Homology
BLAST of Sed0008302 vs. NCBI nr
Match:
XP_023548504.1 (DNA mismatch repair protein PMS1 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1497.6 bits (3876), Expect = 0.0e+00
Identity = 782/926 (84.45%), Postives = 845/926 (91.25%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MD GI +DSPTIKPINKG+VHRICSGQVILDLSSAVKELVENSLDAGAT +EISLKDYGE
Sbjct: 1 MDVGIAVDSPTIKPINKGIVHRICSGQVILDLSSAVKELVENSLDAGATSVEISLKDYGE 60
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLAL+HHTSKLSDFPDLQSL TYGFRGEALSSLCSLGNLT+E
Sbjct: 61 EWFQVIDNGSGISPTNFRVLALRHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVE 120
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRTK ESVATHLT+DHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 121 TRTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNSAGKN KS+VFKTQGSG IKDNIITVFGM TFNCLESVS
Sbjct: 181 LISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVS 240
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SD+CKVEGFVSKSG GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI
Sbjct: 241 ILLSDECKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AIMNFTLPSK+CDVNV PDKRKIFF+DETHILQ LREELLKIYSPINAC+SVNKVEEPTK
Sbjct: 301 AIMNFTLPSKACDVNVTPDKRKIFFSDETHILQRLREELLKIYSPINACYSVNKVEEPTK 360
Query: 361 QVDSLE-HSDHEKLSMLSD-FSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDS+E SD KLSML + FS D G +D SH++LADNDDSL+++EN+E+SS +IEV+
Sbjct: 361 QVDSVELCSDKRKLSMLVEHFSSDEGKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVV 420
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
NSDGEEN+ R+DF+LRVHGMKKADA D DQH KT S+KG+ ++PSSPC+TV+G+DT
Sbjct: 421 NSDGEENITRKDFSLRVHGMKKADAFLKDYDQHKKTCFSSKKGEQIFPSSPCVTVTGTDT 480
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+ NKRKYETLSAPLSEVPILRNQF N+Q KK A++ SKDVKCTHG
Sbjct: 481 SRVQSSLDKFVTKNKRKYETLSAPLSEVPILRNQFLNDQWKKISADNP---SKDVKCTHG 540
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETT-QECTEEGIAKVP-P 600
D QV +DF EGNDEDSSIQ TDRVF+E+G+P SS DHS D ETT +ECTEE IAKVP
Sbjct: 541 DCQVFDDFSEGNDEDSSIQTNTDRVFNELGIPLSSADHSDDGETTEEECTEEAIAKVPHS 600
Query: 601 VIESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQ 660
VIEST TP KDL+ M DLP S+S + PS MK SSSP QL+LCSTFHFDF EL+KRR+Q
Sbjct: 601 VIESTGTPIKDLE-MSEDLPLSDSSVLPSGFMKESSSP-QLKLCSTFHFDFHELKKRRMQ 660
Query: 661 RQLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRM 720
RQLR+KLNGY CE++KLK HYAAATL LSQPDNEDRKARA+EAAAKEL+RLFRKEDFSRM
Sbjct: 661 RQLRYKLNGYICERKKLKCHYAAATLKLSQPDNEDRKARALEAAAKELDRLFRKEDFSRM 720
Query: 721 KVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 780
KV+GQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE
Sbjct: 721 KVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 780
Query: 781 VVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGE 840
VVVSIHMDVIRKNGF LEEDPHALPGNRF+LKAVPFSKNITFGVEDVKDLISTLADSEGE
Sbjct: 781 VVVSIHMDVIRKNGFVLEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGE 840
Query: 841 CSIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNC 900
CSI+GSYRMDTA+SVCPSRVRAMLASRACRSSV IGDPLG EMQKI+EHLA LKSPWNC
Sbjct: 841 CSIIGSYRMDTANSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKIVEHLAELKSPWNC 900
Query: 901 PHGRPTMRHLVDLTTIKRLDESDADC 919
PHGRPTMRHLVDLTTIKR DE++ADC
Sbjct: 901 PHGRPTMRHLVDLTTIKRSDENNADC 921
BLAST of Sed0008302 vs. NCBI nr
Match:
XP_022954392.1 (DNA mismatch repair protein PMS1 isoform X2 [Cucurbita moschata])
HSP 1 Score: 1492.6 bits (3863), Expect = 0.0e+00
Identity = 780/925 (84.32%), Postives = 840/925 (90.81%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MD GI +DSP+IKPINKG+VHRICSGQVILDLSSAVKELVENSLDAGAT +EISLKDYGE
Sbjct: 1 MDVGIAVDSPSIKPINKGIVHRICSGQVILDLSSAVKELVENSLDAGATSVEISLKDYGE 60
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLAL+HHTSKLSDFPDLQSL TYGFRGEALSSLCSLGNLT+E
Sbjct: 61 EWFQVIDNGSGISPTNFRVLALRHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVE 120
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRTK ESVATHLT+DHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 121 TRTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNSAGKN KS+VFKTQGSG IKDNIITVFGM TFNCLESVS
Sbjct: 181 LISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVS 240
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SDDCKVEGFVSKSG GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI
Sbjct: 241 ILLSDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AIMNFTLPSK+CDVNV PDKRKIFF+DETHILQ LREELLKIYSPINACFSVNKVEEPTK
Sbjct: 301 AIMNFTLPSKACDVNVTPDKRKIFFSDETHILQRLREELLKIYSPINACFSVNKVEEPTK 360
Query: 361 QVDSLE-HSDHEKLSMLSD-FSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDS+E SD KLSML + FSPD G +D SH++LADNDDSL+++EN+E+SS +IEV+
Sbjct: 361 QVDSVELCSDKRKLSMLVEHFSPDEGKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVV 420
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
+SDGEEN+ R+DF LRVHGMKKADA D DQH KT S+KG+ + PSSPC+TV+G++T
Sbjct: 421 SSDGEENITRKDFALRVHGMKKADAFLKDYDQHKKTCFSSKKGEQITPSSPCVTVTGTNT 480
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+ NKRKYETLSAPLSEVPILRNQF NNQ KK A++ SKDVKCTHG
Sbjct: 481 SRVQSSLDKFVTTNKRKYETLSAPLSEVPILRNQFLNNQWKKISADNP---SKDVKCTHG 540
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETTQECTEEGIAKVP-PV 600
+ QV +DF EGNDEDSSIQ TDRVF+E+G+P SS DHS D ETT+ECTEE IAKVP V
Sbjct: 541 NCQVFDDFSEGNDEDSSIQTNTDRVFNELGIPLSSADHSDDGETTEECTEEAIAKVPHSV 600
Query: 601 IESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQR 660
IEST TP KDL+ M DLP S+S + PS MK SSSP QL+LCST HFDF EL+KRR QR
Sbjct: 601 IESTGTPIKDLE-MSEDLPLSDSSVLPSGFMKESSSP-QLKLCSTCHFDFHELKKRRTQR 660
Query: 661 QLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRMK 720
QLR KLNGY CE++KLK HYAAATL LSQPDNEDRKARA+EAAAKEL+RLFRKEDFSRMK
Sbjct: 661 QLRDKLNGYICERKKLKCHYAAATLKLSQPDNEDRKARALEAAAKELDRLFRKEDFSRMK 720
Query: 721 VIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
V+GQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV
Sbjct: 721 VVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
Query: 781 VVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
VVSIHMDVIRKNGF LEEDPHALPGNRF+LKAVPFSKNITFGVEDVKDLISTLADSEGEC
Sbjct: 781 VVSIHMDVIRKNGFVLEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
Query: 841 SIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNCP 900
SI+GSYRMDTA+SVCPSRVRAMLASRACRSSV IGDPLG EMQKI+EHLA LKSPWNCP
Sbjct: 841 SIIGSYRMDTANSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKIVEHLAELKSPWNCP 900
Query: 901 HGRPTMRHLVDLTTIKRLDESDADC 919
HGRPTMRHLVDLTTIKR DE++ DC
Sbjct: 901 HGRPTMRHLVDLTTIKRSDENNPDC 920
BLAST of Sed0008302 vs. NCBI nr
Match:
KAG6575837.1 (ATPase family AAA domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1488.0 bits (3851), Expect = 0.0e+00
Identity = 781/926 (84.34%), Postives = 838/926 (90.50%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MD GI +DSPTIKPINKG+VHRICSGQVILDLSSAVKELVENSLDAGAT +EISLKDYGE
Sbjct: 1541 MDVGIAVDSPTIKPINKGIVHRICSGQVILDLSSAVKELVENSLDAGATSVEISLKDYGE 1600
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLAL+HHTSKLSDFPDLQSL TYGFRGEALSSLCSLGNLT+E
Sbjct: 1601 EWFQVIDNGSGISPTNFRVLALRHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVE 1660
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRTK ESVATHLT+DHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 1661 TRTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 1720
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNSAGKN KS+VFKTQGSG IKDNIITVFGM TFNCLESVS
Sbjct: 1721 LISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVS 1780
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SDDCKVEGFVSKSG GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI
Sbjct: 1781 ILLSDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 1840
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AIMNFTLPSK+CDVNV PDKRKIFF+DETHILQ LREELLKIYSPINAC+SVNKVEEPTK
Sbjct: 1841 AIMNFTLPSKACDVNVTPDKRKIFFSDETHILQRLREELLKIYSPINACYSVNKVEEPTK 1900
Query: 361 QVDSLE-HSDHEKLSMLSD-FSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDS+E SD KLSML + FSPD G +D SH++LADNDDSL+++EN+E+SS +IEV
Sbjct: 1901 QVDSVELCSDKRKLSMLVEHFSPDEGKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVE 1960
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
NSDGEEN+ R+DF LRVHGMKKADA D DQH KT S+K + + PSSPC+TV+G+ T
Sbjct: 1961 NSDGEENITRKDFALRVHGMKKADAFLKDYDQHRKTCFSSKKCEQITPSSPCVTVTGTGT 2020
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+ NKRKYETLSAPLSEVPILRNQF NNQ KK A++ SKDVKC HG
Sbjct: 2021 SRVQSSLDKFVTKNKRKYETLSAPLSEVPILRNQFLNNQWKKISADNP---SKDVKCKHG 2080
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETT-QECTEEGIAKVP-P 600
D QV +DF EGNDEDSSIQ TDRVF+E+G+P SS DHS D ETT +ECTEE IAKVP
Sbjct: 2081 DCQVFDDFSEGNDEDSSIQTNTDRVFNELGIPLSSADHSDDGETTEEECTEEAIAKVPHS 2140
Query: 601 VIESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQ 660
VIEST TP KDL+ M DLP S+S + PS MK SSSP QL+LCSTFHFDF EL+KRR+Q
Sbjct: 2141 VIESTGTPIKDLE-MSEDLPLSDSSVLPSGFMKESSSP-QLKLCSTFHFDFHELKKRRMQ 2200
Query: 661 RQLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRM 720
RQLR+KLNGY CE++KL HYAAATL LSQPDNEDRKARA+EAAAKEL+RLFRKEDFSRM
Sbjct: 2201 RQLRYKLNGYICERKKLTCHYAAATLKLSQPDNEDRKARALEAAAKELDRLFRKEDFSRM 2260
Query: 721 KVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 780
KVIGQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE
Sbjct: 2261 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 2320
Query: 781 VVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGE 840
VVVSIHMDVIRKNGF LEEDPHALPGNRF+LKAVPFSKNITFGVEDVKDLISTLADSEGE
Sbjct: 2321 VVVSIHMDVIRKNGFVLEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGE 2380
Query: 841 CSIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNC 900
CSI+GSYRMDTA+SVCPSRVRAMLASRACRSSV IGDPLG EMQKI+EHLA LKSPWNC
Sbjct: 2381 CSIIGSYRMDTANSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKIVEHLAELKSPWNC 2440
Query: 901 PHGRPTMRHLVDLTTIKRLDESDADC 919
PHGRPTMRHLVDLTTIKR DE++ DC
Sbjct: 2441 PHGRPTMRHLVDLTTIKRSDENNPDC 2461
BLAST of Sed0008302 vs. NCBI nr
Match:
XP_022954391.1 (DNA mismatch repair protein PMS1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1488.0 bits (3851), Expect = 0.0e+00
Identity = 780/926 (84.23%), Postives = 840/926 (90.71%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MD GI +DSP+IKPINKG+VHRICSGQVILDLSSAVKELVENSLDAGAT +EISLKDYGE
Sbjct: 1 MDVGIAVDSPSIKPINKGIVHRICSGQVILDLSSAVKELVENSLDAGATSVEISLKDYGE 60
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLAL+HHTSKLSDFPDLQSL TYGFRGEALSSLCSLGNLT+E
Sbjct: 61 EWFQVIDNGSGISPTNFRVLALRHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVE 120
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRTK ESVATHLT+DHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 121 TRTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNSAGKN KS+VFKTQGSG IKDNIITVFGM TFNCLESVS
Sbjct: 181 LISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVS 240
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SDDCKVEGFVSKSG GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI
Sbjct: 241 ILLSDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AIMNFTLPSK+CDVNV PDKRKIFF+DETHILQ LREELLKIYSPINACFSVNKVEEPTK
Sbjct: 301 AIMNFTLPSKACDVNVTPDKRKIFFSDETHILQRLREELLKIYSPINACFSVNKVEEPTK 360
Query: 361 QVDSLE-HSDHEKLSMLSD-FSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDS+E SD KLSML + FSPD G +D SH++LADNDDSL+++EN+E+SS +IEV+
Sbjct: 361 QVDSVELCSDKRKLSMLVEHFSPDEGKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVV 420
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
+SDGEEN+ R+DF LRVHGMKKADA D DQH KT S+KG+ + PSSPC+TV+G++T
Sbjct: 421 SSDGEENITRKDFALRVHGMKKADAFLKDYDQHKKTCFSSKKGEQITPSSPCVTVTGTNT 480
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+ NKRKYETLSAPLSEVPILRNQF NNQ KK A++ SKDVKCTHG
Sbjct: 481 SRVQSSLDKFVTTNKRKYETLSAPLSEVPILRNQFLNNQWKKISADNP---SKDVKCTHG 540
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETT-QECTEEGIAKVP-P 600
+ QV +DF EGNDEDSSIQ TDRVF+E+G+P SS DHS D ETT +ECTEE IAKVP
Sbjct: 541 NCQVFDDFSEGNDEDSSIQTNTDRVFNELGIPLSSADHSDDGETTEEECTEEAIAKVPHS 600
Query: 601 VIESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQ 660
VIEST TP KDL+ M DLP S+S + PS MK SSSP QL+LCST HFDF EL+KRR Q
Sbjct: 601 VIESTGTPIKDLE-MSEDLPLSDSSVLPSGFMKESSSP-QLKLCSTCHFDFHELKKRRTQ 660
Query: 661 RQLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRM 720
RQLR KLNGY CE++KLK HYAAATL LSQPDNEDRKARA+EAAAKEL+RLFRKEDFSRM
Sbjct: 661 RQLRDKLNGYICERKKLKCHYAAATLKLSQPDNEDRKARALEAAAKELDRLFRKEDFSRM 720
Query: 721 KVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 780
KV+GQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE
Sbjct: 721 KVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 780
Query: 781 VVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGE 840
VVVSIHMDVIRKNGF LEEDPHALPGNRF+LKAVPFSKNITFGVEDVKDLISTLADSEGE
Sbjct: 781 VVVSIHMDVIRKNGFVLEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGE 840
Query: 841 CSIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNC 900
CSI+GSYRMDTA+SVCPSRVRAMLASRACRSSV IGDPLG EMQKI+EHLA LKSPWNC
Sbjct: 841 CSIIGSYRMDTANSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKIVEHLAELKSPWNC 900
Query: 901 PHGRPTMRHLVDLTTIKRLDESDADC 919
PHGRPTMRHLVDLTTIKR DE++ DC
Sbjct: 901 PHGRPTMRHLVDLTTIKRSDENNPDC 921
BLAST of Sed0008302 vs. NCBI nr
Match:
XP_038899185.1 (DNA mismatch repair protein PMS1 isoform X1 [Benincasa hispida])
HSP 1 Score: 1482.6 bits (3837), Expect = 0.0e+00
Identity = 776/925 (83.89%), Postives = 834/925 (90.16%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MD GI +DSPTIKPINKG+VHRIC+GQVILDLSSAVKELVENSLDAGAT IEI+LKDYGE
Sbjct: 1 MDTGIALDSPTIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEIALKDYGE 60
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSL TYGFRGEALSSLCSLG LT+E
Sbjct: 61 EWFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVE 120
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRT ESVATHLT+DHSGLLVAEKKTARQVGTT+MVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 121 TRTNNESVATHLTFDHSGLLVAEKKTARQVGTTIMVKKLFSNLPVRSKEFSRNIRKEYGK 180
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNSAGKN KS+VFKTQGSG IKDNIITVFGMNTFNCLESVS
Sbjct: 181 LISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVS 240
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SDDCK+EGFVSKSG GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI
Sbjct: 241 ILLSDDCKIEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AIMNFTLPSK+ DVNV PDKRKIFF+DETHILQTLREELLKIYSP NAC+SVNKVEEPTK
Sbjct: 301 AIMNFTLPSKAYDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTK 360
Query: 361 QVDSLE-HSDHEKLSMLSD-FSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDSLE SD+ KLSML + FSPDGGD + SH LAD+DDS + ++N E+SSH+ EVL
Sbjct: 361 QVDSLELCSDNGKLSMLLEHFSPDGGDLRVASSHQPLADDDDSFKEIKNAEQSSHTTEVL 420
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
NSDGEEN+ R+DFTLR+HGMK ADAL D+DQH KTYL S+KG V PSSP +TV G+DT
Sbjct: 421 NSDGEENITRKDFTLRMHGMKNADALIKDRDQHKKTYLSSKKGVQVTPSSPSVTVGGTDT 480
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+INKRKYE LSAPL+EVPILRNQF NNQ KKSCA+ K SKDV+CTHG
Sbjct: 481 SRVQSSLDKFVTINKRKYENLSAPLTEVPILRNQFLNNQWKKSCAD---KPSKDVECTHG 540
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETTQECTEEGIAKV-PPV 600
+ Q +DF GNDEDSSIQ KTDRV S++ LP SS DHS D E T++CT E IAKV P V
Sbjct: 541 NCQAFDDFSVGNDEDSSIQIKTDRVSSKLSLPLSSADHSDDGEATEKCTGEAIAKVHPSV 600
Query: 601 IESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQR 660
IES+ATPTKDL+IM DLP S + PS MK SSSP L+LCSTFHFDF EL+KRR QR
Sbjct: 601 IESSATPTKDLEIMSEDLPLSGCSVLPSGFMKESSSP-LLKLCSTFHFDFHELKKRRSQR 660
Query: 661 QLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRMK 720
+LR+KLNGYTCE++KLK HYAAATL LSQPDNEDRKARA+EAAA+EL+RLFRK+DFSRMK
Sbjct: 661 RLRYKLNGYTCERKKLKCHYAAATLKLSQPDNEDRKARALEAAARELDRLFRKKDFSRMK 720
Query: 721 VIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
VIGQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV
Sbjct: 721 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
Query: 781 VVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
VVSIHMDV RKNGFT+EEDP AL NRF+LKAVPFSKNITFGVEDVKDLISTLADSEGEC
Sbjct: 781 VVSIHMDVFRKNGFTIEEDPRALSSNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
Query: 841 SIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNCP 900
SI+GSYRMDTADSVCPSRVRAMLASRACRSSV IGDPLG EMQKILEHLA LKSPWNCP
Sbjct: 841 SIIGSYRMDTADSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKILEHLAELKSPWNCP 900
Query: 901 HGRPTMRHLVDLTTIKRLDESDADC 919
HGRPTMRHLVDLTTIKR +ESDADC
Sbjct: 901 HGRPTMRHLVDLTTIKRSEESDADC 921
BLAST of Sed0008302 vs. ExPASy Swiss-Prot
Match:
Q941I6 (DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana OX=3702 GN=PMS1 PE=1 SV=1)
HSP 1 Score: 939.9 bits (2428), Expect = 2.2e-272
Identity = 522/923 (56.55%), Postives = 651/923 (70.53%), Query Frame = 0
Query: 9 SPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGEDSFQVIDN 68
SP I+PIN+ V+HRICSGQVILDLSSAVKELVENSLDAGAT IEI+L+DYGED FQVIDN
Sbjct: 14 SPLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDN 73
Query: 69 GSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIETRTKYESV 128
G GISPTNF+VLALKHHTSKL DF DL +L TYGFRGEALSSLC+LGNLT+ETRTK E V
Sbjct: 74 GCGISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPV 133
Query: 129 ATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAY 188
AT LT+DHSGLL AEKKTARQ+GTTV V+KLFSNLPVRSKEF RNIRKEYGKL+SLLNAY
Sbjct: 134 ATLLTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVSLLNAY 193
Query: 189 AVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVSILISDDCK 248
A+IA GVRFVC+N+ GKN KS+V TQG G +KDNIITVFG++TF L+ VSI +S+DC+
Sbjct: 194 ALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVSICVSEDCR 253
Query: 249 VEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLP 308
VEGF+SK G G+GRNL DRQ+FF+N RPVDMPKVSKLVNELYK +SR+YP+ I++F +P
Sbjct: 254 VEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYPVTILDFIVP 313
Query: 309 SKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTKQVDSLEHS 368
+CD+NV PDKRK+FF+DET ++ +LRE L +IYS NA + VN+ EE ++Q D S
Sbjct: 314 GGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNASYIVNRFEENSEQPDKAGVS 373
Query: 369 DHEKLSMLSDFSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVLNSDGEENMNR 428
+K S L S + D + E +E+ + S+ + D M +
Sbjct: 374 SFQKKSNLL-------------SEGIVLDVSSKTRLGEAIEKENPSLREVEIDNSSPMEK 433
Query: 429 RDFTLRVHGMKKADALDQDQHMKTYLGS--RKGKLVYPSSPCMTVSGSDTS-----RQSS 488
F ++ G KK + H T+L KG + +T + D S QS+
Sbjct: 434 FKFEIKACGTKKGEG-SLSVHDVTHLDKTPSKGLPQLNVTEKVTDASKDLSSRSSFAQST 493
Query: 489 LDKFVSINKRKYETLSAPLSEVPILRNQFNN-QLKKSCAESAAKLSKDVKCTHGDSQVIE 548
L+ FV++ KRK+E +S LSE P+LRNQ ++ +++KS E A S +C
Sbjct: 494 LNTFVTMGKRKHENISTILSETPVLRNQTSSYRVEKSKFEVRALAS---RC--------- 553
Query: 549 DFFEGNDEDSSIQHKTDRV----FSEVGLPKSSEDHSGDEETTQECTEEGIAKVPPVIES 608
EG+ D + K D SE+G S + + E + E+ I P ++
Sbjct: 554 -LVEGDQLDDMVISKEDMTPSERDSELGNRISPGTQADNVERHEREHEKPIRFEEPTSDN 613
Query: 609 TATPTKDLDIMFNDLPP-SNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQRQL 668
T T D++ + D P S L + V+ + + ++ ST F F LR RRL+R
Sbjct: 614 TLT-KGDVERVSEDNPRCSQPLRSVATVLDSPAQSTGPKMFSTLEFSFQNLRTRRLERLS 673
Query: 669 RFKLNGYTCE---QRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRM 728
R + GY + + K+ +AAATL LSQPD+E+RKARA+ AA ELERLFRKEDF RM
Sbjct: 674 RLQSTGYVSKCMNTPQPKKCFAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRM 733
Query: 729 KVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 788
+V+GQFNLGFII KL++DLFI+DQHAADEK+NFE L++ST+LNQQPLL+PL LELS EEE
Sbjct: 734 QVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEE 793
Query: 789 VVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGE 848
V V +HMD+IR+NGF LEE+P A PG F+L+A+P+SKNITFGVED+KDLISTL D+ GE
Sbjct: 794 VTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGE 853
Query: 849 CSIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNC 908
CS+ SY+ DS+CPSRVRAMLASRACRSSV IGDPL EMQKI+EHLA L+SPWNC
Sbjct: 854 CSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLADLESPWNC 908
Query: 909 PHGRPTMRHLVDLTTIKRLDESD 916
PHGRPTMRHLVDLTT+ L + D
Sbjct: 914 PHGRPTMRHLVDLTTLLTLPDDD 908
BLAST of Sed0008302 vs. ExPASy Swiss-Prot
Match:
P54278 (Mismatch repair endonuclease PMS2 OS=Homo sapiens OX=9606 GN=PMS2 PE=1 SV=2)
HSP 1 Score: 485.3 bits (1248), Expect = 1.5e-135
Identity = 337/935 (36.04%), Postives = 484/935 (51.76%), Query Frame = 0
Query: 12 IKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGEDSFQVIDNGSG 71
IKPI++ VH+ICSGQV+L LS+AVKELVENSLDAGAT I++ LKDYG D +V DNG G
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIETRTKYESVATH 131
+ NF L LKHHTSK+ +F DL + T+GFRGEALSSLC+L ++TI T V T
Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134
Query: 132 LTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVI 191
L +DH+G ++ + R GTTV V++LFS LPVR KEF RNI+KEY K++ +L+AY +I
Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194
Query: 192 ATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCL-------------ES 251
+ G+R CTN G+ + V T GS IK+NI +VFG L E
Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254
Query: 252 VSILISDDCK----VEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSAN 311
+ SD + GF+S+ HG GR+ DRQFFF+N RP D KV +LVNE+Y N
Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYN 314
Query: 312 SRQYPIAIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIY-SPINACFSVN 371
QYP ++N ++ S+ D+NV PDKR+I +E +L L+ L+ ++ S +N +N
Sbjct: 315 RHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDVN---KLN 374
Query: 372 KVEEPTKQVD----SLEHSDHEKLSMLSDFSPDGGDHKDVPSHMSLADNDDSLEIVENME 431
++P V+ + +D EK + D S + E
Sbjct: 375 VSQQPLLDVEGNLIKMHAADLEK--------------------PMVEKQDQSPSLRTGEE 434
Query: 432 ESSHSIEVLNSDGEENMNRRDFTLRVHGMKKADALDQDQHMKTYLGSRKGKLVYPSSPCM 491
+ SI L R F+LR K + + ++ LG ++G L +S +
Sbjct: 435 KKDVSISRL---------REAFSLRHTTENKPHSPKTPEPRRSPLGQKRGMLSSSTSGAI 494
Query: 492 TVSGSDTSRQSSLDKFVSINKRKYETLSAPLSEVPILRNQFNNQLKKSCAESAAKLSKDV 551
+ G + + + E +S+ S P S A++ KD
Sbjct: 495 SDKG--------------VLRPQKEAVSS--SHGP------------SDPTDRAEVEKD- 554
Query: 552 KCTHGDSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETTQECTEEGIAK 611
HG + V + F D S H + + + S++H +E + T++ +
Sbjct: 555 -SGHGSTSVDSEGFSIPDTGS---HCSSEYAASSPGDRGSQEHVDSQEKAPK-TDDSFSD 614
Query: 612 VPPVIESTATPTKDLDIMFNDLP-PSNSLIPPSCVMKGSSSPSQLELCSTFHFDFD---- 671
V + +D F LP P+N P + K S ++C D
Sbjct: 615 V-----DCHSNQEDTGCKFRVLPQPTNLATPNTKRFKKEEILSSSDICQKLVNTQDMSAS 674
Query: 672 --ELRKRRLQRQLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAV------EAA 731
++ + ++ + + + +R + H+ A S+ + RK RA +AA
Sbjct: 675 QVDVAVKINKKVVPLDFSMSSLAKRIKQLHHEAQQ---SEGEQNYRKFRAKICPGENQAA 734
Query: 732 AKELERLFRKEDFSRMKVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQ 791
EL + K F+ M++IGQFNLGFII KL++D+FI+DQHA DEKYNFE L Q T+L
Sbjct: 735 EDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQG 794
Query: 792 QPLLRPLRLELSAEEEVVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGV 851
Q L+ P L L+A E V+ ++++ RKNGF D +A R KL ++P SKN TFG
Sbjct: 795 QRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGP 854
Query: 852 EDVKDLISTLADSEGECSIMGSYRMDTADSVC-PSRVRAMLASRACRSSVRIGDPLGIYE 911
+DV +LI L+DS G +C PSRV+ M ASRACR SV IG L E
Sbjct: 855 QDVDELIFMLSDSPG--------------VMCRPSRVKQMFASRACRKSVMIGTALNTSE 861
BLAST of Sed0008302 vs. ExPASy Swiss-Prot
Match:
F1NQJ3 (Mismatch repair endonuclease PMS2 OS=Gallus gallus OX=9031 GN=PMS2 PE=2 SV=3)
HSP 1 Score: 484.2 bits (1245), Expect = 3.3e-135
Identity = 337/928 (36.31%), Postives = 481/928 (51.83%), Query Frame = 0
Query: 11 TIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGEDSFQVIDNGS 70
TIK I++ VHRICSGQV+L L +AVKELVENSLDAGAT I++ LKD+G + +V DNG
Sbjct: 13 TIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGG 72
Query: 71 GISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIETRTKYESVAT 130
G+ NF L LKH+TSK+ DF DL + T+GFRGEALSSLC+L ++TI T K V T
Sbjct: 73 GVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSAKVGT 132
Query: 131 HLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAV 190
L +DH+G + + RQ GTTV +++LF LPVR KEF RNI+KEY K++ +L AY +
Sbjct: 133 RLVFDHNGKITQKAPYPRQQGTTVSIQQLFHTLPVRHKEFQRNIKKEYAKMVQILQAYCI 192
Query: 191 IATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCL---------ESVSI 250
I+ GVR CTN G+ KS V T G +K+NI VFG L E+V
Sbjct: 193 ISKGVRINCTNQVGQGKKSPVVSTTGGPNLKENIGAVFGKKQLQSLIPFVQLPPNEAVCE 252
Query: 251 ---LISDDC-----KVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSA 310
L S D + GF+S+ HG GR+ DRQFFF+N RP D KV KLVNE+Y
Sbjct: 253 EYGLKSTDLPEKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHLY 312
Query: 311 NSRQYPIAIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVN 370
N QYP ++N + S+ D+NV PDKR+I +E +L L+ L++++ VN
Sbjct: 313 NKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEMFGS-----DVN 372
Query: 371 KVEEPTKQVDSLEH-----SDHEK----LSMLSDFSPDGGDHKDVPSHMSLADNDDSLEI 430
K+ +D + + D EK +S S+ + K V + +S SL
Sbjct: 373 KLNVNQNLLDIVGNVKAPPGDAEKPWVEMSHHSETENPSSEGKRVMT-LSRLRESFSLHQ 432
Query: 431 VENMEESSHSIEVLNSDGEENMNRRDFTLRVHGMKKADALDQDQHMKTYLGSRKGKLVYP 490
E+ +S ++ +S ++ D L +KA L +D K K+ P
Sbjct: 433 TESYFQSPKKVKQRHSSSKQ--LSLDTILSTVRTQKA-VLSEDSES---CHEMKSKMPVP 492
Query: 491 SSPCMTVSGSDTSRQSSLDKFVSINKRKYETLSAPLSEVPILRNQFNNQLKKSCAESAAK 550
V D+ S+ + N P + ++ NN +++ S +
Sbjct: 493 RKYLRKVDDIDSGFCSTSESDAGYN--------TPEAGSCVISESVNNPIEEEFCSSEEQ 552
Query: 551 LSKDVKCTHGDSQVIEDFFEGNDEDSSIQHKTDRV---FSEVGLPKSSEDHSGDEETTQE 610
+ T G S E E + + +HK +RV ++ LP+ + + +
Sbjct: 553 HQNEYLKTVGHS---EKSLECDIQVLGTEHKLNRVNDCNNQTNLPQEATNSLPRVRRFKN 612
Query: 611 CTEEGIAKVPPVIESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHF 670
++ A + P +E+T +D++ + +P MK +
Sbjct: 613 EADDFKAGIHPKVENTRNYMPCVDVL---VEVKKKTVPLEFSMKALA------------- 672
Query: 671 DFDELRKRRLQRQLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELE 730
+ +RK Q+Q C + + R + A +S +N + A EL
Sbjct: 673 --ERVRKIVQQQQ--------KCTETQNYRRFRAK---ISPGEN--------KVAEDELR 732
Query: 731 RLFRKEDFSRMKVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLR 790
+ KE F++M++IGQFNLGFII KL+ DLFIIDQHA DEKYNFE L Q T+L Q L+
Sbjct: 733 KEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIA 792
Query: 791 PLRLELSAEEEVVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKD 850
P L L+A E V+ ++++ RKNGF + +A R KL ++P SKN TFG +D+ +
Sbjct: 793 PQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTSKNWTFGPQDIDE 852
Query: 851 LISTLADSEGECSIMGSYRMDTADSVC-PSRVRAMLASRACRSSVRIGDPLGIYEMQKIL 909
LI L+D G +C PSRVR M ASRACR SV IG L + EM+K++
Sbjct: 853 LIFMLSDCPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNVQEMKKLV 866
BLAST of Sed0008302 vs. ExPASy Swiss-Prot
Match:
Q54QA0 (Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum OX=44689 GN=pms1 PE=3 SV=1)
HSP 1 Score: 467.2 bits (1201), Expect = 4.2e-130
Identity = 350/1030 (33.98%), Postives = 513/1030 (49.81%), Query Frame = 0
Query: 12 IKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGEDSFQVIDNGSG 71
IK I+K ++ ICSGQVI DLS AVKEL+ENS+DAGAT +EI LK+YGE+ +VIDNGSG
Sbjct: 2 IKAIDKESINNICSGQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSG 61
Query: 72 ISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIETRTKYESVATH 131
+ P+NF L +KH TSKL F DL S+ TYGFRGEALSSLCSL N I TRTK + A
Sbjct: 62 VEPSNFVALTMKHCTSKLESFSDLLSIETYGFRGEALSSLCSLSNCIITTRTKNQVTAQR 121
Query: 132 LTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVI 191
L +D G + + AR+VGTTV + LF LPVR +EF RNI+KEY KL+++L AYA+I
Sbjct: 122 LVFDKEGKIQTQTPVAREVGTTVQLSNLFKGLPVRYQEFKRNIKKEYAKLLTILQAYALI 181
Query: 192 ATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVSILISDDC-KVE 251
+T R C N AGK+ +S V T I+DN+I VFG L+ + SD KV
Sbjct: 182 STNTRITCYNQAGKSPRSCVLSTTSGSTIRDNLINVFGTKMSQSLDEFT--ASDSLFKVN 241
Query: 252 GFVSKSGHGSG----------------------------------------RNLGDRQFF 311
G +SK G GSG R+ DRQFF
Sbjct: 242 GLISKIGIGSGTGQSISNSSSSSSQSSSQLSSSSSSSSSSQSSQLSIGSLSRSCADRQFF 301
Query: 312 FVNNRPVDMPKVSKLVNELYKSANSR-QYPIAIMNFTLPSKSCDVNVNPDKRKIFFTDET 371
FVN+RP + K++K +N LY+S + R YP+ I N +P+ + DVNV PDKR IF E
Sbjct: 302 FVNSRPFEHSKLAKEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQ 361
Query: 372 HILQTLREELLKIYSPINACFSVNKVEEPT-KQVDSLEHSDHEKLSMLSDF--------S 431
+L + + L ++ + F N++ + T + ++S++ K S +S F
Sbjct: 362 QLLLLITDGLKTMWETAQSVFDTNQLGQFTFNDENENDNSNNNKQSKISSFPNLYTLKTE 421
Query: 432 PDGGDHK---DVPSHMSLADNDDSLEIVENMEESSHSIEVLNSDGEENMNRRDFTLRVHG 491
D ++K + H S SL + ++SS+S +S N N R+ L G
Sbjct: 422 EDENNNKITTPIKKH-STTTTTSSLNSPSSNKKSSNSTS--SSSSSNNKNNRN-NLEEDG 481
Query: 492 MKKADALDQD-----QHMKTYLGSRKGKLVYPSSPCMTVSGSDTSRQSSLDK-------F 551
D DQ ++ Y S K K P +P ++ + D+ F
Sbjct: 482 DDSFDITDQQPLKRAKYDGNYNNSNK-KPELPKTPYPNKKKNNENEDEDEDEDNYVQPVF 541
Query: 552 VSINKRKYETLSAPLSEVP--ILRNQFNNQLK------------KSCAESAAKLSKDVKC 611
++NK K + S + + I N+F ++ K + + S +K
Sbjct: 542 SNVNKSKNSSNSGSSNSLDDIIDDNEFISRSNGNSSNFMDDFEFKGSSNNIGSSSNGIKL 601
Query: 612 -----------THGDSQVIEDF--------------------FEGNDEDSSIQHKTDRVF 671
++ +++I+D +G+DE+ Q + +
Sbjct: 602 KTISNNNNSNNSNNSNKIIDDINKTIDKMKQQQQPQQKMGLNDDGDDEEQQKQKQQQQQQ 661
Query: 672 SEVGLPKSSEDHSGDEETTQECTEEGIAKVPPVIESTA-TPTKDLDIMFNDLPPSNSLIP 731
+ + +EET ++ I++ T +K I N+ I
Sbjct: 662 KRKQQQQQQQIEEEEEETIDGYKQKNSKTFDITIKTDLNTISKQYLIRNGTFDKDNNPII 721
Query: 732 PSCVMKGSSSPSQLELCSTFHFDFDELRKR-------------RLQRQLRFKLNGYTCEQ 791
P+ + S+ + ++ FD + + +L + L G +Q
Sbjct: 722 PNTALVVSNDDMVVNNNNSNEFDQNSIITTTSEKCCIVDKSIPQLDGKFSTSLGGIGAKQ 781
Query: 792 RKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRMKVIGQFNLGFIIGK 851
++ AAT V SQ + + + A +EL + F+KE F +M VIGQFNLGFII K
Sbjct: 782 QQ-----KAATQVTSQLQQQPSQTNQ-KTAEEELTKFFKKEYFKQMIVIGQFNLGFIIAK 841
Query: 852 LDQDLFIIDQHAADEKYNFERLSQS--TILNQQPLLRPLRL-ELSAEEEVVVSIHMDVIR 911
L DLFIIDQHAADEKYNFE LS+S + +N QPLL+P L +L++EEE+++ ++D+ +
Sbjct: 842 LGNDLFIIDQHAADEKYNFEILSKSVESSINSQPLLKPDTLSDLTSEEELIIIENVDLFK 901
Query: 912 KNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGECSIMGSYRMDT 914
KNGF D A + KL A P +FG++D+ + I + +S SI GS
Sbjct: 902 KNGFKFIIDHDAPTRFKIKLSAFPIIHGQSFGIKDIYEWIFMIKES----SIPGSVNK-- 961
BLAST of Sed0008302 vs. ExPASy Swiss-Prot
Match:
P54279 (Mismatch repair endonuclease PMS2 OS=Mus musculus OX=10090 GN=Pms2 PE=2 SV=1)
HSP 1 Score: 440.7 bits (1132), Expect = 4.2e-122
Identity = 324/922 (35.14%), Postives = 452/922 (49.02%), Query Frame = 0
Query: 12 IKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGEDSFQVIDNGSG 71
IKPI+ VH+ICSGQVIL LS+AVKEL+ENS+DAGAT I++ LKDYG D +V DNG G
Sbjct: 15 IKPIDGKSVHQICSGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIETRTKYESVATH 131
+ NF LALKHHTSK+ +F DL + T+GFRGEALSSLC+L ++TI T SV T
Sbjct: 75 VEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTR 134
Query: 132 LTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVI 191
L +DH+G + + R GTTV V+ LF LPVR KEF RNI+KEY K++ +L AY +I
Sbjct: 135 LVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYSKMVQVLQAYCII 194
Query: 192 ATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVSILISDDCKVEG 251
+ GVR CTN G+ + V T G+ +K+NI +VFG L L D E
Sbjct: 195 SAGVRVSCTNQLGQGKRHAVVCTSGTSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEE 254
Query: 252 F-VSKSG------------HGSGRNLGDRQ----FFFVNNRPVDMPKVSKLVNELYKSAN 311
+ +S SG H + G Q F PV + L Y N
Sbjct: 255 YGLSTSGRHKTFSTFRASFHSARTAPGGVQQTGSFSSSIRGPVTQQRSLSLSMRFYHMYN 314
Query: 312 SRQYPIAIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNK 371
QYP ++N ++ S+ D+NV PDKR+I +E +L L+ L+ ++ +VN
Sbjct: 315 RHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDANKLNVN- 374
Query: 372 VEEPTKQVDSLEHSDHEKLSMLSDFSPDGGDHKDVPSHMSLADNDDSLEIVENMEE-SSH 431
++P V+ + KL P G + PS S AD I E S H
Sbjct: 375 -QQPLLDVE----GNLVKLHTAELEKPVPGKQDNSPSLKSTADEKRVASISRLREAFSLH 434
Query: 432 SIEVLNSDGEENMN-RRDFTLRVHGMKKADALDQDQHMKTYLGSR--KGKLVYPS-SPCM 491
+ + S G E R F G+ + D + +Y G R + KLV P+ SP
Sbjct: 435 PTKEIKSRGPETAELTRSFPSEKRGVLSSYPSD----VISYRGLRGSQDKLVSPTDSPGD 494
Query: 492 TVSGSDTSRQSSLDKFVSINKRKYETLSAPLSEVPILRNQFNNQLKKSCAESAAKLSKDV 551
+ + S L + ++ ++ T P + + F++ S E + +
Sbjct: 495 CMDREKIEKDSGLSSTSAGSEEEFST--------PEVASSFSSDYNVSSLEDRPS-QETI 554
Query: 552 KCTHGDSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETTQECTEEGIAK 611
C D + ED Q K + L + S ++ +T + + I++
Sbjct: 555 NCGDLDCRPPGTGQSLKPEDHGYQCKA------LPLARLSPTNAKRFKTEERPSNVNISQ 614
Query: 612 VPPVIESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKR 671
P +ST+ D+ I N + F L KR
Sbjct: 615 RLPGPQSTSAAEVDVAIKMN------------------------KRIVLLEFSLSSLAKR 674
Query: 672 RLQRQLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDF 731
Q Q N + RK + + +N +AA EL + K F
Sbjct: 675 MKQLQHLKAQNKHELSYRKFRAK-------ICPGEN--------QAAEDELRKEISKSMF 734
Query: 732 SRMKVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSA 791
+ M+++GQFNLGFI+ KL +DLF++DQHAADEKYNFE L Q T+L Q L+ P L L+A
Sbjct: 735 AEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTA 794
Query: 792 EEEVVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADS 851
E V+ ++++ RKNGF D A R KL ++P SKN TFG +D+ +LI L+DS
Sbjct: 795 VNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDS 854
Query: 852 EGECSIMGSYRMDTADSVC-PSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKS 911
G +C PSRVR M ASRACR SV IG L EM+K++ H+ +
Sbjct: 855 PG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDH 858
BLAST of Sed0008302 vs. ExPASy TrEMBL
Match:
A0A6J1GQV6 (DNA mismatch repair protein PMS1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456643 PE=3 SV=1)
HSP 1 Score: 1492.6 bits (3863), Expect = 0.0e+00
Identity = 780/925 (84.32%), Postives = 840/925 (90.81%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MD GI +DSP+IKPINKG+VHRICSGQVILDLSSAVKELVENSLDAGAT +EISLKDYGE
Sbjct: 1 MDVGIAVDSPSIKPINKGIVHRICSGQVILDLSSAVKELVENSLDAGATSVEISLKDYGE 60
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLAL+HHTSKLSDFPDLQSL TYGFRGEALSSLCSLGNLT+E
Sbjct: 61 EWFQVIDNGSGISPTNFRVLALRHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVE 120
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRTK ESVATHLT+DHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 121 TRTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNSAGKN KS+VFKTQGSG IKDNIITVFGM TFNCLESVS
Sbjct: 181 LISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVS 240
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SDDCKVEGFVSKSG GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI
Sbjct: 241 ILLSDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AIMNFTLPSK+CDVNV PDKRKIFF+DETHILQ LREELLKIYSPINACFSVNKVEEPTK
Sbjct: 301 AIMNFTLPSKACDVNVTPDKRKIFFSDETHILQRLREELLKIYSPINACFSVNKVEEPTK 360
Query: 361 QVDSLE-HSDHEKLSMLSD-FSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDS+E SD KLSML + FSPD G +D SH++LADNDDSL+++EN+E+SS +IEV+
Sbjct: 361 QVDSVELCSDKRKLSMLVEHFSPDEGKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVV 420
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
+SDGEEN+ R+DF LRVHGMKKADA D DQH KT S+KG+ + PSSPC+TV+G++T
Sbjct: 421 SSDGEENITRKDFALRVHGMKKADAFLKDYDQHKKTCFSSKKGEQITPSSPCVTVTGTNT 480
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+ NKRKYETLSAPLSEVPILRNQF NNQ KK A++ SKDVKCTHG
Sbjct: 481 SRVQSSLDKFVTTNKRKYETLSAPLSEVPILRNQFLNNQWKKISADNP---SKDVKCTHG 540
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETTQECTEEGIAKVP-PV 600
+ QV +DF EGNDEDSSIQ TDRVF+E+G+P SS DHS D ETT+ECTEE IAKVP V
Sbjct: 541 NCQVFDDFSEGNDEDSSIQTNTDRVFNELGIPLSSADHSDDGETTEECTEEAIAKVPHSV 600
Query: 601 IESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQR 660
IEST TP KDL+ M DLP S+S + PS MK SSSP QL+LCST HFDF EL+KRR QR
Sbjct: 601 IESTGTPIKDLE-MSEDLPLSDSSVLPSGFMKESSSP-QLKLCSTCHFDFHELKKRRTQR 660
Query: 661 QLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRMK 720
QLR KLNGY CE++KLK HYAAATL LSQPDNEDRKARA+EAAAKEL+RLFRKEDFSRMK
Sbjct: 661 QLRDKLNGYICERKKLKCHYAAATLKLSQPDNEDRKARALEAAAKELDRLFRKEDFSRMK 720
Query: 721 VIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
V+GQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV
Sbjct: 721 VVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
Query: 781 VVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
VVSIHMDVIRKNGF LEEDPHALPGNRF+LKAVPFSKNITFGVEDVKDLISTLADSEGEC
Sbjct: 781 VVSIHMDVIRKNGFVLEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
Query: 841 SIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNCP 900
SI+GSYRMDTA+SVCPSRVRAMLASRACRSSV IGDPLG EMQKI+EHLA LKSPWNCP
Sbjct: 841 SIIGSYRMDTANSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKIVEHLAELKSPWNCP 900
Query: 901 HGRPTMRHLVDLTTIKRLDESDADC 919
HGRPTMRHLVDLTTIKR DE++ DC
Sbjct: 901 HGRPTMRHLVDLTTIKRSDENNPDC 920
BLAST of Sed0008302 vs. ExPASy TrEMBL
Match:
A0A6J1GQS5 (DNA mismatch repair protein PMS1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456643 PE=3 SV=1)
HSP 1 Score: 1488.0 bits (3851), Expect = 0.0e+00
Identity = 780/926 (84.23%), Postives = 840/926 (90.71%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MD GI +DSP+IKPINKG+VHRICSGQVILDLSSAVKELVENSLDAGAT +EISLKDYGE
Sbjct: 1 MDVGIAVDSPSIKPINKGIVHRICSGQVILDLSSAVKELVENSLDAGATSVEISLKDYGE 60
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLAL+HHTSKLSDFPDLQSL TYGFRGEALSSLCSLGNLT+E
Sbjct: 61 EWFQVIDNGSGISPTNFRVLALRHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVE 120
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRTK ESVATHLT+DHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 121 TRTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNSAGKN KS+VFKTQGSG IKDNIITVFGM TFNCLESVS
Sbjct: 181 LISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVS 240
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SDDCKVEGFVSKSG GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI
Sbjct: 241 ILLSDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AIMNFTLPSK+CDVNV PDKRKIFF+DETHILQ LREELLKIYSPINACFSVNKVEEPTK
Sbjct: 301 AIMNFTLPSKACDVNVTPDKRKIFFSDETHILQRLREELLKIYSPINACFSVNKVEEPTK 360
Query: 361 QVDSLE-HSDHEKLSMLSD-FSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDS+E SD KLSML + FSPD G +D SH++LADNDDSL+++EN+E+SS +IEV+
Sbjct: 361 QVDSVELCSDKRKLSMLVEHFSPDEGKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVV 420
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
+SDGEEN+ R+DF LRVHGMKKADA D DQH KT S+KG+ + PSSPC+TV+G++T
Sbjct: 421 SSDGEENITRKDFALRVHGMKKADAFLKDYDQHKKTCFSSKKGEQITPSSPCVTVTGTNT 480
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+ NKRKYETLSAPLSEVPILRNQF NNQ KK A++ SKDVKCTHG
Sbjct: 481 SRVQSSLDKFVTTNKRKYETLSAPLSEVPILRNQFLNNQWKKISADNP---SKDVKCTHG 540
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETT-QECTEEGIAKVP-P 600
+ QV +DF EGNDEDSSIQ TDRVF+E+G+P SS DHS D ETT +ECTEE IAKVP
Sbjct: 541 NCQVFDDFSEGNDEDSSIQTNTDRVFNELGIPLSSADHSDDGETTEEECTEEAIAKVPHS 600
Query: 601 VIESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQ 660
VIEST TP KDL+ M DLP S+S + PS MK SSSP QL+LCST HFDF EL+KRR Q
Sbjct: 601 VIESTGTPIKDLE-MSEDLPLSDSSVLPSGFMKESSSP-QLKLCSTCHFDFHELKKRRTQ 660
Query: 661 RQLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRM 720
RQLR KLNGY CE++KLK HYAAATL LSQPDNEDRKARA+EAAAKEL+RLFRKEDFSRM
Sbjct: 661 RQLRDKLNGYICERKKLKCHYAAATLKLSQPDNEDRKARALEAAAKELDRLFRKEDFSRM 720
Query: 721 KVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 780
KV+GQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE
Sbjct: 721 KVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 780
Query: 781 VVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGE 840
VVVSIHMDVIRKNGF LEEDPHALPGNRF+LKAVPFSKNITFGVEDVKDLISTLADSEGE
Sbjct: 781 VVVSIHMDVIRKNGFVLEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGE 840
Query: 841 CSIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNC 900
CSI+GSYRMDTA+SVCPSRVRAMLASRACRSSV IGDPLG EMQKI+EHLA LKSPWNC
Sbjct: 841 CSIIGSYRMDTANSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKIVEHLAELKSPWNC 900
Query: 901 PHGRPTMRHLVDLTTIKRLDESDADC 919
PHGRPTMRHLVDLTTIKR DE++ DC
Sbjct: 901 PHGRPTMRHLVDLTTIKRSDENNPDC 921
BLAST of Sed0008302 vs. ExPASy TrEMBL
Match:
A0A6J1JMX6 (DNA mismatch repair protein PMS1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488347 PE=3 SV=1)
HSP 1 Score: 1480.3 bits (3831), Expect = 0.0e+00
Identity = 773/925 (83.57%), Postives = 836/925 (90.38%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MD GI +DSPTIKPINKG+VHRICSGQVILDLSSAVKELVENSLDAGATC+EISLKD+GE
Sbjct: 1 MDVGIAVDSPTIKPINKGIVHRICSGQVILDLSSAVKELVENSLDAGATCVEISLKDFGE 60
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLAL+HHTSKLSDFPDLQSL TYGFRGEALSSLCSLGNLT+E
Sbjct: 61 EWFQVIDNGSGISPTNFRVLALRHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVE 120
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRTK ESVATHLT+DHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 121 TRTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNSAGKN KS+VFKTQGSG IKDNIITVFGM T+NCLESVS
Sbjct: 181 LISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMTTYNCLESVS 240
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SDDCKVEGFVSKS GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI
Sbjct: 241 ILLSDDCKVEGFVSKSRQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AIMNF+LPSK+CDVNV PDKRKIFF+DETHIL LREELLKIYSPINAC+SVNKVEEPTK
Sbjct: 301 AIMNFSLPSKACDVNVTPDKRKIFFSDETHILHRLREELLKIYSPINACYSVNKVEEPTK 360
Query: 361 QVDSLE-HSDHEKLSMLSD-FSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDS+E SD KLSML + FSPD + SH++ ADNDDSL++VEN+E+SS +I+V+
Sbjct: 361 QVDSVELCSDKRKLSMLMEHFSPDESKLRGASSHLTSADNDDSLKMVENVEQSSQTIDVV 420
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
NSDGEEN+ R+DF LRVHGMKKADA D DQH KT S+KG+ + PSSPC+TV+G+DT
Sbjct: 421 NSDGEENITRKDFALRVHGMKKADAFLKDYDQHKKTCFSSKKGEQITPSSPCVTVTGTDT 480
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+ NKRKYETLSAPLSEVPILRNQF NNQ KK E+ SKDVKCTHG
Sbjct: 481 SRVQSSLDKFVTKNKRKYETLSAPLSEVPILRNQFLNNQWKKIGPENP---SKDVKCTHG 540
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETTQECTEEGIAKVP-PV 600
D QV +DF EGNDEDSSIQ TDRVF+E+ +P SS DHS D ETT+ECTEE IAKVP V
Sbjct: 541 DCQVFDDFSEGNDEDSSIQTNTDRVFNELSIPLSSADHSDDGETTEECTEEAIAKVPHSV 600
Query: 601 IESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQR 660
IEST TP KDL+ M DL S+S + PS MK SSSP QL+LCSTFHF+F EL+KRR+QR
Sbjct: 601 IESTDTPIKDLE-MSEDLLLSDSSVLPSGFMKESSSP-QLKLCSTFHFEFHELKKRRMQR 660
Query: 661 QLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRMK 720
QLR+KLNGY CE++KLK HYAAATL LSQPDNEDRKARA+EAAAKEL+RLFRKEDF+RMK
Sbjct: 661 QLRYKLNGYICERKKLKCHYAAATLKLSQPDNEDRKARALEAAAKELDRLFRKEDFNRMK 720
Query: 721 VIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
V+GQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV
Sbjct: 721 VVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
Query: 781 VVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
VVSIHMDVIRKNGF LEEDPHALPGNRF+LKAVPFSKNITFGVEDVKDLISTLADSEGEC
Sbjct: 781 VVSIHMDVIRKNGFVLEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
Query: 841 SIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNCP 900
SI+GSYRMDTA+SVCPSRVRAMLASRACRSSV IGDPLG EMQKI+EHLA LKSPWNCP
Sbjct: 841 SIIGSYRMDTANSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKIVEHLAELKSPWNCP 900
Query: 901 HGRPTMRHLVDLTTIKRLDESDADC 919
HGRPTMRHLVDLTTIKR DE++ DC
Sbjct: 901 HGRPTMRHLVDLTTIKRSDENNEDC 920
BLAST of Sed0008302 vs. ExPASy TrEMBL
Match:
A0A6J1D8M2 (DNA mismatch repair protein PMS1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017930 PE=3 SV=1)
HSP 1 Score: 1466.4 bits (3795), Expect = 0.0e+00
Identity = 769/921 (83.50%), Postives = 829/921 (90.01%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
MDGG+ +DSPTIKPINKG+VHRIC+GQVILDLSSAVKELVENSLDAGAT IEI+LKD+GE
Sbjct: 1 MDGGVAVDSPTIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEIALKDFGE 60
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSL TYGFRGEALSSLCSLGNLTIE
Sbjct: 61 EWFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTIE 120
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
TRTK E VATHLT++HSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 121 TRTKNEPVATHLTFNHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRFVCTNS GK+ KS VFKTQGSG +KDNIITVFGMNTFNCLESVS
Sbjct: 181 LISLLNAYAVIAKGVRFVCTNSTGKHAKSAVFKTQGSGSLKDNIITVFGMNTFNCLESVS 240
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+ DDCKVEGFVSKSG GSGRNLGDRQFFFVNNRPVDMPKV KLVNELYKSANSRQYPI
Sbjct: 241 ILLLDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVGKLVNELYKSANSRQYPI 300
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AI+NFTLP K+CDVNV PDKRKIFF+DETHILQTLREELLKIYSP NAC+SVNKVEEPTK
Sbjct: 301 AILNFTLPCKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTK 360
Query: 361 QVDSLEHS-DHEKLSM-LSDFSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDSLE D+ K+SM L+ FSPDG D KD P H LAD+DDSL+I++N+E+SSH+IEV+
Sbjct: 361 QVDSLELCYDNGKVSMLLAHFSPDGDDLKDAPCHKPLADDDDSLKIIKNVEQSSHAIEVV 420
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
NSDGEEN+ R+DF LRVHGMKKA +L D DQH KTYL RKG+ V PSSP +T SG D+
Sbjct: 421 NSDGEENITRKDFALRVHGMKKAGSLLKDHDQHKKTYLSDRKGEQVTPSSPSVTGSGIDS 480
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
+R Q+SLDKFV+INKRKYETLSAPLSEVP+LR+QF NNQ KKS SA K SKDVK THG
Sbjct: 481 TRVQASLDKFVTINKRKYETLSAPLSEVPVLRSQFLNNQWKKS---SADKPSKDVKFTHG 540
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETTQECTEEGIAKVPPVI 600
++ + EGND+D+ IQ K D +FS+ GLP SSEDH DEETT+E +EE AKVPPVI
Sbjct: 541 KHPAVDGYLEGNDDDNYIQLKPDGIFSKTGLPLSSEDHCDDEETTEEFSEE--AKVPPVI 600
Query: 601 ESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQRQ 660
ESTATPTKDL IM DL SNS + PS M SSSP QL+LCSTFHFDF LR+RRLQR
Sbjct: 601 ESTATPTKDLKIMSEDL--SNSSVHPSGSMTESSSP-QLKLCSTFHFDFHGLRERRLQRH 660
Query: 661 LRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRMKV 720
LR KLNGYTCE+++LK HYAAATL LSQPDNEDRKARA+EAAA+EL+RLFRKEDFSRMKV
Sbjct: 661 LRCKLNGYTCERKELKCHYAAATLKLSQPDNEDRKARALEAAARELDRLFRKEDFSRMKV 720
Query: 721 IGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEVV 780
IGQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEVV
Sbjct: 721 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEVV 780
Query: 781 VSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGECS 840
VSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGECS
Sbjct: 781 VSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGECS 840
Query: 841 IMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNCPH 900
I+GSYRMDTADSVCPSRVRAMLASRACRSSV IGDPLG EMQKILEHLA LKSPWNCPH
Sbjct: 841 IIGSYRMDTADSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKILEHLAELKSPWNCPH 900
Query: 901 GRPTMRHLVDLTTIKRLDESD 916
GRPTMRHLVDLTTI+R DE+D
Sbjct: 901 GRPTMRHLVDLTTIQRSDEND 913
BLAST of Sed0008302 vs. ExPASy TrEMBL
Match:
A0A5D3D2J3 (Thiamine diphosphokinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00500 PE=3 SV=1)
HSP 1 Score: 1453.3 bits (3761), Expect = 0.0e+00
Identity = 759/925 (82.05%), Postives = 825/925 (89.19%), Query Frame = 0
Query: 1 MDGGIGIDSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGE 60
M+ G +DSPTIKPINKG+VHRIC+GQVILDLSSAVKELVENSLDAGAT IEISLKDYGE
Sbjct: 256 MEVGNAVDSPTIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGE 315
Query: 61 DSFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIE 120
+ FQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSL TYGFRGEALSSLCSLG LT+E
Sbjct: 316 EWFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVE 375
Query: 121 TRTKYESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180
T+TK ESVATHLT+DHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK
Sbjct: 376 TKTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 435
Query: 181 LISLLNAYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVS 240
LISLLNAYAVIA GVRF+CTNSAGKN KS+VFKTQGSG IKDNIITVFGMNTFNCLESVS
Sbjct: 436 LISLLNAYAVIARGVRFLCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVS 495
Query: 241 ILISDDCKVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPI 300
IL+SDDCKVEGFVSKSG GSGRN+GDRQFFFVNNRPVDMPKVSKLVNELYK ANSRQYPI
Sbjct: 496 ILLSDDCKVEGFVSKSGQGSGRNMGDRQFFFVNNRPVDMPKVSKLVNELYKGANSRQYPI 555
Query: 301 AIMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTK 360
AI+NFTLPSK+CDVNV PDKRKIFF+DETHILQTLREELLKIYSP NAC+SVNKVEEPT
Sbjct: 556 AILNFTLPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTV 615
Query: 361 QVDSLE-HSDHEKLSM-LSDFSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVL 420
QVDSLE SD+ KL M L FS DGGD +D SH LAD+DDS ++ +E+SSHS EVL
Sbjct: 616 QVDSLELCSDNGKLCMSLEHFSSDGGDLRDASSHQPLADDDDSFNKIKEVEQSSHSTEVL 675
Query: 421 NSDGEENMNRRDFTLRVHGMKKADAL--DQDQHMKTYLGSRKGKLVYPSSPCMTVSGSDT 480
NSD EEN+ R+DF LR+HG KKADAL D DQH +TYL ++K V PSSP + V+G+DT
Sbjct: 676 NSDVEENVTRKDFALRMHGTKKADALLNDHDQHKRTYLSNKKDVHVTPSSPFLCVTGTDT 735
Query: 481 SR-QSSLDKFVSINKRKYETLSAPLSEVPILRNQF-NNQLKKSCAESAAKLSKDVKCTHG 540
SR QSSLDKFV+INKRK ET SAPLSEVP+LRNQF NNQ KKSC + SKD+KCT+G
Sbjct: 736 SRVQSSLDKFVTINKRKIETSSAPLSEVPVLRNQFLNNQRKKSCPDIT---SKDIKCTNG 795
Query: 541 DSQVIEDFFEGNDEDSSIQHKTDRVFSEVGLPKSSEDHSGDEETTQECTEEGIAKV-PPV 600
+ +V +DF GNDEDSSIQ KTDRVFS+VGLP SS DHS D E T+E T E IAKV V
Sbjct: 796 NCRVFDDFSVGNDEDSSIQIKTDRVFSKVGLPPSSADHSDDGEATEEDTGEAIAKVHSSV 855
Query: 601 IESTATPTKDLDIMFNDLPPSNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQR 660
IESTA+PTKDL+I+ DLP I PS ++K SSSP QL+LCSTFHFDF EL+KRR+QR
Sbjct: 856 IESTASPTKDLEIISEDLPLPVCSIQPSGLLKESSSP-QLKLCSTFHFDFHELKKRRIQR 915
Query: 661 QLRFKLNGYTCEQRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRMK 720
QLR+KLNGYTCE++KLK HYAAAT+ LSQPDNEDRKARA+EAAA+EL++LFRK+DF RMK
Sbjct: 916 QLRYKLNGYTCERKKLKCHYAAATVKLSQPDNEDRKARALEAAARELDKLFRKKDFGRMK 975
Query: 721 VIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEV 780
VIGQFNLGFIIGKLDQDLFI+DQHAADEKYNFERLSQSTILNQQPLLRPL LELSAEEEV
Sbjct: 976 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLGLELSAEEEV 1035
Query: 781 VVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGEC 840
VVSIHMDV RKNGFT+EEDPHALPGNRF+LKAVPFSKNITFGVEDVKDLISTLADSEGEC
Sbjct: 1036 VVSIHMDVFRKNGFTIEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGEC 1095
Query: 841 SIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNCP 900
SI+G YRMDTADSVCPSRVRAMLASRACRSSV IGDPLG EMQKILEHLA LKSPWNCP
Sbjct: 1096 SIIGCYRMDTADSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKILEHLAELKSPWNCP 1155
Query: 901 HGRPTMRHLVDLTTIKRLDESDADC 919
HGRPTMRHLVDLTT+KR +E +ADC
Sbjct: 1156 HGRPTMRHLVDLTTVKRSEEQEADC 1176
BLAST of Sed0008302 vs. TAIR 10
Match:
AT4G02460.1 (DNA mismatch repair protein, putative )
HSP 1 Score: 939.9 bits (2428), Expect = 1.6e-273
Identity = 522/923 (56.55%), Postives = 651/923 (70.53%), Query Frame = 0
Query: 9 SPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGEDSFQVIDN 68
SP I+PIN+ V+HRICSGQVILDLSSAVKELVENSLDAGAT IEI+L+DYGED FQVIDN
Sbjct: 14 SPLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDN 73
Query: 69 GSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIETRTKYESV 128
G GISPTNF+VLALKHHTSKL DF DL +L TYGFRGEALSSLC+LGNLT+ETRTK E V
Sbjct: 74 GCGISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPV 133
Query: 129 ATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAY 188
AT LT+DHSGLL AEKKTARQ+GTTV V+KLFSNLPVRSKEF RNIRKEYGKL+SLLNAY
Sbjct: 134 ATLLTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVSLLNAY 193
Query: 189 AVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVSILISDDCK 248
A+IA GVRFVC+N+ GKN KS+V TQG G +KDNIITVFG++TF L+ VSI +S+DC+
Sbjct: 194 ALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVSICVSEDCR 253
Query: 249 VEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLP 308
VEGF+SK G G+GRNL DRQ+FF+N RPVDMPKVSKLVNELYK +SR+YP+ I++F +P
Sbjct: 254 VEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYPVTILDFIVP 313
Query: 309 SKSCDVNVNPDKRKIFFTDETHILQTLREELLKIYSPINACFSVNKVEEPTKQVDSLEHS 368
+CD+NV PDKRK+FF+DET ++ +LRE L +IYS NA + VN+ EE ++Q D S
Sbjct: 314 GGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNASYIVNRFEENSEQPDKAGVS 373
Query: 369 DHEKLSMLSDFSPDGGDHKDVPSHMSLADNDDSLEIVENMEESSHSIEVLNSDGEENMNR 428
+K S L S + D + E +E+ + S+ + D M +
Sbjct: 374 SFQKKSNLL-------------SEGIVLDVSSKTRLGEAIEKENPSLREVEIDNSSPMEK 433
Query: 429 RDFTLRVHGMKKADALDQDQHMKTYLGS--RKGKLVYPSSPCMTVSGSDTS-----RQSS 488
F ++ G KK + H T+L KG + +T + D S QS+
Sbjct: 434 FKFEIKACGTKKGEG-SLSVHDVTHLDKTPSKGLPQLNVTEKVTDASKDLSSRSSFAQST 493
Query: 489 LDKFVSINKRKYETLSAPLSEVPILRNQFNN-QLKKSCAESAAKLSKDVKCTHGDSQVIE 548
L+ FV++ KRK+E +S LSE P+LRNQ ++ +++KS E A S +C
Sbjct: 494 LNTFVTMGKRKHENISTILSETPVLRNQTSSYRVEKSKFEVRALAS---RC--------- 553
Query: 549 DFFEGNDEDSSIQHKTDRV----FSEVGLPKSSEDHSGDEETTQECTEEGIAKVPPVIES 608
EG+ D + K D SE+G S + + E + E+ I P ++
Sbjct: 554 -LVEGDQLDDMVISKEDMTPSERDSELGNRISPGTQADNVERHEREHEKPIRFEEPTSDN 613
Query: 609 TATPTKDLDIMFNDLPP-SNSLIPPSCVMKGSSSPSQLELCSTFHFDFDELRKRRLQRQL 668
T T D++ + D P S L + V+ + + ++ ST F F LR RRL+R
Sbjct: 614 TLT-KGDVERVSEDNPRCSQPLRSVATVLDSPAQSTGPKMFSTLEFSFQNLRTRRLERLS 673
Query: 669 RFKLNGYTCE---QRKLKRHYAAATLVLSQPDNEDRKARAVEAAAKELERLFRKEDFSRM 728
R + GY + + K+ +AAATL LSQPD+E+RKARA+ AA ELERLFRKEDF RM
Sbjct: 674 RLQSTGYVSKCMNTPQPKKCFAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRM 733
Query: 729 KVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSAEEE 788
+V+GQFNLGFII KL++DLFI+DQHAADEK+NFE L++ST+LNQQPLL+PL LELS EEE
Sbjct: 734 QVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEE 793
Query: 789 VVVSIHMDVIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVEDVKDLISTLADSEGE 848
V V +HMD+IR+NGF LEE+P A PG F+L+A+P+SKNITFGVED+KDLISTL D+ GE
Sbjct: 794 VTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGE 853
Query: 849 CSIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQKILEHLAGLKSPWNC 908
CS+ SY+ DS+CPSRVRAMLASRACRSSV IGDPL EMQKI+EHLA L+SPWNC
Sbjct: 854 CSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLADLESPWNC 908
Query: 909 PHGRPTMRHLVDLTTIKRLDESD 916
PHGRPTMRHLVDLTT+ L + D
Sbjct: 914 PHGRPTMRHLVDLTTLLTLPDDD 908
BLAST of Sed0008302 vs. TAIR 10
Match:
AT4G09140.1 (MUTL-homologue 1 )
HSP 1 Score: 164.1 bits (414), Expect = 5.4e-40
Identity = 126/424 (29.72%), Postives = 213/424 (50.24%), Query Frame = 0
Query: 8 DSPTIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGEDSFQVID 67
+ P I+ + + VV+RI +G+VI SAVKELVENSLDA ++ I + +KD G QV D
Sbjct: 25 EPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSD 84
Query: 68 NGSGISPTNFRVLALKHHTSKLSDFPDLQSLGTYGFRGEALSSLCSLGNLTIETRTKYES 127
+G GI + +L +H TSKL+ F DL SL + GFRGEAL+S+ + ++T+ T TK +
Sbjct: 85 DGHGIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQI 144
Query: 128 VATHLTYDHSGLLVAEKKTARQV-GTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLN 187
++Y G++ E K V GT +MV+ LF N+ R K +N +YGK++ LL+
Sbjct: 145 HGYRVSY-RDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKTL-QNSADDYGKIVDLLS 204
Query: 188 AYAVIATGVRFVCTNSAGKNVKSMVFKTQGSGYIKDNIITVFGMNTFNCLESVSILISDD 247
A+ V F C VK+ V + D+I +V+G++ L V + D
Sbjct: 205 RMAIHYNNVSFSCRKHGA--VKADVHSVVSPSRL-DSIRSVYGVSVAKNLMKVEVSSCDS 264
Query: 248 C----KVEGFVSKSGHGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSR-QYPIA 307
+EGF+S S + + + + F+N+R V+ + + + +Y + + P
Sbjct: 265 SGCTFDMEGFISNSNYVAKKTI---LVLFINDRLVECSALKRAIEIVYAATLPKASKPFV 324
Query: 308 IMNFTLPSKSCDVNVNPDKRKIFFTDETHILQTLREEL-LKIYSP-------------IN 367
M+ LP + D+N++P K+++ ++ I++ ++ E+ +K+ + I
Sbjct: 325 YMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTRTFQEQKVEYIQ 384
Query: 368 ACFSVNKVEEPTKQVDSLEHSDH---EKLSMLSDFSPDGGDHKDV-PSHMSLADNDDSLE 408
+ + K + P Q S + + K+ P G H + P SL D SL
Sbjct: 385 STLTSQKSDSPVSQKPSGQKTQKVPVNKMVRTDSSDPAGRLHAFLQPKPQSLPDKVSSLS 440
BLAST of Sed0008302 vs. TAIR 10
Match:
AT4G35520.1 (MUTL protein homolog 3 )
HSP 1 Score: 98.6 bits (244), Expect = 2.8e-20
Identity = 66/193 (34.20%), Postives = 105/193 (54.40%), Query Frame = 0
Query: 11 TIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATCIEISLKDYGEDSFQVIDNGS 70
TIKP+ +GV H + SG ++ D++ V+ELV NSLDAGAT + I + S +V+D+GS
Sbjct: 3 TIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFV-GVVSCSVKVVDDGS 62
Query: 71 GISPTNFRVLALKHHTSKLSDFPDLQSLG-TYGFRGEALSSLCSLGNLTIETR-----TK 130
G+S + +L ++ TSK DF ++++ T+GFRGEAL+S+ + L + T+
Sbjct: 63 GVSRDDLVLLGERYATSKFHDFTNVETASETFGFRGEALASISDISLLEVRTKAIGRPNG 122
Query: 131 YESVATHLTYDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISL 190
Y V H G+ + GTTV V+ LF + PVR K + +K +
Sbjct: 123 YRKVMKGSKCLHLGI----DDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKC 182
Query: 191 LNAYAVIATGVRF 198
+ A++ + V F
Sbjct: 183 VFRIALVHSNVSF 190
HSP 2 Score: 58.5 bits (140), Expect = 3.2e-08
Identity = 54/213 (25.35%), Postives = 86/213 (40.38%), Query Frame = 0
Query: 733 IIDQHAADEKYNFERL-----------------SQSTILNQQPLLRPLRLEL-------- 792
I+DQHAADE+ E L Q +N L+ L L++
Sbjct: 942 IVDQHAADERIRLEELRTKVLAGKARTVTYLSADQELFINDALLIFVLTLKVLPEMGYQL 1001
Query: 793 --SAEEEV-----VVSIHMD---VIRKNGFTLEEDPHALPGNRFKLKAVPFSKNITFGVE 852
S E++ + +I ++ +KN ++ P + L AVP +
Sbjct: 1002 LQSYSEQIRDWGWICNITVEGSTSFKKNMSIIQRKPTPI-----TLNAVPCILGVNLSDV 1061
Query: 853 DVKDLISTLADSEGECSIMGSYRMDTADSVCPSRVRAMLASRACRSSVRIGDPLGIYEMQ 911
D+ + + LAD++G +I P V +L S+ACR ++ GD L E
Sbjct: 1062 DLLEFLQQLADTDGSSTI-------------PPSVLRVLNSKACRGAIMFGDSLLPSECS 1121
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023548504.1 | 0.0e+00 | 84.45 | DNA mismatch repair protein PMS1 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_022954392.1 | 0.0e+00 | 84.32 | DNA mismatch repair protein PMS1 isoform X2 [Cucurbita moschata] | [more] |
KAG6575837.1 | 0.0e+00 | 84.34 | ATPase family AAA domain-containing protein 1, partial [Cucurbita argyrosperma s... | [more] |
XP_022954391.1 | 0.0e+00 | 84.23 | DNA mismatch repair protein PMS1 isoform X1 [Cucurbita moschata] | [more] |
XP_038899185.1 | 0.0e+00 | 83.89 | DNA mismatch repair protein PMS1 isoform X1 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q941I6 | 2.2e-272 | 56.55 | DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana OX=3702 GN=PMS1 PE=1 SV... | [more] |
P54278 | 1.5e-135 | 36.04 | Mismatch repair endonuclease PMS2 OS=Homo sapiens OX=9606 GN=PMS2 PE=1 SV=2 | [more] |
F1NQJ3 | 3.3e-135 | 36.31 | Mismatch repair endonuclease PMS2 OS=Gallus gallus OX=9031 GN=PMS2 PE=2 SV=3 | [more] |
Q54QA0 | 4.2e-130 | 33.98 | Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum OX=44689 GN=pms1 P... | [more] |
P54279 | 4.2e-122 | 35.14 | Mismatch repair endonuclease PMS2 OS=Mus musculus OX=10090 GN=Pms2 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GQV6 | 0.0e+00 | 84.32 | DNA mismatch repair protein PMS1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1GQS5 | 0.0e+00 | 84.23 | DNA mismatch repair protein PMS1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1JMX6 | 0.0e+00 | 83.57 | DNA mismatch repair protein PMS1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1D8M2 | 0.0e+00 | 83.50 | DNA mismatch repair protein PMS1 isoform X1 OS=Momordica charantia OX=3673 GN=LO... | [more] |
A0A5D3D2J3 | 0.0e+00 | 82.05 | Thiamine diphosphokinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |