Sed0007986 (gene) Chayote v1

Overview


Name	Sed0007986
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein NDR1-like
Location	LG07: 42007350 .. 42008263 (-)
RNA-Seq Expression	Sed0007986
Synteny	Sed0007986

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAACCCATTTTGTAGTTCGCCGGAAAACATGTCGGAAGCCGGCGAGTGCTGCCGGTGGTGCCTGAAATCCACCATAGCTTCCGGCTTCGCAGTTCTGTTCTTATGGCTCGGCCTCCGAAACCACAAACAACCCAAATGCTCAATCGAATATTTCTACATTCCAGCCCTGAATCAAACCCTTAATTCCTCTTCAAATTCCACCGTCTTCTTCGATCTCCGCCTCAAAAACCAGAACAAAGACAAATCCGTGCTCTACGACTCCATCGCCCTCAATTTGTCGCTCGTCGGAGCTCCGGCGAACGGCGGACGGCGCACGGTGGCGAACTTGACGGAGCCCGGATTCCACCAGGGCCGCAACAAGAAGGCGTTCAGGAAAAACGCCGTCGCAGCTGCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAGGGAGAGTCTGAGAGTTGGGGCAGAGGTCAAAGTCAACGGGCAGGGGTTGAAGGACTACCCAAATGGGGTTACGCTCAGCTCCGGCGCCGCCGTGATCGCTGGCTTTCCGGTGAGGGTTGTTTGGGTGTTGGTTTTGTGGAATTTTGGATGGAAATTTGAATTGAACTGTTTCTATTGTGGTGGGTTTGTTTTGTTTTGACGGAATTTTTGGGGCGGCGATTTTCGTCGGAAGTGTCTCCACCGCTCACTCACGGCCGACGGTAGAAGGTAGAGAAATTAATGGGTGGTTTAATTAGATTTTTTATTTTTATTTTTGTATGGAATTTGATTTGGTTGTTGATGATTATTTAAGATTATTTACCTTTAGATATGATCCAATTCTATGTATTATTCAAATTATTTTATCATCTCTAAAT

mRNA sequence

CAGAAACCCATTTTGTAGTTCGCCGGAAAACATGTCGGAAGCCGGCGAGTGCTGCCGGTGGTGCCTGAAATCCACCATAGCTTCCGGCTTCGCAGTTCTGTTCTTATGGCTCGGCCTCCGAAACCACAAACAACCCAAATGCTCAATCGAATATTTCTACATTCCAGCCCTGAATCAAACCCTTAATTCCTCTTCAAATTCCACCGTCTTCTTCGATCTCCGCCTCAAAAACCAGAACAAAGACAAATCCGTGCTCTACGACTCCATCGCCCTCAATTTGTCGCTCGTCGGAGCTCCGGCGAACGGCGGACGGCGCACGGTGGCGAACTTGACGGAGCCCGGATTCCACCAGGGCCGCAACAAGAAGGCGTTCAGGAAAAACGCCGTCGCAGCTGCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAGGGAGAGTCTGAGAGTTGGGGCAGAGGTCAAAGTCAACGGGCAGGGGTTGAAGGACTACCCAAATGGGGTTACGCTCAGCTCCGGCGCCGCCGTGATCGCTGGCTTTCCGGTGAGGGTTGTTTGGGTGTTGGTTTTGTGGAATTTTGGATGGAAATTTGAATTGAACTGTTTCTATTGTGGTGGGTTTGTTTTGTTTTGACGGAATTTTTGGGGCGGCGATTTTCGTCGGAAGTGTCTCCACCGCTCACTCACGGCCGACGGTAGAAGGTAGAGAAATTAATGGGTGGTTTAATTAGATTTTTTATTTTTATTTTTGTATGGAATTTGATTTGGTTGTTGATGATTATTTAAGATTATTTACCTTTAGATATGATCCAATTCTATGTATTATTCAAATTATTTTATCATCTCTAAAT

Coding sequence (CDS)

ATGTCGGAAGCCGGCGAGTGCTGCCGGTGGTGCCTGAAATCCACCATAGCTTCCGGCTTCGCAGTTCTGTTCTTATGGCTCGGCCTCCGAAACCACAAACAACCCAAATGCTCAATCGAATATTTCTACATTCCAGCCCTGAATCAAACCCTTAATTCCTCTTCAAATTCCACCGTCTTCTTCGATCTCCGCCTCAAAAACCAGAACAAAGACAAATCCGTGCTCTACGACTCCATCGCCCTCAATTTGTCGCTCGTCGGAGCTCCGGCGAACGGCGGACGGCGCACGGTGGCGAACTTGACGGAGCCCGGATTCCACCAGGGCCGCAACAAGAAGGCGTTCAGGAAAAACGCCGTCGCAGCTGCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAGGGAGAGTCTGAGAGTTGGGGCAGAGGTCAAAGTCAACGGGCAGGGGTTGAAGGACTACCCAAATGGGGTTACGCTCAGCTCCGGCGCCGCCGTGATCGCTGGCTTTCCGGTGAGGGTTGTTTGGGTGTTGGTTTTGTGGAATTTTGGATGGAAATTTGAATTGAACTGTTTCTATTGTGGTGGGTTTGTTTTGTTTTGA

Protein sequence

MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVAAAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVTLSSGAAVIAGFPVRVVWVLVLWNFGWKFELNCFYCGGFVLF

Homology

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BLAST of Sed0007986 vs. NCBI nr
Match: XP_038897087.1 (protein NDR1-like [Benincasa hispida])

HSP 1 Score: 295.0 bits (754), Expect = 5.2e-76
Identity = 151/207 (72.95%), Postives = 168/207 (81.16%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVF 60
           M+E+G CC  C K  I +GFA LFLWL LR HK PKCSIE+FYIPALNQ+LNS SNST+ 
Sbjct: 1   MTESGWCCHCCFKFIITTGFAALFLWLSLRTHK-PKCSIEFFYIPALNQSLNSPSNSTLL 60

Query: 61  FDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVA 120
           FDLRLKNQNKDKSV YDSI+LNL+LVGAP +G RR V NLT PGFHQGR+KKAFRK  V 
Sbjct: 61  FDLRLKNQNKDKSVYYDSISLNLTLVGAP-DGTRRPVGNLTVPGFHQGRDKKAFRKETVE 120

Query: 121 AAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVT 180
           A GVDWKAVSRNG  V RLD ATAVRYKILFWKTKRE+LR+GAEVKVN QG KDYP  +T
Sbjct: 121 ARGVDWKAVSRNGPVVVRLDFATAVRYKILFWKTKRENLRLGAEVKVNRQGEKDYPRSIT 180

Query: 181 LSSGAAVIAGFPVRVV---WVLVLWNF 205
           L+SGAAV +G  +RV+   WV VLW F
Sbjct: 181 LNSGAAVPSGSLMRVIWSFWVFVLWKF 205

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BLAST of Sed0007986 vs. NCBI nr
Match: XP_022139632.1 (protein NDR1-like [Momordica charantia])

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73
Identity = 149/207 (71.98%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVF 60
           M+EAG C R C    + SGF  LFLWL LR HK PKCSIE FYIPALNQ+LNSSS+STVF
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHK-PKCSIESFYIPALNQSLNSSSDSTVF 60

Query: 61  FDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVA 120
           FDLRLKNQNKDKSV YD+I LNL+LV    +GGRR V NLT  GFHQGR+KKAFRK  V 
Sbjct: 61  FDLRLKNQNKDKSVFYDAINLNLTLV----DGGRRPVGNLTVAGFHQGRDKKAFRKGQVE 120

Query: 121 AAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVT 180
           A GVDWKAV RNGSAVFRLDLATAVRYKILFWKTKR++LRVGAEVKVN QG K+YP+G+T
Sbjct: 121 ARGVDWKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGIT 180

Query: 181 LSSGAAVIAGFPVRVVW---VLVLWNF 205
           LSSGAAV    P   +W    L+LW F
Sbjct: 181 LSSGAAVAGRSPAGALWSVGALILWKF 202

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BLAST of Sed0007986 vs. NCBI nr
Match: KAG7024897.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.6 bits (727), Expect = 7.1e-73
Identity = 146/205 (71.22%), Postives = 161/205 (78.54%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVF 60
           M+E G CCR C    + SGFA LFLWL LR  K PKCSIE+FYIPALNQ+LNS  NSTV 
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRK-PKCSIEHFYIPALNQSLNSPLNSTVS 60

Query: 61  FDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVA 120
           FDLRLKNQNKDKSV YDS+ LNL+LVGA A G RR + N+T PGFHQGR KKAFR   + 
Sbjct: 61  FDLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVT 180
             GVDWKAVSRNG+AVFRLDLATAVR+KILFW TKRE+LRVGAE KVN QG  +YP G+T
Sbjct: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180

Query: 181 LSSGAAVIAGFPVRVV---WVLVLW 203
           LSSGAAV  G PVRV+   WV VLW
Sbjct: 181 LSSGAAVPDGSPVRVIWSFWVFVLW 203

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BLAST of Sed0007986 vs. NCBI nr
Match: KAG6592022.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.3 bits (726), Expect = 9.2e-73
Identity = 146/205 (71.22%), Postives = 161/205 (78.54%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVF 60
           M+E G CCR C    + SGFA LFLWL LR  K PKCSIE+FYIPALNQ+LNS  NSTV 
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRK-PKCSIEHFYIPALNQSLNSPLNSTVS 60

Query: 61  FDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVA 120
           FDLRLKNQNKDKSV YDS+ LNL+LVGA A G RR + N+T PGFHQGR KKAFR   + 
Sbjct: 61  FDLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIE 120

Query: 121 AAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVT 180
             GVDWKAVSRNG+AVFRLDLATAVR+KILFW TKRE+LRVGAE KVN QG  +YP G+T
Sbjct: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180

Query: 181 LSSGAAVIAGFPVRVV---WVLVLW 203
           LSSGAAV  G PVRV+   WV VLW
Sbjct: 181 LSSGAAVPDGSPVRVIWSFWVFVLW 203

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BLAST of Sed0007986 vs. NCBI nr
Match: XP_022935836.1 (protein NDR1-like [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 2.1e-72
Identity = 145/205 (70.73%), Postives = 160/205 (78.05%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVF 60
           M+E G CCR C    + SGFA LFLWL LR  K PKCSIE+FYIPALNQ+LNS  NSTV 
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRK-PKCSIEHFYIPALNQSLNSPLNSTVS 60

Query: 61  FDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVA 120
           FDLRLKNQNKDKSV YDS+ LNL+LVGA A G RR + N+T PGFHQGR KKAFR   + 
Sbjct: 61  FDLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVT 180
             GVDWKAVSRNG+AVFRLDLATAVR+KILFW TKRE+LRVGAE KVN QG  +YP G+T
Sbjct: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180

Query: 181 LSSGAAVIAGFPVRVV---WVLVLW 203
           LSSG AV  G PVRV+   WV VLW
Sbjct: 181 LSSGVAVPDGSPVRVIWSFWVFVLW 203

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BLAST of Sed0007986 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.1e-35
Identity = 88/203 (43.35%), Postives = 117/203 (57.64%), Query Frame = 0


Query: 7   CCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLK 66
           CC  CL     +G   LFLWL LR  K PKCSI+ F+IPAL +  NS  N+T+ F +R  
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADK-PKCSIQNFFIPALGKDPNSRDNTTLNFMVRCD 73

Query: 67  NQNKDKSVLYDSIALNLSLVGAPA--NGGRRTVANLTEPGFHQGRNKKAFRKNAVAAAG- 126
           N NKDK + YD + LN S +      +     V N T P F+QG  KKA +   V     
Sbjct: 74  NPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNN 133

Query: 127 -VDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVTL- 186
               +AV  NGSAVFRLDL T VR+KI+FWKTKR  + VGA+V+VNG G+K    G+ + 
Sbjct: 134 QTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMK 193

Query: 187 --SSGAAVIAGFPVRVVWVLVLW 203
              S   + + FP+ V+  L+++
Sbjct: 194 KSDSSFPLRSSFPISVLMNLLVF 215

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BLAST of Sed0007986 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.3e-74
Identity = 149/207 (71.98%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVF 60
           M+EAG C R C    + SGF  LFLWL LR HK PKCSIE FYIPALNQ+LNSSS+STVF
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHK-PKCSIESFYIPALNQSLNSSSDSTVF 60

Query: 61  FDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVA 120
           FDLRLKNQNKDKSV YD+I LNL+LV    +GGRR V NLT  GFHQGR+KKAFRK  V 
Sbjct: 61  FDLRLKNQNKDKSVFYDAINLNLTLV----DGGRRPVGNLTVAGFHQGRDKKAFRKGQVE 120

Query: 121 AAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVT 180
           A GVDWKAV RNGSAVFRLDLATAVRYKILFWKTKR++LRVGAEVKVN QG K+YP+G+T
Sbjct: 121 ARGVDWKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGIT 180

Query: 181 LSSGAAVIAGFPVRVVW---VLVLWNF 205
           LSSGAAV    P   +W    L+LW F
Sbjct: 181 LSSGAAVAGRSPAGALWSVGALILWKF 202

[Close]

BLAST of Sed0007986 vs. ExPASy TrEMBL
Match: A0A6J1F5U5 (protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 9.9e-73
Identity = 145/205 (70.73%), Postives = 160/205 (78.05%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVF 60
           M+E G CCR C    + SGFA LFLWL LR  K PKCSIE+FYIPALNQ+LNS  NSTV 
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRK-PKCSIEHFYIPALNQSLNSPLNSTVS 60

Query: 61  FDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVA 120
           FDLRLKNQNKDKSV YDS+ LNL+LVGA A G RR + N+T PGFHQGR KKAFR   + 
Sbjct: 61  FDLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVT 180
             GVDWKAVSRNG+AVFRLDLATAVR+KILFW TKRE+LRVGAE KVN QG  +YP G+T
Sbjct: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180

Query: 181 LSSGAAVIAGFPVRVV---WVLVLW 203
           LSSG AV  G PVRV+   WV VLW
Sbjct: 181 LSSGVAVPDGSPVRVIWSFWVFVLW 203

[Close]

BLAST of Sed0007986 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 7.9e-70
Identity = 142/208 (68.27%), Postives = 164/208 (78.85%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNS-TV 60
           M+E+G CC+ C K  I +GFA LFLWL LR  K PKCSIE FYIPALNQ+LNSSSNS T+
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRK-PKCSIESFYIPALNQSLNSSSNSTTL 60

Query: 61  FFDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAV 120
           +FDLRLKNQNKDKSV YD+I LN +L+    +  RR V NLT PGFHQGR+KKA RK +V
Sbjct: 61  YFDLRLKNQNKDKSVYYDTIYLNFTLL----DEARRPVGNLTVPGFHQGRDKKALRKESV 120

Query: 121 AAAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGV 180
            A GVDWKAVSRNGS + RLDLATAVRYKIL WKTKRE+LR+G E+KVNGQGLKD P+G+
Sbjct: 121 EARGVDWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGI 180

Query: 181 TLSSGAAVIAGFPVRVV---WVLVLWNF 205
           TL+SGAA+  G  VRV+   WV V W F
Sbjct: 181 TLNSGAAMPGGTLVRVIWSFWVFVWWKF 203

[Close]

BLAST of Sed0007986 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 7.9e-70
Identity = 142/208 (68.27%), Postives = 164/208 (78.85%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNS-TV 60
           M+E+G CC+ C K  I +GFA LFLWL LR  K PKCSIE FYIPALNQ+LNSSSNS T+
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRK-PKCSIESFYIPALNQSLNSSSNSTTL 60

Query: 61  FFDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAV 120
           +FDLRLKNQNKDKSV YD+I LN +L+    +  RR V NLT PGFHQGR+KKA RK +V
Sbjct: 61  YFDLRLKNQNKDKSVYYDTIYLNFTLL----DEARRPVGNLTVPGFHQGRDKKALRKESV 120

Query: 121 AAAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGV 180
            A GVDWKAVSRNGS + RLDLATAVRYKIL WKTKRE+LR+G E+KVNGQGLKD P+G+
Sbjct: 121 EARGVDWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGI 180

Query: 181 TLSSGAAVIAGFPVRVV---WVLVLWNF 205
           TL+SGAA+  G  VRV+   WV V W F
Sbjct: 181 TLNSGAAMPGGTLVRVIWSFWVFVWWKF 203

[Close]

BLAST of Sed0007986 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 5.1e-69
Identity = 142/205 (69.27%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 1   MSEAGECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVF 60
           M+E+G CCR C    + SGFA LFLWL LR  K PKCSIE FYIPALNQ+LNS  NSTV 
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRK-PKCSIESFYIPALNQSLNSPLNSTVS 60

Query: 61  FDLRLKNQNKDKSVLYDSIALNLSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVA 120
           FDLRLKNQNKDKSV YDS+ LNL+LVG       R + N+T PGFHQGR KKAFR   + 
Sbjct: 61  FDLRLKNQNKDKSVFYDSLNLNLTLVGG------RPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVT 180
           A GVDWKAVSRNGSA+FRLDLATAVR+KILFW TKRE+LRVGAE KVN QG  +YP G+T
Sbjct: 121 ARGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GIT 180

Query: 181 LSSGAAVIAGFPVRVV---WVLVLW 203
           LSSGAAV  G PV V+   WV VLW
Sbjct: 181 LSSGAAVPDGSPVTVIWSSWVFVLW 197

[Close]

BLAST of Sed0007986 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 88/203 (43.35%), Postives = 117/203 (57.64%), Query Frame = 0


Query: 7   CCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLK 66
           CC  CL     +G   LFLWL LR  K PKCSI+ F+IPAL +  NS  N+T+ F +R  
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADK-PKCSIQNFFIPALGKDPNSRDNTTLNFMVRCD 73

Query: 67  NQNKDKSVLYDSIALNLSLVGAPA--NGGRRTVANLTEPGFHQGRNKKAFRKNAVAAAG- 126
           N NKDK + YD + LN S +      +     V N T P F+QG  KKA +   V     
Sbjct: 74  NPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNN 133

Query: 127 -VDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRESLRVGAEVKVNGQGLKDYPNGVTL- 186
               +AV  NGSAVFRLDL T VR+KI+FWKTKR  + VGA+V+VNG G+K    G+ + 
Sbjct: 134 QTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMK 193

Query: 187 --SSGAAVIAGFPVRVVWVLVLW 203
              S   + + FP+ V+  L+++
Sbjct: 194 KSDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of Sed0007986 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 79/173 (45.66%), Postives = 102/173 (58.96%), Query Frame = 0


Query: 6   ECCRWCLKSTIASGFAVLFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVFFDLRL 65
           +CC    K    +    L LWL LR  K+PKCSI+ FYIPAL++ L+S  N+T+ F +R 
Sbjct: 13  KCCTCFFKFIFTTRLGALILWLSLR-AKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRC 72

Query: 66  KNQNKDKSVLYDSIALNLSLVGAPANGGRR--TVANLTEPGFHQGRNKKAFRKNAVAAAG 125
            N NKDK + YD + L  S +            VAN T P F+QG  KKA +   V    
Sbjct: 73  DNPNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPLN 132

Query: 126 --VDWKAVSRNGSAVFRLDLATAVRYKILFWKTK-RESLRVGAEVKVNGQGLK 174
                +AV  NGSAVFRLDL T VR+KI+FWKTK    ++VGA+V+VNG G+K
Sbjct: 133 NQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVK 184

[Close]

BLAST of Sed0007986 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-26
Identity = 68/164 (41.46%), Postives = 94/164 (57.32%), Query Frame = 0


Query: 23  LFLWLGLRNHKQPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLKNQNKDKSVLYDSIALN 82
           L LWL    H  P+CSI YFYIPALN++L SS N+T+ F +RLKN N  + + Y+ + L+
Sbjct: 29  LCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQGIYYEDLHLS 88

Query: 83  LSLVGAPANGGRRTVANLTEPGFHQGRNKKAFRKNAVAAAGVDW--KAVSRNGSAVFRLD 142
            S      N     VAN T P F+QG  KKA +             +AV  NGSA+FR+D
Sbjct: 89  FS---TRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTVIQAVLPNGSAIFRVD 148

Query: 143 LATAVRYKILFWKTKRESLRVGAEVKVNGQG---LKDYPNGVTL 182
           L   V+YK++ WKTKR  L+    ++VN  G   +KD  +G+ +
Sbjct: 149 LKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKM 189

The following BLAST results are available for this feature:

BLAST of Sed0007986 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897087.1	5.2e-76	72.95	protein NDR1-like [Benincasa hispida]	[more]
XP_022139632.1	1.1e-73	71.98	protein NDR1-like [Momordica charantia]	[more]
KAG7024897.1	7.1e-73	71.22	Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592022.1	9.2e-73	71.22	Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022935836.1	2.1e-72	70.73	protein NDR1-like [Cucurbita moschata]	[more]

BLAST of Sed0007986 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	2.1e-35	43.35	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of Sed0007986 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEH8	5.3e-74	71.98	protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1	[more]
A0A6J1F5U5	9.9e-73	70.73	protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1	[more]
A0A5A7TYN2	7.9e-70	68.27	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	7.9e-70	68.27	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]
A0A6J1IH99	5.1e-69	69.27	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]

BLAST of Sed0007986 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	1.5e-36	43.35	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	1.1e-31	45.66	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	2.4e-26	41.46	non-race specific disease resistance protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 4..187
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 4..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007986.1	Sed0007986.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane