Sed0007999 (gene) Chayote v1

Overview


Name	Sed0007999
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L3
Location	LG11: 32626925 .. 32629505 (+)
RNA-Seq Expression	Sed0007999
Synteny	Sed0007999

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGCTTCTCACAAATATTGTCACCTATATATTACGATATCTAGGGTTTTTCATCTTCCTGGAGCAGTTGCAGTAGCCGCAGGCAAAGCACGGGTTCGTTCGCTTCTTCTTTTTTTCTGTCTCCTTCGTAACCCTAATTATATCGTCTTTGCTATGAAGATTTGTTATCGATAACTAGTCTGTAATTTGTTCTATGGTTGTGCTTTCATGAAAATGGAAGTTATTTGATTGTTTTTGTGAACATCAGTCTCTGTTTCTTGCCATTTTCCCGTTTGGTTTCTGTTAAGGTGTGTGTTCTTTGCTGAGTGATCTCTAGTTAACGTATTTCGTGATGTATAGGTCTTTTTGTTGATATGACAATGATGATTTTGTAATGTGGATGAACTCATCAAAACTGTTTTTGACTTAAATTTTTCTGTTGAAAAGTATTCGATGTAGTTTAGATTCGTTTACTTGGAGGAGTCTTTTTTACTTCAGATTAGAAACAAGTTCGATTTTGGATTATTTTATTGGAATTGTTTGTTCTAATTTTTCTTTCGACTTATTGGTTAGTGTTTATTAAACATGTTTCTTTGTATTGATTGAATGTATGTTTCTCTGTGAAGGAAGAAGAGAATGTCTCACAGGAAATTCGAGCACCCAAGGCACGGTTCCCTTGGATTTCTTCCAAGGAAACGAGCAGCTCGTCACCGTGGAAAAGGTATTATTTTTGGGTTTTGATTTTCTTTAGAGCATTACATTTAAATCAATCCCTCTTGGTAGGAACAACTTAAGGGGCATATTGTTGGCCATATCTAGTTTGCTTCTTTCTTAAGGGTTTTTGAACGATGAAATTCTTTGTTTTGACTAATTTATCCGAATCATGTTAATCCTACATTCAACTGTGATTATTTACTAATGTCTTACTTCAGACATTCGCAACACGTTAATATTTTTCATTTTTCTTTTGTTAACGAAAGCTTAGTTATTCATTTGATTTCTAACTTTCAGTGAAGGCTTTCCCCAAGGATGATGCCAGCAAGCCATGCAGGTTGACTGCCTTTCTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTCGAGAAGCCAGGATCCAGTGCGTATTGCTTTGAATTCATCTGGATGCCCTGTTTGCCTTAAATTCATTTTCTTTTGTCAAGCTTACATTTAGTTCTTACTTTATACTTTTTTTTCGTGTTTACTTTGTAGAGCTTCACAAGAAGGAAACTTGTGAGCCTGTGACTATCATTGAGACCCCTCCAATGGTCATTGTTGGTGTTGTTGGATATGTGAAGACCCCACGTGGTCTTCGCTCTCTGCGCACCGTTTGGGCTCAGCATTTGAGTGAGGAAGTAAGGAGGAGATTCTATAAGAACTGGTGCAAGTCTAAGAAGAAGGCTTTCACCAAATACTCAAAGCAATATGAAACTGATGAGGGTAAGAAGAGCATCCATGAGAAGCTTGAGAAGCTGAAGAAATATGCAACTGTGATCCGTGTCTTGGCTCATACTCAGGTAATGAAATGGAAGTGAATGAAAATTCGGTGTTTATGTATATTACAGAAAAATAATTTGACTTGCTGGCTAGTTTTATTATTACAAATCAAAGGAATGTTAATTGGAATTCTGTATTGTAGATTACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACATCTGATGGAGATCCAGGTCAATGGTGGTACTATTGCCCAGAAGGTCGACTATGCCTACGGGTTCTTTGAGAAGCAAGTTCCAGTCGAAGCCGTTTTCCAGAAGGATGAGATGATCGACCTTATTGGTGTGACGAAGGGTAAAGGTTATGAAGGCGTTGTCACTCGATGGGGTGTTACCCGTCTGCCCCGTAAGACTCACAGGGGTCTTAGGAAGGTTGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTGTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCACCACCGAACTGAAATGAACAAAAAGGTCTACAGAGTTGGGAAGGTAGGGCAGGAAGCACATACTGCTATCACCGAATTCGACAGGTTAGCCAGCTTGCACGAGTTTTTAAAGGAATTTGATTGTATCTTTTTTTTTAAATATAAGCTCTTTAATTTGCTGCCATTATTATTGTGAAACAGGACTGAAAAGGAGATTACTCCAATGGGTGGTTTCCCCCATTATGGTATTGTGAAGAGTGACTACTTGATGATCAAGGGAGGCTGCGTTGGACCGAAGAAGAGGGTCATTACCCTTCGCCAGTCTCTTCTCAAGCAAACTTCTCGAGTGGCTCTTGAGGAGATTAAGCTCAAGTTCATCGATACATCCTCCAAGTTCGGCCATGGTCGCTTCCAGACAACACAGGAGAAACAGAAGTTCTATGGTCGTGTCAAGGCTTAAGTTTAGCAGCCTTCCCCTATCCATCCTTGTTCTGGTTGTTTCATGAATTTTTGTTATTTATTTCTGTTATTTGAGGATTATTCCAAGTTGAAACTTGAAATTTTGAACTTTAGTTTGCTATTAATCGAATCTAATTTCACATTCTATCCGGTATTTTGTGAAGCCTGTTCTATAA

mRNA sequence

GGGGCTTCTCACAAATATTGTCACCTATATATTACGATATCTAGGGTTTTTCATCTTCCTGGAGCAGTTGCAGTAGCCGCAGGCAAAGCACGGGAAGAAGAGAATGTCTCACAGGAAATTCGAGCACCCAAGGCACGGTTCCCTTGGATTTCTTCCAAGGAAACGAGCAGCTCGTCACCGTGGAAAAGTGAAGGCTTTCCCCAAGGATGATGCCAGCAAGCCATGCAGGTTGACTGCCTTTCTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTCGAGAAGCCAGGATCCAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTGACTATCATTGAGACCCCTCCAATGGTCATTGTTGGTGTTGTTGGATATGTGAAGACCCCACGTGGTCTTCGCTCTCTGCGCACCGTTTGGGCTCAGCATTTGAGTGAGGAAGTAAGGAGGAGATTCTATAAGAACTGGTGCAAGTCTAAGAAGAAGGCTTTCACCAAATACTCAAAGCAATATGAAACTGATGAGGGTAAGAAGAGCATCCATGAGAAGCTTGAGAAGCTGAAGAAATATGCAACTGTGATCCGTGTCTTGGCTCATACTCAGATTACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACATCTGATGGAGATCCAGGTCAATGGTGGTACTATTGCCCAGAAGGTCGACTATGCCTACGGGTTCTTTGAGAAGCAAGTTCCAGTCGAAGCCGTTTTCCAGAAGGATGAGATGATCGACCTTATTGGTGTGACGAAGGGTAAAGGTTATGAAGGCGTTGTCACTCGATGGGGTGTTACCCGTCTGCCCCGTAAGACTCACAGGGGTCTTAGGAAGGTTGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTGTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCACCACCGAACTGAAATGAACAAAAAGGTCTACAGAGTTGGGAAGGTAGGGCAGGAAGCACATACTGCTATCACCGAATTCGACAGGACTGAAAAGGAGATTACTCCAATGGGTGGTTTCCCCCATTATGGTATTGTGAAGAGTGACTACTTGATGATCAAGGGAGGCTGCGTTGGACCGAAGAAGAGGGTCATTACCCTTCGCCAGTCTCTTCTCAAGCAAACTTCTCGAGTGGCTCTTGAGGAGATTAAGCTCAAGTTCATCGATACATCCTCCAAGTTCGGCCATGGTCGCTTCCAGACAACACAGGAGAAACAGAAGTTCTATGGTCGTGTCAAGGCTTAAGTTTAGCAGCCTTCCCCTATCCATCCTTGTTCTGGTTGTTTCATGAATTTTTGTTATTTATTTCTGTTATTTGAGGATTATTCCAAGTTGAAACTTGAAATTTTGAACTTTAGTTTGCTATTAATCGAATCTAATTTCACATTCTATCCGGTATTTTGTGAAGCCTGTTCTATAA

Coding sequence (CDS)

ATGTCTCACAGGAAATTCGAGCACCCAAGGCACGGTTCCCTTGGATTTCTTCCAAGGAAACGAGCAGCTCGTCACCGTGGAAAAGTGAAGGCTTTCCCCAAGGATGATGCCAGCAAGCCATGCAGGTTGACTGCCTTTCTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTCGAGAAGCCAGGATCCAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTGACTATCATTGAGACCCCTCCAATGGTCATTGTTGGTGTTGTTGGATATGTGAAGACCCCACGTGGTCTTCGCTCTCTGCGCACCGTTTGGGCTCAGCATTTGAGTGAGGAAGTAAGGAGGAGATTCTATAAGAACTGGTGCAAGTCTAAGAAGAAGGCTTTCACCAAATACTCAAAGCAATATGAAACTGATGAGGGTAAGAAGAGCATCCATGAGAAGCTTGAGAAGCTGAAGAAATATGCAACTGTGATCCGTGTCTTGGCTCATACTCAGATTACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACATCTGATGGAGATCCAGGTCAATGGTGGTACTATTGCCCAGAAGGTCGACTATGCCTACGGGTTCTTTGAGAAGCAAGTTCCAGTCGAAGCCGTTTTCCAGAAGGATGAGATGATCGACCTTATTGGTGTGACGAAGGGTAAAGGTTATGAAGGCGTTGTCACTCGATGGGGTGTTACCCGTCTGCCCCGTAAGACTCACAGGGGTCTTAGGAAGGTTGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTGTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCACCACCGAACTGAAATGAACAAAAAGGTCTACAGAGTTGGGAAGGTAGGGCAGGAAGCACATACTGCTATCACCGAATTCGACAGGACTGAAAAGGAGATTACTCCAATGGGTGGTTTCCCCCATTATGGTATTGTGAAGAGTGACTACTTGATGATCAAGGGAGGCTGCGTTGGACCGAAGAAGAGGGTCATTACCCTTCGCCAGTCTCTTCTCAAGCAAACTTCTCGAGTGGCTCTTGAGGAGATTAAGCTCAAGTTCATCGATACATCCTCCAAGTTCGGCCATGGTCGCTTCCAGACAACACAGGAGAAACAGAAGTTCTATGGTCGTGTCAAGGCTTAA

Protein sequence

MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAITEFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRVKA

Homology

[Close]

BLAST of Sed0007999 vs. NCBI nr
Match: XP_022932821.1 (60S ribosomal protein L3 [Cucurbita moschata] >XP_022932822.1 60S ribosomal protein L3 [Cucurbita moschata] >XP_022974021.1 60S ribosomal protein L3 [Cucurbita maxima] >XP_022974022.1 60S ribosomal protein L3 [Cucurbita maxima] >KAG6592264.1 60S ribosomal protein L3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025107.1 60S ribosomal protein L3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 771.9 bits (1992), Expect = 2.6e-219
Identity = 380/389 (97.69%), Postives = 386/389 (99.23%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYE+DEGKK+I EKLEKLKKY+TVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQEAHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Sed0007999 vs. NCBI nr
Match: KAG6607562.1 (Cellulose synthase A catalytic subunit 6 [UDP-forming]-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 771.9 bits (1992), Expect = 2.6e-219
Identity = 380/389 (97.69%), Postives = 385/389 (98.97%), Query Frame = 0


Query: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1052 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 1111

Query: 61   EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
            EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 1112 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 1171

Query: 121  NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
            NWCKSKKKAFTKYSKQYETDEGKKSI EKLEKLKKYA+VIRVLAHTQITKMKGLKQKKAH
Sbjct: 1172 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 1231

Query: 181  LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
            +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 1232 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 1291

Query: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQE HTAIT
Sbjct: 1292 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 1351

Query: 301  EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
            EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 1352 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 1411

Query: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
            KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 1412 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 1440

[Close]

BLAST of Sed0007999 vs. NCBI nr
Match: XP_022932508.1 (60S ribosomal protein L3 [Cucurbita moschata] >XP_023525120.1 60S ribosomal protein L3 [Cucurbita pepo subsp. pepo] >KAG7037195.1 60S ribosomal protein L3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 771.9 bits (1992), Expect = 2.6e-219
Identity = 380/389 (97.69%), Postives = 385/389 (98.97%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYETDEGKKSI EKLEKLKKYA+VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQE HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Sed0007999 vs. NCBI nr
Match: XP_022972942.1 (60S ribosomal protein L3-like [Cucurbita maxima])

HSP 1 Score: 769.2 bits (1985), Expect = 1.7e-218
Identity = 379/389 (97.43%), Postives = 384/389 (98.71%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYETDEGKKSI EKLEKLKKYA+VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQE HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTT EKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTLEKQKFYGRVKA 389

[Close]

BLAST of Sed0007999 vs. NCBI nr
Match: XP_023514600.1 (60S ribosomal protein L3-like [Cucurbita pepo subsp. pepo] >XP_023514601.1 60S ribosomal protein L3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 768.8 bits (1984), Expect = 2.2e-218
Identity = 378/389 (97.17%), Postives = 385/389 (98.97%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYE+DEGKK+I EKLEKLKKY+TVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQEAHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTT EKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTHEKQKFYGRVKA 389

[Close]

BLAST of Sed0007999 vs. ExPASy Swiss-Prot
Match: P35684 (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 SV=2)

HSP 1 Score: 704.5 bits (1817), Expect = 6.6e-202
Identity = 334/389 (85.86%), Postives = 369/389 (94.86%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FPKDD SKPC LT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+VIVG+V YVKTPRGLRSL +VWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKY+ +Y++D GKK I  +LEK+KKYA+++RV+AHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQ+NGGTIA KVDY Y FFEK++PV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYG+VK DYLMIKG CVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTT EKQ+F+G++KA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389

[Close]

BLAST of Sed0007999 vs. ExPASy Swiss-Prot
Match: P17094 (60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5)

HSP 1 Score: 699.1 bits (1803), Expect = 2.8e-200
Identity = 335/387 (86.56%), Postives = 365/387 (94.32%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLRSL TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY++++GKK I  +LEK+KKYATVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+YR+GKVG EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Sed0007999 vs. ExPASy Swiss-Prot
Match: P22738 (60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4)

HSP 1 Score: 696.4 bits (1796), Expect = 1.8e-199
Identity = 336/386 (87.05%), Postives = 365/386 (94.56%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPPMV+VGVVGYVKTPRGLRSL TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT+YSK++ET+EGKK I  +LEK+KKY +VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGG IA+KVDYA   FEKQVPV+A+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYRVGKVGQE H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK+ITPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQ+LLKQTSR+A+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGR 387
           KFID +S  GHGRFQT+QEK KFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of Sed0007999 vs. ExPASy Swiss-Prot
Match: P36584 (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl302 PE=3 SV=2)

HSP 1 Score: 544.3 bits (1401), Expect = 1.1e-153
Identity = 269/388 (69.33%), Postives = 322/388 (82.99%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSH KFE PRHGSLGFLPRKRA+R RGKVKAFPKDDASKP  LTAFLGYKAGMTHIVR++
Sbjct: 1   MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           ++PGSK+HK+E  E VTIIETPPMV+VGVVGYV+TPRGLRSL TVWA+HLSEEV+RRFYK
Sbjct: 61  DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFTKY+K+Y   E  +SI+ +LE++KKY +V+RVLAHTQI K   L QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG++A KV++A   FEK V +++ F+++EMID+IGVT+GKG EG   RWG  R
Sbjct: 181 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+YR+G  G +A  A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           +FD TEK ITPMGGF  YG+V++D++M+ G   GP KRV+TLR+SLL  TSR ALE + L
Sbjct: 301 DFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVK 389
           K+IDT+SKFGHGRFQT  E ++F G +K
Sbjct: 361 KWIDTASKFGHGRFQTPAEAKQFLGTLK 384

[Close]

BLAST of Sed0007999 vs. ExPASy Swiss-Prot
Match: P40372 (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl301 PE=1 SV=2)

HSP 1 Score: 543.9 bits (1400), Expect = 1.5e-153
Identity = 268/388 (69.07%), Postives = 322/388 (82.99%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSH KFE PRHGSLGFLPRKRA+R RGKVKAFPKDDASKP  LTAFLGYKAGMTHIVR++
Sbjct: 1   MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           ++PGSK+HK+E  E VT+IETPPMV+VGVVGYV+TPRGLRSL TVWA+HLSEEV+RRFYK
Sbjct: 61  DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFTKY+K+Y   E  +SI+ +LE++KKY +V+RVLAHTQI K   L QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG++A KV++A   FEK V +++ F+++EMID+IGVT+GKG EG   RWG  R
Sbjct: 181 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+YR+G  G +A  A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           +FD TEK ITPMGGF  YG+V++D++M+ G   GP KRV+TLR+SLL  TSR ALE + L
Sbjct: 301 DFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVK 389
           K+IDT+SKFGHGRFQT  E ++F G +K
Sbjct: 361 KWIDTASKFGHGRFQTPAEAKQFLGTLK 384

[Close]

BLAST of Sed0007999 vs. ExPASy TrEMBL
Match: A0A6J1IA92 (60S ribosomal protein L3 OS=Cucurbita maxima OX=3661 GN=LOC111472643 PE=3 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 1.2e-219
Identity = 380/389 (97.69%), Postives = 386/389 (99.23%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYE+DEGKK+I EKLEKLKKY+TVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQEAHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Sed0007999 vs. ExPASy TrEMBL
Match: A0A6J1EXU7 (60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111439281 PE=3 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 1.2e-219
Identity = 380/389 (97.69%), Postives = 386/389 (99.23%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYE+DEGKK+I EKLEKLKKY+TVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQEAHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Sed0007999 vs. ExPASy TrEMBL
Match: A0A6J1F1X0 (60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111438907 PE=3 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 1.2e-219
Identity = 380/389 (97.69%), Postives = 385/389 (98.97%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYETDEGKKSI EKLEKLKKYA+VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQE HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Sed0007999 vs. ExPASy TrEMBL
Match: A0A6J1I663 (60S ribosomal protein L3-like OS=Cucurbita maxima OX=3661 GN=LOC111471447 PE=3 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 8.0e-219
Identity = 379/389 (97.43%), Postives = 384/389 (98.71%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYETDEGKKSI EKLEKLKKYA+VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YRVGK GQE HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTT EKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTLEKQKFYGRVKA 389

[Close]

BLAST of Sed0007999 vs. ExPASy TrEMBL
Match: A0A0A0KAJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014790 PE=3 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 4.4e-217
Identity = 374/389 (96.14%), Postives = 385/389 (98.97%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYETDEGKK+I EKLEKLKKYA+VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY++GK GQE+HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKF+GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]

BLAST of Sed0007999 vs. TAIR 10
Match: AT1G43170.1 (ribosomal protein 1 )

HSP 1 Score: 699.1 bits (1803), Expect = 2.0e-201
Identity = 335/387 (86.56%), Postives = 365/387 (94.32%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLRSL TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY++++GKK I  +LEK+KKYATVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+YR+GKVG EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Sed0007999 vs. TAIR 10
Match: AT1G43170.2 (ribosomal protein 1 )

HSP 1 Score: 699.1 bits (1803), Expect = 2.0e-201
Identity = 335/387 (86.56%), Postives = 365/387 (94.32%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLRSL TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY++++GKK I  +LEK+KKYATVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+YR+GKVG EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Sed0007999 vs. TAIR 10
Match: AT1G43170.3 (ribosomal protein 1 )

HSP 1 Score: 699.1 bits (1803), Expect = 2.0e-201
Identity = 335/387 (86.56%), Postives = 365/387 (94.32%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLRSL TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY++++GKK I  +LEK+KKYATVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+YR+GKVG EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Sed0007999 vs. TAIR 10
Match: AT1G43170.5 (ribosomal protein 1 )

HSP 1 Score: 699.1 bits (1803), Expect = 2.0e-201
Identity = 335/387 (86.56%), Postives = 365/387 (94.32%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLRSL TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY++++GKK I  +LEK+KKYATVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+YR+GKVG EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Sed0007999 vs. TAIR 10
Match: AT1G43170.6 (ribosomal protein 1 )

HSP 1 Score: 699.1 bits (1803), Expect = 2.0e-201
Identity = 335/387 (86.56%), Postives = 365/387 (94.32%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRSLRTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLRSL TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYETDEGKKSIHEKLEKLKKYATVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY++++GKK I  +LEK+KKYATVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYRVGKVGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+YR+GKVG EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

The following BLAST results are available for this feature:

BLAST of Sed0007999 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932821.1	2.6e-219	97.69	60S ribosomal protein L3 [Cucurbita moschata] >XP_022932822.1 60S ribosomal prot...	[more]
KAG6607562.1	2.6e-219	97.69	Cellulose synthase A catalytic subunit 6 [UDP-forming]-like protein, partial [Cu...	[more]
XP_022932508.1	2.6e-219	97.69	60S ribosomal protein L3 [Cucurbita moschata] >XP_023525120.1 60S ribosomal prot...	[more]
XP_022972942.1	1.7e-218	97.43	60S ribosomal protein L3-like [Cucurbita maxima]	[more]
XP_023514600.1	2.2e-218	97.17	60S ribosomal protein L3-like [Cucurbita pepo subsp. pepo] >XP_023514601.1 60S r...	[more]

BLAST of Sed0007999 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35684	6.6e-202	85.86	60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 S...	[more]
P17094	2.8e-200	86.56	60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5	[more]
P22738	1.8e-199	87.05	60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4	[more]
P36584	1.1e-153	69.33	60S ribosomal protein L3-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]
P40372	1.5e-153	69.07	60S ribosomal protein L3-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]

BLAST of Sed0007999 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IA92	1.2e-219	97.69	60S ribosomal protein L3 OS=Cucurbita maxima OX=3661 GN=LOC111472643 PE=3 SV=1	[more]
A0A6J1EXU7	1.2e-219	97.69	60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111439281 PE=3 SV=1	[more]
A0A6J1F1X0	1.2e-219	97.69	60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111438907 PE=3 SV=1	[more]
A0A6J1I663	8.0e-219	97.43	60S ribosomal protein L3-like OS=Cucurbita maxima OX=3661 GN=LOC111471447 PE=3 S...	[more]
A0A0A0KAJ9	4.4e-217	96.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014790 PE=3 SV=1	[more]

BLAST of Sed0007999 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43170.1	2.0e-201	86.56	ribosomal protein 1	[more]
AT1G43170.2	2.0e-201	86.56	ribosomal protein 1	[more]
AT1G43170.3	2.0e-201	86.56	ribosomal protein 1	[more]
AT1G43170.5	2.0e-201	86.56	ribosomal protein 1	[more]
AT1G43170.6	2.0e-201	86.56	ribosomal protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044892	Ribosomal protein L3, domain 3, archaeal type superfamily	GENE3D	4.10.960.10	Ribosomal protein L3, domain 3	coord: 1..274 e-value: 8.3E-209 score: 695.1
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 44..385 e-value: 8.3E-209 score: 695.1
None	No IPR available	GENE3D	3.30.1430.10		coord: 83..207 e-value: 8.3E-209 score: 695.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR11363:SF13	60S RIBOSOMAL PROTEIN L3-1	coord: 1..389
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 1..370 e-value: 2.7E-192 score: 638.7
IPR045077	Ribosomal protein L3, archaeal/eukaryotic type	PANTHER	PTHR11363	60S RIBOSOMAL PROTEIN L3-RELATED	coord: 1..389
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 212..235
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 4..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007999.1	Sed0007999.1	mRNA
Sed0007999.2	Sed0007999.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome