Sed0008791 (gene) Chayote v1

Overview


Name	Sed0008791
Type	gene
Organism	Sechium edule (Chayote v1)
Description	double-stranded RNA-binding protein 2
Location	LG03: 12354524 .. 12359546 (-)
RNA-Seq Expression	Sed0008791
Synteny	Sed0008791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTTTTCCCTTTCTCTCTCCCAATCCAGCCTCAGGGCTCTCTCTCTCTCTACTCTCTCTGAAAGTGAAAGAGAAAAACCCCTAAAAACCTTTTGATCTCGCCGGAATTTCATCTCCGTCGCCGCCGACGGCGAAATTCTGTTTCTGTGGCTTACATTTCTGCATCTGGATTACGGCGGATCGCAGATCTGGCCTAGGGTTTTCGGTTTCTGTGAAGAATCCAATCGGAGGAGGTTAATTTGTGAAACTGAGGGGGAATCGGAGCAGAAATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGGAGCTGCTTCAATCTTCCTTCGTATTGCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTCAAAGCTACTGTGAACTTCAATGGCGAGATCTTTGAATGTCCTCAGTACTGCTCTACTCTCCGCCAGGCTGAGCACTCCGCCGCTGAAGTTGCCTTGAACGCTCTCTCTAACCGTGGTCCTCCTCATTCGCTTGCGGCTAGGATCCTGGTGAGTCTTCCTTTTTGTGTTCGGTTGTTTGGTTTCCATTCTCGTGCTCCGCTGCTTGATCTTCGTTTTCTTGCTTGTTTTTTCATGCAACGAATTGATTTTGCTGTTTGTGGTGACTTCGAGTTGAGGAAATTGGTAATTAGGTTTAGGTTTTTGTCATCTTAGTGTTGGTTCAGCATTTTGTTGAAATTTCATGTTATCATTTCCGGTTTGTGCGGAGAAGAAACCTAGATTATCGAGAAATTGCACAATCAGCGATGGTGTGTTCGCACTCAGCTTGAGTACTTCGATCTTTAGGTTGACAAAGATCGATGTGAGACGGTTTTTGTTCTATCTAGGGTTGAAATGATGGATCAGCCATGGATTAGATTAGGGTTTTTCTTCCAAGTTATGAGTCCGAACATGTGATCTTTATGGTCAAATTTGATCGGAAAGTGTGAACTCGTGACTCTTGTTTGAGGGTTGGTTCCATTTGAAGAGGTATCTAGTTTTGTTTACCATATTATCTCGGAGCCAGCTGTGTGGAGTAGTATTCTCGTCAAGTTGGTGTAATTAATTTGGTCATTAATGGGTTTGTCGGTCGTCCAATTGTGTTTTCGGTAGCTCCAACTTTGGCCCATTTTATTTCTCCGATCTCATAAATGATCAGATGGGTATTGTAGAAACGGCAGGGGCCAGAAATCTAGCACCAATTGTGATAAGCTTGTTGGAGGTTGATTTCAGATAGAGATGATCAAGTTTAACCAATTAGAAATTAGGAGGGTGTTGCCATTATCTCTGTTCATAAAAGTCTTGAGGCTTTGAAACTTGGGTTTCAATTATTTTATGCAATAATTTCTCCCCGTGTTTCACTGGAAATTGTTTGACCAACTCTTCTTTGTTGTTTTTAAAAAATTATTTCTCCCCTTTCGCCGTTTGAGTAAATGCCTGCATTTGTCCTTGTCGACTCTTTATTCTGTTCTAAAAACTTCTGTTTGTCTGTGTTTGAAGAGGAAGATGGGAAATTTTCTGTTGATTTGGGGATACTTTTCCTTGATCATTGCCGTGTTCTTATACGCTGAATTCTCTTATGTATCATTTCATTTAATCGATGAAATTGTTTGCATATGGACTTTGAGTTCTATGTCTCGCCTTAGTGATTTCAGTTAAATGATGATTTGTTTGTGATAGTTGCAAAAAATAGCAAATATTTGGTTTTTGTTCGTCACTGAGGTGCACAACCTGGTTAATTGATGATTCTTAGGTTGAGTAATTTATTCCTCATTACCTTGTTATCGTATTGGATGGTCTTTCTTGGCAGGTTAATTGTAATATAATAAGTTCAATTGGTTTGAAGTTATTAACTTTGTTTCAGATTCTCTCGTCCCTTTGTTAATATCTTTTTCAAAAATAAGAGATAAAGATGTCCCTCGTAATTGGAGAATGTATCTGATGTTTCATATAACTATTAGCAGCCATGTTCATAAACTATTTTGCTCCTGTAAACTTCAAATTGTAACTTCGGATTTTAATCCGGAAAGACATGGCCATTAATAGAATAGAGCTCTATTGGCTTAGTGATGGGTGTAGACTCATGAAAATACACTTCCATTTTATGGCGTTACGCTATGTGAAGCAATAGATTAATGATCTAGAATGTAAGAATTGGAGCTTCAATGGCTTATTATTGGAATGTGGTTCCGCAGAAGTAGTTTTGAAAAAAATATGAAATATTTAAACCTTTCAGAATTAAATAGAACTCAGTTTCAAACAGTGGAGATCATTTCAAATCGTATTATGATGCAGATGAGCTTCAGGTGCAGATTGCCTCAAGTCAGATGGATCTGATTCTGCACTGCTCGTCTGCTCCCTTTATTAAAAGTGATCCGAACTTACTGCACCATAGAAATTTATCAAATGGAATCTTCAGTTTTCATTACAATTTTTCTATTTGAAGGTGTTTTTAACGATTAAAAAATATCATAAGTCTAAAATATTTCTAAATTTCAGCAATGTTGAGAATATGAAGACATAAAGAATAATTGATAACCTGACATGTATCGTACCAATAGTTTTTATAATTGAGTAATATTTCCTTGTTGGTTTATTTCTTATACTACATTCCAAAATATAAATTGCATACATGATTTTATAATTGGATTATTAGAAAGGAAGGATTAATTGATGAAATCTACTAATCCTCTTGGGCACAGTATTTGTGAGCTTTTCTCTTTTGATCTTTTCTTCAATCTCTTGAATGTTCTCGACATGAATTAAAGGTACTGCTAGCATAGCATGAACATTTTTACCGACTTTTAGTTTAATAATTTACTATAATCATCTATGAACAGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCCCCGTTGCCACAATATACAACGTTTAGATCAGGCCTTGGCCACCTACCTGTTTTTACAGGGATAGTTGAATTAGCTGGAATAACATTTACTGGAGAACCGGCCAAGAACAAAAAACAGGCAGAGAAGAACGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATGTGAGTGGTTTTTTGAAGGGTTACCTTATCTAACTACTATCCTACAAGATAATGCATGATGCAACCTGTACATGATAATTATATCTGCTGGAACATGGAGATTAGCATTCAAACAGTTCCTCTTCGACATGTTTATGGAAAAGCTCTTTAATATTGAGCCATTATTTTCTATGGAATCTAAATATCCTATGCTTGATGTGCATCTGCCACGCTTTAAAATTAAACACTTTGCATCCAGTTTTTCTGATGCTGAGTCTGATAACATTAAAACATGATTTAAGATTTTGAGTATAGTAAAAGTACATGGAATTGCCTCTAATATAGGTAAATTTCAATTGCGAACACACGTTATAATCCAAAGTTGTTATAGTTTTGTTCTAAGAAAATCATTTACCTTATCATGATGCCTATTTATTTTAAATTCTGGTGTAGAGATCATAACATTTTGTTTTAATTTTGGCTAGTGGCTAAAGAATCAGCAAGCTCGTCATCGGAACCAGAAAACAACGATGAGCTGGAGCAGATCACAATAGCTCGAGCCTTGTTGAATTATCGCCAAAAGGAAAAGATGGCCATGGCAAATCCAAATGCAACTATACCATTCCCCAGAAAACTTCAAATTCATAGTCCAAGGCCAACTAGTCCCCAGCGCCCCCTTGCTCCAACATCTAAAATTCTTCCCTTAATTTGTCCAAAGGCAGCTCCTCGAATCAGAGCGCCATTTTCAGCAAATAAAATCCCCATTTCACAATCCCAATCTCCTGCATTAGAAGGCTCTGGAACAACCCGCCCCCAGAAGTTCAATGCCGGAGCTGCTCTTTCTTATATTCCGGTTCAGCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTGACAATTAGAACGGCAATGCCCGTGTATTCTGCCCCGCCTCTACCGCAACCATCGAAGCTGCCTCCACAGCATGTAATTCGAGTCCCACCCGTACGTATTGCCCCACCCGTTTCTATTAGGCAAGCAATACCTGTTTTTGCTGCTCCCCCAGTACGCAAGGAAAATCCTCCTGTAGTAAAAAAAGAAGATTGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCTCCTGCTTCTACAGCACCCTCATCACCATCGCCGCTGCCTACTATATTGCCTGCTGAAGTAGAACAAGCTACGACAACAGTCGTAAACAGTCAGCAAGAAACTAAGACGTTAGAGAACCTCGAACAACTCAAAATTTGACGAGGTGAATCATTAGAAAAGACCAAATAGGATATTGTCGTATGGTTTTGCAGTAAAGTTAGGTTGTCTCATCTGTCCGCATCTTATTTTGAGTTCTCTTTTCATCTTTTTTGCCTTGTTTTGTTCAAACTTGAGTTGTTGAGAGGTGGAAAAGTTAGTATCAGCAAATGCCATTCATCAGCAACTGTGTCAACTTATGTACTTATATATTAGTATCTTTGGGCATGTTGTCCTATCTTCTCCAAGAATTATATTCTGATTTGCATGCCATCTTTGCATTCCGAGATCGTCTTGATTAGCCCTAGAATGCATCGACATATTAAGGTTGTCACACAGAGTCTCCGGTAACCACCTTGCCCATCGCCCATCGCCCGACACCCTCATTTCTATTCTTGTGCATTCCTATATTCTCATGCACATATGTTTGCTGATCTAGTCTAGATATTGATTCTTAAGATGTTTCATGTTGTGGCTCCCTTTTCAAAAGGAGCGCAAAATGAATGATATTTGTATTTTTCAGGTGGTGAAAATTGAAATGCAGTTTTTTGAGGAGAGATTGTTCATCTTCCACAAATTCATGAGCAATTTTTTAAGGATGAAGACTAAAAGTAGGTTCATTATGTCCATTTGTGCCTTGCAAAATTTAAACTTGGTTGGATTCTGTTCTGTTGAGTGTATGATTGTTCTTTATATTAGCCTGATGTGATTGATTCCTCAA

mRNA sequence

ATTTTTTTTTCCCTTTCTCTCTCCCAATCCAGCCTCAGGGCTCTCTCTCTCTCTACTCTCTCTGAAAGTGAAAGAGAAAAACCCCTAAAAACCTTTTGATCTCGCCGGAATTTCATCTCCGTCGCCGCCGACGGCGAAATTCTGTTTCTGTGGCTTACATTTCTGCATCTGGATTACGGCGGATCGCAGATCTGGCCTAGGGTTTTCGGTTTCTGTGAAGAATCCAATCGGAGGAGGTTAATTTGTGAAACTGAGGGGGAATCGGAGCAGAAATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGGAGCTGCTTCAATCTTCCTTCGTATTGCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTCAAAGCTACTGTGAACTTCAATGGCGAGATCTTTGAATGTCCTCAGTACTGCTCTACTCTCCGCCAGGCTGAGCACTCCGCCGCTGAAGTTGCCTTGAACGCTCTCTCTAACCGTGGTCCTCCTCATTCGCTTGCGGCTAGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCCCCGTTGCCACAATATACAACGTTTAGATCAGGCCTTGGCCACCTACCTGTTTTTACAGGGATAGTTGAATTAGCTGGAATAACATTTACTGGAGAACCGGCCAAGAACAAAAAACAGGCAGAGAAGAACGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATTGGCTAAAGAATCAGCAAGCTCGTCATCGGAACCAGAAAACAACGATGAGCTGGAGCAGATCACAATAGCTCGAGCCTTGTTGAATTATCGCCAAAAGGAAAAGATGGCCATGGCAAATCCAAATGCAACTATACCATTCCCCAGAAAACTTCAAATTCATAGTCCAAGGCCAACTAGTCCCCAGCGCCCCCTTGCTCCAACATCTAAAATTCTTCCCTTAATTTGTCCAAAGGCAGCTCCTCGAATCAGAGCGCCATTTTCAGCAAATAAAATCCCCATTTCACAATCCCAATCTCCTGCATTAGAAGGCTCTGGAACAACCCGCCCCCAGAAGTTCAATGCCGGAGCTGCTCTTTCTTATATTCCGGTTCAGCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTGACAATTAGAACGGCAATGCCCGTGTATTCTGCCCCGCCTCTACCGCAACCATCGAAGCTGCCTCCACAGCATGTAATTCGAGTCCCACCCGTACGTATTGCCCCACCCGTTTCTATTAGGCAAGCAATACCTGTTTTTGCTGCTCCCCCAGTACGCAAGGAAAATCCTCCTGTAGTAAAAAAAGAAGATTGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCTCCTGCTTCTACAGCACCCTCATCACCATCGCCGCTGCCTACTATATTGCCTGCTGAAGTAGAACAAGCTACGACAACAGTCGTAAACAGTCAGCAAGAAACTAAGACGTTAGAGAACCTCGAACAACTCAAAATTTGACGAGGTGAATCATTAGAAAAGACCAAATAGGATATTGTCGTATGGTTTTGCAGTAAAGTTAGGTTGTCTCATCTGTCCGCATCTTATTTTGAGTTCTCTTTTCATCTTTTTTGCCTTGTTTTGTTCAAACTTGAGTTGTTGAGAGGTGGAAAAGTTAGTATCAGCAAATGCCATTCATCAGCAACTGTGTCAACTTATGTACTTATATATTAGTATCTTTGGGCATGTTGTCCTATCTTCTCCAAGAATTATATTCTGATTTGCATGCCATCTTTGCATTCCGAGATCGTCTTGATTAGCCCTAGAATGCATCGACATATTAAGGTTGTCACACAGAGTCTCCGGTAACCACCTTGCCCATCGCCCATCGCCCGACACCCTCATTTCTATTCTTGTGCATTCCTATATTCTCATGCACATATGTTTGCTGATCTAGTCTAGATATTGATTCTTAAGATGTTTCATGTTGTGGCTCCCTTTTCAAAAGGAGCGCAAAATGAATGATATTTGTATTTTTCAGGTGGTGAAAATTGAAATGCAGTTTTTTGAGGAGAGATTGTTCATCTTCCACAAATTCATGAGCAATTTTTTAAGGATGAAGACTAAAAGTAGGTTCATTATGTCCATTTGTGCCTTGCAAAATTTAAACTTGGTTGGATTCTGTTCTGTTGAGTGTATGATTGTTCTTTATATTAGCCTGATGTGATTGATTCCTCAA

Coding sequence (CDS)

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGGAGCTGCTTCAATCTTCCTTCGTATTGCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTCAAAGCTACTGTGAACTTCAATGGCGAGATCTTTGAATGTCCTCAGTACTGCTCTACTCTCCGCCAGGCTGAGCACTCCGCCGCTGAAGTTGCCTTGAACGCTCTCTCTAACCGTGGTCCTCCTCATTCGCTTGCGGCTAGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCCCCGTTGCCACAATATACAACGTTTAGATCAGGCCTTGGCCACCTACCTGTTTTTACAGGGATAGTTGAATTAGCTGGAATAACATTTACTGGAGAACCGGCCAAGAACAAAAAACAGGCAGAGAAGAACGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATTGGCTAAAGAATCAGCAAGCTCGTCATCGGAACCAGAAAACAACGATGAGCTGGAGCAGATCACAATAGCTCGAGCCTTGTTGAATTATCGCCAAAAGGAAAAGATGGCCATGGCAAATCCAAATGCAACTATACCATTCCCCAGAAAACTTCAAATTCATAGTCCAAGGCCAACTAGTCCCCAGCGCCCCCTTGCTCCAACATCTAAAATTCTTCCCTTAATTTGTCCAAAGGCAGCTCCTCGAATCAGAGCGCCATTTTCAGCAAATAAAATCCCCATTTCACAATCCCAATCTCCTGCATTAGAAGGCTCTGGAACAACCCGCCCCCAGAAGTTCAATGCCGGAGCTGCTCTTTCTTATATTCCGGTTCAGCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTGACAATTAGAACGGCAATGCCCGTGTATTCTGCCCCGCCTCTACCGCAACCATCGAAGCTGCCTCCACAGCATGTAATTCGAGTCCCACCCGTACGTATTGCCCCACCCGTTTCTATTAGGCAAGCAATACCTGTTTTTGCTGCTCCCCCAGTACGCAAGGAAAATCCTCCTGTAGTAAAAAAAGAAGATTGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCTCCTGCTTCTACAGCACCCTCATCACCATCGCCGCTGCCTACTATATTGCCTGCTGAAGTAGAACAAGCTACGACAACAGTCGTAAACAGTCAGCAAGAAACTAAGACGTTAGAGAACCTCGAACAACTCAAAATTTGA

Protein sequence

MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSAAEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIARALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRAPFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPVYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAPAAPKEDPPASTAPSSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI

Homology

[Close]

BLAST of Sed0008791 vs. NCBI nr
Match: XP_008462570.1 (PREDICTED: double-stranded RNA-binding protein 2 [Cucumis melo] >KAA0041703.1 double-stranded RNA-binding protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 718.0 bits (1852), Expect = 4.7e-203
Identity = 378/413 (91.53%), Postives = 392/413 (94.92%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEK+AM+NPNATIPF +KLQI +PRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
           PFSANKIPISQSQ+P LEGSG  RPQKF+AG ALSYIPVQQFRTSCHGIAPPVTIRTAMP
Sbjct: 241 PFSANKIPISQSQTPVLEGSG-PRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300

Query: 301 VYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAP 360
           V+SAPPLPQPSKLPPQ VIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPPVVKKE+CPAP
Sbjct: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPASTAP-SSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           AAPKEDPPA +AP + PSP   +  AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 412

[Close]

BLAST of Sed0008791 vs. NCBI nr
Match: XP_038894734.1 (double-stranded RNA-binding protein 2 [Benincasa hispida])

HSP 1 Score: 717.6 bits (1851), Expect = 6.1e-203
Identity = 382/430 (88.84%), Postives = 395/430 (91.86%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEK+AM+NPNATIPF +KLQI +PRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
           PFSANKIPI QSQ+P LEGSG TR QKF+AGAALSYIPVQQFRTSCHGIAPPVTIRTAMP
Sbjct: 241 PFSANKIPIPQSQTPTLEGSG-TRAQKFSAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300

Query: 301 VYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAP 360
           VYSAPPLPQPSKLPPQ VIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKE+CPAP
Sbjct: 301 VYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAP 360

Query: 361 AAPKEDP---------PASTAPSSPSP---------LPTILPAEVEQATTTVVNSQQETK 413
           AAPK+DP         P + +P  PSP         LPT+ P EVE+AT+TVVNSQQETK
Sbjct: 361 AAPKDDPTALSASVPSPTTVSPPVPSPSTVSPPVPSLPTVSPPEVEEATSTVVNSQQETK 420

[Close]

BLAST of Sed0008791 vs. NCBI nr
Match: XP_004139447.1 (double-stranded RNA-binding protein 2 [Cucumis sativus] >KGN64845.1 hypothetical protein Csa_022785 [Cucumis sativus])

HSP 1 Score: 716.8 bits (1849), Expect = 1.0e-202
Identity = 378/415 (91.08%), Postives = 392/415 (94.46%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEK+AM+NPNATIPF +KLQI +PRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
           PFSANKIPI QSQ+PALEGSG  RPQKF+AG ALSYIPVQQFRTSCHGIAPPVTIRTAMP
Sbjct: 241 PFSANKIPIPQSQTPALEGSG-PRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300

Query: 301 VYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAP 360
           V+SAPPLPQPSKLPPQ VIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPPVVKKE+CPAP
Sbjct: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPASTAP---SSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           AAPKEDPPA +AP   + PSP   +  AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 414

[Close]

BLAST of Sed0008791 vs. NCBI nr
Match: XP_022152917.1 (double-stranded RNA-binding protein 2-like [Momordica charantia])

HSP 1 Score: 710.7 bits (1833), Expect = 7.4e-201
Identity = 378/412 (91.75%), Postives = 385/412 (93.45%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEKMAM+NPNATIPFP+KLQI SPRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
           PFS NKI I QSQ+PALEGSG TRPQKF+AGAALSYIPV QFRTSCHGIAPPVTIRT MP
Sbjct: 241 PFSTNKISIPQSQTPALEGSG-TRPQKFSAGAALSYIPVPQFRTSCHGIAPPVTIRTTMP 300

Query: 301 VYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAP 360
           VYSAPPLPQPSKLPPQ VIRVPPVRIAPPVSIRQA+PVFAAPPVRKENPPVV+KED   P
Sbjct: 301 VYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPPVRKENPPVVRKED--FP 360

Query: 361 AAPKEDPPASTAPSSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           AAPKEDPP   APS     PT  PAEVEQATT V NSQQE+KTLENLEQLKI
Sbjct: 361 AAPKEDPPVIPAPSP----PTTSPAEVEQATTAVANSQQESKTLENLEQLKI 405

[Close]

BLAST of Sed0008791 vs. NCBI nr
Match: KAG6583583.1 (Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019284.1 Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 704.1 bits (1816), Expect = 7.0e-199
Identity = 374/413 (90.56%), Postives = 384/413 (92.98%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEKMAM+NPNATIPFP+KLQI SPRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAG-AALSYIPVQQFRTSCHGIAPPVTIRTAM 300
           PFSANKIPI  +Q+ ALEGS T RPQKF+AG AALSYIPV Q+RTSCHGIAPPVTIRT M
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPA 360
           PVYSAPPLPQP KLPPQ VIRVPPVRIAPPVSIRQAIPVFAAPPVRKEN P VKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKEDPPASTAPSSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           PAAPKE+  A      PSP PT  PAEVEQ TTT+VNSQQETKTLENLE+LKI
Sbjct: 361 PAAPKENVAAPAPVPVPSP-PTESPAEVEQDTTTLVNSQQETKTLENLEELKI 412

[Close]

BLAST of Sed0008791 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-125
Identity = 264/414 (63.77%), Postives = 302/414 (72.95%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWS+LKQLAKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-ANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIR 240
           AL+NYR KE +   ++ +A +PF +K  + + RPTSPQ   A TS+ILP ICPK   R  
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAM 300
               A    I +  + ALE     RPQ+  A     Y+P++QFR+ CHG+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVYSAPPLPQP-----SKLP-----PQHVIRVPPVRIAPPVSIRQAIPVFA-APPVR--- 360
           PV+SAPP+P P     ++LP     P  +   PPVRIAPPV+IR A+PVFA APPVR   
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIRT 360

Query: 361 KENPPVVKKEDCPAPAAPKEDPPASTAPSSPSPLPTILPAEVEQATTTVVNSQQ 400
              P V   E   +    KE  P          LP  L   VE +T T+ + ++
Sbjct: 361 AVKPTVEAGETRISSVQEKESIPV---------LPDSLEIGVEGSTITITDCEK 403

[Close]

BLAST of Sed0008791 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 9.7e-111
Identity = 226/359 (62.95%), Postives = 264/359 (73.54%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLP+Y C+REGPDHAPRFKA VNFNGE FE P + +TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL AL+ RGP +SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAGITFTG+PAKNKKQAEKNAA AAWS+L+QL ++ ASSS+EPE+NDE EQI IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTS-PQRPLAPTSKILPLICPKAAPRIR 240
           ALLNYR KEKMAMAN     PFP+K  +   R T+ PQ   +  SKILPL  PK+  R R
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 -----APFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVT 300
                A  +A++ P   ++SP           +F A  A  Y+PV  FR  CH +APPVT
Sbjct: 241 PESPAASDAASQTPFRPTESP-------NPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVT 300

Query: 301 IRTAMPVYSAPPLPQP----SKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENP 350
           +RT++PV+SAPPLP P     +LPP  +   PP+R+A PV IR A P+F    V+   P
Sbjct: 301 VRTSIPVFSAPPLPPPGARTQQLPPL-MSHPPPIRMASPVRIRPAPPLFTPSAVQGPKP 351

[Close]

BLAST of Sed0008791 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.6e-71
Identity = 148/227 (65.20%), Postives = 167/227 (73.57%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGE FE P +CSTLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN LS RGP  SLAA++LDETG+YKNLLQE A R G  LP YTT RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAK--ESASSSSEPE-NNDELEQIT 180
             VELAG+TFTG P K KKQA+KNAAMAAWS LKQL +  E +SSS  P+ ++D+ EQI 
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTS 225
           +AR L +  Q             P  ++ Q  S RP+S +RP  P S
Sbjct: 181 VARTLASLNQTN-------GGKTPQQKEKQQSSNRPSS-RRPSYPKS 219

[Close]

BLAST of Sed0008791 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.0e-64
Identity = 166/352 (47.16%), Postives = 213/352 (60.51%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY C REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPK-AAPRIR 240
            L  +R KE +    PN +    R+  I + R    Q     T+    L+C K  +  + 
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 APFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTA- 300
              +++  P  Q   P+   +  T+ Q              + + S     P + I+T+ 
Sbjct: 241 TNEASSSSPPPQRFWPS--RTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSS 300

Query: 301 -MPVYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENP 350
             P+ S+      SKL P     +   ++AP V IR  IPV +APP  K NP
Sbjct: 301 PSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP-PKPNP 335

[Close]

BLAST of Sed0008791 vs. ExPASy Swiss-Prot
Match: Q8GY79 (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.3e-64
Identity = 166/369 (44.99%), Postives = 206/369 (55.83%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWS+LK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KMAMANPNATIPFPRKLQIHSPRPTSPQRPLAP---- 240
            L  ++ KE                  +N +  I   R + + + + +S      P    
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 TSKILPLICPKAAPRIRAPFSANKIPISQ--SQSPALEGSGTTRPQKFNAGAALSYIPVQ 300
            S  + LI P   P+     S+  +P  Q      + E    T  +  N+ A ++     
Sbjct: 241 NSSFISLIPPPPPPK-----SSKILPFIQQYKDRSSQEAKTETATEMINSKAKVN----- 300

Query: 301 QFRTSCHGIAPPVTIRTAMPVYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFA 350
                           T+  +    P    ++        V P  +AP V +R  IPVFA
Sbjct: 301 ---------------ETSTRLSKQMPFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFA 336

[Close]

BLAST of Sed0008791 vs. ExPASy TrEMBL
Match: A0A5A7TEV1 (Double-stranded RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00360 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 2.3e-203
Identity = 378/413 (91.53%), Postives = 392/413 (94.92%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEK+AM+NPNATIPF +KLQI +PRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
           PFSANKIPISQSQ+P LEGSG  RPQKF+AG ALSYIPVQQFRTSCHGIAPPVTIRTAMP
Sbjct: 241 PFSANKIPISQSQTPVLEGSG-PRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300

Query: 301 VYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAP 360
           V+SAPPLPQPSKLPPQ VIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPPVVKKE+CPAP
Sbjct: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPASTAP-SSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           AAPKEDPPA +AP + PSP   +  AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 412

[Close]

BLAST of Sed0008791 vs. ExPASy TrEMBL
Match: A0A1S3CHR7 (double-stranded RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103500895 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 2.3e-203
Identity = 378/413 (91.53%), Postives = 392/413 (94.92%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEK+AM+NPNATIPF +KLQI +PRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
           PFSANKIPISQSQ+P LEGSG  RPQKF+AG ALSYIPVQQFRTSCHGIAPPVTIRTAMP
Sbjct: 241 PFSANKIPISQSQTPVLEGSG-PRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300

Query: 301 VYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAP 360
           V+SAPPLPQPSKLPPQ VIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPPVVKKE+CPAP
Sbjct: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPASTAP-SSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           AAPKEDPPA +AP + PSP   +  AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 412

[Close]

BLAST of Sed0008791 vs. ExPASy TrEMBL
Match: A0A0A0LSF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 5.0e-203
Identity = 378/415 (91.08%), Postives = 392/415 (94.46%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEK+AM+NPNATIPF +KLQI +PRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
           PFSANKIPI QSQ+PALEGSG  RPQKF+AG ALSYIPVQQFRTSCHGIAPPVTIRTAMP
Sbjct: 241 PFSANKIPIPQSQTPALEGSG-PRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300

Query: 301 VYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAP 360
           V+SAPPLPQPSKLPPQ VIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPPVVKKE+CPAP
Sbjct: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPASTAP---SSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           AAPKEDPPA +AP   + PSP   +  AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 414

[Close]

BLAST of Sed0008791 vs. ExPASy TrEMBL
Match: A0A6J1DHJ7 (double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111020530 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 3.6e-201
Identity = 378/412 (91.75%), Postives = 385/412 (93.45%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEKMAM+NPNATIPFP+KLQI SPRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
           PFS NKI I QSQ+PALEGSG TRPQKF+AGAALSYIPV QFRTSCHGIAPPVTIRT MP
Sbjct: 241 PFSTNKISIPQSQTPALEGSG-TRPQKFSAGAALSYIPVPQFRTSCHGIAPPVTIRTTMP 300

Query: 301 VYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPAP 360
           VYSAPPLPQPSKLPPQ VIRVPPVRIAPPVSIRQA+PVFAAPPVRKENPPVV+KED   P
Sbjct: 301 VYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPPVRKENPPVVRKED--FP 360

Query: 361 AAPKEDPPASTAPSSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           AAPKEDPP   APS     PT  PAEVEQATT V NSQQE+KTLENLEQLKI
Sbjct: 361 AAPKEDPPVIPAPSP----PTTSPAEVEQATTAVANSQQESKTLENLEQLKI 405

[Close]

BLAST of Sed0008791 vs. ExPASy TrEMBL
Match: A0A6J1I2I8 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469315 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.4e-197
Identity = 373/413 (90.31%), Postives = 386/413 (93.46%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIRA 240
           ALLNYRQKEKMAM+NPNATIPFP+KLQI SPRPTSPQRP APTSKILPLIC KAAPR RA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPISQSQSPALEGSGTTRPQKFNAG-AALSYIPVQQFRTSCHGIAPPVTIRTAM 300
           PFSANKIPI  +Q+ ALEGS T RPQKF+AG AALSYIPV Q+RTSCHGIAPPVTIRT M
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEDCPA 360
           PVYSAPPLPQP KLPPQ VIRVPPVRIAPPVSIRQAIPVFAAPPVRKEN P VKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKEDPPASTAPSSPSPLPTILPAEVEQATTTVVNSQQETKTLENLEQLKI 413
           P APKE+  A+ AP  P+P PT  PAEVEQ TTT+VNS+QETKTLENLE+LKI
Sbjct: 361 PTAPKEN-LAAPAP-VPTP-PTESPAEVEQDTTTLVNSRQETKTLENLEELKI 410

[Close]

BLAST of Sed0008791 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 451.4 bits (1160), Expect = 7.6e-127
Identity = 264/414 (63.77%), Postives = 302/414 (72.95%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWS+LKQLAKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-ANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPKAAPRIR 240
           AL+NYR KE +   ++ +A +PF +K  + + RPTSPQ   A TS+ILP ICPK   R  
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTAM 300
               A    I +  + ALE     RPQ+  A     Y+P++QFR+ CHG+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVYSAPPLPQP-----SKLP-----PQHVIRVPPVRIAPPVSIRQAIPVFA-APPVR--- 360
           PV+SAPP+P P     ++LP     P  +   PPVRIAPPV+IR A+PVFA APPVR   
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIRT 360

Query: 361 KENPPVVKKEDCPAPAAPKEDPPASTAPSSPSPLPTILPAEVEQATTTVVNSQQ 400
              P V   E   +    KE  P          LP  L   VE +T T+ + ++
Sbjct: 361 AVKPTVEAGETRISSVQEKESIPV---------LPDSLEIGVEGSTITITDCEK 403

[Close]

BLAST of Sed0008791 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 248.8 bits (634), Expect = 7.4e-66
Identity = 166/352 (47.16%), Postives = 213/352 (60.51%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY C REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPK-AAPRIR 240
            L  +R KE +    PN +    R+  I + R    Q     T+    L+C K  +  + 
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 APFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTA- 300
              +++  P  Q   P+   +  T+ Q              + + S     P + I+T+ 
Sbjct: 241 TNEASSSSPPPQRFWPS--RTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSS 300

Query: 301 -MPVYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENP 350
             P+ S+      SKL P     +   ++AP V IR  IPV +APP  K NP
Sbjct: 301 PSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP-PKPNP 335

[Close]

BLAST of Sed0008791 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 248.8 bits (634), Expect = 7.4e-66
Identity = 166/352 (47.16%), Postives = 213/352 (60.51%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY C REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMANPNATIPFPRKLQIHSPRPTSPQRPLAPTSKILPLICPK-AAPRIR 240
            L  +R KE +    PN +    R+  I + R    Q     T+    L+C K  +  + 
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 APFSANKIPISQSQSPALEGSGTTRPQKFNAGAALSYIPVQQFRTSCHGIAPPVTIRTA- 300
              +++  P  Q   P+   +  T+ Q              + + S     P + I+T+ 
Sbjct: 241 TNEASSSSPPPQRFWPS--RTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSS 300

Query: 301 -MPVYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENP 350
             P+ S+      SKL P     +   ++AP V IR  IPV +APP  K NP
Sbjct: 301 PSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP-PKPNP 335

[Close]

BLAST of Sed0008791 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 247.7 bits (631), Expect = 1.7e-65
Identity = 166/369 (44.99%), Postives = 206/369 (55.83%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWS+LK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KMAMANPNATIPFPRKLQIHSPRPTSPQRPLAP---- 240
            L  ++ KE                  +N +  I   R + + + + +S      P    
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 TSKILPLICPKAAPRIRAPFSANKIPISQ--SQSPALEGSGTTRPQKFNAGAALSYIPVQ 300
            S  + LI P   P+     S+  +P  Q      + E    T  +  N+ A ++     
Sbjct: 241 NSSFISLIPPPPPPK-----SSKILPFIQQYKDRSSQEAKTETATEMINSKAKVN----- 300

Query: 301 QFRTSCHGIAPPVTIRTAMPVYSAPPLPQPSKLPPQHVIRVPPVRIAPPVSIRQAIPVFA 350
                           T+  +    P    ++        V P  +AP V +R  IPVFA
Sbjct: 301 ---------------ETSTRLSKQMPFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFA 336

[Close]

BLAST of Sed0008791 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 126.7 bits (317), Expect = 4.3e-29
Identity = 73/172 (42.44%), Postives = 96/172 (55.81%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYCCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           +YK QLQ  A +    LP Y   REGP HAPRF+  V F G+ F+  ++  TL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           A++A+ +L+ + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDE 173
             VE AG  F+GE AK KK AE +AA  A+ ++K        S + P    E
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQE 167

The following BLAST results are available for this feature:

BLAST of Sed0008791 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462570.1	4.7e-203	91.53	PREDICTED: double-stranded RNA-binding protein 2 [Cucumis melo] >KAA0041703.1 do...	[more]
XP_038894734.1	6.1e-203	88.84	double-stranded RNA-binding protein 2 [Benincasa hispida]	[more]
XP_004139447.1	1.0e-202	91.08	double-stranded RNA-binding protein 2 [Cucumis sativus] >KGN64845.1 hypothetical...	[more]
XP_022152917.1	7.4e-201	91.75	double-stranded RNA-binding protein 2-like [Momordica charantia]	[more]
KAG6583583.1	7.0e-199	90.56	Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of Sed0008791 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN2	1.1e-125	63.77	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]
Q9AV50	9.7e-111	62.95	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DKP4	2.6e-71	65.20	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9LJF5	1.0e-64	47.16	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]
Q8GY79	2.3e-64	44.99	Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE...	[more]

BLAST of Sed0008791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TEV1	2.3e-203	91.53	Double-stranded RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CHR7	2.3e-203	91.53	double-stranded RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103500895 PE...	[more]
A0A0A0LSF2	5.0e-203	91.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1	[more]
A0A6J1DHJ7	3.6e-201	91.75	double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1I2I8	2.4e-197	90.31	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Sed0008791 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28380.1	7.6e-127	63.77	dsRNA-binding protein 2	[more]
AT3G26932.1	7.4e-66	47.16	dsRNA-binding protein 3	[more]
AT3G26932.2	7.4e-66	47.16	dsRNA-binding protein 3	[more]
AT5G41070.1	1.7e-65	44.99	dsRNA-binding protein 5	[more]
AT3G62800.1	4.3e-29	42.44	double-stranded-RNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 2..69 e-value: 3.1E-20 score: 83.2 coord: 88..154 e-value: 2.8E-19 score: 80.1
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 2..68 e-value: 7.9E-16 score: 58.5 coord: 88..152 e-value: 1.5E-11 score: 44.9
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 11.38275
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 87..155 score: 10.994328
None	No IPR available	GENE3D	3.30.160.20		coord: 81..155 e-value: 2.2E-20 score: 74.7
None	No IPR available	GENE3D	3.30.160.20		coord: 1..68 e-value: 5.0E-22 score: 80.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..380
None	No IPR available	PANTHER	PTHR46031:SF7	DOUBLE-STRANDED RNA-BINDING PROTEIN 2-LIKE	coord: 1..407
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 1..407
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 88..159
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..69
IPR044451	AtDRB-like, second double-stranded RNA binding domain, plant	CDD	cd19908	DSRM_AtDRB-like_rpt2	coord: 86..154 e-value: 3.78283E-38 score: 130.292
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 1..69 e-value: 1.23932E-41 score: 139.533

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008791.1	Sed0008791.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0070919	production of siRNA involved in gene silencing by small RNA
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003725	double-stranded RNA binding