Sed0008853 (gene) Chayote v1

Overview
NameSed0008853
Typegene
OrganismSechium edule (Chayote v1)
Descriptioncysteine-rich receptor-like protein kinase 10
LocationLG01: 10569950 .. 10570129 (-)
RNA-Seq ExpressionSed0008853
SyntenySed0008853
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTATTGTTCTTATGCTTAGTAGTTATTCGGTTCCTTTGTCTTTTCCTAAAGAGCCAACAGCCTTTATGCACAGTAGAGACAATTCCAATGTAATAGAAAGTGATCAGTCTGTAAGTAAGCATTTGATGTTGTCGACTAATGAAATATCTGTCACAGAGTTGCACCCGCGATGA

mRNA sequence

ATGGCATCTATTGTTCTTATGCTTAGTAGTTATTCGGTTCCTTTGTCTTTTCCTAAAGAGCCAACAGCCTTTATGCACAGTAGAGACAATTCCAATGTAATAGAAAGTGATCAGTCTGTAAGTAAGCATTTGATGTTGTCGACTAATGAAATATCTGTCACAGAGTTGCACCCGCGATGA

Coding sequence (CDS)

ATGGCATCTATTGTTCTTATGCTTAGTAGTTATTCGGTTCCTTTGTCTTTTCCTAAAGAGCCAACAGCCTTTATGCACAGTAGAGACAATTCCAATGTAATAGAAAGTGATCAGTCTGTAAGTAAGCATTTGATGTTGTCGACTAATGAAATATCTGTCACAGAGTTGCACCCGCGATGA

Protein sequence

MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELHPR
Homology
[Close]
BLAST of Sed0008853 vs. NCBI nr
Match: XP_023542605.1 (putative receptor-like protein kinase At4g00960 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQS-VSKHLMLSTNEISVTELHPR 60
           MASIVLML+SYSVPL  PKEPT FMH+ DN NVI+SD+S +SK L+LS NE+SVTE HPR
Sbjct: 599 MASIVLMLNSYSVPLPLPKEPTNFMHNIDNGNVIDSDRSMISKFLLLSINEMSVTEFHPR 658

[Close]
BLAST of Sed0008853 vs. NCBI nr
Match: XP_022954645.1 (putative receptor-like protein kinase At4g00960 [Cucurbita moschata])

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQS-VSKHLMLSTNEISVTELHPR 60
           MASIVLML+SYSVPL  PKEPT F+H+ DN NVI+SD+S +SK L+LS NE+SVTE HPR
Sbjct: 611 MASIVLMLNSYSVPLPLPKEPTNFIHNIDNGNVIDSDRSMISKFLLLSINEMSVTEFHPR 670

[Close]
BLAST of Sed0008853 vs. NCBI nr
Match: XP_008446411.2 (PREDICTED: cysteine-rich receptor-like protein kinase 10 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-09
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELH 58
           MASIVLML++YSVPL  P+EPT FMH+ DN+ VI SDQ  +   + STNEIS+TELH
Sbjct: 455 MASIVLMLNTYSVPLPLPEEPTIFMHNTDNAIVINSDQLATNLFISSTNEISITELH 511

[Close]
BLAST of Sed0008853 vs. NCBI nr
Match: XP_022139941.1 (cysteine-rich receptor-like protein kinase 10 [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-08
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELHPR 60
           M SIVLML+SYSV L  P+EP  FM ++D+  +I+SDQS+SK +  S NE S++ELHPR
Sbjct: 610 MTSIVLMLNSYSVTLPLPEEPAFFMRTKDHGIIIDSDQSMSKSIQWSANETSISELHPR 668

[Close]
BLAST of Sed0008853 vs. NCBI nr
Match: XP_038893613.1 (cysteine-rich receptor-like protein kinase 10 [Benincasa hispida])

HSP 1 Score: 68.2 bits (165), Expect = 2.8e-08
Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELHPR 60
           MASIV+ML+S  VPL  P+EPT FMHS DN+ VI SDQ  +   + STNEIS+TEL PR
Sbjct: 423 MASIVVMLNSDWVPLPLPEEPTIFMHSTDNAIVINSDQLATNIFISSTNEISITELQPR 481

[Close]
BLAST of Sed0008853 vs. ExPASy Swiss-Prot
Match: Q8GYA4 (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3)

HSP 1 Score: 43.9 bits (102), Expect = 7.3e-04
Identity = 23/59 (38.98%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELHPR 60
           +++IVLML+S +V L  P++P  F  SR   + +++D + SK L+ S ++ S+T++HPR
Sbjct: 612 LSTIVLMLTSNTVTLPVPRQPGLFFQSRIGKDPLDTD-TTSKSLLGSVDDASITDIHPR 669

[Close]
BLAST of Sed0008853 vs. ExPASy TrEMBL
Match: A0A6J1GSZ6 (putative receptor-like protein kinase At4g00960 OS=Cucurbita moschata OX=3662 GN=LOC111456844 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQS-VSKHLMLSTNEISVTELHPR 60
           MASIVLML+SYSVPL  PKEPT F+H+ DN NVI+SD+S +SK L+LS NE+SVTE HPR
Sbjct: 611 MASIVLMLNSYSVPLPLPKEPTNFIHNIDNGNVIDSDRSMISKFLLLSINEMSVTEFHPR 670

[Close]
BLAST of Sed0008853 vs. ExPASy TrEMBL
Match: A0A1S3BF04 (cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo OX=3656 GN=LOC103489161 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-09
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELH 58
           MASIVLML++YSVPL  P+EPT FMH+ DN+ VI SDQ  +   + STNEIS+TELH
Sbjct: 455 MASIVLMLNTYSVPLPLPEEPTIFMHNTDNAIVINSDQLATNLFISSTNEISITELH 511

[Close]
BLAST of Sed0008853 vs. ExPASy TrEMBL
Match: A0A6J1CE69 (cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=LOC111010730 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-08
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELHPR 60
           M SIVLML+SYSV L  P+EP  FM ++D+  +I+SDQS+SK +  S NE S++ELHPR
Sbjct: 610 MTSIVLMLNSYSVTLPLPEEPAFFMRTKDHGIIIDSDQSMSKSIQWSANETSISELHPR 668

[Close]
BLAST of Sed0008853 vs. ExPASy TrEMBL
Match: A0A5A7UQH5 (Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00560 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-08
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 1    MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELHPR 60
            MASIVLML+SYSV L  PKEP  F+ S+DN N I SD S +K    S NE S++ELHPR
Sbjct: 1213 MASIVLMLNSYSVTLPIPKEPALFVRSKDNGNTIGSDHSSNKSTKCSVNETSLSELHPR 1271

[Close]
BLAST of Sed0008853 vs. ExPASy TrEMBL
Match: A0A5D3BHV8 (Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006080 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-08
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 1    MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELHPR 60
            MASIVLML+SYSV L  PKEP  F+ S+DN N I SD S +K    S NE S++ELHPR
Sbjct: 1245 MASIVLMLNSYSVTLPIPKEPALFVRSKDNGNTIGSDHSSNKSTKCSVNETSLSELHPR 1303

[Close]
BLAST of Sed0008853 vs. TAIR 10
Match: AT4G23180.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 10 )

HSP 1 Score: 43.9 bits (102), Expect = 5.2e-05
Identity = 23/59 (38.98%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MASIVLMLSSYSVPLSFPKEPTAFMHSRDNSNVIESDQSVSKHLMLSTNEISVTELHPR 60
           +++IVLML+S +V L  P++P  F  SR   + +++D + SK L+ S ++ S+T++HPR
Sbjct: 612 LSTIVLMLTSNTVTLPVPRQPGLFFQSRIGKDPLDTD-TTSKSLLGSVDDASITDIHPR 669

The following BLAST results are available for this feature:
BLAST of Sed0008853 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023542605.11.1e-1273.33putative receptor-like protein kinase At4g00960 [Cucurbita pepo subsp. pepo][more]
XP_022954645.13.2e-1271.67putative receptor-like protein kinase At4g00960 [Cucurbita moschata][more]
XP_008446411.22.5e-0964.91PREDICTED: cysteine-rich receptor-like protein kinase 10 [Cucumis melo][more]
XP_022139941.12.1e-0857.63cysteine-rich receptor-like protein kinase 10 [Momordica charantia][more]
XP_038893613.12.8e-0862.71cysteine-rich receptor-like protein kinase 10 [Benincasa hispida][more]
BLAST of Sed0008853 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GYA47.3e-0438.98Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Sed0008853 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GSZ61.5e-1271.67putative receptor-like protein kinase At4g00960 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3BF041.2e-0964.91cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A6J1CE691.0e-0857.63cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=... [more]
A0A5A7UQH51.3e-0861.02Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3BHV81.3e-0861.02Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=119... [more]
BLAST of Sed0008853 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23180.15.2e-0538.98cysteine-rich RLK (RECEPTOR-like protein kinase) 10 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008853.1Sed0008853.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity