRKEE+  E  + KV
Sbjct: 181 GFSKTESN-------KNLEAPDEGFNCGALCLFLPGFGKGKSVKSMRKEEETTE--MEKV 240

Query: 241 RLSRTEIGSVISRTVSMEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSVDANA 300
           R+S+TEIGSVISRTVS+EKFECGSWASS L N+ GEDE+ S+LF+DLP+ELMRNSVDANA
Sbjct: 241 RISKTEIGSVISRTVSLEKFECGSWASSVLPNETGEDEAGSSLFYDLPLELMRNSVDANA 300

Query: 301 PVSAAFIFDKDHKGVPKNN-LTKLVQKPTD-SSHHVRFSASASSPSTPPSPGSCITPRLR 359
           PV+AAF+FDKDHKGV KNN  TKLVQK  + SSH  RFSAS+ S S P SP SCITPRLR
Sbjct: 301 PVNAAFVFDKDHKGVMKNNSSTKLVQKSHESSSHRARFSASSPS-SGPSSPASCITPRLR 360

[Close]

BLAST of Sed0008960 vs. TAIR 10
Match: AT4G20190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1); Has 271 Blast hits to 209 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 63; Fungi - 14; Plants - 48; Viruses - 3; Other Eukaryotes - 128 (source: NCBI BLink). )

HSP 1 Score: 174.1 bits (440), Expect = 2.0e-43
Identity = 139/364 (38.19%), Postives = 190/364 (52.20%), Query Frame = 0


Query: 37  EKQITVDPISLRASSAREDMIVVPVISAPDVADRHFPPPPLPPSQFKFLTYSLSNSANSS 96
           E++I+VDP SL + +   DMIV       D+   H         + KF++ SL NSA +S
Sbjct: 43  ERRISVDPQSLLSRNGSFDMIVSRPRDIDDLPLDH-------QMKTKFVSCSLPNSAATS 102

Query: 97  PRLGLMKKRSKFENQGSHLKFSNSTKIKSPVQDQETQIRRSKSCGEGRASAPADDLDLWL 156
           PR       S   N     + +        VQD  T  RRSKSCGEGRA  P+ D D+ L
Sbjct: 103 PR------NSSIHNWKD--RTTEQVLDLMLVQDAATAFRRSKSCGEGRACTPSLDFDMLL 162

Query: 157 NKA-----------SFPETN--------------FSRIESNKNDRN-----SAKNLDHVD 216
           +K+            F  +N              FS+ ESNK++R+     ++K+++  +
Sbjct: 163 HKSRNAHHNQNHHRGFSSSNSKSLSHKSSGNNSFFSKTESNKSNRSNSNTANSKSINSFE 222

Query: 217 DGFKCGALCLFLPGFSRGKVVRSMRKEEQE------EEPAIGKVRLSRTEIGSVISRTVS 276
           DGFKC ALCL+LPGFS+GK VRS RK +           +    R +     +V+S   S
Sbjct: 223 DGFKCSALCLYLPGFSKGKPVRSSRKGDSSFTRTTTMTSSQSMARTASIRDTAVLSARAS 282

Query: 277 MEKFECGSWASSALSNDHGEDESSSNLFFDLPMELMRNSV---DANAPVSAAFIFDKDH- 336
           +E+FECGSW SSA+  D   D      FFDLP EL++      D + PVSAAF+FDK+  
Sbjct: 283 LERFECGSWTSSAMIYDDNADLGGH--FFDLPSELIKGGPGGNDQDDPVSAAFVFDKEPN 342

Query: 337 -----KGVPKNNLTKLVQKPTDSSHHVRFSASASSPSTPPSPGSCITPRLRKAREEFNAF 356
                KGV K + +K  ++  +S  HVRFS S S  S P SP   ITPRL +A E+F++F
Sbjct: 343 LDKEIKGVLKTSGSK-SRRSMESPRHVRFSTS-SPVSYPTSPTHSITPRLLQATEDFSSF 387

[Close]

BLAST of Sed0008960 vs. TAIR 10
Match: AT1G30850.1 (root hair specific 4 )

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-29
Identity = 80/196 (40.82%), Postives = 114/196 (58.16%), Query Frame = 0


Query: 179 AKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEEEPAIGKVRLSRTEIGSVISRT 238
           A+ + + ++ FKC A CL LPGF + K++RS  K +   E    K+  + +  GS +S  
Sbjct: 114 AEKILYKEEDFKCNAFCLSLPGFGKNKLIRSSSKRQNSMEK---KMIRASSFTGSTVSVR 173

Query: 239 VSMEKFECGSWAS-SALSNDHGEDESSSNLFFDLPMELMR-------NSVDANAPVSAAF 298
            S+EKFECGSWAS +AL  D+G       LFFD P+E+ +          D   PV++ F
Sbjct: 174 ASLEKFECGSWASTTALIQDNG------RLFFDFPVEMTKCNSRGGNGGRDVQEPVTSGF 233

Query: 299 IFDKDH-----KGVPKNNLTKLVQKPTDSS--HHVRFSASASSPST--PPSPGSCITPRL 358
           +FD++      + V K   T+  ++  +SS    VRFS S+SS S   P SP +CITPRL
Sbjct: 234 LFDRETETLALRSVLKTRSTRDHRRSAESSPQRRVRFSTSSSSASVSCPTSPRTCITPRL 293

[Close]

BLAST of Sed0008960 vs. TAIR 10
Match: AT5G44660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits to 462 proteins in 141 species: Archae - 2; Bacteria - 370; Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other Eukaryotes - 239 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 9.1e-28
Identity = 130/402 (32.34%), Postives = 179/402 (44.53%), Query Frame = 0


Query: 35  EKEKQITVDPISLRASSARE--------DMIVVPVISAPDVADRHFPPP----------- 94
           + E++I++DP S+R+ S           DM+ +P +S P   D   P P           
Sbjct: 42  QSEREISMDPKSIRSLSMSGSLRRNDSFDMVRLPAMSPPRDLDSPMPLPLQPVQTTGSPK 101

Query: 95  -----------------PLPPSQFKFLTY--------SLSNSANSSP--RLGLMKKRSKF 154
                            P  P Q   L          SL NS   SP  R GLM+     
Sbjct: 102 QRSGLMRALRNREQDSLPNSPKQRSGLMRAFRNKDQDSLPNSTTGSPKQRSGLMRALRNK 161

Query: 155 ENQGSHLKFSNSTK--------IKSPVQDQET-QIRRSKSCGEGRASAPADDLDLWLNKA 214
           E        + S K        +++  QD  +   +RSKSCG       +    L    +
Sbjct: 162 EQDSLPNSTTGSPKQRSGLMRALRNKEQDSSSASYKRSKSCG-------STSKTLSHKSS 221

Query: 215 SFPETNFSRIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKEEQEE-- 274
               + F + +SNK    S  N   ++D FKC ALCLFLPGFS+GK +RS +K++     
Sbjct: 222 GIRNSFFIKTDSNK----SISNNSTLEDRFKCNALCLFLPGFSKGKPIRSSQKDDSSSFT 281

Query: 275 ------EPAIGKVRLSR-------TEIGSVISRTVSMEKFECGSWASSALSNDHGEDESS 334
                   +   + +SR       T   +VIS   SMEKF+CGS+ S +   + G     
Sbjct: 282 RTTTMTRSSSSTITVSRTVSVRESTTTTTVISARASMEKFDCGSYTSESCGEEGG----- 341

Query: 335 SNLFFDLPMELMRNSV---DANAPVSAAFIFDKDH-----KGVPK---NNLTKLVQKPTD 356
            N FFDLP EL+++     D + PVSAAF+FDK+      KGV K   +   K ++ P  
Sbjct: 342 -NHFFDLPSELIKSGSGDNDHDEPVSAAFVFDKEPVEKEIKGVLKVSGSKNRKAMESP-- 401

[Close]

BLAST of Sed0008960 vs. TAIR 10
Match: AT2G34910.1 (BEST Arabidopsis thaliana protein match is: root hair specific 4 (TAIR:AT1G30850.1); Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 81/216 (37.50%), Postives = 113/216 (52.31%), Query Frame = 0


Query: 154 LWLNKASFPETNFSRIESNKNDRNSAKNLDHVDDGFKCGALCLFLPGFSRGKVVRSMRKE 213
           L L K+ +PE NF + E N                FKC A CL LPGF + + VRS + E
Sbjct: 101 LSLRKSRYPEKNFYQEEEN----------------FKCNAFCLSLPGFGK-RPVRSPKSE 160

Query: 214 EQEEEPAIGKVRLSRTEIGSVISRTVSMEKFECGSWAS-SALSNDHGEDESSSNLFFDLP 273
           +  ++  I     S     S +S + S+EKFECGSWAS +AL+ ++G       L+ DLP
Sbjct: 161 DSIKKKMIKASSFS----NSTVSLSASLEKFECGSWASTTALTRENG------RLYIDLP 220

Query: 274 MELMR-NSVDANAPVSAAFIFDKDHKGVPKNNLTKLVQK----------PTDSSHHVRFS 333
           +E+++    D   PVS+ F FDK+   +   ++ K               T     VRFS
Sbjct: 221 VEMIKCGGGDVQEPVSSGFFFDKETGSLALRSVLKKSSSLSGRQLRDLAETSPQRRVRFS 280

Query: 334 ASASSPSTPPSPGSCITPRLRKAREEFNAFLEAQNS 358
            + +S S P SP +CITPRL KAR++FN FL AQN+
Sbjct: 281 -TTTSDSCPASPRTCITPRLLKARDDFNTFLAAQNA 288

The following BLAST results are available for this feature:

BLAST of Sed0008960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000754.1	7.5e-133	72.78	uncharacterized protein LOC111495110 isoform X2 [Cucurbita maxima]	[more]
XP_023000753.1	7.5e-133	72.78	uncharacterized protein LOC111495110 isoform X1 [Cucurbita maxima]	[more]
XP_023520328.1	4.9e-132	72.51	uncharacterized protein LOC111783644 [Cucurbita pepo subsp. pepo]	[more]
XP_022924159.1	2.0e-130	71.70	uncharacterized protein LOC111431688 isoform X1 [Cucurbita moschata]	[more]
XP_022924160.1	2.0e-130	71.70	uncharacterized protein LOC111431688 isoform X2 [Cucurbita moschata]	[more]

BLAST of Sed0008960 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0008960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KKV0	3.6e-133	72.78	uncharacterized protein LOC111495110 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KNI3	3.6e-133	72.78	uncharacterized protein LOC111495110 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E8C7	9.9e-131	71.70	uncharacterized protein LOC111431688 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EE09	9.9e-131	71.70	uncharacterized protein LOC111431688 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3BJI8	1.5e-123	69.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0008960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20190.1	2.0e-43	38.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G30850.1	8.3e-29	40.82	root hair specific 4	[more]
AT5G44660.1	9.1e-28	32.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G34910.1	1.1e-25	37.50	BEST Arabidopsis thaliana protein match is: root hair specific 4 (TAIR:AT1G30850...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..146
None	No IPR available	PANTHER	PTHR33672:SF2	OS07G0499850 PROTEIN	coord: 33..356
IPR040340	Chloroplast enhancing stress tolerance protein	PANTHER	PTHR33672	YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC	coord: 33..356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008960.1	Sed0008960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
biological_process	GO:0080183	response to photooxidative stress
cellular_component	GO:0009535	chloroplast thylakoid membrane