Sed0008637 (gene) Chayote v1

Overview


Name	Sed0008637
Type	gene
Organism	Sechium edule (Chayote v1)
Description	B-like cyclin
Location	LG10: 36608449 .. 36611824 (+)
RNA-Seq Expression	Sed0008637
Synteny	Sed0008637

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAGACAATCTAGAAACCCATTTTTGTAGAACAAAAAAAAAAACAACTCAACCCTTCTCTCTTTCTCTCTATCTTTCACCTCCATCACAAAGAAAAACCATCACCAAAAAAGAAAATGGGCCAAATGGGGTTTCTCTTCTCTTCCAAATAATGACTCCAAAAACCCCAATCTTCTTCAAACAAGCAAATGGCTTTACACCCAAATGAACAACAACGACAACAAGAAACAGAGCATCCCATTTCCAACAAAAATGGCAGCACCCCATTTGTAGAAGATGAAGAACTTGCCTCTTTATTATCCAAAGAACAAGATCAAAATCTCCAAAATGCCACCCTCCTCATGGCTAGCTTTGAAAAAGACAGTGCTCTGTTTTTGGCTAGAACAGAGGCCATAGAATGGTTGCTTAAAGTTCACTCCTTTCATGGCTTCTCCTCTGTCACAGCCCTCTTAGCCATTAATTACCTTGACAGAATCCTCATTAGCCCTAATTTTCAAAGAAACAAGCCATGGATGCTTCAACTCCTTGCTGTAACTTGCATTTCCTTAGCTGCTAAAGTGGAAGAAGTTCATGTCCCCCTTCTTCTTGACCTCCAGGTACCGAAAAAAAAAAATTCAAATCTTTCTCTTTTTTTTTCACAAACCCATTATTAGAAACCAGTTTTTAAAGGTACCCTTTTGGTCAATTTGCAGGTGGAGGATTGCAAGTACATTTTTGAAGCGAAAACGATTCAAAGAATGGAGCTTTTGGTGCTGAGTGTTCTTCAATGGAAGATGAATCCAGTGACCTGTGTTTCATTTCTTGCCATTTTTAACACAAAAGGCATTTTTGGGTTTAAGAATCAAAGCTTTTTAAAGGAGTTTTTTTGGCGTTGTGAGCAGATTCTTCTCTCTCTTGTTTCTGGTATATTCCATGAATCCGCCATTTTTGTTCCTTAAAGAAAACTTTTTTTTTTTGTTATAAAGTTGGGTTTTTTTTTAACAGATTGCAGATCGGTGAGGTTTGTTCCTTCTGTGATGGCTGTATCGGCAATGGTGATGGTCGTTGAAGAGATGGGAGATTGTAACTGTAATCTATTGGATTTTCAGGATCGGCTTCTTAATGCCTTCAAAATAACCAAGGTTTTTATTTTTCTCTTTCTTTTTCTCATCTTCAAGAAAAAAAAAAGAAAGAAATTAGTTTTGTACTAAAATATTGAATCCATGGGGTGTTTATTAAGGAGTTTTAAACATACTAGAGTCACTTTTCAAAATTTTTGATTTTTCTAATTCTCAAAATAAAATAATTTCTCATTTGGAAGCATTCATTATATAATTTTTCTTTTAGAATCTCTATTCAAACAAGTTTTTTTTTTTTTTTTAATGTAATTCTTTTACCAAAATCTTCATCTAAATCAGTTATTATCTTTAATTTTTTAAAACAAATTTCTTTTAAAATTAATTATCCCACGCATCTTAATTTTTAATCATTTAAAATAATTATTTATTTTAATTACTCACTCTAATTACTTTTACAAATTTTCGTCCAAAGAGAATAGATAATCTATTTCATCTCTAAGCAATAATTTAATTTCCAAAATTGGTATTTGACTTTCTTTAAATTTATGGTCTCTTCCCCCAAATCTCAAAAAAAAAAAAAAAATGCACCTAGCCTTTCTTTTTCAAATTGAGGTTATGATTTTGTCTTTTTGTTAAATTAGAAGCAATAAATGATTACCTAGGGTAGAAAATAATTAATGGGAAGATATTTAGAATAATCAAAATATGGACAGTTTAAGTAGTCAAATTAAAATGTTTCATGTGATTTTCAAAATAAAGATACACATGATTGGTAAACTTATATTTCACTCTTTTTTTTTAAAAAAAACAAACTTATATTTCACTTTTGACCAAAAATCCACCTCCAAAATGCAAATACAATCATCAAAAGTTGTAGGATTTTAGAGGGGATGATTTTTTTTTTCTTTTTTAAAAAAAAAAAATTAAAAGAGGGGTATAAGTTAAGTCTATTATAAAAAGATTTTTATCTCAATTTTGTTTACAACCTTTTTCAATATTATTTTCTTTCTTTCGATTCTTATTTTAATCAAATGCATATTCTGGTGAAACTTTAAAAAAGTAATTATTTTGGTTTTGAATTTTTTTAAAATGTATTTTTGTCCATGAGCTTTTAAAAAGTAATGGTTTTGTTTTTTTCCTGCTATTTTCTTTTGTTCATTTAATATTTAATCATAACCAACCAATGTAGTTTTTTTGTACACCTTTTTCTATATTCCAACATTTGAAAATATTGTCATTACTTTTTTTTAAACAACCTTTGTGATTACTATGTTATACTTATGTTATTAAAGTTAAGTTGTTGACTTTTTCATTATCTTCACATTGAAGAAATCAAATTTATTGTATCCATTTACTAAAAGCAAGATAAATTATAAAAACCAAAACAATTACTTTTTAAGAAATAAACAATACAATCATTTAAGAACTGAGAAATTTATTCACAAAATATATATTTCTTTTATTTTTGTTTAAAATTATTATAATAATGGGAGGTAGGGAAACTCAAATTCGTGATTTCATGGTTAATATATATACACTAATGACACTAAGTTACTCTTCTTATTCGCCACAAAATATATATTTCAGACGCCACAAAACTAAAAATAGAAATAATGTTGAAACTAACGATCATAAATGTACCTCCAAAAATCTTTGTTCCTAAATCCAAAAATTTCAAATTCACAATCAATATCACACCTTGGATAATTCAACAGTATCCAATCTTTTTCCCACCCTTTCTCTCCTTTTAAAACATCCACTAAACTCAAAAGCTTAAGTTGAAAATCTAACGACAACGTCTCGACGTTCGCAGGAGAGAGTGAAGGAATGTCGCAACGTGATAGCGGAGATAGCAAAAAGACAAACGAAACCGAACCGATCGGGGAAGAAGAGGAAGCAACATGTGATGGAGGAGGAAGAAGAAATATCAAGAACATCATCAGAATCAGAATCAGAAATAGGGAGCCCAAATGGAGTAATAGAAGCCAATTTCAGCTGTGAAAGCTCCAACGATTCGTGGAGTGTAGGGACAACAGTGCATCTGTCTGCAGCAGATCAAACATCTTGTTCTTCCAAAAGAACCAAATCCACTCATTGAACAAACCTCAAAAAATCATTATTATGTGCTTATGTTTATGTTTTTATTATATATATATAAATGGCACTTTAGTAATGACAAAATGAGATTCCAAAAAAAAAAAAATCTTTATTATGGTTTGTATATTGAAATTATTGTCAGTGTTATTTTGCATTATCTTTTCTGACTATACTCCATTTGAACATATTATCCCTTTCTTATGTTATTGAAAATGGG

mRNA sequence

AAAAAAAAGACAATCTAGAAACCCATTTTTGTAGAACAAAAAAAAAAACAACTCAACCCTTCTCTCTTTCTCTCTATCTTTCACCTCCATCACAAAGAAAAACCATCACCAAAAAAGAAAATGGGCCAAATGGGGTTTCTCTTCTCTTCCAAATAATGACTCCAAAAACCCCAATCTTCTTCAAACAAGCAAATGGCTTTACACCCAAATGAACAACAACGACAACAAGAAACAGAGCATCCCATTTCCAACAAAAATGGCAGCACCCCATTTGTAGAAGATGAAGAACTTGCCTCTTTATTATCCAAAGAACAAGATCAAAATCTCCAAAATGCCACCCTCCTCATGGCTAGCTTTGAAAAAGACAGTGCTCTGTTTTTGGCTAGAACAGAGGCCATAGAATGGTTGCTTAAAGTTCACTCCTTTCATGGCTTCTCCTCTGTCACAGCCCTCTTAGCCATTAATTACCTTGACAGAATCCTCATTAGCCCTAATTTTCAAAGAAACAAGCCATGGATGCTTCAACTCCTTGCTGTAACTTGCATTTCCTTAGCTGCTAAAGTGGAAGAAGTTCATGTCCCCCTTCTTCTTGACCTCCAGGTGGAGGATTGCAAGTACATTTTTGAAGCGAAAACGATTCAAAGAATGGAGCTTTTGGTGCTGAGTGTTCTTCAATGGAAGATGAATCCAGTGACCTGTGTTTCATTTCTTGCCATTTTTAACACAAAAGGCATTTTTGGGTTTAAGAATCAAAGCTTTTTAAAGGAGTTTTTTTGGCGTTGTGAGCAGATTCTTCTCTCTCTTGTTTCTGATTGCAGATCGGTGAGGTTTGTTCCTTCTGTGATGGCTGTATCGGCAATGGTGATGGTCGTTGAAGAGATGGGAGATTGTAACTGTAATCTATTGGATTTTCAGGATCGGCTTCTTAATGCCTTCAAAATAACCAAGGAGAGAGTGAAGGAATGTCGCAACGTGATAGCGGAGATAGCAAAAAGACAAACGAAACCGAACCGATCGGGGAAGAAGAGGAAGCAACATGTGATGGAGGAGGAAGAAGAAATATCAAGAACATCATCAGAATCAGAATCAGAAATAGGGAGCCCAAATGGAGTAATAGAAGCCAATTTCAGCTGTGAAAGCTCCAACGATTCGTGGAGTGTAGGGACAACAGTGCATCTGTCTGCAGCAGATCAAACATCTTGTTCTTCCAAAAGAACCAAATCCACTCATTGAACAAACCTCAAAAAATCATTATTATGTGCTTATGTTTATGTTTTTATTATATATATATAAATGGCACTTTAGTAATGACAAAATGAGATTCCAAAAAAAAAAAAATCTTTATTATGGTTTGTATATTGAAATTATTGTCAGTGTTATTTTGCATTATCTTTTCTGACTATACTCCATTTGAACATATTATCCCTTTCTTATGTTATTGAAAATGGG

Coding sequence (CDS)

ATGGCTTTACACCCAAATGAACAACAACGACAACAAGAAACAGAGCATCCCATTTCCAACAAAAATGGCAGCACCCCATTTGTAGAAGATGAAGAACTTGCCTCTTTATTATCCAAAGAACAAGATCAAAATCTCCAAAATGCCACCCTCCTCATGGCTAGCTTTGAAAAAGACAGTGCTCTGTTTTTGGCTAGAACAGAGGCCATAGAATGGTTGCTTAAAGTTCACTCCTTTCATGGCTTCTCCTCTGTCACAGCCCTCTTAGCCATTAATTACCTTGACAGAATCCTCATTAGCCCTAATTTTCAAAGAAACAAGCCATGGATGCTTCAACTCCTTGCTGTAACTTGCATTTCCTTAGCTGCTAAAGTGGAAGAAGTTCATGTCCCCCTTCTTCTTGACCTCCAGGTGGAGGATTGCAAGTACATTTTTGAAGCGAAAACGATTCAAAGAATGGAGCTTTTGGTGCTGAGTGTTCTTCAATGGAAGATGAATCCAGTGACCTGTGTTTCATTTCTTGCCATTTTTAACACAAAAGGCATTTTTGGGTTTAAGAATCAAAGCTTTTTAAAGGAGTTTTTTTGGCGTTGTGAGCAGATTCTTCTCTCTCTTGTTTCTGATTGCAGATCGGTGAGGTTTGTTCCTTCTGTGATGGCTGTATCGGCAATGGTGATGGTCGTTGAAGAGATGGGAGATTGTAACTGTAATCTATTGGATTTTCAGGATCGGCTTCTTAATGCCTTCAAAATAACCAAGGAGAGAGTGAAGGAATGTCGCAACGTGATAGCGGAGATAGCAAAAAGACAAACGAAACCGAACCGATCGGGGAAGAAGAGGAAGCAACATGTGATGGAGGAGGAAGAAGAAATATCAAGAACATCATCAGAATCAGAATCAGAAATAGGGAGCCCAAATGGAGTAATAGAAGCCAATTTCAGCTGTGAAAGCTCCAACGATTCGTGGAGTGTAGGGACAACAGTGCATCTGTCTGCAGCAGATCAAACATCTTGTTCTTCCAAAAGAACCAAATCCACTCATTGA

Protein sequence

MALHPNEQQRQQETEHPISNKNGSTPFVEDEELASLLSKEQDQNLQNATLLMASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEEEEEISRTSSESESEIGSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCSSKRTKSTH

Homology

[Close]

BLAST of Sed0008637 vs. NCBI nr
Match: XP_022988812.1 (cyclin-D3-1-like [Cucurbita maxima])

HSP 1 Score: 407.1 bits (1045), Expect = 1.5e-109
Identity = 241/365 (66.03%), Postives = 273/365 (74.79%), Query Frame = 0


Query: 4   HPNEQQRQQETEHPISNKNGSTPFV---------EDEELASLLSKEQDQNLQNATLLMAS 63
           H  +QQ+  +TE PI   NG T ++         EDEEL SLL+KE+DQNLQN  +L   
Sbjct: 27  HQQQQQQHLQTEDPIFRDNGGTHYLEQTTHFVTFEDEELGSLLAKERDQNLQNGDVLERL 86

Query: 64  FEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLA 123
            E+D+AL LARTEA+EWLLKV++F+GFSSVTALLAINYLDRIL  P+FQRNKPWMLQLLA
Sbjct: 87  IERDAALSLARTEAVEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRNKPWMLQLLA 146

Query: 124 VTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLA 183
           VTCISLAAKVEE+ VPLLLDLQVED K+IFE KTIQRMELLVLS L+WKM+PVT VSFL 
Sbjct: 147 VTCISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLG 206

Query: 184 IFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCN 243
           I   +   G KNQ   +E F RCE+ILLSLVSD RSV F+PSVMAVSAMV VVEEMGDCN
Sbjct: 207 IVTKR--LGLKNQCIERELFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCN 266

Query: 244 --CNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEE------ 303
             CN LDFQDRLLNA KITKER K+C NVI E+ KR+TK NRSGKKRKQ+  +E      
Sbjct: 267 CYCNPLDFQDRLLNALKITKERSKKCCNVIREVTKRETKANRSGKKRKQNEEDEAEEEED 326

Query: 304 --EEEISRTSSE----SESEIGSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCSSK 346
             +EE SRTS E    SESE GSPNGV+E NFSCESSNDSW +             C SK
Sbjct: 327 DDDEERSRTSLETETGSESEGGSPNGVMEGNFSCESSNDSWGMEEVT-------GCCCSK 382

[Close]

BLAST of Sed0008637 vs. NCBI nr
Match: KAG6588684.1 (Cyclin-D3-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405.6 bits (1041), Expect = 4.3e-109
Identity = 240/364 (65.93%), Postives = 274/364 (75.27%), Query Frame = 0


Query: 6   NEQQRQQETEHPISNKNGSTPFV---------EDEELASLLSKEQDQNLQNATLLMASFE 65
           + QQ+  +TE PI + NG T F+         EDEEL SLL+KE+DQNLQN  +L    E
Sbjct: 28  HHQQQHLQTEDPIFHDNGGTHFLEQTTHFVAFEDEELGSLLAKERDQNLQNGDVLERLIE 87

Query: 66  KDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLAVT 125
           +D+AL LARTEAIEWLLKV++F+GFSSVTALLAINYLDRIL  P+FQR+KPWMLQLLAVT
Sbjct: 88  RDAALSLARTEAIEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRDKPWMLQLLAVT 147

Query: 126 CISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLAIF 185
           CISLAAKVEE+ VPLLLDLQVED K+IFE KTIQRMELLVLS L+WKM+PVT VSFL I 
Sbjct: 148 CISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLGIV 207

Query: 186 NTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCN-- 245
             +   G KNQ   +EFF RCE+ILLSLVSD RSV F+PSVMAVSAMV VVEEMGDCN  
Sbjct: 208 TKR--LGLKNQCIEREFFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCNCY 267

Query: 246 CNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEE-------- 305
           CN LDFQDRLLNA KITKER K+C NVI E+ KR+TK NRSGKKRKQ+  +E        
Sbjct: 268 CNPLDFQDRLLNALKITKERSKKCCNVIREVTKRETKANRSGKKRKQNEEDEAEEEDDND 327

Query: 306 EEEISRTSSESESEI-----GSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCSSKR 346
           +EE SRTS E+E+E      GSPNGV+E NFSCESSNDSW +             C SKR
Sbjct: 328 DEERSRTSLETETESESEGGGSPNGVMEGNFSCESSNDSWGIEEVT-------GCCCSKR 382

[Close]

BLAST of Sed0008637 vs. NCBI nr
Match: KAG7022470.1 (Cyclin-D3-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.6 bits (1041), Expect = 4.3e-109
Identity = 240/364 (65.93%), Postives = 274/364 (75.27%), Query Frame = 0


Query: 6   NEQQRQQETEHPISNKNGSTPFV---------EDEELASLLSKEQDQNLQNATLLMASFE 65
           + QQ+  +TE PI + NG T F+         EDEEL SLL+KE+DQNLQN  +L    E
Sbjct: 28  HHQQQHLQTEDPIFHDNGGTHFLEQTTHFVAFEDEELGSLLAKERDQNLQNGDVLERLIE 87

Query: 66  KDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLAVT 125
           +D+AL LARTEAIEWLLKV++F+GFSSVTALLAINYLDRIL  P+FQR+KPWMLQLLAVT
Sbjct: 88  RDAALSLARTEAIEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRDKPWMLQLLAVT 147

Query: 126 CISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLAIF 185
           CISLAAKVEE+ VPLLLDLQVED K+IFE KTIQRMELLVLS L+WKM+PVT VSFL I 
Sbjct: 148 CISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLGIV 207

Query: 186 NTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCN-- 245
             +   G KNQ   +EFF RCE+ILLSLVSD RSV F+PSVMAVSAMV VVEEMGDCN  
Sbjct: 208 TKR--LGLKNQCIEREFFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCNCY 267

Query: 246 CNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEE-------- 305
           CN LDFQDRLLNA KITKER K+C NVI E+ KR+TK NRSGKKRKQ+  +E        
Sbjct: 268 CNPLDFQDRLLNALKITKERSKKCCNVIREVTKRETKANRSGKKRKQNEEDEGEEEDDND 327

Query: 306 EEEISRTSSESESEI-----GSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCSSKR 346
           +EE SRTS E+E+E      GSPNGV+E NFSCESSNDSW +             C SKR
Sbjct: 328 DEERSRTSLETETESESEGGGSPNGVMEGNFSCESSNDSWGIEEVT-------GCCCSKR 382

[Close]

BLAST of Sed0008637 vs. NCBI nr
Match: XP_022927751.1 (cyclin-D3-1-like [Cucurbita moschata])

HSP 1 Score: 404.4 bits (1038), Expect = 9.6e-109
Identity = 239/363 (65.84%), Postives = 274/363 (75.48%), Query Frame = 0


Query: 6   NEQQRQQETEHPISNKNGSTPFV---------EDEELASLLSKEQDQNLQNATLLMASFE 65
           ++QQ+  +TE PI + NG T F+         EDEEL SLL+KE+DQNLQN  +L    E
Sbjct: 28  HQQQQHLQTEDPIFHDNGGTHFLEQTTHFVAFEDEELGSLLAKERDQNLQNGDVLERLIE 87

Query: 66  KDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLAVT 125
           +D+AL LARTEAIEWLLKV++F+GFSSVTALLAINYLDRIL  P+FQR+KPWMLQLLAVT
Sbjct: 88  RDAALSLARTEAIEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRDKPWMLQLLAVT 147

Query: 126 CISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLAIF 185
           CISLAAKVEE+ VPLLLDLQVED K+IFE KTIQRMELLVLS L+WKM+PVT VSFL I 
Sbjct: 148 CISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLGIV 207

Query: 186 NTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCN-- 245
             +   G KNQ   +EFF RCE+ILLSLVSD RSV F+PSVMAVSAMV VVEEMGDCN  
Sbjct: 208 TKR--LGLKNQCIEREFFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCNCY 267

Query: 246 CNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEE-------E 305
           CN LDFQDRLLNA KITKER K+C NVI E+ KR+TK NRSGKKRKQ+  +E       +
Sbjct: 268 CNPLDFQDRLLNALKITKERSKKCCNVIREVTKRETKANRSGKKRKQNEEDEAEEEEDDD 327

Query: 306 EEISRTSSESESEI-----GSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCSSKRT 346
           EE SR S E+E+E      GSPNGV+E NFSCESSNDSW +             C SKRT
Sbjct: 328 EERSRRSLETETESESEGGGSPNGVMEGNFSCESSNDSWGIEEVT-------GCCCSKRT 381

[Close]

BLAST of Sed0008637 vs. NCBI nr
Match: XP_023531415.1 (cyclin-D3-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.9 bits (1008), Expect = 2.9e-105
Identity = 238/367 (64.85%), Postives = 273/367 (74.39%), Query Frame = 0


Query: 4   HPNEQQRQQ--ETEHPISNKNGSTPFV---------EDEELASLLSKEQDQNLQNATLLM 63
           H   QQ+QQ  +TE PI + NG T F+         EDEEL  LL+KE+DQNL    +L 
Sbjct: 24  HQQHQQQQQHLQTEDPIFHDNGGTHFLEQTTHFVACEDEELGYLLAKERDQNL----VLE 83

Query: 64  ASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQL 123
              E+D+AL LARTEAIEWLLKV++F+GFSSVTALLAINYLDRIL  P+FQR+KPW+LQL
Sbjct: 84  RLIERDAALSLARTEAIEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRDKPWLLQL 143

Query: 124 LAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSF 183
           LAVTCISLAAKVEE+ VPLLLDLQVED K+IFE KTIQRMELLVLS L+WKM+PVT VSF
Sbjct: 144 LAVTCISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSF 203

Query: 184 LAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGD 243
           L I   +   G KNQ   +EFF RCE+ILLSLVSD RSV F+PSVMAVSAMV VVEEMGD
Sbjct: 204 LGIVTKR--LGLKNQCIEREFFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGD 263

Query: 244 CN--CNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEE---- 303
           CN  CN LDFQDRLLNA KITKER ++C NVI EI KR+TK NRSGKKRKQ+  +E    
Sbjct: 264 CNCYCNPLDFQDRLLNALKITKERSRKCCNVIREITKRETKANRSGKKRKQNEEDEGEEE 323

Query: 304 ---EEEISRTSSESESEI-----GSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCS 346
              +EE SRTS E+E+E      GSPNGV+E NFSCESS+DSW +             C 
Sbjct: 324 EDDDEERSRTSLETETESESEGGGSPNGVMEGNFSCESSDDSWGIEEVTR-------CCC 377

[Close]

BLAST of Sed0008637 vs. ExPASy Swiss-Prot
Match: P42753 (Cyclin-D3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-1 PE=1 SV=3)

HSP 1 Score: 217.2 bits (552), Expect = 2.8e-55
Identity = 140/327 (42.81%), Postives = 203/327 (62.08%), Query Frame = 0


Query: 12  QETEHPISNKNGSTPFV--------EDEELASLLSKEQDQNLQNATLLMASFEKDSALFL 71
           +E E   S  + S+PFV        EDE+L +L SKE++Q L        S   D  L  
Sbjct: 34  EEVEENSSLSSSSSPFVVLQQDLFWEDEDLVTLFSKEEEQGL--------SCLDDVYLST 93

Query: 72  ARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLAVTCISLAAK 131
            R EA+ W+L+V++ +GFS++ A+LAI YLD+ + S + QR+KPWMLQL++V C+SLAAK
Sbjct: 94  DRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAK 153

Query: 132 VEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFG 191
           VEE  VPLLLD QVE+ KY+FEAKTIQRMELL+LS L+WKM+ +T +SF+     +   G
Sbjct: 154 VEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRR--LG 213

Query: 192 FKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDR 251
            KN +   +F  +C ++LLS++SD R V ++PSV+A + M+ ++E++     + L +Q  
Sbjct: 214 LKNNAHW-DFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDP--FDPLSYQTN 273

Query: 252 LLNAFKITKERVKECRNVIAEIAKRQTKPN---RSGKKRKQHVMEEEEEISRTSSESESE 311
           LL    +TKE+VK C ++I ++   +       +S KKRK H             +S S 
Sbjct: 274 LLGVLNLTKEKVKTCYDLILQLPVDRIGLQIQIQSSKKRKSH-------------DSSSS 333

Query: 312 IGSPNGVIEAN--FSCESSNDSWSVGT 326
           + SP+ VI+AN   S ESSNDSWS  +
Sbjct: 334 LNSPSCVIDANPFNSDESSNDSWSASS 334

[Close]

BLAST of Sed0008637 vs. ExPASy Swiss-Prot
Match: Q9FGQ7 (Cyclin-D3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-2 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.7e-53
Identity = 124/307 (40.39%), Postives = 196/307 (63.84%), Query Frame = 0


Query: 29  EDEELASLLSKEQDQNLQNATLLMASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALL 88
           +D+E+ SL+SKE + N      ++     D  L   R EA++W+L+V S +GF+S+TA+L
Sbjct: 65  DDDEILSLISKENETNPCFGEQIL-----DGFLVSCRKEALDWVLRVKSHYGFTSLTAIL 124

Query: 89  AINYLDRILISPNFQRNKPWMLQLLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKT 148
           A+NY DR + S   Q +KPWM QL+AV  +SLAAKVEE+ VPLLLDLQVE+ +Y+FEAKT
Sbjct: 125 AVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKT 184

Query: 149 IQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDC 208
           IQRMELL+LS LQW+M+PVT +SF      +  FG K    L +F  +CE++L+S+++D 
Sbjct: 185 IQRMELLILSTLQWRMHPVTPISFFDHIIRR--FGSKWHQQL-DFCRKCERLLISVIADT 244

Query: 209 RSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKR 268
           R +R+ PSV+A + M++V EE+    C+ +++Q ++    K+ +E+V EC  ++ E    
Sbjct: 245 RFMRYFPSVLATAIMILVFEELKP--CDEVEYQSQITTLLKVNQEKVNECYELLLE---- 304

Query: 269 QTKPNRSGKKRKQHVMEEEEEISRTSSESESEIGSPNGVIEANFSCESSNDSWSVGTTVH 328
               +   KKR  ++++++               SP+GV++ +   +SSN SW+V TT  
Sbjct: 305 ----HNPSKKRMMNLVDQD---------------SPSGVLDFD---DSSNSSWNVSTTAS 335

Query: 329 LSAADQT 336
           +S++  +
Sbjct: 365 VSSSSSS 335

[Close]

BLAST of Sed0008637 vs. ExPASy Swiss-Prot
Match: Q9SN11 (Cyclin-D3-3 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-3 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.5e-53
Identity = 127/315 (40.32%), Postives = 190/315 (60.32%), Query Frame = 0


Query: 29  EDEELASLLSKEQDQNLQNATLLMASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALL 88
           +D+EL++L+SK++         L      D  L L R +A++W+ KV S +GF+S+TALL
Sbjct: 57  DDDELSTLISKQE-------PCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALL 116

Query: 89  AINYLDRILISPNFQRNKPWMLQLLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKT 148
           A+NY DR + S  FQ +KPWM QL A+ C+SLAAKVEE+ VP LLD QVE+ +Y+FEAKT
Sbjct: 117 AVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKT 176

Query: 149 IQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDC 208
           IQRMELLVLS L W+M+PVT +SF      +  + FK+   L EF  RCE +LLS++ D 
Sbjct: 177 IQRMELLVLSTLDWRMHPVTPISFFDHIIRR--YSFKSHHQL-EFLSRCESLLLSIIPDS 236

Query: 209 RSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKR 268
           R + F PSV+A + MV V+ ++  C+  +  +Q +L+   K+  E+V +C  ++ +    
Sbjct: 237 RFLSFSPSVLATAIMVSVIRDLKMCDEAV--YQSQLMTLLKVDSEKVNKCYELVLD---- 296

Query: 269 QTKPNRSGKKRKQHVMEEEEEISRTSSESESEIGSPNGVIEANFSCESSNDSWSVGTTVH 328
               +   KKR  + M++                SP GV +A+FS +SSN+SW V  +  
Sbjct: 297 ----HSPSKKRMMNWMQQP--------------ASPIGVFDASFSSDSSNESWVVSASAS 337

Query: 329 LSAADQTSCSSKRTK 344
           +S++  +    KR +
Sbjct: 357 VSSSPSSEPLLKRRR 337

[Close]

BLAST of Sed0008637 vs. ExPASy Swiss-Prot
Match: Q8LHA8 (Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-31
Identity = 89/242 (36.78%), Postives = 130/242 (53.72%), Query Frame = 0


Query: 26  PFVEDEELASLLSKEQDQNLQNATLLMASFEKDSALFLARTEAIEWLLKVHSFHGFSSVT 85
           P   DE +A L+ KE D   Q   L     E        R +AI+W+ KVHS++ F  ++
Sbjct: 58  PIDSDEFVALLVEKEMDHQPQRGYL--EKLELGGLECSWRKDAIDWICKVHSYYNFGPLS 117

Query: 86  ALLAINYLDRILISPNFQRNKPWMLQLLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFE 145
             LA+NYLDR L S N   ++ WM QLL+V+C+SLA K+EE  VPL +DLQV D +Y+FE
Sbjct: 118 LYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFE 177

Query: 146 AKTIQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLV 205
           A+ I+RMEL+V+  L+W++  VT  SF+  F  K   G      L  +   C  + +  +
Sbjct: 178 ARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPPSYTLASW---CSDLTVGTL 237

Query: 206 SDCRSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDRL-LNAFKITKERVKECRNVIAE 265
            D R + F PS +A + ++ V+ E        L F   L  +   + KE V  C  ++ E
Sbjct: 238 KDSRFLSFRPSEIAAAVVLAVLAEN-----QFLVFNSALGESEIPVNKEMVMRCYELMVE 289

Query: 266 IA 267
            A
Sbjct: 298 KA 289

[Close]

BLAST of Sed0008637 vs. ExPASy Swiss-Prot
Match: P42751 (Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 134.8 bits (338), Expect = 1.9e-30
Identity = 87/254 (34.25%), Postives = 138/254 (54.33%), Query Frame = 0


Query: 52  MASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQ 111
           ++ F+  S    AR +++ W+LKV +++ F  +TA LA+NY+DR L +        W +Q
Sbjct: 69  LSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQ 128

Query: 112 LLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVS 171
           LLAV C+SLAAK+EE+ VP L D QV   KY+FEAKTI+RMELLVLSVL W++  VT   
Sbjct: 129 LLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFD 188

Query: 172 FLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMG 231
           F++ F  K      + +FL  F     +I+LS + +   + + PS +A +A++ V  E+ 
Sbjct: 189 FISFFAYK---IDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELP 248

Query: 232 DCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHV-MEEEEEI 291
             +  +   +        ++KE++  C  ++  +A    + N      K  V +     +
Sbjct: 249 SLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMAIENNRLNTPKVIAKLRVSVRASSTL 308

Query: 292 SRTSSESESEIGSP 305
           +R S ES     SP
Sbjct: 309 TRPSDESSFSSSSP 319

[Close]

BLAST of Sed0008637 vs. ExPASy TrEMBL
Match: A0A6J1JE32 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111486045 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 7.1e-110
Identity = 241/365 (66.03%), Postives = 273/365 (74.79%), Query Frame = 0


Query: 4   HPNEQQRQQETEHPISNKNGSTPFV---------EDEELASLLSKEQDQNLQNATLLMAS 63
           H  +QQ+  +TE PI   NG T ++         EDEEL SLL+KE+DQNLQN  +L   
Sbjct: 27  HQQQQQQHLQTEDPIFRDNGGTHYLEQTTHFVTFEDEELGSLLAKERDQNLQNGDVLERL 86

Query: 64  FEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLA 123
            E+D+AL LARTEA+EWLLKV++F+GFSSVTALLAINYLDRIL  P+FQRNKPWMLQLLA
Sbjct: 87  IERDAALSLARTEAVEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRNKPWMLQLLA 146

Query: 124 VTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLA 183
           VTCISLAAKVEE+ VPLLLDLQVED K+IFE KTIQRMELLVLS L+WKM+PVT VSFL 
Sbjct: 147 VTCISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLG 206

Query: 184 IFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCN 243
           I   +   G KNQ   +E F RCE+ILLSLVSD RSV F+PSVMAVSAMV VVEEMGDCN
Sbjct: 207 IVTKR--LGLKNQCIERELFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCN 266

Query: 244 --CNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEE------ 303
             CN LDFQDRLLNA KITKER K+C NVI E+ KR+TK NRSGKKRKQ+  +E      
Sbjct: 267 CYCNPLDFQDRLLNALKITKERSKKCCNVIREVTKRETKANRSGKKRKQNEEDEAEEEED 326

Query: 304 --EEEISRTSSE----SESEIGSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCSSK 346
             +EE SRTS E    SESE GSPNGV+E NFSCESSNDSW +             C SK
Sbjct: 327 DDDEERSRTSLETETGSESEGGSPNGVMEGNFSCESSNDSWGMEEVT-------GCCCSK 382

[Close]

BLAST of Sed0008637 vs. ExPASy TrEMBL
Match: A0A6J1EIH3 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111434561 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 4.6e-109
Identity = 239/363 (65.84%), Postives = 274/363 (75.48%), Query Frame = 0


Query: 6   NEQQRQQETEHPISNKNGSTPFV---------EDEELASLLSKEQDQNLQNATLLMASFE 65
           ++QQ+  +TE PI + NG T F+         EDEEL SLL+KE+DQNLQN  +L    E
Sbjct: 28  HQQQQHLQTEDPIFHDNGGTHFLEQTTHFVAFEDEELGSLLAKERDQNLQNGDVLERLIE 87

Query: 66  KDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLAVT 125
           +D+AL LARTEAIEWLLKV++F+GFSSVTALLAINYLDRIL  P+FQR+KPWMLQLLAVT
Sbjct: 88  RDAALSLARTEAIEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRDKPWMLQLLAVT 147

Query: 126 CISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLAIF 185
           CISLAAKVEE+ VPLLLDLQVED K+IFE KTIQRMELLVLS L+WKM+PVT VSFL I 
Sbjct: 148 CISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLGIV 207

Query: 186 NTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCN-- 245
             +   G KNQ   +EFF RCE+ILLSLVSD RSV F+PSVMAVSAMV VVEEMGDCN  
Sbjct: 208 TKR--LGLKNQCIEREFFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCNCY 267

Query: 246 CNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEE-------E 305
           CN LDFQDRLLNA KITKER K+C NVI E+ KR+TK NRSGKKRKQ+  +E       +
Sbjct: 268 CNPLDFQDRLLNALKITKERSKKCCNVIREVTKRETKANRSGKKRKQNEEDEAEEEEDDD 327

Query: 306 EEISRTSSESESEI-----GSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCSSKRT 346
           EE SR S E+E+E      GSPNGV+E NFSCESSNDSW +             C SKRT
Sbjct: 328 EERSRRSLETETESESEGGGSPNGVMEGNFSCESSNDSWGIEEVT-------GCCCSKRT 381

[Close]

BLAST of Sed0008637 vs. ExPASy TrEMBL
Match: A0A6J1D1X4 (B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111016612 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 3.8e-103
Identity = 222/361 (61.50%), Postives = 266/361 (73.68%), Query Frame = 0


Query: 1   MALHPNEQQRQQETEHPISNKNGSTPF---------------VEDEELASLLSKEQDQNL 60
           +A    EQ+++ E E PI + NG+  F                EDEEL  L SKE+DQ+L
Sbjct: 28  LANQEQEQEQEPEAEDPIFDDNGANGFSSCSSILEQPTHLAVCEDEELRGLFSKERDQHL 87

Query: 61  QNATLLMASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRN 120
           QNA++L     +++AL LARTEA+EW+LKV++F+GFSS+TAL AINYLDRIL  P+FQR+
Sbjct: 88  QNASVL-----ENAALSLARTEAVEWVLKVNAFYGFSSLTALFAINYLDRILSGPHFQRD 147

Query: 121 KPWMLQLLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMN 180
           KPWM+QLLAVTCISLAAKVEE+ VPLLLDLQVED KYIFEAKTIQRMELLVLS LQW+M+
Sbjct: 148 KPWMVQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLSALQWRMH 207

Query: 181 PVTCVSFLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVM 240
           PVT VSFL +F      G KN+    EFF RCE+ILLSLVSD RSV F+PSVMAVS MV 
Sbjct: 208 PVTPVSFLGLFTRH--LGLKNRFIESEFFRRCERILLSLVSDSRSVGFLPSVMAVSTMVS 267

Query: 241 VVEEMGDCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVME 300
           V EEMGD  CN LDFQDRLLN  KITK RVK+C NVI E++KR  K  +    +++ + +
Sbjct: 268 VAEEMGD--CNPLDFQDRLLNGLKITKGRVKDCCNVIMEVSKRAAKAEKRRSWKRKQMAK 327

Query: 301 EEEEISRTSSESESEIGSPNGVIEANFSCESSNDSWSVGTTVHLSAADQTSCSSKRTKST 347
           EEE  S   SE+E+E GSPNGV+EANFSCESSNDSW VGT +    +  T CSSKRT+ T
Sbjct: 328 EEETRSEAESEAEAEAGSPNGVMEANFSCESSNDSWGVGTAL----SSPTHCSSKRTRIT 375

[Close]

BLAST of Sed0008637 vs. ExPASy TrEMBL
Match: Q8LK73 (B-like cyclin OS=Lagenaria siceraria OX=3668 PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.5e-96
Identity = 220/358 (61.45%), Postives = 256/358 (71.51%), Query Frame = 0


Query: 3   LHPNEQQRQQETEHPISNKNGSTP-------------FVEDEELASLLSKEQDQNLQNAT 62
           LH  EQQ  Q TEHPI   NG T                EDEEL  LLSKE+DQNLQ   
Sbjct: 26  LHCTEQQHLQ-TEHPIFLNNGGTNDFPLFQQTTTHFLVYEDEELNHLLSKEKDQNLQTGA 85

Query: 63  LLMASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWM 122
           +L    + D+AL LARTEAI+WLLKV++F+GFSS+TALLAINYLDRIL  P FQR+KPWM
Sbjct: 86  VLKTLVQTDNALSLARTEAIDWLLKVNAFYGFSSLTALLAINYLDRILSGPYFQRDKPWM 145

Query: 123 LQLLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTC 182
           LQL AVTCISLAAKVEE+ VPLLLDLQVED KYIFEAKTIQRMELLVL+ LQWKM+PV  
Sbjct: 146 LQLAAVTCISLAAKVEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLTALQWKMHPVAP 205

Query: 183 VSFLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEE 242
           VSFL I  TKG+ G KNQ   +EF  RCE+ILLSLVSD RSV  +PS+MAVSAMV VVEE
Sbjct: 206 VSFLGII-TKGL-GMKNQYIQREFLRRCERILLSLVSDSRSVGILPSIMAVSAMVSVVEE 265

Query: 243 MGDCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEEEEE 302
           MG+CN  L +FQD+LLNA KI K RVKEC  VI E   + +   +  ++  +   E E  
Sbjct: 266 MGNCN-PLEEFQDQLLNALKINKGRVKECCKVIMEAKIKGSGKRKHVEEEAEAEAESESS 325

Query: 303 ISRTSSESESEIGSPNGVIEANFSCESSNDSWSVGTTV--HLSAADQTSCSSKRTKST 346
            + T  E+E+E GSPNGV+EANFSCESSNDSW +GT V  +   +  +S SSKR + T
Sbjct: 326 EAETEGEAEAEAGSPNGVMEANFSCESSNDSWEMGTIVSEYTHFSSSSSSSSKRIRPT 379

[Close]

BLAST of Sed0008637 vs. ExPASy TrEMBL
Match: A0A0A0K7W0 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G072880 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 4.5e-96
Identity = 221/363 (60.88%), Postives = 257/363 (70.80%), Query Frame = 0


Query: 3   LHPNEQQRQQETEHPISNKNGSTP----------FVEDEELASLLSKEQDQNLQNATLLM 62
           LH  EQQ  Q TE PI   NG+T             EDEELA LLSKE+DQNLQ+  +L 
Sbjct: 24  LHCTEQQHHQ-TELPIFLNNGATTTTNFPLSHFLISEDEELAYLLSKEKDQNLQHHAVLE 83

Query: 63  ASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQL 122
              + D+AL LARTE I+WLLKV++F+GFSS+TALLAINYLDRIL  P+FQR+KPWMLQL
Sbjct: 84  TLIQTDNALSLARTEVIDWLLKVNAFYGFSSLTALLAINYLDRILSGPHFQRDKPWMLQL 143

Query: 123 LAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSF 182
           LAVTCISLAAK+EE+ VPLLLDLQVED KYIFE KTIQRMELLVL+ LQWKM+PVT VSF
Sbjct: 144 LAVTCISLAAKIEEIRVPLLLDLQVEDSKYIFEPKTIQRMELLVLTALQWKMHPVTPVSF 203

Query: 183 LAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGD 242
           L I   +  F  KNQ   KEF  RCE++LLS+VSD RSV  +PSVMAVSAMV VVEEMG+
Sbjct: 204 LGIITKE--FVMKNQYIQKEFLRRCERVLLSIVSDSRSVGILPSVMAVSAMVSVVEEMGN 263

Query: 243 CNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEE----EE 302
           CN  L +FQD LLNA KI K RVKEC  VI E   +       G  +++HV E+    E 
Sbjct: 264 CN-PLEEFQDHLLNALKINKGRVKECCKVIMEAKAK-------GSMKRKHVEEKAETGES 323

Query: 303 EISRTSSESESEIGSPNGVIEANFSCESSNDSWSVGTTVHLS------AADQTSCSSKRT 346
               T  E E+E+GSPNGVIEANFSCESSNDSW +GT V  S      ++  +S SSKR 
Sbjct: 324 SEVETEEEEEAEVGSPNGVIEANFSCESSNDSWDMGTIVSASTLYSHFSSSSSSNSSKRI 375

[Close]

BLAST of Sed0008637 vs. TAIR 10
Match: AT4G34160.1 (CYCLIN D3;1 )

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-56
Identity = 140/327 (42.81%), Postives = 203/327 (62.08%), Query Frame = 0


Query: 12  QETEHPISNKNGSTPFV--------EDEELASLLSKEQDQNLQNATLLMASFEKDSALFL 71
           +E E   S  + S+PFV        EDE+L +L SKE++Q L        S   D  L  
Sbjct: 34  EEVEENSSLSSSSSPFVVLQQDLFWEDEDLVTLFSKEEEQGL--------SCLDDVYLST 93

Query: 72  ARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLAVTCISLAAK 131
            R EA+ W+L+V++ +GFS++ A+LAI YLD+ + S + QR+KPWMLQL++V C+SLAAK
Sbjct: 94  DRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAK 153

Query: 132 VEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFG 191
           VEE  VPLLLD QVE+ KY+FEAKTIQRMELL+LS L+WKM+ +T +SF+     +   G
Sbjct: 154 VEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRR--LG 213

Query: 192 FKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDR 251
            KN +   +F  +C ++LLS++SD R V ++PSV+A + M+ ++E++     + L +Q  
Sbjct: 214 LKNNAHW-DFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDP--FDPLSYQTN 273

Query: 252 LLNAFKITKERVKECRNVIAEIAKRQTKPN---RSGKKRKQHVMEEEEEISRTSSESESE 311
           LL    +TKE+VK C ++I ++   +       +S KKRK H             +S S 
Sbjct: 274 LLGVLNLTKEKVKTCYDLILQLPVDRIGLQIQIQSSKKRKSH-------------DSSSS 333

Query: 312 IGSPNGVIEAN--FSCESSNDSWSVGT 326
           + SP+ VI+AN   S ESSNDSWS  +
Sbjct: 334 LNSPSCVIDANPFNSDESSNDSWSASS 334

[Close]

BLAST of Sed0008637 vs. TAIR 10
Match: AT5G67260.1 (CYCLIN D3;2 )

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-54
Identity = 124/307 (40.39%), Postives = 196/307 (63.84%), Query Frame = 0


Query: 29  EDEELASLLSKEQDQNLQNATLLMASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALL 88
           +D+E+ SL+SKE + N      ++     D  L   R EA++W+L+V S +GF+S+TA+L
Sbjct: 65  DDDEILSLISKENETNPCFGEQIL-----DGFLVSCRKEALDWVLRVKSHYGFTSLTAIL 124

Query: 89  AINYLDRILISPNFQRNKPWMLQLLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKT 148
           A+NY DR + S   Q +KPWM QL+AV  +SLAAKVEE+ VPLLLDLQVE+ +Y+FEAKT
Sbjct: 125 AVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKT 184

Query: 149 IQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDC 208
           IQRMELL+LS LQW+M+PVT +SF      +  FG K    L +F  +CE++L+S+++D 
Sbjct: 185 IQRMELLILSTLQWRMHPVTPISFFDHIIRR--FGSKWHQQL-DFCRKCERLLISVIADT 244

Query: 209 RSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKR 268
           R +R+ PSV+A + M++V EE+    C+ +++Q ++    K+ +E+V EC  ++ E    
Sbjct: 245 RFMRYFPSVLATAIMILVFEELKP--CDEVEYQSQITTLLKVNQEKVNECYELLLE---- 304

Query: 269 QTKPNRSGKKRKQHVMEEEEEISRTSSESESEIGSPNGVIEANFSCESSNDSWSVGTTVH 328
               +   KKR  ++++++               SP+GV++ +   +SSN SW+V TT  
Sbjct: 305 ----HNPSKKRMMNLVDQD---------------SPSGVLDFD---DSSNSSWNVSTTAS 335

Query: 329 LSAADQT 336
           +S++  +
Sbjct: 365 VSSSSSS 335

[Close]

BLAST of Sed0008637 vs. TAIR 10
Match: AT3G50070.1 (CYCLIN D3;3 )

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-54
Identity = 127/315 (40.32%), Postives = 190/315 (60.32%), Query Frame = 0


Query: 29  EDEELASLLSKEQDQNLQNATLLMASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALL 88
           +D+EL++L+SK++         L      D  L L R +A++W+ KV S +GF+S+TALL
Sbjct: 57  DDDELSTLISKQE-------PCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALL 116

Query: 89  AINYLDRILISPNFQRNKPWMLQLLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKT 148
           A+NY DR + S  FQ +KPWM QL A+ C+SLAAKVEE+ VP LLD QVE+ +Y+FEAKT
Sbjct: 117 AVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKT 176

Query: 149 IQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDC 208
           IQRMELLVLS L W+M+PVT +SF      +  + FK+   L EF  RCE +LLS++ D 
Sbjct: 177 IQRMELLVLSTLDWRMHPVTPISFFDHIIRR--YSFKSHHQL-EFLSRCESLLLSIIPDS 236

Query: 209 RSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKR 268
           R + F PSV+A + MV V+ ++  C+  +  +Q +L+   K+  E+V +C  ++ +    
Sbjct: 237 RFLSFSPSVLATAIMVSVIRDLKMCDEAV--YQSQLMTLLKVDSEKVNKCYELVLD---- 296

Query: 269 QTKPNRSGKKRKQHVMEEEEEISRTSSESESEIGSPNGVIEANFSCESSNDSWSVGTTVH 328
               +   KKR  + M++                SP GV +A+FS +SSN+SW V  +  
Sbjct: 297 ----HSPSKKRMMNWMQQP--------------ASPIGVFDASFSSDSSNESWVVSASAS 337

Query: 329 LSAADQTSCSSKRTK 344
           +S++  +    KR +
Sbjct: 357 VSSSPSSEPLLKRRR 337

[Close]

BLAST of Sed0008637 vs. TAIR 10
Match: AT1G70210.1 (CYCLIN D1;1 )

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-31
Identity = 87/254 (34.25%), Postives = 138/254 (54.33%), Query Frame = 0


Query: 52  MASFEKDSALFLARTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQ 111
           ++ F+  S    AR +++ W+LKV +++ F  +TA LA+NY+DR L +        W +Q
Sbjct: 69  LSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQ 128

Query: 112 LLAVTCISLAAKVEEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVS 171
           LLAV C+SLAAK+EE+ VP L D QV   KY+FEAKTI+RMELLVLSVL W++  VT   
Sbjct: 129 LLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFD 188

Query: 172 FLAIFNTKGIFGFKNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMG 231
           F++ F  K      + +FL  F     +I+LS + +   + + PS +A +A++ V  E+ 
Sbjct: 189 FISFFAYK---IDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELP 248

Query: 232 DCNCNLLDFQDRLLNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHV-MEEEEEI 291
             +  +   +        ++KE++  C  ++  +A    + N      K  V +     +
Sbjct: 249 SLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMAIENNRLNTPKVIAKLRVSVRASSTL 308

Query: 292 SRTSSESESEIGSP 305
           +R S ES     SP
Sbjct: 309 TRPSDESSFSSSSP 319

[Close]

BLAST of Sed0008637 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 129.4 bits (324), Expect = 5.5e-30
Identity = 86/246 (34.96%), Postives = 141/246 (57.32%), Query Frame = 0


Query: 65  RTEAIEWLLKVHSFHGFSSVTALLAINYLDRILISPNFQRNKPWMLQLLAVTCISLAAKV 124
           R +A++W+LKV + + F  +   L++NYLDR L S    ++K W  QLLAV+C+SLA+K+
Sbjct: 97  RNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKM 156

Query: 125 EEVHVPLLLDLQVEDCKYIFEAKTIQRMELLVLSVLQWKMNPVTCVSFLAIFNTKGIFGF 184
           EE  VP ++DLQVED K++FEAKTI+RMELLV++ L W++  +T  SF+  F  K I G 
Sbjct: 157 EETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDK-ISGH 216

Query: 185 KNQSFLKEFFWRCEQILLSLVSDCRSVRFVPSVMAVSAMVMVVEEMGDCNCNLLDFQDRL 244
            +++ +    +R  + +L+       + F PS +A +A V  V   G+  C  +D +  L
Sbjct: 217 VSENLI----YRSSRFILNTTKAIEFLDFRPSEIAAAAAVS-VSISGETEC--IDEEKAL 276

Query: 245 LNAFKITKERVKECRNVIAEIAKRQTKPNRSGKKRKQHVMEEEEEISRTSSESESEIGSP 304
            +   + +ERVK C N++  +   +         R   + +E+  ++  +  +     SP
Sbjct: 277 SSLIYVKQERVKRCLNLMRSLTGEE-------NVRGTSLSQEQARVAVRAVPA-----SP 322

Query: 305 NGVIEA 311
            GV+EA
Sbjct: 337 VGVLEA 322

The following BLAST results are available for this feature:

BLAST of Sed0008637 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988812.1	1.5e-109	66.03	cyclin-D3-1-like [Cucurbita maxima]	[more]
KAG6588684.1	4.3e-109	65.93	Cyclin-D3-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7022470.1	4.3e-109	65.93	Cyclin-D3-1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927751.1	9.6e-109	65.84	cyclin-D3-1-like [Cucurbita moschata]	[more]
XP_023531415.1	2.9e-105	64.85	cyclin-D3-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0008637 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42753	2.8e-55	42.81	Cyclin-D3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-1 PE=1 SV=3	[more]
Q9FGQ7	2.7e-53	40.39	Cyclin-D3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-2 PE=1 SV=1	[more]
Q9SN11	3.5e-53	40.32	Cyclin-D3-3 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-3 PE=2 SV=1	[more]
Q8LHA8	3.7e-31	36.78	Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1	[more]
P42751	1.9e-30	34.25	Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3	[more]

BLAST of Sed0008637 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JE32	7.1e-110	66.03	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111486045 PE=3 SV=1	[more]
A0A6J1EIH3	4.6e-109	65.84	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111434561 PE=3 SV=1	[more]
A0A6J1D1X4	3.8e-103	61.50	B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111016612 PE=3 SV=1	[more]
Q8LK73	1.5e-96	61.45	B-like cyclin OS=Lagenaria siceraria OX=3668 PE=2 SV=1	[more]
A0A0A0K7W0	4.5e-96	60.88	B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G072880 PE=3 SV=1	[more]

BLAST of Sed0008637 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34160.1	2.0e-56	42.81	CYCLIN D3;1	[more]
AT5G67260.1	1.9e-54	40.39	CYCLIN D3;2	[more]
AT3G50070.1	2.5e-54	40.32	CYCLIN D3;3	[more]
AT1G70210.1	1.3e-31	34.25	CYCLIN D1;1	[more]
AT2G22490.1	5.5e-30	34.96	Cyclin D2;1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 70..158 e-value: 8.2E-17 score: 71.9
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 65..157 e-value: 4.93341E-15 score: 67.6488
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 39..165 e-value: 7.9E-25 score: 87.1
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 65..96
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 167..281 e-value: 6.1E-13 score: 48.9
None	No IPR available	GENE3D	1.10.472.10		coord: 35..260 e-value: 1.6E-37 score: 131.0
None	No IPR available	GENE3D	1.10.472.10		coord: 46..165 e-value: 1.6E-37 score: 131.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..310
None	No IPR available	PANTHER	PTHR10177:SF384	CYCLIN-D3-1	coord: 12..317
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 12..317
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 28..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008637.1	Sed0008637.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044772	mitotic cell cycle phase transition
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity