Sed0008565 (gene) Chayote v1

Overview


Name	Sed0008565
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor bHLH84-like
Location	LG07: 9507937 .. 9509336 (-)
RNA-Seq Expression	Sed0008565
Synteny	Sed0008565

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCAATAGGAGCCATTTCTGAAAGAGAATGGATCTCTCTCAGTGGAACATATGTAGCTGAAGAATCTGATTTCATGGCTAATTTGCTCAATAATTATTGTCTTTCAAATGAGCTAAATTCAGATTTGAGTTTGGAAATCCCATCTGCTTATTGGGCTGCAGCTATGGATGAACAACCTTACACCTTCACTGATTCTCACCCTCTTTGGTTGCCCAATTCTGCCACTTTGTCCTTGGATTTCTCCCTGGAGGATGTCGAGAATGCCGACTCCTCCGCTCGGTTGGACGGCGACAATTCGTGTCGAAAAACAAGGCAATGCAGGCTGCAACAGTCCCCTGCTGACCCTGAAGCTGCTGTAGCTGCTGTCAATGGGAAGAGCCCACAACTTAAGAAAGCCGAGATGACAGCGGAGGAAGAAGCTACGAGAGACGAGAATGTTGCATCAATGTCGGTAGGCGGAAACTCGAAGAAGCGATCCCAAAGTTTACCTGATGTGAGTTTGACAATCCAAACTCATTTACAATTTTTTCTAATTCAACAACAACAATTGAGAGGGGGGAATTCGAATCCGTAACCAATTGTCTATGTCATTTACATTAAGGACTGTTTGTTTGTTCTTTTTTGTTTTTTCGATCCTAACGGCATAGAGGTTTGTGATTAGGTAATGAAGGTTGAAAAGACGAAGAGGGGTGGGAGGGCACGGAAGATCCCGAAGCTTGGTTCGGCTAGGTGCAACGAAGAGGATCACATTGGGCAATGCACAAGCAGCTTCAGCTCTGAGGATGATTGTAATGAGGCTCAAGAAAACAATGGTGGAATCAGTTCAAGTTCAAGTTTGACCTCAAATGGAAAGACAAGAGCAAGTAGAGGCTCAGCCACAGATCCTCAAAGCCTTTATGCAAGGGTAATCCTGTAAAATCCAAGCCACTCCCCTGTTACTTTCCATTTCCCAAACACATTGAAACTAAATTGCAACTCTTTTCAACTTTCCTTCAGAAAAGAAGAGAAAGAATCAATGAAAGGCTGAGAATCTTACAAACCCTCGTCCCGAATGGCACGAAGGTAAGCTGATATCTCACGATCATGCCCAAACCGTCTCGGCGTTTGAGTACTCCATGAATGATATATCTTGGCTTGCAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTTGAATATGTGAAGTTTTTGCAGCTTCAAATCAAGGTAACTGTTTGAATCAATCTTTCATTTCATATTATTTATTTTTGAATTCAAGGTCTGATTTTGTGTTGAATCTATTGTAATTTGCAGTTGTTGAGCTCTGATGATCTGTGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGTTCATGAAGCATGACAATGCATCACAATAA

mRNA sequence

ATGGAACCAATAGGAGCCATTTCTGAAAGAGAATGGATCTCTCTCAGTGGAACATATGTAGCTGAAGAATCTGATTTCATGGCTAATTTGCTCAATAATTATTGTCTTTCAAATGAGCTAAATTCAGATTTGAGTTTGGAAATCCCATCTGCTTATTGGGCTGCAGCTATGGATGAACAACCTTACACCTTCACTGATTCTCACCCTCTTTGGTTGCCCAATTCTGCCACTTTGTCCTTGGATTTCTCCCTGGAGGATGTCGAGAATGCCGACTCCTCCGCTCGGTTGGACGGCGACAATTCGTGTCGAAAAACAAGGCAATGCAGGCTGCAACAGTCCCCTGCTGACCCTGAAGCTGCTGTAGCTGCTGTCAATGGGAAGAGCCCACAACTTAAGAAAGCCGAGATGACAGCGGAGGAAGAAGCTACGAGAGACGAGAATGTTGCATCAATGTCGGTAGGCGGAAACTCGAAGAAGCGATCCCAAAGTTTACCTGATGTTGAAAAGACGAAGAGGGGTGGGAGGGCACGGAAGATCCCGAAGCTTGGTTCGGCTAGGTGCAACGAAGAGGATCACATTGGGCAATGCACAAGCAGCTTCAGCTCTGAGGATGATTGTAATGAGGCTCAAGAAAACAATGGTGGAATCAGTTCAAGTTCAAGTTTGACCTCAAATGGAAAGACAAGAGCAAGTAGAGGCTCAGCCACAGATCCTCAAAGCCTTTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGCTGAGAATCTTACAAACCCTCGTCCCGAATGGCACGAAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTTGAATATGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGCTCTGATGATCTGTGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGTTCATGAAGCATGACAATGCATCACAATAA

Coding sequence (CDS)

ATGGAACCAATAGGAGCCATTTCTGAAAGAGAATGGATCTCTCTCAGTGGAACATATGTAGCTGAAGAATCTGATTTCATGGCTAATTTGCTCAATAATTATTGTCTTTCAAATGAGCTAAATTCAGATTTGAGTTTGGAAATCCCATCTGCTTATTGGGCTGCAGCTATGGATGAACAACCTTACACCTTCACTGATTCTCACCCTCTTTGGTTGCCCAATTCTGCCACTTTGTCCTTGGATTTCTCCCTGGAGGATGTCGAGAATGCCGACTCCTCCGCTCGGTTGGACGGCGACAATTCGTGTCGAAAAACAAGGCAATGCAGGCTGCAACAGTCCCCTGCTGACCCTGAAGCTGCTGTAGCTGCTGTCAATGGGAAGAGCCCACAACTTAAGAAAGCCGAGATGACAGCGGAGGAAGAAGCTACGAGAGACGAGAATGTTGCATCAATGTCGGTAGGCGGAAACTCGAAGAAGCGATCCCAAAGTTTACCTGATGTTGAAAAGACGAAGAGGGGTGGGAGGGCACGGAAGATCCCGAAGCTTGGTTCGGCTAGGTGCAACGAAGAGGATCACATTGGGCAATGCACAAGCAGCTTCAGCTCTGAGGATGATTGTAATGAGGCTCAAGAAAACAATGGTGGAATCAGTTCAAGTTCAAGTTTGACCTCAAATGGAAAGACAAGAGCAAGTAGAGGCTCAGCCACAGATCCTCAAAGCCTTTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGCTGAGAATCTTACAAACCCTCGTCCCGAATGGCACGAAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTTGAATATGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGCTCTGATGATCTGTGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGTTCATGAAGCATGACAATGCATCACAATAA

Protein sequence

MEPIGAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWAAAMDEQPYTFTDSHPLWLPNSATLSLDFSLEDVENADSSARLDGDNSCRKTRQCRLQQSPADPEAAVAAVNGKSPQLKKAEMTAEEEATRDENVASMSVGGNSKKRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHIGQCTSSFSSEDDCNEAQENNGGISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLFMKHDNASQ

Homology

[Close]

BLAST of Sed0008565 vs. NCBI nr
Match: XP_038903006.1 (transcription factor bHLH84-like [Benincasa hispida])

HSP 1 Score: 427.6 bits (1098), Expect = 9.8e-116
Identity = 257/363 (70.80%), Postives = 272/363 (74.93%), Query Frame = 0


Query: 1   MEPIGAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWA------ 60
           MEPIGAISEREWISLSG Y AEESDFMANLLNNYCL NELNSDLSLEIPSAYWA      
Sbjct: 1   MEPIGAISEREWISLSGAYTAEESDFMANLLNNYCLPNELNSDLSLEIPSAYWASNEPPP 60

Query: 61  ----AAMDE------------------------QPYTFTDSHPLWLPNS-ATLSLDFSLE 120
               AAMDE                         PYTFTDSHPLWLPN+ A+LSLDFS+E
Sbjct: 61  SLTMAAMDEPSYYSSDASDSSNVYNLPPANNNNHPYTFTDSHPLWLPNNGASLSLDFSME 120

Query: 121 DVENADSSARLDGDNSCRKTRQCRLQQSPADPEAAVAAVNGKSPQLK-KAEMTAEEEATR 180
           DV NAD  A  +G N  RKTRQCRLQ S ADP      +NGKS Q K +AE    EE  R
Sbjct: 121 DVGNADCLADDNGSN-VRKTRQCRLQHSSADP-----VLNGKSSQPKRRAEEATMEETMR 180

Query: 181 DENVASMSVGGNSKKRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDH-----IGQCTSS 240
           D+ V  +SV   S+KRSQSL DVEKTKR  RARK  K+ SA CNE+DH      GQCTSS
Sbjct: 181 DDKVVPVSVENVSRKRSQSLLDVEKTKRSVRARKSSKIASASCNEDDHHIVSPNGQCTSS 240

Query: 241 FSSEDDCNEAQENNGGISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQT 300
           FSSEDDCNE QE NGGI+SSS  TSNGK RASRGSATDPQSLYARKRRERINERLRILQ+
Sbjct: 241 FSSEDDCNEPQEINGGITSSS--TSNGKPRASRGSATDPQSLYARKRRERINERLRILQS 300

Query: 301 LVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL-FMKHDN 322
           LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSD+LWMYAPIAYNGMDIGLNL  MK DN
Sbjct: 301 LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLNLKLMKQDN 355

[Close]

BLAST of Sed0008565 vs. NCBI nr
Match: XP_022149290.1 (transcription factor bHLH84-like [Momordica charantia])

HSP 1 Score: 419.1 bits (1076), Expect = 3.5e-113
Identity = 252/367 (68.66%), Postives = 273/367 (74.39%), Query Frame = 0


Query: 1   MEPIGAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWA------ 60
           ME IGAISEREWISLSGTY AEESDFM NLL+NYCL NELNS LSLEIP +YWA      
Sbjct: 1   MESIGAISEREWISLSGTYTAEESDFMVNLLSNYCLPNELNSGLSLEIPPSYWAANEPSP 60

Query: 61  ----AAMDE----------------------QPYTFTDSHPLWLPNSATLSLDFSLEDVE 120
               AAM+E                       PY+  DSHPLW PN A+LSLDFS+EDV 
Sbjct: 61  ALAMAAMEEPSYYSSDASDSSNIYGLPQGNNNPYSLNDSHPLWFPNGASLSLDFSMEDVG 120

Query: 121 NADSSARLDGDN-SCRKTRQCRLQQSPADPEAAVAAVNGKSPQLKKAEMTAEEEATRDEN 180
           N D SARLD DN S +KTRQCRLQQSP +  A  AA+NGKS Q K+      EEA RD+ 
Sbjct: 121 N-DDSARLDDDNGSSQKTRQCRLQQSPTN-SAVAAAINGKSSQPKRRTEVTAEEAMRDDE 180

Query: 181 VA-SMSVGGNSKKRSQSLPDVEKTKRGGRARKIPKLGS-ARCNEEDHI----GQCTSSFS 240
           VA ++S+  N KKRS SLPDVEKTKR  R+RK PKL S + CNEEDHI    GQ TSSFS
Sbjct: 181 VAPTISIDDNPKKRSPSLPDVEKTKRSVRSRKSPKLASGSSCNEEDHIVSPNGQSTSSFS 240

Query: 241 SEDDCNEAQENNGGISS------SSSLTSNGKTRASRGSATDPQSLYARKRRERINERLR 300
           SEDDCNE QE N G++S      S+SLTSNGK RASRGSATDPQSLYARKRRERINERLR
Sbjct: 241 SEDDCNEPQEINCGVTSSTNSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLR 300

Query: 301 ILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN-LFM 322
           ILQ+LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN   M
Sbjct: 301 ILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNSKLM 360

[Close]

BLAST of Sed0008565 vs. NCBI nr
Match: XP_004152375.1 (transcription factor bHLH84 [Cucumis sativus] >KGN52770.1 hypothetical protein Csa_014823 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 1.2e-110
Identity = 246/348 (70.69%), Postives = 267/348 (76.72%), Query Frame = 0


Query: 5   GAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWAAAMDEQ---- 64
           GAISEREWISLSG Y AEESDFMANLL+NYC+ NELNSDLSLEIPS+YWA++ +      
Sbjct: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYYSS 62

Query: 65  ------------------PYTFTDSHP-LWLPNS-ATLSLDFSLEDVENADSSARLDGDN 124
                             PYTF DS+P LWLPN+ A+LSLDFS+EDV NAD     D  +
Sbjct: 63  DASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLD--DNGS 122

Query: 125 SCRKTRQC-RLQQSPADPEAAVAAVNGKSPQLK-KAEMTAEEEATRDENVASMSVGGNSK 184
           + RKTRQC RLQQSPAD     + VNGKS Q K +A     EEA RD+ V  +SV   S+
Sbjct: 123 NIRKTRQCSRLQQSPAD-----SVVNGKSSQPKRRANDVMVEEAMRDDKVGPVSVENFSR 182

Query: 185 KRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHI----GQCTSSFSSEDDCNEAQENNG 244
           KR QSL DVEKTKR GRARK  K+ S  CNEED I    GQCTSSFSSEDDCNEAQENNG
Sbjct: 183 KRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNG 242

Query: 245 GISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLE 304
           GI+SSS  TSNGK RASRGSATDPQSLYARKRRERINERLRILQ+LVPNGTKVDISTMLE
Sbjct: 243 GITSSS--TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 302

Query: 305 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL-FMKHDNASQ 322
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL  MK DNASQ
Sbjct: 303 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 341

[Close]

BLAST of Sed0008565 vs. NCBI nr
Match: XP_008454391.1 (PREDICTED: transcription factor bHLH84-like [Cucumis melo] >KAA0044344.1 transcription factor bHLH84-like [Cucumis melo var. makuwa])

HSP 1 Score: 409.1 bits (1050), Expect = 3.6e-110
Identity = 242/348 (69.54%), Postives = 267/348 (76.72%), Query Frame = 0


Query: 5   GAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWAAAMDEQ---- 64
           GAISEREWISLSG Y AEESDFMANLLNNYC+ NELNSDL+LEIPS+YWA++ +      
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASSNEPSYYSS 63

Query: 65  ------------------PYTFTDSHPLWLPN--SATLSLDFSLEDVENADSSARLDGDN 124
                             PYTF +S+PLW+PN  +++LSLDFS+EDV NAD     D  +
Sbjct: 64  DASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGNADCLD--DNGS 123

Query: 125 SCRKTRQC-RLQQSPADPEAAVAAVNGKSPQLK-KAEMTAEEEATRDENVASMSVGGNSK 184
           + RKTRQC RLQQSPAD     + VNGKS Q K +A+    EEA RD+ V  +SV   S+
Sbjct: 124 NIRKTRQCSRLQQSPAD-----SVVNGKSSQQKRRADGVMVEEAMRDDKVGPVSVENASR 183

Query: 185 KRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHI----GQCTSSFSSEDDCNEAQENNG 244
           KR QSL DVEKTKR GRARK  K+ S  CNEED I    GQCTSSFSSEDDCNEAQE NG
Sbjct: 184 KRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQEING 243

Query: 245 GISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLE 304
           GI+SSS  TSNGK RASRGSATDPQSLYARKRRERINERLRILQ+LVPNGTKVDISTMLE
Sbjct: 244 GITSSS--TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 303

Query: 305 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL-FMKHDNASQ 322
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL  MK DNASQ
Sbjct: 304 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0008565 vs. NCBI nr
Match: TYK29473.1 (transcription factor bHLH84-like [Cucumis melo var. makuwa])

HSP 1 Score: 408.7 bits (1049), Expect = 4.7e-110
Identity = 242/348 (69.54%), Postives = 267/348 (76.72%), Query Frame = 0


Query: 5   GAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWAAAMDEQ---- 64
           GAISEREWISLSG Y AEESDFMANLLNNYC+ NELNSDL+LEIPS+YWA++ +      
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASSNEPSYYSS 63

Query: 65  ------------------PYTFTDSHPLWLPN--SATLSLDFSLEDVENADSSARLDGDN 124
                             PYTF +S+PLW+PN  +++LSLDFS+EDV NAD     D  +
Sbjct: 64  DASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGNADCLD--DNGS 123

Query: 125 SCRKTRQC-RLQQSPADPEAAVAAVNGKSPQLK-KAEMTAEEEATRDENVASMSVGGNSK 184
           + RKTRQC RLQQSPAD     + VNGKS Q K +A+    EEA RD+ V  +SV   S+
Sbjct: 124 NIRKTRQCSRLQQSPAD-----SVVNGKSSQPKRRADGVMVEEAMRDDKVGPVSVENASR 183

Query: 185 KRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHI----GQCTSSFSSEDDCNEAQENNG 244
           KR QSL DVEKTKR GRARK  K+ S  CNEED I    GQCTSSFSSEDDCNEAQE NG
Sbjct: 184 KRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQEING 243

Query: 245 GISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLE 304
           GI+SSS  TSNGK RASRGSATDPQSLYARKRRERINERLRILQ+LVPNGTKVDISTMLE
Sbjct: 244 GITSSS--TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 303

Query: 305 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL-FMKHDNASQ 322
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL  MK DNASQ
Sbjct: 304 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0008565 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.1e-40
Identity = 104/175 (59.43%), Postives = 122/175 (69.71%), Query Frame = 0


Query: 156 NSKKRSQSLPDVEKTKRGGRARKIPKL-----GSARCNEEDHIGQC-----TSSFSSEDD 215
           +SKKR+++    +K KR  +AR+  K       +    EE++  +      T     +  
Sbjct: 148 SSKKRTRA-TTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKT 207

Query: 216 CNEAQENNGGIS--------SSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRIL 275
           C    E+NGG +         S +L  NGKTRASRG+ATDPQSLYARKRRERINERLRIL
Sbjct: 208 CCSDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 267

Query: 276 QTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL 313
           Q LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+L
Sbjct: 268 QHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDL 321

[Close]

BLAST of Sed0008565 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.5e-38
Identity = 111/256 (43.36%), Postives = 157/256 (61.33%), Query Frame = 0


Query: 79  SLDFSLEDVENADSSARLDGDNSCRKTRQCRLQQSPADPEAAVAAVNGKSPQLKKAEMTA 138
           ++DF +EDV   ++++ L G+    +T +C +++  +           ++   +++ + +
Sbjct: 103 TMDFGMEDV-TINTNSYLVGE----ETSECDVEKYSSGKTLMPLETVVENHDDEESLLQS 162

Query: 139 EEEATRDENVASMSVGGNSKKRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHIGQ--- 198
           E   T  +++     G   + R+ S    ++ +   RA+K  ++       E+  G+   
Sbjct: 163 EISVTTTKSL----TGSKKRSRATSTDKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKL 222

Query: 199 -------------CTSSFSSEDDCNEAQENNGGISSSS-------SLTSNGKTRASRGSA 258
                         +++F +E++ N A ++ GG  SSS       +L  NGKTRASRG+A
Sbjct: 223 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAA 282

Query: 259 TDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDL 312
           TDPQSLYARKRRERINERLRILQ LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDL
Sbjct: 283 TDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 342

[Close]

BLAST of Sed0008565 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-33
Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 197 TSSFSSEDDCNEAQENNGGISSSS-----SLTS-NGKTRASRGSATDPQSLYARKRRERI 256
           +S  ++ D+ N    +   +S+SS     S+TS  GKTRA++G+ATDPQSLYARKRRE+I
Sbjct: 130 SSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKI 189

Query: 257 NERLRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL 312
           NERL+ LQ LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G 
Sbjct: 190 NERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGF 249

[Close]

BLAST of Sed0008565 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.2e-33
Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 194 GQCTSSFSSEDDCNEAQENNGGISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINER 253
           GQ  SS++S DD     E   G+ S++S +   K +A+RG A+DPQSLYARKRRERIN+R
Sbjct: 103 GQSLSSYNSSDD-----EKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDR 162

Query: 254 LRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 312
           L+ LQ+LVPNGTKVDISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++GL+
Sbjct: 163 LKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLH 215

[Close]

BLAST of Sed0008565 vs. ExPASy Swiss-Prot
Match: Q2QQ32 (Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.2e-23
Identity = 54/71 (76.06%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 234 SATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSD 293
           SA   QS YA+ RR+RINERLRILQ L+PNGTKVDISTMLEEA++YVKFL LQIKLLSSD
Sbjct: 114 SAESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSD 173

Query: 294 DLWMYAPIAYN 305
           ++WMYAP+A++
Sbjct: 174 EMWMYAPLAFD 184

[Close]

BLAST of Sed0008565 vs. ExPASy TrEMBL
Match: A0A6J1D5B1 (transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.7e-113
Identity = 252/367 (68.66%), Postives = 273/367 (74.39%), Query Frame = 0


Query: 1   MEPIGAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWA------ 60
           ME IGAISEREWISLSGTY AEESDFM NLL+NYCL NELNS LSLEIP +YWA      
Sbjct: 1   MESIGAISEREWISLSGTYTAEESDFMVNLLSNYCLPNELNSGLSLEIPPSYWAANEPSP 60

Query: 61  ----AAMDE----------------------QPYTFTDSHPLWLPNSATLSLDFSLEDVE 120
               AAM+E                       PY+  DSHPLW PN A+LSLDFS+EDV 
Sbjct: 61  ALAMAAMEEPSYYSSDASDSSNIYGLPQGNNNPYSLNDSHPLWFPNGASLSLDFSMEDVG 120

Query: 121 NADSSARLDGDN-SCRKTRQCRLQQSPADPEAAVAAVNGKSPQLKKAEMTAEEEATRDEN 180
           N D SARLD DN S +KTRQCRLQQSP +  A  AA+NGKS Q K+      EEA RD+ 
Sbjct: 121 N-DDSARLDDDNGSSQKTRQCRLQQSPTN-SAVAAAINGKSSQPKRRTEVTAEEAMRDDE 180

Query: 181 VA-SMSVGGNSKKRSQSLPDVEKTKRGGRARKIPKLGS-ARCNEEDHI----GQCTSSFS 240
           VA ++S+  N KKRS SLPDVEKTKR  R+RK PKL S + CNEEDHI    GQ TSSFS
Sbjct: 181 VAPTISIDDNPKKRSPSLPDVEKTKRSVRSRKSPKLASGSSCNEEDHIVSPNGQSTSSFS 240

Query: 241 SEDDCNEAQENNGGISS------SSSLTSNGKTRASRGSATDPQSLYARKRRERINERLR 300
           SEDDCNE QE N G++S      S+SLTSNGK RASRGSATDPQSLYARKRRERINERLR
Sbjct: 241 SEDDCNEPQEINCGVTSSTNSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLR 300

Query: 301 ILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN-LFM 322
           ILQ+LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN   M
Sbjct: 301 ILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNSKLM 360

[Close]

BLAST of Sed0008565 vs. ExPASy TrEMBL
Match: A0A0A0KT10 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 6.0e-111
Identity = 246/348 (70.69%), Postives = 267/348 (76.72%), Query Frame = 0


Query: 5   GAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWAAAMDEQ---- 64
           GAISEREWISLSG Y AEESDFMANLL+NYC+ NELNSDLSLEIPS+YWA++ +      
Sbjct: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYYSS 62

Query: 65  ------------------PYTFTDSHP-LWLPNS-ATLSLDFSLEDVENADSSARLDGDN 124
                             PYTF DS+P LWLPN+ A+LSLDFS+EDV NAD     D  +
Sbjct: 63  DASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLD--DNGS 122

Query: 125 SCRKTRQC-RLQQSPADPEAAVAAVNGKSPQLK-KAEMTAEEEATRDENVASMSVGGNSK 184
           + RKTRQC RLQQSPAD     + VNGKS Q K +A     EEA RD+ V  +SV   S+
Sbjct: 123 NIRKTRQCSRLQQSPAD-----SVVNGKSSQPKRRANDVMVEEAMRDDKVGPVSVENFSR 182

Query: 185 KRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHI----GQCTSSFSSEDDCNEAQENNG 244
           KR QSL DVEKTKR GRARK  K+ S  CNEED I    GQCTSSFSSEDDCNEAQENNG
Sbjct: 183 KRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNG 242

Query: 245 GISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLE 304
           GI+SSS  TSNGK RASRGSATDPQSLYARKRRERINERLRILQ+LVPNGTKVDISTMLE
Sbjct: 243 GITSSS--TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 302

Query: 305 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL-FMKHDNASQ 322
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL  MK DNASQ
Sbjct: 303 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 341

[Close]

BLAST of Sed0008565 vs. ExPASy TrEMBL
Match: A0A5A7TMH6 (Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00700 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.7e-110
Identity = 242/348 (69.54%), Postives = 267/348 (76.72%), Query Frame = 0


Query: 5   GAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWAAAMDEQ---- 64
           GAISEREWISLSG Y AEESDFMANLLNNYC+ NELNSDL+LEIPS+YWA++ +      
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASSNEPSYYSS 63

Query: 65  ------------------PYTFTDSHPLWLPN--SATLSLDFSLEDVENADSSARLDGDN 124
                             PYTF +S+PLW+PN  +++LSLDFS+EDV NAD     D  +
Sbjct: 64  DASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGNADCLD--DNGS 123

Query: 125 SCRKTRQC-RLQQSPADPEAAVAAVNGKSPQLK-KAEMTAEEEATRDENVASMSVGGNSK 184
           + RKTRQC RLQQSPAD     + VNGKS Q K +A+    EEA RD+ V  +SV   S+
Sbjct: 124 NIRKTRQCSRLQQSPAD-----SVVNGKSSQQKRRADGVMVEEAMRDDKVGPVSVENASR 183

Query: 185 KRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHI----GQCTSSFSSEDDCNEAQENNG 244
           KR QSL DVEKTKR GRARK  K+ S  CNEED I    GQCTSSFSSEDDCNEAQE NG
Sbjct: 184 KRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQEING 243

Query: 245 GISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLE 304
           GI+SSS  TSNGK RASRGSATDPQSLYARKRRERINERLRILQ+LVPNGTKVDISTMLE
Sbjct: 244 GITSSS--TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 303

Query: 305 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL-FMKHDNASQ 322
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL  MK DNASQ
Sbjct: 304 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0008565 vs. ExPASy TrEMBL
Match: A0A1S3BZ99 (transcription factor bHLH84-like OS=Cucumis melo OX=3656 GN=LOC103494806 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.7e-110
Identity = 242/348 (69.54%), Postives = 267/348 (76.72%), Query Frame = 0


Query: 5   GAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWAAAMDEQ---- 64
           GAISEREWISLSG Y AEESDFMANLLNNYC+ NELNSDL+LEIPS+YWA++ +      
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASSNEPSYYSS 63

Query: 65  ------------------PYTFTDSHPLWLPN--SATLSLDFSLEDVENADSSARLDGDN 124
                             PYTF +S+PLW+PN  +++LSLDFS+EDV NAD     D  +
Sbjct: 64  DASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGNADCLD--DNGS 123

Query: 125 SCRKTRQC-RLQQSPADPEAAVAAVNGKSPQLK-KAEMTAEEEATRDENVASMSVGGNSK 184
           + RKTRQC RLQQSPAD     + VNGKS Q K +A+    EEA RD+ V  +SV   S+
Sbjct: 124 NIRKTRQCSRLQQSPAD-----SVVNGKSSQQKRRADGVMVEEAMRDDKVGPVSVENASR 183

Query: 185 KRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHI----GQCTSSFSSEDDCNEAQENNG 244
           KR QSL DVEKTKR GRARK  K+ S  CNEED I    GQCTSSFSSEDDCNEAQE NG
Sbjct: 184 KRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQEING 243

Query: 245 GISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLE 304
           GI+SSS  TSNGK RASRGSATDPQSLYARKRRERINERLRILQ+LVPNGTKVDISTMLE
Sbjct: 244 GITSSS--TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 303

Query: 305 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL-FMKHDNASQ 322
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL  MK DNASQ
Sbjct: 304 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0008565 vs. ExPASy TrEMBL
Match: A0A5D3E098 (Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00700 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.3e-110
Identity = 242/348 (69.54%), Postives = 267/348 (76.72%), Query Frame = 0


Query: 5   GAISEREWISLSGTYVAEESDFMANLLNNYCLSNELNSDLSLEIPSAYWAAAMDEQ---- 64
           GAISEREWISLSG Y AEESDFMANLLNNYC+ NELNSDL+LEIPS+YWA++ +      
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASSNEPSYYSS 63

Query: 65  ------------------PYTFTDSHPLWLPN--SATLSLDFSLEDVENADSSARLDGDN 124
                             PYTF +S+PLW+PN  +++LSLDFS+EDV NAD     D  +
Sbjct: 64  DASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGNADCLD--DNGS 123

Query: 125 SCRKTRQC-RLQQSPADPEAAVAAVNGKSPQLK-KAEMTAEEEATRDENVASMSVGGNSK 184
           + RKTRQC RLQQSPAD     + VNGKS Q K +A+    EEA RD+ V  +SV   S+
Sbjct: 124 NIRKTRQCSRLQQSPAD-----SVVNGKSSQPKRRADGVMVEEAMRDDKVGPVSVENASR 183

Query: 185 KRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHI----GQCTSSFSSEDDCNEAQENNG 244
           KR QSL DVEKTKR GRARK  K+ S  CNEED I    GQCTSSFSSEDDCNEAQE NG
Sbjct: 184 KRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQEING 243

Query: 245 GISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLE 304
           GI+SSS  TSNGK RASRGSATDPQSLYARKRRERINERLRILQ+LVPNGTKVDISTMLE
Sbjct: 244 GITSSS--TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 303

Query: 305 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL-FMKHDNASQ 322
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL  MK DNASQ
Sbjct: 304 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0008565 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 6.5e-41
Identity = 104/175 (59.43%), Postives = 122/175 (69.71%), Query Frame = 0


Query: 156 NSKKRSQSLPDVEKTKRGGRARKIPKL-----GSARCNEEDHIGQC-----TSSFSSEDD 215
           +SKKR+++    +K KR  +AR+  K       +    EE++  +      T     +  
Sbjct: 148 SSKKRTRA-TTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKT 207

Query: 216 CNEAQENNGGIS--------SSSSLTSNGKTRASRGSATDPQSLYARKRRERINERLRIL 275
           C    E+NGG +         S +L  NGKTRASRG+ATDPQSLYARKRRERINERLRIL
Sbjct: 208 CCSDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 267

Query: 276 QTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNL 313
           Q LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+L
Sbjct: 268 QHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDL 321

[Close]

BLAST of Sed0008565 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 159.1 bits (401), Expect = 6.0e-39
Identity = 111/256 (43.36%), Postives = 157/256 (61.33%), Query Frame = 0


Query: 79  SLDFSLEDVENADSSARLDGDNSCRKTRQCRLQQSPADPEAAVAAVNGKSPQLKKAEMTA 138
           ++DF +EDV   ++++ L G+    +T +C +++  +           ++   +++ + +
Sbjct: 103 TMDFGMEDV-TINTNSYLVGE----ETSECDVEKYSSGKTLMPLETVVENHDDEESLLQS 162

Query: 139 EEEATRDENVASMSVGGNSKKRSQSLPDVEKTKRGGRARKIPKLGSARCNEEDHIGQ--- 198
           E   T  +++     G   + R+ S    ++ +   RA+K  ++       E+  G+   
Sbjct: 163 EISVTTTKSL----TGSKKRSRATSTDKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKL 222

Query: 199 -------------CTSSFSSEDDCNEAQENNGGISSSS-------SLTSNGKTRASRGSA 258
                         +++F +E++ N A ++ GG  SSS       +L  NGKTRASRG+A
Sbjct: 223 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAA 282

Query: 259 TDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDL 312
           TDPQSLYARKRRERINERLRILQ LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDL
Sbjct: 283 TDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 342

[Close]

BLAST of Sed0008565 vs. TAIR 10
Match: AT2G14760.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.9e-38
Identity = 104/188 (55.32%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 156 NSKKRSQSLPDVEKTKRGGRARKIPKL-----GSARCNEEDHIGQC-----TSSFSSEDD 215
           +SKKR+++    +K KR  +AR+  K       +    EE++  +      T     +  
Sbjct: 148 SSKKRTRA-TTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKT 207

Query: 216 CNEAQENNGGIS--------SSSSLTSNGKTRASRGSATDPQSLYAR------------- 275
           C    E+NGG +         S +L  NGKTRASRG+ATDPQSLYAR             
Sbjct: 208 CCSDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQ 267

Query: 276 KRRERINERLRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYN 313
           KRRERINERLRILQ LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYN
Sbjct: 268 KRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYN 327

[Close]

BLAST of Sed0008565 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-34
Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 197 TSSFSSEDDCNEAQENNGGISSSS-----SLTS-NGKTRASRGSATDPQSLYARKRRERI 256
           +S  ++ D+ N    +   +S+SS     S+TS  GKTRA++G+ATDPQSLYARKRRE+I
Sbjct: 130 SSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKI 189

Query: 257 NERLRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL 312
           NERL+ LQ LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G 
Sbjct: 190 NERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGF 249

[Close]

BLAST of Sed0008565 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 5.9e-34
Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 194 GQCTSSFSSEDDCNEAQENNGGISSSSSLTSNGKTRASRGSATDPQSLYARKRRERINER 253
           GQ  SS++S DD     E   G+ S++S +   K +A+RG A+DPQSLYARKRRERIN+R
Sbjct: 103 GQSLSSYNSSDD-----EKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDR 162

Query: 254 LRILQTLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 312
           L+ LQ+LVPNGTKVDISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++GL+
Sbjct: 163 LKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLH 215

The following BLAST results are available for this feature:

BLAST of Sed0008565 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903006.1	9.8e-116	70.80	transcription factor bHLH84-like [Benincasa hispida]	[more]
XP_022149290.1	3.5e-113	68.66	transcription factor bHLH84-like [Momordica charantia]	[more]
XP_004152375.1	1.2e-110	70.69	transcription factor bHLH84 [Cucumis sativus] >KGN52770.1 hypothetical protein C...	[more]
XP_008454391.1	3.6e-110	69.54	PREDICTED: transcription factor bHLH84-like [Cucumis melo] >KAA0044344.1 transcr...	[more]
TYK29473.1	4.7e-110	69.54	transcription factor bHLH84-like [Cucumis melo var. makuwa]	[more]

BLAST of Sed0008565 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XHI9	9.1e-40	59.43	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
Q84WK0	8.5e-38	43.36	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]
Q8LEG1	1.7e-33	67.77	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q3E7L7	8.2e-33	66.10	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
Q2QQ32	1.2e-23	76.06	Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133...	[more]

BLAST of Sed0008565 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5B1	1.7e-113	68.66	transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 ...	[more]
A0A0A0KT10	6.0e-111	70.69	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 S...	[more]
A0A5A7TMH6	1.7e-110	69.54	Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BZ99	1.7e-110	69.54	transcription factor bHLH84-like OS=Cucumis melo OX=3656 GN=LOC103494806 PE=4 SV...	[more]
A0A5D3E098	2.3e-110	69.54	Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Sed0008565 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14760.1	6.5e-41	59.43	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G33880.1	6.0e-39	43.36	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT2G14760.3	3.9e-38	55.32	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	1.2e-34	67.77	root hair defective 6-like 4	[more]
AT5G43175.1	5.9e-34	66.10	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 240..289 e-value: 1.1E-11 score: 54.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 244..284 e-value: 1.8E-9 score: 37.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 234..283 score: 15.357671
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 236..292 e-value: 4.5E-12 score: 47.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 234..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..241
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 4..315
None	No IPR available	PANTHER	PTHR16223:SF232	TRANSCRIPTION FACTOR BHLH84-LIKE	coord: 4..315
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 235..297 e-value: 4.16278E-37 score: 125.197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008565.1	Sed0008565.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding