Sed0008020 (gene) Chayote v1

Overview


Name	Sed0008020
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein MODIFIER OF SNC1 11-like
Location	LG03: 46516047 .. 46519582 (+)
RNA-Seq Expression	Sed0008020
Synteny	Sed0008020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAGTTCAGAAACCTGCGCCATTGTCTTTTTCGCGGCAATTCTCCTCCGTAGCCTTCGTCGTTTCCAACCAGTCTCCGATTAGGGTTCCGGTGCTCAAATCCGCTCCTCCAATGGCGACGGTAGCATCTGCAGGACTCAACGACATTAGTAATAGCAAAAACTCCCTTGGAGAAAACCCTAGCCAAACCCTAGACCCGACCATTTCTTCCTCCGTTCCGCCGTCGTCAACTGATGAGCCCAAGGGCTCTGGTAAGGCGCCGGTTGAAGGGGACGGTGAATTTGTTTCCGATGTCGAGAGGAAAATGCGCCGGGCTGAGCGGTTTGGGATTTCTGTGCAGTTGTCTGAGAAAGAAAAGCGGAATTCTCGAGCAGAACGGTAACGCTCTTTTTTCTTTTGGCTGTTGCTGTTTCTAAACTTGTTGCTTCCTCGTGTTCGTGTTGTTGCGAATTTGAATCCATTTTTCATGCCTTTCTTAGTTGCTATGTTTCATATGATTTATTTTTTTTTAATTTTATGAAACTATATATTTTTCCTTTTATCTTTTTATGGGAAAATGTACCTACAGGTCGCTGGTATAAGTTGTGTGTCAAACTGCCCGAGTAGGGATTCTTACAAACTAAAAAAGTTCAGATATCTTACAAACCATCATGAGTGGTTTTGTGGTCAAGAAAACCTTTTAAGAGTTAACGGCTTTAATTTAGGATGCTCACCTACCCAAGAATTAATTTACTACCGTTTTCTTTGACATTCAAATGTTTTAGATTAGGTTGTATGTCTTGCGTAAAAGCCCGGACAGTTACGGAAAATCGGATATCTTCCATCATAGGTTAGACCCAGTGGTGTTTTTGTGCAGGTATGAGGTCTTTGGGTACTTGTACATTATGATTTGTTGGGTTCATCAGTTCTATTGTCCATATTCTGGCCATGGGTTGAAATTCTACCAGGAATGTTGTAATTTGAGATCCAAAATGATTGCAGTGGCTTATTCATATATATCAAATATCATTGCTTCACTGTTGTATTTTTGTAAAAGAATAAAAGAGGAAAGTTGCAGCCATTTCCTTCTCTGCTATCCCCCTCAAATGAAACTGGGAACCATTTGTTATGCTCTTTCTATGTCTCTCGCTGCTTCCTAATGTGTCTATCAGTGCACGGTACAGCTTAATTCTAGCCCTTCTTTAGTTATAAAGGCCTTGTTGTCTTGTCGTATCTATGGTGTTCTGTGGGAGGCTTGGTTGGATAGAACTACTCAAATCTTCGAAGATAAGTTGAAATTAGGGATATTGTGTGGGAATTGATTCATTGTCGAGCTTATATCGGTGTTCTCTTTCTTCTCGTTTCTATAATTAGAATAATTACCTTGTTTTTTTTTTGTTTTTCCAAGTTCCGTTAAGAGCCATGTTTCTCTTTTCTTTTTCTGTAAAATATTTTTAATGTTGATTTTTTGGGATAATGGCAGGTTTGGTATCTGTACCACAGGAAATGGGATGGGAGCATCAAATAAGTCGGAGGAGGTGAAGAGGAAGGCTAGAGCTGAGAGGTCTGTTCCATGTCTTTATGGATTAATTGGTTTCCACTGTCAGAAAAATTATAGCTATGGACTTTTTTCTTAGTCATTTTTTCTTTGTTGCTAATCTTTTTGGTTATTTAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGACGAAGAAGAAAGCACGTCTTGCTAAGTTTTCATCAACGTCAAAGCCAGACCCCCAGGAGGAAGAAAAGAGGAAGGCAAGGGCTGTCAGGTACTGGGCTTGGGTTTTTTTCTGCTTCCCTGGTTGTAGTTCATTGAAATGCTTTCAGTTCTATCATTTATGGTTCATGGGGACTGTGTATGGAGTGTATAAACATTAGAAATTATGAATGCAAACATATTGTTTGTTTTCTCTTTATTTTCTGGGTGCAGGTTTTCTAATTCAACATTAAACTCTCTTACTCAAGGGGATGGGAAAGGAAACGCTGAGACGGTAATGTTATCTCTTCAAGTTTATTTGCTATCTAGTAGGATTTAGGAAACAGTTGTGTATACTTCTCTCCAATGCTCCTGCTCCCATTGACGATTTCCGTTGTTTGTAATCAGATTGCAGATATTGCAGGCAAGTCTGGAGGTGGTGCCTGAAAAGAACACTCCGTTTCGATGGCTAGTATTTGCTTGTAAATTTTTTTGGTTCGTGTTTTTTAAAATCTGAATGACATTCACCTTATAAAAATTACATCCTATCCAAATCTATAATGTTTCTTGTTATACCTGTATCATTTAATCCGATGATTGATTTCTTTTTATGGCAGGTCTAGTATCTGGTTAGGTTCCCATAATGGCTTCCATACCCATGTGCATTCCTTTATATGATTATGTAGTGCAAAAGTAACATCCATTCTGAGGGCAGATTCATTACTGCAAGGTGCTTTACTAGGCGTTGCTGTGAGACAAGATTCTCTAGTTTCAATTGTGTCAGGATATTAATTATCTGGATAGGTGTTAAAGTAATAGCAAATATACCTCCAAAGTTCAAGCCTATCTTACAGTTTATTAAGAATATCAGAAAATTTTCTGAAGTTTTTAACCCTCCATTGATTTGGTTCTCCTCATCATTTTATATCTTCTTTGTGATCACAAGTTGGATATCCATGATAGCATTTGAACGGCAGTGCTAAGTTTCCATGTGGATTGGTAACATCTGACACTGACTGGTTGAAATTTACTAATTTTGTCAAATTGGGTTTTAGTATTAGTAAAGTTAACGCATCTTGCTTGCATTTCTTTGAGTTTATTATATCGTTAGATTTTTTGAGTTTTCAAACTATAATTTGTTTGGGTTCTTAGCTTCTTGTTCCTATTTAATGGTAGGCTTTTTTTTGGTATCTTGCTGACTGTAATAATGTAGGATTATGGCCAACTCTCAAGAGTCTGATCACAGCTAGCTATTATTCGACCATTTACGATCGAGGTTTGGTCTCTTAGCAGCACATCTCATCATCTCATGGCATCACTTATAATTACTCATCAAGGAAATGATTAGTTTTTATATATAACCTCCAGAATACTATTAAGATTAGAATGGTCATGTGTTGAATGTTATTTAGAACTGCTGTTCAAAATGTCATCATCTCATGAGATTATAGCTCCAACTTGTTTTAGAATAAACTGAAGATAAATCTTGAGAGGGGAAGGAAGTATCGAATCCCCTCGGTAGTGGTTGTGTCGTGTCGGAGAAGCTGAATTCTCTGTTCTAACTTGGGAGTTTCTGATATTCTTGTTTGGTAACGTAGGATAGGCCTAGTCTTTTGGAGGTATATGTTGGTTCTCTTAGAGATATCTGAATGAATTGAGGTCTCTAGCTCAGAATGGATTGAACTCTACATATAGGTTTCCCGTTATGTGTTTGTTATTTCGTTGTTTTTTTTTCTTTATGTATTTAGTCTCTTCTGTATTTTCGGTTGGATTGTAATGGTATGGAAGGACTGCAACGTTTTATATGGAATCGATATTTTGATCAAA

mRNA sequence

TAAAAAGTTCAGAAACCTGCGCCATTGTCTTTTTCGCGGCAATTCTCCTCCGTAGCCTTCGTCGTTTCCAACCAGTCTCCGATTAGGGTTCCGGTGCTCAAATCCGCTCCTCCAATGGCGACGGTAGCATCTGCAGGACTCAACGACATTAGTAATAGCAAAAACTCCCTTGGAGAAAACCCTAGCCAAACCCTAGACCCGACCATTTCTTCCTCCGTTCCGCCGTCGTCAACTGATGAGCCCAAGGGCTCTGGTAAGGCGCCGGTTGAAGGGGACGGTGAATTTGTTTCCGATGTCGAGAGGAAAATGCGCCGGGCTGAGCGGTTTGGGATTTCTGTGCAGTTGTCTGAGAAAGAAAAGCGGAATTCTCGAGCAGAACGGTTTGGTATCTGTACCACAGGAAATGGGATGGGAGCATCAAATAAGTCGGAGGAGGTGAAGAGGAAGGCTAGAGCTGAGAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGACGAAGAAGAAAGCACGTCTTGCTAAGTTTTCATCAACGTCAAAGCCAGACCCCCAGGAGGAAGAAAAGAGGAAGGCAAGGGCTGTCAGGTTTTCTAATTCAACATTAAACTCTCTTACTCAAGGGGATGGGAAAGGAAACGCTGAGACGATTGCAGATATTGCAGGCAAGTCTGGAGGTGGTGCCTGAAAAGAACACTCCGTTTCGATGGTCTAGTATCTGGTTAGGTTCCCATAATGGCTTCCATACCCATGTGCATTCCTTTATATGATTATGTAGTGCAAAAGTAACATCCATTCTGAGGGCAGATTCATTACTGCAAGGTGCTTTACTAGGCGTTGCTGTGAGACAAGATTCTCTAGTTTCAATTGTGTCAGGATATTAATTATCTGGATAGGTGTTAAAGTAATAGCAAATATACCTCCAAAGTTCAAGCCTATCTTACAGTTTATTAAGAATATCAGAAAATTTTCTGAAGTTTTTAACCCTCCATTGATTTGGTTCTCCTCATCATTTTATATCTTCTTTGTGATCACAAGTTGGATATCCATGATAGCATTTGAACGGCAGTGCTAAGTTTCCATGTGGATTGGTAACATCTGACACTGACTGGTTGAAATTTACTAATTTTGTCAAATTGGGTTTTAGTATTAGTAAAGTTAACGCATCTTGCTTGCATTTCTTTGAGTTTATTATATCGTTAGATTTTTTGAGTTTTCAAACTATAATTTGTTTGGGTTCTTAGCTTCTTGTTCCTATTTAATGGTAGGCTTTTTTTTGGTATCTTGCTGACTGTAATAATGTAGGATTATGGCCAACTCTCAAGAGTCTGATCACAGCTAGCTATTATTCGACCATTTACGATCGAGGTTTGGTCTCTTAGCAGCACATCTCATCATCTCATGGCATCACTTATAATTACTCATCAAGGAAATGATTAGTTTTTATATATAACCTCCAGAATACTATTAAGATTAGAATGGTCATGTGTTGAATGTTATTTAGAACTGCTGTTCAAAATGTCATCATCTCATGAGATTATAGCTCCAACTTGTTTTAGAATAAACTGAAGATAAATCTTGAGAGGGGAAGGAAGTATCGAATCCCCTCGGTAGTGGTTGTGTCGTGTCGGAGAAGCTGAATTCTCTGTTCTAACTTGGGAGTTTCTGATATTCTTGTTTGGTAACGTAGGATAGGCCTAGTCTTTTGGAGGTATATGTTGGTTCTCTTAGAGATATCTGAATGAATTGAGGTCTCTAGCTCAGAATGGATTGAACTCTACATATAGGTTTCCCGTTATGTGTTTGTTATTTCGTTGTTTTTTTTTCTTTATGTATTTAGTCTCTTCTGTATTTTCGGTTGGATTGTAATGGTATGGAAGGACTGCAACGTTTTATATGGAATCGATATTTTGATCAAA

Coding sequence (CDS)

ATGGCGACGGTAGCATCTGCAGGACTCAACGACATTAGTAATAGCAAAAACTCCCTTGGAGAAAACCCTAGCCAAACCCTAGACCCGACCATTTCTTCCTCCGTTCCGCCGTCGTCAACTGATGAGCCCAAGGGCTCTGGTAAGGCGCCGGTTGAAGGGGACGGTGAATTTGTTTCCGATGTCGAGAGGAAAATGCGCCGGGCTGAGCGGTTTGGGATTTCTGTGCAGTTGTCTGAGAAAGAAAAGCGGAATTCTCGAGCAGAACGGTTTGGTATCTGTACCACAGGAAATGGGATGGGAGCATCAAATAAGTCGGAGGAGGTGAAGAGGAAGGCTAGAGCTGAGAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGACGAAGAAGAAAGCACGTCTTGCTAAGTTTTCATCAACGTCAAAGCCAGACCCCCAGGAGGAAGAAAAGAGGAAGGCAAGGGCTGTCAGGTTTTCTAATTCAACATTAAACTCTCTTACTCAAGGGGATGGGAAAGGAAACGCTGAGACGATTGCAGATATTGCAGGCAAGTCTGGAGGTGGTGCCTGA

Protein sequence

MATVASAGLNDISNSKNSLGENPSQTLDPTISSSVPPSSTDEPKGSGKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSEEVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNSLTQGDGKGNAETIADIAGKSGGGA

Homology

[Close]

BLAST of Sed0008020 vs. NCBI nr
Match: XP_038882639.1 (protein MODIFIER OF SNC1 11 [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 6.7e-72
Identity = 165/204 (80.88%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVASAGLNDISNSK+ LGENPSQTLDPTISS      SVP SST        DE KGS
Sbjct: 1   MATVASAGLNDISNSKSPLGENPSQTLDPTISSSAQPPASVPSSSTDGGSSKDRDESKGS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
           GKA VEGDG  VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ T  NG+GASNK+E
Sbjct: 61  GKASVEGDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTATNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGLSASVTTDDE KKKARLA+FSSTSKPDPQEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
            TQ DGKGN ETIAD+AGK+GGGA
Sbjct: 181 PTQMDGKGNVETIADVAGKAGGGA 204

[Close]

BLAST of Sed0008020 vs. NCBI nr
Match: XP_022977777.1 (protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977779.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 3.3e-71
Identity = 165/204 (80.88%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVASAG+NDISNSKNSLGENPSQTLDPTISS      SVP SST        DE KGS
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
            K  VEGDGE VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGL ASV TDDE KKKARL +FSSTSKPD QEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           LTQ DGKGN ETIADIAGK+GGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Sed0008020 vs. NCBI nr
Match: XP_022949856.1 (protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949858.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >KAG6603695.1 Protein MODIFIER OF SNC1 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033871.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 164/204 (80.39%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVASAG+NDISNSKN LGENPSQTLDPTISS      SVP SST        DE KGS
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
            K  VEGDGE VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGL ASV TDDE KKKARL +FSSTSKPD QEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           LTQ DGKGN ETIADIAGK+GGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Sed0008020 vs. NCBI nr
Match: XP_023543781.1 (protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo] >XP_023543782.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 2.8e-70
Identity = 163/204 (79.90%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVAS+G+NDISNSKN LGENPSQTLDPTISS      SVP SST        DE KGS
Sbjct: 1   MATVASSGINDISNSKNPLGENPSQTLDPTISSSAQPPASVPLSSTDGESSKEGDESKGS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
            K  VEGDGE VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGL ASV TDDE KKKARL +FSSTSKPD QEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNLTSNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           LTQ DGKGN ETIADIAGK+GGGA
Sbjct: 181 LTQEDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Sed0008020 vs. NCBI nr
Match: XP_008447291.1 (PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo] >KAA0047316.1 protein MODIFIER OF SNC1 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-70
Identity = 162/204 (79.41%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVA AGLNDISNSKN LGENPSQTL+PTISS      SVPPSST        DE K S
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
           GK     DG  VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNK+E
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGLSASVTTDDE KKKARLA+FSSTSKPDPQEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           +TQ DGKGN ETIAD+AGKSGGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Sed0008020 vs. ExPASy Swiss-Prot
Match: Q9LZ08 (Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.1e-24
Identity = 70/122 (57.38%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 45  GSGKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTG--NGMGAS 104
           GS      GD   V D+++K+RRAERFG+SV+L+E+EKRNSRAERFG       NG   +
Sbjct: 65  GSTAGVDSGDISPVDDIQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGT 124

Query: 105 NKSEEVKRKARAERFGL-SASVTTD---DETKKKARLAKFSSTSKPDPQEEEKRKARAVR 161
            K+EE+KRKARA+RFG+ SA+ TTD   +E KKKARLA+F   +K D  EE KRKARA+R
Sbjct: 125 KKAEELKRKARADRFGVPSATSTTDKTEEEAKKKARLARFGKETKVDSAEENKRKARALR 184

[Close]

BLAST of Sed0008020 vs. ExPASy TrEMBL
Match: A0A6J1IR28 (protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71
Identity = 165/204 (80.88%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVASAG+NDISNSKNSLGENPSQTLDPTISS      SVP SST        DE KGS
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
            K  VEGDGE VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGL ASV TDDE KKKARL +FSSTSKPD QEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           LTQ DGKGN ETIADIAGK+GGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Sed0008020 vs. ExPASy TrEMBL
Match: A0A6J1GD78 (protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.1e-71
Identity = 164/204 (80.39%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVASAG+NDISNSKN LGENPSQTLDPTISS      SVP SST        DE KGS
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
            K  VEGDGE VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGL ASV TDDE KKKARL +FSSTSKPD QEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           LTQ DGKGN ETIADIAGK+GGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Sed0008020 vs. ExPASy TrEMBL
Match: A0A5A7TZD8 (Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001340 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70
Identity = 162/204 (79.41%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVA AGLNDISNSKN LGENPSQTL+PTISS      SVPPSST        DE K S
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
           GK     DG  VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNK+E
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGLSASVTTDDE KKKARLA+FSSTSKPDPQEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           +TQ DGKGN ETIAD+AGKSGGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Sed0008020 vs. ExPASy TrEMBL
Match: A0A1S3BHQ8 (protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70
Identity = 162/204 (79.41%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVA AGLNDISNSKN LGENPSQTL+PTISS      SVPPSST        DE K S
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
           GK     DG  VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNK+E
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGLSASVTTDDE KKKARLA+FSSTSKPDPQEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           +TQ DGKGN ETIAD+AGKSGGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Sed0008020 vs. ExPASy TrEMBL
Match: A0A0A0L0R4 (Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293070 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.0e-70
Identity = 162/204 (79.41%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNSLGENPSQTLDPTISS------SVPPSST--------DEPKGS 60
           MATVA AGLNDISNSKN LGENPSQTL+ TISS      SVPPSST        DE K +
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  GKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTGNGMGASNKSE 120
           GK   E DG  VSDV+RKMRRAERFGISVQLSE+EKRNSRAERFG+ TT NG+GASNK+E
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDETKKKARLAKFSSTSKPDPQEEEKRKARAVRFSNSTLNS 180
           EVKRKARAERFGLSASVTTDDE KKKARLA+FSSTSKPDPQEEEKRKARA+RFSN T NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQGDGKGNAETIADIAGKSGGGA 191
           LTQ DGKGN ETIAD+AGKSGGGA
Sbjct: 181 LTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Sed0008020 vs. TAIR 10
Match: AT5G02770.1 (unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 5.0e-25
Identity = 70/122 (57.38%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 45  GSGKAPVEGDGEFVSDVERKMRRAERFGISVQLSEKEKRNSRAERFGICTTG--NGMGAS 104
           GS      GD   V D+++K+RRAERFG+SV+L+E+EKRNSRAERFG       NG   +
Sbjct: 65  GSTAGVDSGDISPVDDIQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGT 124

Query: 105 NKSEEVKRKARAERFGL-SASVTTD---DETKKKARLAKFSSTSKPDPQEEEKRKARAVR 161
            K+EE+KRKARA+RFG+ SA+ TTD   +E KKKARLA+F   +K D  EE KRKARA+R
Sbjct: 125 KKAEELKRKARADRFGVPSATSTTDKTEEEAKKKARLARFGKETKVDSAEENKRKARALR 184

The following BLAST results are available for this feature:

BLAST of Sed0008020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882639.1	6.7e-72	80.88	protein MODIFIER OF SNC1 11 [Benincasa hispida]	[more]
XP_022977777.1	3.3e-71	80.88	protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODI...	[more]
XP_022949856.1	1.3e-70	80.39	protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MO...	[more]
XP_023543781.1	2.8e-70	79.90	protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo] >XP_023543782.1 pr...	[more]
XP_008447291.1	6.3e-70	79.41	PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo] >KAA0047316.1 protein...	[more]

BLAST of Sed0008020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ08	7.1e-24	57.38	Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1	[more]

BLAST of Sed0008020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IR28	1.6e-71	80.88	protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=...	[more]
A0A6J1GD78	6.1e-71	80.39	protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 P...	[more]
A0A5A7TZD8	3.0e-70	79.41	Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BHQ8	3.0e-70	79.41	protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV...	[more]
A0A0A0L0R4	4.0e-70	79.41	Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G29307...	[more]

BLAST of Sed0008020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02770.1	5.0e-25	57.38	unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040746	THO1_MOS11, C-terminal domain	PFAM	PF18592	Tho1_MOS11_C	coord: 59..91 e-value: 1.4E-10 score: 41.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 6..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..173
IPR044209	Protein MODIFIER OF SNC1 11	PANTHER	PTHR47701	PROTEIN MODIFIER OF SNC1 11	coord: 41..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008020.1	Sed0008020.1	mRNA
Sed0008020.2	Sed0008020.2	mRNA
Sed0008020.3	Sed0008020.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0005634	nucleus