Sed0008392 (gene) Chayote v1

Overview
NameSed0008392
Typegene
OrganismSechium edule (Chayote v1)
DescriptionrRNA-processing protein like
LocationLG09: 36246527 .. 36258901 (-)
RNA-Seq ExpressionSed0008392
SyntenySed0008392
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTGCCCTAATTGTTCTAAACTTCAATCTCTCTGCAAAATTTTCTCTTCAACGATGAAGAACCGAACCGGAAAAGACGAAGATCAGAATCGGCCGAAATCGAAGTTCATGAAGAACAACAATAATCGCAAGAACATGAAACGATTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTTTGCGAATGCGAAATCGACTTCCGATTACTATAATCCGGCTTTGATACGTATGATTCTGCTGAAATTTTGCTTAATTTTGTTTCTTTTTGTCTTAATCGTCGATTAATAGCTCTTTAGTTTGTGTATTATTACTCGTTGATTGTTCTGTTAAATCTAGGTTTTGGGTTTTTGTTTCGTTGTGTTAGGGCTTGAAGTTTTGTTGTAAATCCAATATTATGTGAATTTTGGCTTACTTTTACTTCTTTTTGTTTTCGTTATCGATTAATAGCTCTTTGCTTTGTTTACTGTCACTCGTTGATTGTTCTGTTAAATCTTGGTTTTGGGTTTTTTTGTTTAGTTGTGTTAGGGCTCGAAGTTTTGTTGTAAATCCAATATTAGGGTCGAATCTAGTTTGAGGATTTGGTTTAGGGAATTGAAATATCATAGACTGGAAATATGTAAAAAATGAATGATTGACTGTCATATATGTCACTTTTGTTCAGAAAAGCAGAGAGAGTTCTATAAGAATGCTAAACATGTAAGCAAGTATAAGAAGTTTGTGAAGCATCAGAATCAGCCAAATGAAAGACCCTCTAGCTCAGTTGTTGGACTTGTTGAGGTATGTTATTATGATATTCTAAGTATCTGGTTCCCTAAAATTTCAATCATGTTTTCTTGACTTTCAATGCCTGGCGAGTCTTGGAATTAGGGGTGCACATGATCCGGATTGGATTGGCCAATCCTTCATATTAGAGTAACCCAACCCAATGGATTACACAGTTGTGTTTTTTTATCAAATATATATTTTTATGTATTAATTTACATACTTCAATTTCACAAAATACCATGGATTTAAAAAAAGGCATTTGAAATTTTTTTTTTTTTAAAAAAAAAACATTACACAGTAAAAGAAAGAAGAAAAAATGTCTACATTATAGACAAGCATTTCATTTGGAAAGAAGAAGAAAAAACCACCTTTAAATCCACCAAGCATAGAGAAGCATTTCATTTGGAAAATTAAAAAAAGAAAAAAAATTCAATTCGGTCCGGTTTAGGTTGACCCAGGACAAGGTTCCATTCCACTATATTCCAACTCTACCCAAACCGGGAATAAATCCAACCTAACCCTTGTATTTCGTGTTGGCTAATTCGGGTAGCTTGGGTTGCCGGTTCTCTTGTACACCCTTACTTGGAATGATATTGGAGAATATTTCGTAAGATTTTATGCTGTAAGTTTTTCTATTAAGAGAGTTTTTTTTTTTTTTTTTTGAGATAGGAAACAAATCTTTCATTGATGATTGGACAGCCTATCGAAACATTTATAAGAAACTATATGGTTAAGTCATAGCTACAAAAAGGGGAATAGAATGACACCAGACACCAACACAAAGCCATATAAATAATAGAATCAAGAAGCTATTAAGAGAGAGATGAGGCTTTATTTGTTGATTTTGATTTGCATTCAACCCAACTAGCATCTGTTTCGTTCAATTCTTGCTATCAAGAGAGAGAGAGGGGAGCTTTGTTTCTTTTTCTTTGTTGAAGTTATTTCAGGTACCTTTGGGCTATTTGTTGACTGTGATTCGGGTAGACATTGAACTCAACAACCATATGTTATATTTCGATTCTTATTACCAAGAGGAAGGGAACCATTGTTGGTTGGCTTAGTAGTCAAATAAGGGTCAGGTCTAGTAAAACATTAAAGTGCTTAGAGGTTTTGGGTTCAATCCGACCACCTACTTAAGAATTGATTTCCTACAAGTTACTTTGACAACCAAATGTAATGGGCCAGACAGGTGGCCTATGAGAACGGTGGAGGTGTGCATAAGCTGGTCTCGACACATCCAAAAGAAATTTATTAAGAGAAAGTGAGAGGGGCTTCGGTTTATAAGGCTTTTTTTAAGTGCCTTTTCACTTTGGGTATTCAAAAAGTCCAATCGAATCGAACTCTATCCAACTCATATGATCTTTTTTTTTTTTTTTTTAACAAACTCATATGATTTTAAGTTGCCTTTTAAACCTGTTTGAATTGAGTTGTTTTCATATAAAGTTTGAAGAAGAAGACTGGTTGGAAGAGACGTAGAAGAAAAGCCAGATAAAACTTCCCTTTCACAGAATAAAAATTTTAATGAAATTTCATCTGCTAACATTGCTGAACATGCAGCTAGTGCTTGCTGCATTTAATTTTTCTTCTCCATTTGTTTATATCTAATCTACTTTTACTAATTAGTCATTTAAGTTGATATTTATTTAATAATATTACACTATTTTGTTCACACATTAAAGTTCTAGTTTCCCTGCCATCTGTAATTGTTATATATTATGCTCTGAACTATTTGATTGGATCCTAAAGATATCTCAATCCAGTTCAACCCAACTTATAAACACCCCTATCTGTGACTATTTGTTGATTTTGATTTGGGGAGGCATCAAACCTAATGAGAGAGGACATTAATGTAATAACCCAAGGTTTTGTATTTGAAATAAGACTTATGGCACACTTGTAGTTAAGTTAAAGTTAAAGGGCATTTTGGTCAATTGTAAGGAGATATTTAAGCTTCTTTTGAGAACCCCAAATCCCTAAACCCATCATGCGTACTGTTCATCCGCCCCATCTGAGCAGCTGGTCGTTTCCGGTGAGTTGGGTTTCGTCGTCGGCATCTTCATGTGGGTTAGGGAGTTGCTCGTGAGTCTTCGCAGCAGCTCGAGCCCAACTTCCTCTCGAGCTCGTTGTCGCGGCTCGTGAGTCGCTGGTCGTATGCAGCGCAACCGTTCTTGCTTACATCGTCGCCGTTTGGGTTCGCCGGAGCCGTGGGAGTGTCTTTATGATCATGGGTCCGAGCACAAAGGCGTCGTTGTTGGTTCACACCGCGCCAGGAGCAGCGGCTCGAGGAAACGTGTGGGTTCGTGGCCGTCGCGGGTTCGAGGCGTCTTGAGCGATGTGGGTTTTTCTACTGCTTCGTCCGCGCGGGTCTTGGTACGTGGTGTGCGTCGCGAGTCACCGTGGAGCGATCGCCGTGTCCGCCGTCGGCTGGAGCTTGAGGGTGATAGTTCTTTCTCTCTTTTGCTTTCTTTTATTTTGAGTTAGGTTGAAAATGGTGGCTAAATGAGGAAGAAGATGGGTGTTTGGTAAATGGGTTTTGTTATTTAAGTTAGGTTAAGCCTATTCTAAGGTGGAATAGGGTTTGTTTGTTATGGGTTGGAGTTATTTAAATGATGAACAAGGATTGTTTGGCTACAAGGATTCTAGCTTGTTAAAGGAAGGTTTATGGATTGTTTGTTTAGGTTCAAACTCATCTATTTGATGGATTAGAATTTGTTTGGGTGTGAGTTTTAAAACCATTTTTAAGTTGGTATAAAGTTATTTAAGTTGAGAATAAGGATCGTTTGTTTGCAAGGTTGAGATTATTTGAGTTATGATTTAGTGATGTTTGGTTTCAAGTTTAAAGTTGTCTAAATCATGGATAATTGGTGTTTGTTTATTGGATTATGTTATTTAAAGCATTGGCTGAGCCTGTTTGGCTAGTAGTGTAATGTATGTTAGGTATCGAGTTTATGGGTTTTTGGCTTAGGTAAAATGATGGATTTTGACCCATTGACTTTTATTGACTTTTGTTGACTAGATTTGACCCGAGCTATTCTTCGTTCATCAAGTCGAGGTTGTGTAGCGTGTGAGTCACCAAGTGCCGCCGGGACACGTTTTTGAGGGCTCAGAATTTTATTTGGCTAGTTTGAGCTTCCAATGGATTCAAAGAGAGCTGTTAGTGGATTGGCCAAGGTAAGGGACCCGTTACCCCCTTCTCGAGGCCCGTGGCTATTACATGTGTTGGATTGACTGTATTCACTTACGTGTTTGATGTGGCATAATCTGTGTTGTTTGTGCTTGCATTGATTATATTGAGAGCATGCAACATCTGATTGATATCATGTTAAGGCAAGCATGTAGATTATGTTGATTATATGGCCATGCATGAACTACTGTATGTTGATTGATAGAGTCGGTCTCGCATGTGTCCTTATGTCCCATTGGGGGCTTGCATGATGTTTGATGCACGCTTGGTGCTTCGTTTGGGACGCAAACGAGACACGGAGACCGGATAGAGGATGCTAGTAAGCGGATGTGCATGGTTTGTGGCCGCACGTTCTCGATGGGGATTTGTGGTCCCTCGCCTTCGGGTTCCGTGGATGGTTGGCCCACCAGCTCACGGCCGCTCGGCATTTTACTAGTAGCCTAGGGTGCTCTCGGTATGTGGTTGGGTTTGTGGCCCTTTGGTGAGCGTCTTTGGATCCACCCTCACCGTGAGTATGAGACCTGTGGGATTTGTGGTCCCTTAGCTACTGAGCTTCTCTACTCGCAGGATCCCTCGGCCGAGCAGTATCCCCATTGCCTTAGAGATTTGTGGTCTCTATTGGCCTTTAGGTCTTTGGTTTGTGGCCTCAGATCGCTCTGCGTGGCGTGGATCTTGGACATGGTTCCTAACCCTTTTCGCCCCAGAGCTCGGGTTTTGTGGACCCCTTGATTATGTTGCTATCTTGCATGTTCGTGATGCTTTTGACTGATGCATGTCTTTACCCCGAGGTGGGAATCCTTCATCGAGTTGCAAAACTCACCCTTTCCTTCGTGGAATCCCACAGTACTACGAGATTGTATCGAGATGGGTGATCGGACGACGAGTGAAGATGACCATGGGACCCGCTGCATTATTCTGTTTAGAGTCGTCTAAATTTCTTCTTTCTGCATGAACTATTTAAGGGCGTGATAAATGGAACCTGTTTTATCGAGTTTTTATGTTTTGACTTTAGGGTACCCTAAGACTGTTTTAATGAATTTATCTCTTATAACCTTGTTCTTCCGAGTTGTTTTAAAGGAGTTTTGTTTTAAATTTACATGCCCGAGATTGCGAATACTATTTTCATGCATTGTGAGTTAAGGACTTAGGTTTAGACCCTAGATTGGGTTGGGTCCTTACAGTTGGTATCAGAGCTCAGAGTCATAGATTCTGTAGACTAGCTTACATCGTAGGCTGTTGTTTTGGTCCCCATGGTCTTCAGCCGTCGATCTCCATCAGGTAACTTGGTAGTGGATTAAGGATTTTAAAGCATGCTTAGTTATGATTAGCACTGTTTGTTTATTGTATGTTATTTCCTATTATCATACTTGCATGCTAACCCAAAGCTTTCGGTGGGGACTGAGATGTCCCTAAGTAGGTTGTAAACTGTTGAGATTCCTAGTAGAGATACTAGAAGTGATGTTAAAAGTGCAAGAGTTGTTGAGTAGAGTGAGCTTTAAGCTCAGGAGGTGCACCGATCCTTAGGTGCAGCCTAGAGTTGGAGCAATAGAGACATCCAGAGTTGTTGTGGACGATTGCAGTTGCAAGAGTTGAGCCGGAAGCTGAGTTATTGGCTGATTTGCATGCTAAGTAGCAGTTGAAGGTTGTTCTTCATATCGGGCAAAATGTTGCTTAGGTGTCTACGCCAGTTCCAGATGCTCAGGGTAGGCGCAGTGATGGAAATTGCAGAATTTTCAAGGATCTTATGAGAGTTTAGGAAGTGGGATCCGTACCACTTTGTTGGACTATCTAAAATCTCCTTAGTAGTTGAGGCGTGGTTGTCATTGTTCAGGATGATCTTCAACCCCCCAAGTTTGCATAGAAAGGCAGAAGATTCAACGTGATGTTCCACTTGAGAGTTTGAGAAGAAGGTCTGGTGACGGTCTATGCTGATTTTGACCTAAAGGGTTCGACCGTTTCAAAGTTTAGTGACCTTATAGAGTGGTTCTCAGTTGGCTTGCCAAATGTTGATAAGCAGAGGGTGTCAGTTCAGTTCTCCTTCTTTCAGTAGGGGAATGATGCAGTGTCAGTTTATGTAACTAATTGGACTTGCAAGTTTTTCCAAGGAGCTCACTCATGTTGTTTGGCAAGAGAGAAAGTTGAGACTACCAAATCATCTAGGTTTGGGAGTCAGCAGCAAGTTTAAAGATTCGATGGGTTTGAGGTCAAGCCAGTTGGAGGGCTGTGTTTGGCGAATCGTTAGATGCCGTCCCAGGTTGCCTCTAAGTATGTTTTATCCAATTCTTGGTTTGGAGGTGGTTGTCAGAGAACCATGTTGTGATTGCTAGCAGTGTAAGGAAGTGTTCTTTAGGCATCTCAGAAGGCTGAGCTGTTAGCTCAAAAGCAGGAAGTAAGAGAGAGTCTTTCGTCGATTTCGACCAAGAAGGTAAGGAAGCAGTTAGCTAAGGAAGTGTGGGATTTATTACATCAGTATTAGAAGTATGAAGTTTTGAGTGAAATTTGTTAGTTCGGTTCGGTGGTGATAAAGTTCGCCGATGTATATCTTGTGGATCTGACAAGATTGCCTCCGCCCCGAGTAGTGCTCTTTTAAGTCAAGCTTGTGCTAGGGAATGACCCCATCTCAAGGTTTTGTTTGTGATGCCCTCGGTAGGGTTAAAATAACTTGAAGGTTCAGTTGCAGGAATTAGTTGATAGTGGTTTCGTCCGTCCAAGTGTGTCATTGTGGGAGCACTTAGGCTGCTTCTTAAGGAGAAAGATGGACCTATGAGCTTTGTGTTGGCTATGTAAAGCTTGTTAAGGTATCAGTTGAGTTCAGATACTCATTCGATCAACATCAGTGCGTCATAGTGGTTATCCAGATTGTTTGGTTGTGGTTTCCATCAATTGAGGATCAAGGAAGAGACGTCTCTAAGACAACTTTTAGATCTTGCTTCGGTCACTGGTATTTCTTAGTGATGTCAATTGAATTGTCAATTGTCGTGCAACGGTTATGGGCATGATGGATAGAGTATTAAGGATTTTTTGAGCAAGTATGTGTTCGCATTATGATCGATATCTTGGTTTGCTAAGTTATAGTCGGATCACGAGGAGTTGACATGAGTTTTGTTAGCACTTCGGGAAAGTGGTTTGTTTGCTAAGTTTCTAAATGTGAGTTTTGGTTGATTCAATGGCCTTCTTTAAGGCCATGTGATTTCTCGTTAAGGAATTTCAGTGGATCTTATTGTGACCAATGCAGTGAGCAGTTAGAACCAGGTTGACATCAGTTGTAGAGGACCAATGACACAGTTCGCCAGAGAGAGCCGGGCGTTGTGTGATCGATTGAGTGCGAGAGGCGATTCGAGATTTTGAGAAGATGTTTGATTTCGGCACCATTTGGTGATGACGAGAGGTTAGAGGATTGTGGCTTGCAGTGATGCTTCTAAGAAGGTCTGTGTTGTGCCCTTGCTGAGATAGAGAATAGTACTAGCGTGTGGGCCCGACAGCTTAAGTCGTATGAGCAGATCTTTGATTCACGTCCTGAAGTTAGCATTTGTGGTATATGCTTGGAGATCCTACATGCGTTGCGTGTTCAGAGAGAAGTTGTAGTTTTCGTGGTTCCTAAGAGATTTAAAGTATTGTTTCATCCGAATGATTTGTTTTGAGGTAGCACTGGTTGTTTAAGCTTGTAAGACTATGATTGCGAGGTTCCTTACCACCATGGTAAAGATCTTGTGGTTGCTCTTGCACTAGGTAGAGAAGTTCATTTTTAGTGGAGTTTGTTGTTTCTCTGTTGTTAGGGCCTTGTCTCGACCGAGAAAAAGTGGTGTTGATTGAAAAAGACGTTAGTTTAGTTATCAGTGCGGTTGTTGTGAGGCCGAGATTTGTAGCCAGTCAGTTACAAGCGAGATTGCAGTCGGGAGAGCACACTCAGATATATGTTGCTTCTATTGTGAGTGGCAGCTCAGTTAGAAACTCAGTATGTCTGTTGATGTTGAAATTAGGCCCAGGTTCTTGTTAGATGTGTATAGTTCGTCGTTTTCTTGGCACCTCGAGGTTACCAAGAGTTATGGAGGTCAAAGGATTCTGTGACTATGGATTATCGAGCAGCGAGATTGTTGGAGTTCCAGTTTGGGGTTGAATTTTTAGCAGGTGAGTTTACTTGGTTGTTGCAGCCCCTTAGTTCTCAGAGTGAAAGTGGAACGAGGTCTCTATGAGTTTCATTTCAAGACTTTCTAGGACGCTGAGAGGTTTCACCATGATATTGGCGATTGTGGATCGACTTACCAGTAGCGCAATTTATTCCAGGAAAGCTGGATTGTTCTGTTGAGAAGTGAGCATAGTTTTACTTGAGAAGGATTTTCAAGTAGCATGGGGTTCCTGGCAGTATCGTTGTAGAAAGAGGCATTCAGTCCACTTCACACTTTTGGGAGAGCCTTCAGGAAGGCAGTGAAACTACCTGTAAGTTCAGTGCAACTTTTCATCTGTAGAAAGATGATCAGGCCGAGGGAGTCAGTAAGATCTTAGAGGATATGTTGAGTTCCGTTGAGTTTTTCTCTCTATGCGGATGAGACAAGTGGATGTATCTGAGGGAGTTTGCTTGTACCAGTTATCAGTCCATTGTTCAGTTGGTACTGTTTGAGGCACTGTTTGAAAAGTGGTAGATCTCCTGTCCCTTGGGATGAAGTTGAAGAAAGAATGTTGTTAGGGTCTGAGTTGTTGTAGTGCCAAGTGATGCAGTTCATGAGATCCATGCTAGAATGATTATAGCTCGGGGCCGTTAGAAAAGTTGTGCAGACGTTTGTCGCAGAAATATAAAACTTGAGATTAGCAGGATTGTGTTTTAAAAGTGGCATCGTTGTGGGGAATGCAGAGTTTTGAGGTAATAGAGAGCTGAGCCTGAGTGGTTTGCTCGCTTGTAATTTCTTGAGTGAGTTAGTGCAGTATTGTGTCGTTCGGTTGTTTAGTTGGTGTTGCATTAATGCGATGTTAACTATGCCTTTGTCATTGCATGTTTCATTGTTTCATCAAGTATGGGCTAGGCTTGTTCCATGTTGATCATGAGCCTTTGGGGTTAAATGAGATCTTAGCTTTTGAAGAGAAACTTGTTGAGATTTTGAGACCGAGATTGTAAAGTATGAGGATTAGTGAGTGCTTTCGTTAAAGTATCGTTGAGGTGGTTATGCACTCTTGTTGTTTTGGGTTATTTGAGCCTTAGTCAACTTTCGAGGACGAAAGTTTTCTAAGGGGGGAATATTGTAATAACCCAAGGTTTTGTATTTGAAATAAGACTTATGGCACACTTGTAGTTAAGTTAAAGTTAAAGGGCATTTTGGTCAATTGTAAGGAGATATTTAAGCTTCTTTTGAGAACCCCAAATCCCTAAACCCATCATGCGCATCTTGTTCATCCGCCCCATCCGAGCGGTGGTCGTTTAGGTGAGTTGGGTTTCGTCGTCGGCATCTTCATGTGGGTTAGGAGTTGCTCGTGAGTCTTCGCAGCAGCCTCGAGCCCAACTTCCTCCCGAGCTCGTTGTCGCGGCTCGTGAGTCATTGGTCGTATGCTGCGCCGCAACCGCTTGCTTACATCGTCGCCGTTTGGGTTCGCGGAGCCGTGGGAGTGTCTTCTGATAGCCATGGTCCGAGCACAAGGCGTCGTTGTTGGTTCCGTCACACGAGGAGCGGCTCGAGGAAACGTGTGGGTTCGTGGCCGTCGCGGGTTCGAGGCGTCTTGAGCGATGTGGGTTTTTTTACTGTTTTCGGTCCGCGCGGATCTTGGCCGTGTGTGCGTCGCGAGTCATCAGTGGAGCGATCGCCGTGTCCGCCGTCGCTGGAGCTTGAGGGTGATAGTTCTTTCTCTCTTTTGCTTTCTTTTATTTTGAGTTAGGTTGAAAATGGTGGCTAAATGAGGAAGAAGATGGGTGTTTGGTAAATGGGTTTTGTTATTTAAGTTGGGTTAAGCCTATTCTAAGGTGGAATAGAAATTTATTTGTTATGGGTTGGAGTTATTTAAATGATGAACAAGGATTGTTTGGCTACAAGGATTCTAGCTTGTTAAAGGAAGGTTTATGGATTGTTTGTTTAGGTTCAAACTCATCTATTTGATGGATTAAGGATTTGTTTGGGTGTGAGTTTTAAAACCATTTTTAAGTTGGTATAAAGTTATTTAAGTTGAGAATAAGGATCGTTTGTTTGCAAGGTTGAGATTATTTGAGTTATGATTTAGTGATGTTTGGTTTCAAGTTTAAAGTTGTCTAAATCATGGATAATTGGTGTTTGTTTATTGGATTATGTTATTTAAAGCATTGGTGAGCTGTTTGGCTAGTAGTGTAATGTATGTTCTGGTGATCGAGTTTATGGGTTTTTGGCTTAGGTAAAATGATGGATTTTGACCCATTGACTTTTATTGACTTTTGTTGACTAGATTTGACCCGAGCTATTCTTCGTTCATCAAGTCGAGGTTGTGTAGCGTGTGAGTCACCAAGTGCCGCCGGGACACGTTTTTTGAGGGCTCAGAATTTTATTTGGCTAGTTTGAGCTTCCAATGGATTCAAAGAGAGCTGTTAGTGGATTGGCCAAGGTAAGGGACCCGTTACCCCCTTCTCGAGGCCCGTGGCTATTACATGTGTTGGATTGACTGTATTCACTTACGTGTTTGATGTGGCATAATCTGTGTTGTTTGTGCTTGCATTGATTATATTGAGAGCATGCAACATCTGATTGATATCATGTTAAGGCAAGCATGTAGATTATGTTGATTATATGGCCATGCATGAACTACTGTATGTTGATTGATAGAGTCGGTCTCGCATGACAGTCCTTATGTCCCATTGGGGGCTTGCATGATGTTTGATGCACGGCTTGGTGCTTCGTTTGGACGCAAACGAGACACGGAGACCGGATAGAGGATGCTAGTAAGCGGATGTGCATGGTTTGTGGCCGGCACGTTCTCGATGGGGGATTTGTGGTCCCTCGCCTTCGGGTTCCCGTGGATGGTTGGCCCACCAGGCTCACGGCCCTGTCGGCATTTTACTAGTAGCCTAGGGTGCTCTCCAGGTATGTGGTTGGGTTTGTGGCCCTTTGGTGAGCGTCTTTGGATCCACCCTCACCGTGAGTATGAGACTGTGGGATTTGTGGTCCCTTAGCTACTGTGCTTCTCTACTCGCAGGATCCCTCGGCTGGAGCAGTATCCCATTGCCTTAGAGATTTGTGGTCTCTATTGGCCTTTAGGTCTTTGGTTTGTGGCCTCAGACCGCTCTGCGTGGCGTGGATCTTGGACATGGTTCCTAACCCTTTTCGCCCAGGAGCTCGGGTTTTGTGGACCCCTTGATTATGTTGCTATCTTGCATGTTCGTGATGCTTTTGACCTGATGCATGTCTTTACCCCGAGGTGGGGAATCCTTACTGAGTTGCAAAACTCACCCTTTCCACCGTGGAATCCACGGGTGTACTACGAGATTGTATCGAGATGGGTGATCGGACGAGTGAAGATGACCATGGGACCCATTGCATTATTCTGCATTTAGAGTCGTCTAAATTTCTTCTTTCTGCATGAACTATTTAAGGGCGTGATAAATGGAACCTGTTTTATCGAGTTTTTATGTTTTGACTTTAGGGTACCCTAAGACTGTTTTAATGAATTTATCTCTTATAACCTTGTTCTTCCGAGTTGTTTTAAAGGAGTTTTGTTTTAAATTTACATGCCCGAGATTGCGAATACTATTTTCATGCATTGTGAGTTAAGGACTTAGGTTTAGACCCTAGATTGGGTTGGGTCCTTACAATTAATTTGTAGACACCTCCCGTGTCTCCATTCCTTTGATATCTCCTGGTTACTATGGACGGATGTGGTTATCCCGGTATAGTGGAGCGAAACTCCAAAAAATAACCCATTGAGCATCTGTTTTCACTCCCTTCTTGCTATAAAAAGAATCTATTGTGTATCTGCTGGTGGAACCATTGACTGACTCATAATTCTTGCTGACTCTTAAAGGATGAAAATGAAACAAAATCCGAGAACCAGACGAACCGAAGACATGGGAATGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTACGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCGAAGAAGGAAGAACAAGAAAAGGCCAAAGCTAGACGAAACTCGACGAGGGAAAAAATGTTCAAAAGGACTAAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGGAAACCATTGGAGCCTCCGTGCACCACTGAGGCTTTTGTTGTTTTGACTGAAACTTTGTGAAAGAAAATTTTGGCGCTTGTATAATATTAATATATATCTTTGTACTTTTTAGTTTGCTTCTCTCTGTACAATCAAATTTGAATGTAGTAAAATAATCTTAAATGATATATATGCTTGATATTGACTTTTTGCCGC

mRNA sequence

GTTTTGCCCTAATTGTTCTAAACTTCAATCTCTCTGCAAAATTTTCTCTTCAACGATGAAGAACCGAACCGGAAAAGACGAAGATCAGAATCGGCCGAAATCGAAGTTCATGAAGAACAACAATAATCGCAAGAACATGAAACGATTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTTTGCGAATGCGAAATCGACTTCCGATTACTATAATCCGGCTTTGATACAAAAGCAGAGAGAGTTCTATAAGAATGCTAAACATGTAAGCAAGTATAAGAAGTTTGTGAAGCATCAGAATCAGCCAAATGAAAGACCCTCTAGCTCAGTTGTTGGACTTGTTGAGGATGAAAATGAAACAAAATCCGAGAACCAGACGAACCGAAGACATGGGAATGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTACGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCGAAGAAGGAAGAACAAGAAAAGGCCAAAGCTAGACGAAACTCGACGAGGGAAAAAATGTTCAAAAGGACTAAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGGAAACCATTGGAGCCTCCGTGCACCACTGAGGCTTTTGTTGTTTTGACTGAAACTTTGTGAAAGAAAATTTTGGCGCTTGTATAATATTAATATATATCTTTGTACTTTTTAGTTTGCTTCTCTCTGTACAATCAAATTTGAATGTAGTAAAATAATCTTAAATGATATATATGCTTGATATTGACTTTTTGCCGC

Coding sequence (CDS)

ATGAAGAACCGAACCGGAAAAGACGAAGATCAGAATCGGCCGAAATCGAAGTTCATGAAGAACAACAATAATCGCAAGAACATGAAACGATTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTTTGCGAATGCGAAATCGACTTCCGATTACTATAATCCGGCTTTGATACAAAAGCAGAGAGAGTTCTATAAGAATGCTAAACATGTAAGCAAGTATAAGAAGTTTGTGAAGCATCAGAATCAGCCAAATGAAAGACCCTCTAGCTCAGTTGTTGGACTTGTTGAGGATGAAAATGAAACAAAATCCGAGAACCAGACGAACCGAAGACATGGGAATGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTACGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCGAAGAAGGAAGAACAAGAAAAGGCCAAAGCTAGACGAAACTCGACGAGGGAAAAAATGTTCAAAAGGACTAAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGGAAACCATTGGAGCCTCCGTGCACCACTGA

Protein sequence

MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETIGASVHH
Homology
[Close]
BLAST of Sed0008392 vs. NCBI nr
Match: XP_038876713.1 (uncharacterized protein LOC120069103 [Benincasa hispida])

HSP 1 Score: 293.9 bits (751), Expect = 1.0e-75
Identity = 166/193 (86.01%), Postives = 176/193 (91.19%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MKN TGKDEDQNR  SKFMK+  + KNMKRLGGKGLSLEAFANAKST+DYYNPALI+KQR
Sbjct: 1   MKNPTGKDEDQNRSNSKFMKSKKH-KNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHVSKYKK VK+QNQ NERPSSS VGLVEDENETK EN TN R G ERNKGVPS
Sbjct: 61  EFYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQ LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETI-GASVHH 193
           HLLETI GAS+ H
Sbjct: 181 HLLETIGGASMKH 192

[Close]
BLAST of Sed0008392 vs. NCBI nr
Match: XP_022960530.1 (uncharacterized protein LOC111461241 [Cucurbita moschata])

HSP 1 Score: 292.0 bits (746), Expect = 3.8e-75
Identity = 163/192 (84.90%), Postives = 175/192 (91.15%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MKNR GKDE+Q R KSKFMK N + KNMKRLGGKG S +AFANAKST+DYYNPALI+KQR
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKH-KNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHV+KYKK VKHQN  NERPSSS VGLVE ENE K EN+TN R GNERNKGVPS
Sbjct: 61  EFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMKFENKTNGRRGNERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVHH 193
           HLLETIGAS++H
Sbjct: 181 HLLETIGASMNH 191

[Close]
BLAST of Sed0008392 vs. NCBI nr
Match: KAG6593160.1 (hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025559.1 hypothetical protein SDJN02_12055 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291.6 bits (745), Expect = 5.0e-75
Identity = 163/192 (84.90%), Postives = 174/192 (90.62%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MKNR GKDE+Q R KSKFMK N + KNMKRLGGKG S +AFANAKST+DYYNPALI+KQR
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKH-KNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHV+KYKK VKHQN  NERPSSS VGLVE ENE   ENQTN R GNERNKGVPS
Sbjct: 61  EFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMNFENQTNGRRGNERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVHH 193
           HLLETIGAS++H
Sbjct: 181 HLLETIGASMNH 191

[Close]
BLAST of Sed0008392 vs. NCBI nr
Match: XP_004136058.2 (uncharacterized protein LOC101216293 [Cucumis sativus] >KGN44879.1 hypothetical protein Csa_016715 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 1.5e-74
Identity = 162/192 (84.38%), Postives = 172/192 (89.58%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MK+  GK E  NR KSKFM NNN   N+KRLGGKGLSLEAFANAKST+DYYNPALI+KQR
Sbjct: 1   MKHSNGKHEHNNRSKSKFM-NNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHV+KYKK VKHQNQPNERPSSS V LVE ENETK ENQTN R G ERNKGVPS
Sbjct: 61  EFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVHH 193
           HLLETIGAS +H
Sbjct: 181 HLLETIGASTNH 191

[Close]
BLAST of Sed0008392 vs. NCBI nr
Match: XP_023513566.1 (uncharacterized protein LOC111778133 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.9 bits (738), Expect = 3.2e-74
Identity = 162/192 (84.38%), Postives = 173/192 (90.10%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MKNR GKDE+Q   KSKFMK N + KNMKRLGGKG S +AFANAKST+DYYNPALI+KQR
Sbjct: 1   MKNRAGKDEEQTCSKSKFMKANKH-KNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHV+KYKK VKHQN  NERPSSS +GLVE ENE K ENQTN R GNERNKGVPS
Sbjct: 61  EFYKNAKHVNKYKKLVKHQNNQNERPSSSTLGLVEGENEMKFENQTNGRRGNERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQGLYERKHQEKEKAR EKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQGLYERKHQEKEKARKEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVHH 193
           HLLETIGASV+H
Sbjct: 181 HLLETIGASVNH 191

[Close]
BLAST of Sed0008392 vs. ExPASy TrEMBL
Match: A0A6J1H9B9 (uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC111461241 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.9e-75
Identity = 163/192 (84.90%), Postives = 175/192 (91.15%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MKNR GKDE+Q R KSKFMK N + KNMKRLGGKG S +AFANAKST+DYYNPALI+KQR
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKH-KNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHV+KYKK VKHQN  NERPSSS VGLVE ENE K EN+TN R GNERNKGVPS
Sbjct: 61  EFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMKFENKTNGRRGNERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVHH 193
           HLLETIGAS++H
Sbjct: 181 HLLETIGASMNH 191

[Close]
BLAST of Sed0008392 vs. ExPASy TrEMBL
Match: A0A0A0K7L3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.1e-75
Identity = 162/192 (84.38%), Postives = 172/192 (89.58%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MK+  GK E  NR KSKFM NNN   N+KRLGGKGLSLEAFANAKST+DYYNPALI+KQR
Sbjct: 1   MKHSNGKHEHNNRSKSKFM-NNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHV+KYKK VKHQNQPNERPSSS V LVE ENETK ENQTN R G ERNKGVPS
Sbjct: 61  EFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVHH 193
           HLLETIGAS +H
Sbjct: 181 HLLETIGASTNH 191

[Close]
BLAST of Sed0008392 vs. ExPASy TrEMBL
Match: A0A6J1KV89 (uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.1e-74
Identity = 160/192 (83.33%), Postives = 173/192 (90.10%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MKNR GKDE+Q R KSKF K N + KNMKRLGGKG S +AFANAKST+DYYNPA I+KQR
Sbjct: 1   MKNRAGKDEEQTRSKSKFTKGNKH-KNMKRLGGKGPSPQAFANAKSTTDYYNPAFIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHV+KYKK VKHQN  NERPS+S VGLVE ENE K EN+TN R GNERNKGVPS
Sbjct: 61  EFYKNAKHVNKYKKLVKHQNNQNERPSNSTVGLVEGENEMKFENRTNGRRGNERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVHH 193
           HLLETIGAS++H
Sbjct: 181 HLLETIGASMNH 191

[Close]
BLAST of Sed0008392 vs. ExPASy TrEMBL
Match: A0A1S3BRH3 (uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.6e-74
Identity = 161/192 (83.85%), Postives = 171/192 (89.06%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MKN  GK E +NR KSKFM N N   N+KRLGGK LSLEAFANAKST+DYYNPALI+KQR
Sbjct: 1   MKNPNGKHEHKNRSKSKFM-NTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHV+KYKK VKHQNQ NERPSSS VGLVE ENETK ENQTN R G ERNKGVPS
Sbjct: 61  EFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRT+KGQPVMKYRIE
Sbjct: 121 LQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVHH 193
           HLLETIGAS +H
Sbjct: 181 HLLETIGASTNH 191

[Close]
BLAST of Sed0008392 vs. ExPASy TrEMBL
Match: A0A6J1GP14 (uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC111455827 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.8e-74
Identity = 160/191 (83.77%), Postives = 172/191 (90.05%), Query Frame = 0 

Query: 1   MKNRTGKDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQR 60
           MK RTG+DE QNRPKS FMKN  + KNMKRLGGKGLSLEAFAN KST+DYYNPALI+KQR
Sbjct: 1   MKKRTGEDEVQNRPKSAFMKNKKH-KNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQR 60

Query: 61  EFYKNAKHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPS 120
           EFYKNAKHVSKYKK VKHQN  NERPSSS VGLVE EN TK ENQTN R G ERNKG+PS
Sbjct: 61  EFYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPS 120

Query: 121 LQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIE 180
           LQ LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKM KRT+KGQPVMKYRIE
Sbjct: 121 LQELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIE 180

Query: 181 HLLETIGASVH 192
           HLL+TIGAS++
Sbjct: 181 HLLKTIGASMN 190

[Close]
BLAST of Sed0008392 vs. TAIR 10
Match: AT4G03180.1 (CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink). )

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-32
Identity = 83/183 (45.36%), Postives = 125/183 (68.31%), Query Frame = 0 

Query: 7   KDEDQNRPKSKFMKNNNNRKNMKRLGGKGLSLEAFANAKSTSDYYNPALIQKQREFYKNA 66
           ++ D    KSK       RKNM+RLGG GLSL+ FAN KS ++ YNP+LI+KQ+EFYKNA
Sbjct: 6   QNADHETDKSK-SAETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFYKNA 65

Query: 67  KHVSKYKKFVKHQNQPNERPSSSVVGLVEDENETKSENQTNRRHGNERNKGVPSLQGLYE 126
           K+VSK++K +K QN P++  +     + +D+++ K + ++N+R G         ++ LY+
Sbjct: 66  KYVSKFRKSLKQQNIPDKNETGETSKVGDDDDDDKRKGKSNKRIG---------VEDLYK 125

Query: 127 RKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTKKGQPVMKYRIEHLLETI 186
           +  +E E+ R E+EA+  AKKE +E+A++RR   + KM ++T+ GQPVMKYRIEHLLE+I
Sbjct: 126 QTREEMERVRKEREAMFQAKKEAKEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLESI 178

Query: 187 GAS 190
             S
Sbjct: 186 KKS 178

The following BLAST results are available for this feature:
BLAST of Sed0008392 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876713.11.0e-7586.01uncharacterized protein LOC120069103 [Benincasa hispida][more]
XP_022960530.13.8e-7584.90uncharacterized protein LOC111461241 [Cucurbita moschata][more]
KAG6593160.15.0e-7584.90hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_004136058.21.5e-7484.38uncharacterized protein LOC101216293 [Cucumis sativus] >KGN44879.1 hypothetical ... [more]
XP_023513566.13.2e-7484.38uncharacterized protein LOC111778133 [Cucurbita pepo subsp. pepo][more]
BLAST of Sed0008392 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0008392 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H9B91.9e-7584.90uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC1114612... [more]
A0A0A0K7L37.1e-7584.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1[more]
A0A6J1KV892.1e-7483.33uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895... [more]
A0A1S3BRH34.6e-7483.85uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=... [more]
A0A6J1GP147.8e-7483.77uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC1114558... [more]
BLAST of Sed0008392 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G03180.13.3e-3245.36CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast ... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..172
IPR013730Fyv7/TAP26PFAMPF08524rRNA_processingcoord: 56..186
e-value: 2.8E-13
score: 50.1
IPR013730Fyv7/TAP26PANTHERPTHR15657UNCHARACTERIZEDcoord: 1..189

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008392.1Sed0008392.1mRNA