
Sed0008001 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATGGAAAATCCAATGAAGAAAAGATTTGATGAATTGATGGGTGTCGCTGAAAAGAAAGAGGAGGATTTGCGTTACCACGAGACTAAAGCTCAAAACACAGCCATGGCGTACCTTATCTGGGAGAGGATCCTTGCTTTTGGTATGCCTCACTATTATAATTCTTCGGCCCTCACGATCACTTGCTCGCATTATCGGTGGATGTTTTTCGGTTTCAGCCTTTCCTGCACTTCTCTCTACTTGTTGTTTTTCCTTAAGGCTGTCATCATGTTCTATCGAGCTCATAACCACTTGGTGAGGATTTCCAATGAACAGATCCGGATCTCCCAACGGATCAATGGATTATATGGGGTGGATTACAGTATCCAGGTGCAGGTATATGAGTACCATCCATTTCAAAGGATGCTTTATATTCTCTTCACTCTCTCGGCTCTACTTGCTGTTACTTCATTTCAGCTCTATACCCTTTACTATACTCTTTGTAACTGA ATGGATATGGAAAATCCAATGAAGAAAAGATTTGATGAATTGATGGGTGTCGCTGAAAAGAAAGAGGAGGATTTGCGTTACCACGAGACTAAAGCTCAAAACACAGCCATGGCGTACCTTATCTGGGAGAGGATCCTTGCTTTTGGTATGCCTCACTATTATAATTCTTCGGCCCTCACGATCACTTGCTCGCATTATCGGTGGATGTTTTTCGGTTTCAGCCTTTCCTGCACTTCTCTCTACTTGTTGTTTTTCCTTAAGGCTGTCATCATGTTCTATCGAGCTCATAACCACTTGGTGAGGATTTCCAATGAACAGATCCGGATCTCCCAACGGATCAATGGATTATATGGGGTGGATTACAGTATCCAGGTGCAGCTCTATACCCTTTACTATACTCTTTGTAACTGA ATGGATATGGAAAATCCAATGAAGAAAAGATTTGATGAATTGATGGGTGTCGCTGAAAAGAAAGAGGAGGATTTGCGTTACCACGAGACTAAAGCTCAAAACACAGCCATGGCGTACCTTATCTGGGAGAGGATCCTTGCTTTTGGTATGCCTCACTATTATAATTCTTCGGCCCTCACGATCACTTGCTCGCATTATCGGTGGATGTTTTTCGGTTTCAGCCTTTCCTGCACTTCTCTCTACTTGTTGTTTTTCCTTAAGGCTGTCATCATGTTCTATCGAGCTCATAACCACTTGGTGAGGATTTCCAATGAACAGATCCGGATCTCCCAACGGATCAATGGATTATATGGGGTGGATTACAGTATCCAGGTGCAGCTCTATACCCTTTACTATACTCTTTGTAACTGA MDMENPMKKRFDELMGVAEKKEEDLRYHETKAQNTAMAYLIWERILAFGMPHYYNSSALTITCSHYRWMFFGFSLSCTSLYLLFFLKAVIMFYRAHNHLVRISNEQIRISQRINGLYGVDYSIQVQLYTLYYTLCN Homology
BLAST of Sed0008001 vs. NCBI nr
Match: KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.1 bits (261), Expect = 4.7e-19 Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of Sed0008001 vs. NCBI nr
Match: XP_011654636.1 (uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetical protein Csa_000251 [Cucumis sativus]) HSP 1 Score: 104.8 bits (260), Expect = 6.2e-19 Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Sed0008001 vs. NCBI nr
Match: ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-18 Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Sed0008001 vs. NCBI nr
Match: XP_008437551.1 (PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo]) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-18 Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Sed0008001 vs. NCBI nr
Match: KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 103.2 bits (256), Expect = 1.8e-18 Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = 0
BLAST of Sed0008001 vs. ExPASy TrEMBL
Match: A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.3e-19 Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of Sed0008001 vs. ExPASy TrEMBL
Match: A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 3.0e-19 Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Sed0008001 vs. ExPASy TrEMBL
Match: E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.6e-19 Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Sed0008001 vs. ExPASy TrEMBL
Match: A0A1S3ATY9 (uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.6e-19 Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Sed0008001 vs. ExPASy TrEMBL
Match: A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 8.7e-19 Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|