Sed0008527 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGTTGGACATCCTCCTCCTGGAGGATATCCCCCACCTGGAGGGTACCCTCCAGCTCATGGTTATCCACCTCAAGGATATCCCCCTGGCCCCCAAGGCTACCCTCCGGCTGGCTATCCGCAGGGCGGTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACACCATTCAGGTATTGATCCTATTTTACACATGTTGGTCTGGAAGAATTATTAGATCATTAATTTAGTTAAGAATTATTAGCATACATGGGTTGTTAATGATTTCAATTTTTATAAGGCTATGTATAGACTCTTACTTTTGAGTTATTATTGAATACTTTTGAAACTTTTCACTATGGAAGTTATGGTAGTTTCTCCAATGAGAGTTTATCAAGTGTCCTTGAGATGAACCATAACAAAGTAACCGACTGGCCAAGAGTGCATAAGTATCTAACAGGTGTGACTCATACTTTGAAAATAATTTTCCACGTGTGTCCTTGACATACAAAAGTTGTAGGATCAATCGGTATCTCCTAAGAGAATAGTTGAGGTGCTCGTTAACAGGTCTGGCCACTCACAGATATTGAAAAAAATAAAAATCTAGTGTCCTAGAGATGGACTTCCCAGTTACATTGGCTCTTAATGCTGTCTACCGAAAGCTGCTGCATCTATAAGTATTATAATTGTTTTGAAGCGAAACTACTGTCAGTAAAATTTCTGGTTTGATTGCAATCTCTTTTATAAAGTTGCTGATCCCGAATATTCTTAAATTCAGGACATGGTGTAGGAGGAATGCTCGCGGGTGGTGCTGCTGCTGCAGCAGCTGCATATGGAGCTCACCATCTCGCCCACGGTGCAGCCCATGGTGCTGGTCATCTCCCCCACGGTGCTGCTCATTACGGTCACGGTCATGGTCATGGTGGAAAGTTCAAGAACCATGGCAAGGTCAAGCACGGGAAGTTCGGGAAGCACAAACACGGGAAGCACGGCATGTACGGTGGTGGCAAATTCAAGAAGTGGAAGTAA ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGTTGGACATCCTCCTCCTGGAGGATATCCCCCACCTGGAGGGTACCCTCCAGCTCATGGTTATCCACCTCAAGGATATCCCCCTGGCCCCCAAGGCTACCCTCCGGCTGGCTATCCGCAGGGCGGTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACACCATTCAGGACATGGTGTAGGAGGAATGCTCGCGGGTGGTGCTGCTGCTGCAGCAGCTGCATATGGAGCTCACCATCTCGCCCACGGTGCAGCCCATGGTGCTGGTCATCTCCCCCACGGTGCTGCTCATTACGGTCACGGTCATGGTCATGGTGGAAAGTTCAAGAACCATGGCAAGGTCAAGCACGGGAAGTTCGGGAAGCACAAACACGGGAAGCACGGCATGTACGGTGGTGGCAAATTCAAGAAGTGGAAGTAA ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGTTGGACATCCTCCTCCTGGAGGATATCCCCCACCTGGAGGGTACCCTCCAGCTCATGGTTATCCACCTCAAGGATATCCCCCTGGCCCCCAAGGCTACCCTCCGGCTGGCTATCCGCAGGGCGGTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACACCATTCAGGACATGGTGTAGGAGGAATGCTCGCGGGTGGTGCTGCTGCTGCAGCAGCTGCATATGGAGCTCACCATCTCGCCCACGGTGCAGCCCATGGTGCTGGTCATCTCCCCCACGGTGCTGCTCATTACGGTCACGGTCATGGTCATGGTGGAAAGTTCAAGAACCATGGCAAGGTCAAGCACGGGAAGTTCGGGAAGCACAAACACGGGAAGCACGGCATGTACGGTGGTGGCAAATTCAAGAAGTGGAAGTAA MGGGKDKHDESDKGLFSHLAHGVAHGVGHPPPGGYPPPGGYPPAHGYPPQGYPPGPQGYPPAGYPQGGYPPGAYPGPSAPHHSGHGVGGMLAGGAAAAAAAYGAHHLAHGAAHGAGHLPHGAAHYGHGHGHGGKFKNHGKVKHGKFGKHKHGKHGMYGGGKFKKWK Homology
BLAST of Sed0008527 vs. NCBI nr
Match: XP_004150942.2 (glycine-rich protein A3 [Cucumis sativus] >KGN53470.1 hypothetical protein Csa_014664 [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 2.5e-67 Identity = 145/176 (82.39%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Sed0008527 vs. NCBI nr
Match: XP_023553494.1 (glycine-rich protein A3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261.2 bits (666), Expect = 6.3e-66 Identity = 145/180 (80.56%), Postives = 150/180 (83.33%), Query Frame = 0
BLAST of Sed0008527 vs. NCBI nr
Match: XP_022931474.1 (glycine-rich protein A3-like [Cucurbita moschata] >XP_022931475.1 glycine-rich protein A3-like [Cucurbita moschata] >XP_022931476.1 glycine-rich protein A3-like [Cucurbita moschata] >XP_022931477.1 glycine-rich protein A3-like [Cucurbita moschata] >KAG7015107.1 hypothetical protein SDJN02_22740, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65 Identity = 144/180 (80.00%), Postives = 149/180 (82.78%), Query Frame = 0
BLAST of Sed0008527 vs. NCBI nr
Match: XP_022984947.1 (glycine-rich protein A3-like [Cucurbita maxima] >XP_022984948.1 glycine-rich protein A3-like [Cucurbita maxima] >XP_022984949.1 glycine-rich protein A3-like [Cucurbita maxima] >XP_022984950.1 glycine-rich protein A3-like [Cucurbita maxima]) HSP 1 Score: 259.2 bits (661), Expect = 2.4e-65 Identity = 144/180 (80.00%), Postives = 149/180 (82.78%), Query Frame = 0
BLAST of Sed0008527 vs. NCBI nr
Match: XP_022136842.1 (glycine-rich protein A3-like [Momordica charantia] >XP_022136843.1 glycine-rich protein A3-like [Momordica charantia] >XP_022136844.1 glycine-rich protein A3-like [Momordica charantia]) HSP 1 Score: 257.7 bits (657), Expect = 6.9e-65 Identity = 141/171 (82.46%), Postives = 145/171 (84.80%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23 Identity = 91/155 (58.71%), Postives = 99/155 (63.87%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy Swiss-Prot
Match: P24639 (Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 9.9e-06 Identity = 36/61 (59.02%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 9.9e-06 Identity = 41/89 (46.07%), Postives = 47/89 (52.81%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05 Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.2e-05 Identity = 44/82 (53.66%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy TrEMBL
Match: A0A0A0KV55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056610 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67 Identity = 145/176 (82.39%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy TrEMBL
Match: A0A6J1ETR5 (glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111437642 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 8.8e-66 Identity = 144/180 (80.00%), Postives = 149/180 (82.78%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy TrEMBL
Match: A0A6J1J3I6 (glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111483065 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65 Identity = 144/180 (80.00%), Postives = 149/180 (82.78%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy TrEMBL
Match: A0A6J1C8M2 (glycine-rich protein A3-like OS=Momordica charantia OX=3673 GN=LOC111008440 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.4e-65 Identity = 141/171 (82.46%), Postives = 145/171 (84.80%), Query Frame = 0
BLAST of Sed0008527 vs. ExPASy TrEMBL
Match: A0A5A7TDL9 (Glycine-rich protein A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002540 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.4e-65 Identity = 143/172 (83.14%), Postives = 147/172 (85.47%), Query Frame = 0
BLAST of Sed0008527 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein ) HSP 1 Score: 135.6 bits (340), Expect = 3.7e-32 Identity = 107/186 (57.53%), Postives = 117/186 (62.90%), Query Frame = 0
BLAST of Sed0008527 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein ) HSP 1 Score: 133.3 bits (334), Expect = 1.8e-31 Identity = 104/198 (52.53%), Postives = 112/198 (56.57%), Query Frame = 0
BLAST of Sed0008527 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein ) HSP 1 Score: 133.3 bits (334), Expect = 1.8e-31 Identity = 104/198 (52.53%), Postives = 112/198 (56.57%), Query Frame = 0
BLAST of Sed0008527 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein ) HSP 1 Score: 122.5 bits (306), Expect = 3.2e-28 Identity = 96/170 (56.47%), Postives = 104/170 (61.18%), Query Frame = 0
BLAST of Sed0008527 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein ) HSP 1 Score: 113.2 bits (282), Expect = 2.0e-25 Identity = 92/189 (48.68%), Postives = 106/189 (56.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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