Sed0008452 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCAATACAAATAGCAGAGAGCACATGTTGTGGATTTGAGCTAACACTCTCTGTTTTTTTACCTCTTTCTCTGCCTTTGATTTCACTGTCTTTCCGGTCGCCCGAGTTTGTCATGGGCGGCGCTCCGCCGTATTTGGAGCTGTTTGTGGAAGAGACTAGCTTCTACAACCGCATTGTTTTGGCCAACATTTTTCCTGCCTTTGCTTTGGACCCATTTCCTCATATTCTTCAAACCTGGCTTAGAAACTGCATTGCCGGATTCCTAATTTACTTCTTCTCTGGATTTATTTGGTGCTTTTACATCTATTTCTGGAAGCACAACGTCTATGTTCCTAAAGGTGTTTCCATTTTCCCCATTTAGGGGCATCTAATTCTGGTTATTGGGTTCTGTTATTCCACTTTCTTCTTTGATCTCCTTCATGCTATTTCTGATTTGTTTTATTTGATTCTTATTGGATTTGCTATAACAACTGTCTTCAAGGCTTTGATTCTGATAAGCTTGACGACGAGGTTGTTCTTCGACTGTTTTTACTGACTTCTAATTCACGAAAGCGGTCAAGAGGGCATTAGAAAAGTAAGAGGCGATGAGTTAAATCCACGGTAGCTAATTTTTTAGGAAGGTGTTTGGTTGTGAAATTGTTGAGTGATTAGAAATTTGAGTTTTAGTAATAGCTCGTTTGGATATAGTTATTTGTAGAGCGGTTACAGCTAATAGGTATTTTTTTGTTTTGAAAACCAGGAAATCAGAGCTTTGCTCCCCTATCCCCAGGGCACCATTGGTTCGTCCCTAGATTGTGACACCGGAATACTATGAAGGGGTATTCTAGTTTAAGCGCTTTCCAGCGGCCTCGAACCAGAGATCTCTCAAGAAAGCATGTTTTGAAATCCTTAGCCTCAACCGCTGAGCTGTCCCTTGAAGACCAGTTAATAAGTTGTTTGCATGATAATTTGTGCAGAGAAGTTACAAATAATAGCTCGTTTAGATGTGGTTAGAAATGAGTGATTATTTCGAGGGGTTAGAAATGAATGTATAATTAAACAATGAGTAATTAGAAATGAATTATTATTTTGAGTGGTTAAAAATAGTGATTAAAAATAGGTGATTATTTTGAGTAATTAGAAATGAGTATTTATTTTGAGTGATTATAATAGCTCGTTTGAATATAATTATTTAATGAGAAGTTGTAAAAATTTATACCTATTAGCTCATTAATTCCTTCAAACAAACACTTCCTATGGGATTTCTTGACATTCAAATATTGTAGGATGAAGCAGTAATATCTCATGACATTAGTCGATAGGTGCGCGCAAGTTGCCTTGGATAGTCATCGATATAAAAAATAAATCACAAACAATATTGTTTAATCATCTACTGGTTCTTGTCAAATTAGATTTCCCAAGAGGCCTGTTTTATTTGTGCAAGTTGATGTTCTGAAAAGAACTGTAACGACCATGATATAACAATGAAACTTCAGAATTGATGGACTCTTTGTCTGTAACTACTCCTCGTCCTCAGTTAGCTACTCAAAGAGTTGTTTTTCAAATGGATGATTCTTCTATTCATGAACATGTAGGAATAAAGAAAGGACATGTTTCTCTTTGGGCATCGGTCACATGGTTCGGTTGTTCTGTAATTGTTCTTAACTTGTATAGGGTTGATGGGTGAAAGGAGCATCAATAGGACATTAGAGGGCTTGAGAGGGACCTTAGTGATGTATGATCCTTTATTAGGTTCCATATTTTTCTTTGGGCGTTGGTTGTTTAGTAATTATTCTTTCTGTCTTATTTTATTTGATCCGAGCCCCTTCCTTAAAAAGGAATTCTCTTATGAACCTATGACGCTGGTGTTGAACTGGTTTACAAGAAAACAATCAAACCATTGCGCCACAGACCCATTTGGTCCCTTATTTGGACTATTGTTTTAATATGTTGTATTTTTCCCCAAGAGGTAGCACATAGGTCGAAGAGTTGGACCTTTGAAGGTGTGCTCTCCTTAGTCCAAGGTTCGAGATTCACGTGTGATATTAATTTATAGACATCTTTTGTATCTTCATTTTTTCGATATCTTCCAGTGTCTCGCCTATGAATGGGTGTGGTTACCCCTAGTATAGTGGAGCAAAACTCCGTCGTTCTATTCTTTGATTTTGCTGAGTGAAAAGCTCGATTGTTTTTCAAAAAATGTTTAAAGAAAGGTCATGTCTAAAAGATTTGAAAAGTAAAAACTTGTTAATATTTTGTTCAATTTTTTCTTTCCTAAATAGCCATTGGTATAAGTTGTGCATCTTTATTGTAATAGTTCATAGGATCTTATAAATTGTTTGCCAGCCTATTTTCCAGTTTCTTCTGGTTATTTCATTTGGACAAACATTCTGACTAATAGAATCTCCTTCAAGAATCTTTCTTAGTCTTGGCCAATTAAGAAGATCACTCACACATATGGTGTTAGTGATTTAATTTTAGGAACTGTTTTTCATATGTGGTTTCTCAGCAATCTTGACTAATTTCATGGAGTAATAATTTCCCTATTTTTTTATATTGGCAGCTTCAAGAAACTTGTGTGTAGGTAGGTGGCTATTAAATATCGTAAGAAAATAGAGTTTGTTAAAACTTGTACACTTTTATATTGGAAAGTTTTCTCCAATGTTAATTTTTTTCAATTTATTAATTCTGTATGATATTATTTTCCATTTTTTGTTGGCTATTATTGGTCCAATTTTCAATCTAATAATTTTAATACTTTTCCCACAAACCTCATCAGCAGTACAAGACATCAGGCTTTTGAAACCAATACATTCATTTTGATGTATAAAAGTTTTCATTTAAGATGCATAGAGTATGTATGTAAGAATCCAAGAAACTTTTATTTAGACTTGCAATATCTTTCATGTCAAAGCAAAAAAAAAATATCATAGCTCAATGCTAGTATAATTGTTTGACCTGCTGGGCGCTTGATTGCAGATTTGATCCCGTCGAATAAATCGATGCTCTTGCAAATCCGTGCAACAGTCAAGGCCATGCCAGTGTACTGCATCCTTCCGACGTTTTGCGAATACGTAGTCGAACACGGTTGGACGAAATGCTATTCTAGAGTACTCGATGTCGGATTGCTTGCATATGGCTTCCATGTAATTACTTATCTTACATTTGTAGAGTTTTTTATTTATTGGATGCATAGGGCGCTGCATGATATAAAGCCTCTTTACAAGTATCTTCATGCTCAGCATCATGTGTACAACAAGAAAGTTACTCTCTCTCCCTTTGCTGGTAAGTCCTTAATTTGCTTTCTCAATTCTTGACAACCACTTGCTATACATCTTGCCATTCATGCCAAAAAAACTTATTTGAAAAGATTGCTATTGTTAACTATTAGGAACAACAGGCATTTAAACAACACTTTTGTTCCATTAAAGCTATCAGAATTTGTAAATCATGCCAATTGGAGAAAAATATTGGCCTAGTGTGAACAGTCAAGAGTGGCTGGTTCCCTCCATACGAATTACTTAGATCCTGTTTGATAACTTTTTGACTTTTTTGTTTTTGGTTTTTGATTTTAAAGCTTATTTTTACTCAAATTTCCTACAATATATTTTAATTTTCCTACAAATGTATCCATATTTCCTTAAGAAAGTATGTGAATGCTATCCAAATTTCAAAAACAAAAGTAAACTTTGGAAGTTACATTTTTTGTTTCTAAATTTTGGTTTGGCTTTTAAAATTATAGATGAAATGTAGATATTCGAGTAAGAAAAAACATATGGTAAAATAGTTGTTATAGGCTTAAAGAGGAAATCATCTGATGAATGGTCTCTCGTTGTATGGCAGGACTAGCATTTCACCCAATCGACGGGATATTGCAGGCAATACCTCATTTGTTCGCTCTATTTCTCATTCCAACCCATTTTAGAACACATACCCTGCTGCTATTCTTCGAGGCGATATGGACCGCGAACATTCACGATTGCATCCACTCACAAATGTGGCCAGTCATGGGTGCTGGCTACCACACAATTCATCATACAAGATACCGCTACAACTATGGTCATTTCTCCGTATGGATGGATTGGATGTTCGGTACGCTTCTTGACCCAATGGATATAGAAACCAAGTTGTCGTGACCGGTTGCTTCGACATTGTTATATCTTTGTGTCAATGTAGATCTAGTAGGTTATTGATGAAGTAAAGTCTTCTTATTATGTTATAGGATAGTTCTTATTGCTGGACAATTGGTAAGAAAAAAACTTGTGAAGGCATTATTTGTACCTTTGTATATCTTAGTTTAAATAAAAATTTGTGATGTGACAAAA CATCAATACAAATAGCAGAGAGCACATGTTGTGGATTTGAGCTAACACTCTCTGTTTTTTTACCTCTTTCTCTGCCTTTGATTTCACTGTCTTTCCGGTCGCCCGAGTTTGTCATGGGCGGCGCTCCGCCGTATTTGGAGCTGTTTGTGGAAGAGACTAGCTTCTACAACCGCATTGTTTTGGCCAACATTTTTCCTGCCTTTGCTTTGGACCCATTTCCTCATATTCTTCAAACCTGGCTTAGAAACTGCATTGCCGGATTCCTAATTTACTTCTTCTCTGGATTTATTTGGTGCTTTTACATCTATTTCTGGAAGCACAACGTCTATGTTCCTAAAGATTTGATCCCGTCGAATAAATCGATGCTCTTGCAAATCCGTGCAACAGTCAAGGCCATGCCAGTGTACTGCATCCTTCCGACGTTTTGCGAATACGTAGTCGAACACGGTTGGACGAAATGCTATTCTAGAGTACTCGATGTCGGATTGCTTGCATATGGCTTCCATGTAATTACTTATCTTACATTTGTAGAGTTTTTTATTTATTGGATGCATAGGGCGCTGCATGATATAAAGCCTCTTTACAAGTATCTTCATGCTCAGCATCATGTGTACAACAAGAAAGTTACTCTCTCTCCCTTTGCTGGACTAGCATTTCACCCAATCGACGGGATATTGCAGGCAATACCTCATTTGTTCGCTCTATTTCTCATTCCAACCCATTTTAGAACACATACCCTGCTGCTATTCTTCGAGGCGATATGGACCGCGAACATTCACGATTGCATCCACTCACAAATGTGGCCAGTCATGGGTGCTGGCTACCACACAATTCATCATACAAGATACCGCTACAACTATGGTCATTTCTCCGTATGGATGGATTGGATGTTCGGTACGCTTCTTGACCCAATGGATATAGAAACCAAGTTGTCGTGACCGGTTGCTTCGACATTGTTATATCTTTGTGTCAATGTAGATCTAGTAGGTTATTGATGAAGTAAAGTCTTCTTATTATGTTATAGGATAGTTCTTATTGCTGGACAATTGGTAAGAAAAAAACTTGTGAAGGCATTATTTGTACCTTTGTATATCTTAGTTTAAATAAAAATTTGTGATGTGACAAAA ATGGGCGGCGCTCCGCCGTATTTGGAGCTGTTTGTGGAAGAGACTAGCTTCTACAACCGCATTGTTTTGGCCAACATTTTTCCTGCCTTTGCTTTGGACCCATTTCCTCATATTCTTCAAACCTGGCTTAGAAACTGCATTGCCGGATTCCTAATTTACTTCTTCTCTGGATTTATTTGGTGCTTTTACATCTATTTCTGGAAGCACAACGTCTATGTTCCTAAAGATTTGATCCCGTCGAATAAATCGATGCTCTTGCAAATCCGTGCAACAGTCAAGGCCATGCCAGTGTACTGCATCCTTCCGACGTTTTGCGAATACGTAGTCGAACACGGTTGGACGAAATGCTATTCTAGAGTACTCGATGTCGGATTGCTTGCATATGGCTTCCATGTAATTACTTATCTTACATTTGTAGAGTTTTTTATTTATTGGATGCATAGGGCGCTGCATGATATAAAGCCTCTTTACAAGTATCTTCATGCTCAGCATCATGTGTACAACAAGAAAGTTACTCTCTCTCCCTTTGCTGGACTAGCATTTCACCCAATCGACGGGATATTGCAGGCAATACCTCATTTGTTCGCTCTATTTCTCATTCCAACCCATTTTAGAACACATACCCTGCTGCTATTCTTCGAGGCGATATGGACCGCGAACATTCACGATTGCATCCACTCACAAATGTGGCCAGTCATGGGTGCTGGCTACCACACAATTCATCATACAAGATACCGCTACAACTATGGTCATTTCTCCGTATGGATGGATTGGATGTTCGGTACGCTTCTTGACCCAATGGATATAGAAACCAAGTTGTCGTGA MGGAPPYLELFVEETSFYNRIVLANIFPAFALDPFPHILQTWLRNCIAGFLIYFFSGFIWCFYIYFWKHNVYVPKDLIPSNKSMLLQIRATVKAMPVYCILPTFCEYVVEHGWTKCYSRVLDVGLLAYGFHVITYLTFVEFFIYWMHRALHDIKPLYKYLHAQHHVYNKKVTLSPFAGLAFHPIDGILQAIPHLFALFLIPTHFRTHTLLLFFEAIWTANIHDCIHSQMWPVMGAGYHTIHHTRYRYNYGHFSVWMDWMFGTLLDPMDIETKLS Homology
BLAST of Sed0008452 vs. NCBI nr
Match: XP_004150515.1 (delta(7)-sterol-C5(6)-desaturase [Cucumis sativus] >KGN54626.1 hypothetical protein Csa_012304 [Cucumis sativus]) HSP 1 Score: 520.4 bits (1339), Expect = 9.5e-144 Identity = 233/272 (85.66%), Postives = 251/272 (92.28%), Query Frame = 0
BLAST of Sed0008452 vs. NCBI nr
Match: XP_022998219.1 (delta(7)-sterol-C5(6)-desaturase-like [Cucurbita maxima]) HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142 Identity = 230/274 (83.94%), Postives = 249/274 (90.88%), Query Frame = 0
BLAST of Sed0008452 vs. NCBI nr
Match: XP_008444093.1 (PREDICTED: delta(7)-sterol-C5(6)-desaturase-like [Cucumis melo]) HSP 1 Score: 515.8 bits (1327), Expect = 2.3e-142 Identity = 232/272 (85.29%), Postives = 249/272 (91.54%), Query Frame = 0
BLAST of Sed0008452 vs. NCBI nr
Match: XP_038894105.1 (delta(7)-sterol-C5(6)-desaturase-like [Benincasa hispida] >XP_038894106.1 delta(7)-sterol-C5(6)-desaturase-like [Benincasa hispida] >XP_038894107.1 delta(7)-sterol-C5(6)-desaturase-like [Benincasa hispida]) HSP 1 Score: 515.4 bits (1326), Expect = 3.0e-142 Identity = 231/272 (84.93%), Postives = 247/272 (90.81%), Query Frame = 0
BLAST of Sed0008452 vs. NCBI nr
Match: KAG6607054.1 (hypothetical protein SDJN03_00396, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 513.8 bits (1322), Expect = 8.9e-142 Identity = 230/274 (83.94%), Postives = 248/274 (90.51%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy Swiss-Prot
Match: Q9ZT29 (Delta(7)-sterol-C5(6)-desaturase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-109 Identity = 177/266 (66.54%), Postives = 212/266 (79.70%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy Swiss-Prot
Match: Q39208 (Delta(7)-sterol-C5(6)-desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=STE1 PE=1 SV=2) HSP 1 Score: 389.0 bits (998), Expect = 4.3e-107 Identity = 173/261 (66.28%), Postives = 212/261 (81.23%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy Swiss-Prot
Match: Q9M883 (Putative Delta(7)-sterol-C5(6)-desaturase 2 OS=Arabidopsis thaliana OX=3702 GN=HDF7 PE=3 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 5.1e-100 Identity = 162/261 (62.07%), Postives = 203/261 (77.78%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy Swiss-Prot
Match: O75845 (Lathosterol oxidase OS=Homo sapiens OX=9606 GN=SC5D PE=1 SV=2) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-22 Identity = 75/252 (29.76%), Postives = 124/252 (49.21%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy Swiss-Prot
Match: Q9EQS5 (Lathosterol oxidase OS=Rattus norvegicus OX=10116 GN=Sc5d PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-22 Identity = 72/233 (30.90%), Postives = 122/233 (52.36%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy TrEMBL
Match: A0A0A0L3B9 (Fatty acid hydroxylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G409800 PE=3 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 4.6e-144 Identity = 233/272 (85.66%), Postives = 251/272 (92.28%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy TrEMBL
Match: A0A6J1KDR9 (delta(7)-sterol-C5(6)-desaturase-like OS=Cucurbita maxima OX=3661 GN=LOC111492934 PE=3 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 6.6e-143 Identity = 230/274 (83.94%), Postives = 249/274 (90.88%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy TrEMBL
Match: A0A1S3BAC7 (delta(7)-sterol-C5(6)-desaturase-like OS=Cucumis melo OX=3656 GN=LOC103487532 PE=3 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 1.1e-142 Identity = 232/272 (85.29%), Postives = 249/272 (91.54%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy TrEMBL
Match: A0A6J1GB39 (delta(7)-sterol-C5(6)-desaturase-like OS=Cucurbita moschata OX=3662 GN=LOC111452401 PE=3 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 5.6e-142 Identity = 229/274 (83.58%), Postives = 248/274 (90.51%), Query Frame = 0
BLAST of Sed0008452 vs. ExPASy TrEMBL
Match: A0A6J1GYF7 (delta(7)-sterol-C5(6)-desaturase-like OS=Cucurbita moschata OX=3662 GN=LOC111457984 PE=3 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 5.2e-140 Identity = 225/272 (82.72%), Postives = 244/272 (89.71%), Query Frame = 0
BLAST of Sed0008452 vs. TAIR 10
Match: AT3G02580.1 (sterol 1 ) HSP 1 Score: 389.0 bits (998), Expect = 3.1e-108 Identity = 173/261 (66.28%), Postives = 212/261 (81.23%), Query Frame = 0
BLAST of Sed0008452 vs. TAIR 10
Match: AT3G02590.1 (Fatty acid hydroxylase superfamily protein ) HSP 1 Score: 365.5 bits (937), Expect = 3.6e-101 Identity = 162/261 (62.07%), Postives = 203/261 (77.78%), Query Frame = 0
BLAST of Sed0008452 vs. TAIR 10
Match: AT1G69640.1 (sphingoid base hydroxylase 1 ) HSP 1 Score: 49.7 bits (117), Expect = 4.4e-06 Identity = 42/152 (27.63%), Postives = 70/152 (46.05%), Query Frame = 0
BLAST of Sed0008452 vs. TAIR 10
Match: AT1G02205.2 (Fatty acid hydroxylase superfamily ) HSP 1 Score: 48.9 bits (115), Expect = 7.5e-06 Identity = 46/146 (31.51%), Postives = 66/146 (45.21%), Query Frame = 0
BLAST of Sed0008452 vs. TAIR 10
Match: AT1G02205.3 (Fatty acid hydroxylase superfamily ) HSP 1 Score: 48.9 bits (115), Expect = 7.5e-06 Identity = 46/146 (31.51%), Postives = 66/146 (45.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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