Sed0007913 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCTTCGTCGAATTTTCTTTCTCAAATTCGCACTTTGTTCATCTCTGTTCTTCCAAGTTTTTTCGCCATTAATAATCCTTCCCATATTAGACAAAGATGTCTCGTTGCTTTCCTTTCCCACCTCCTGGTTACGAGCTGAGCCCGGCCTTGATCGAATTGATTAAGGTTTGTTTCAGCTACTTGGTTGGTTTTCAATAATGTGTGTGTTCATTTGATTGCGAGATCTGGGCTTTATCTGTAATCCGGAACGGCTTAATTTTGTGTAATTTAACCCAATGGGGGAAAATCGTACTGGGTTTTTCTTGTTTGGACAGATTTGCAAGTTTTGTACCCTAGTCATAAGAAATAAGATTTTGGGATATTGAGAGAGTGTAGATTCTAGTTTCAGTTTTGTGTTTCTGTGTGTAAGTTGTATCTCCTCGAGGATTGAGAGATTGAGAGTTCGAGTGTGTATATAGTGGTTTGGGAGTTGGTCAATTGAATCTTGTCTGGAGTTGGTCAATTTAACACTTGAAAGAGTAATCATATGAGGCTTATAATTTAGTAGATCGATTATGTTTCAGTTCCTGATTTTTCAAGTGGGTTTTTTTCTACTAATCTAAAACCTCCTAGGGAAAGTGTAGTTTGATAAATATGTACGCCTTAGTATCAATTTTGCATAACCTTTTCCTCGGATAATCTTAGGCATTCCTAAGATTATTAGGAGAAAAGGTTATGCACAATTGGAATGGGCGTGGTTACCCTGGCTATAGTGCTAATCTTAGGCGTATTGATTAGATGACGGAAACAGTCTAAATTCAGATGAACATCTCCTTTTACCATAAGAAAGGCTACCCTTTTGAAGGGTTGCATTTGATTATTTAGTTAGGACAATGGTTGATCTGTTTGGTGCTTGTGTGATCTGCGTTTTGTTTAAAATGGTTATTCTGGTGCATTATAGCTCCAATCTGAAATACGAGAAAGAAGGGCTGGAAGTAAGAAACATAAGAGTAAGCACAAGAAAGAGAAGAGTAAGGATAGGAAACACACGAGCAAAGAACATAAAGGAAAATCTTCTCGCAGCAGCTCGAGTGATCGTAAACAGAAGGAAGTTAAAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGACAACCAATATGGCCTCAAAGCCCTGGCTACTTGTCTGACGTATCTCAGATCAACCACAAGAGGAAAAGGGATGCTTCATCACAACCTAATGAAGGTTCTAAGCCTGGTGGGTTCTCTTTCTAGGCTCTTTTATGAAATATGATCTCTTGGCTATTTGAATCAATGCTAATATATAATTGAATCTAAAACAGAAAAAATCAACCAGATCAAGCCAGCTTCTTCACCAAGCCAGCTTGAGAGTTCGTCAGCTGGCCGTGATCGAAAGAGAGTTGAGAACAGATATGGACCTGTTGATAAAAAACCATGCCTCACAATTTCTGACAGAGCTGTTACTGTCAAGGATTCAATTTCTAAACATAAGATCAAAGATCCTACATTGAATGCTGTCAAGAACATTGGTAGTACTCATCAACAAAACCGTGCATCGGTACCTGCTCGCATCAGACATCCTGCTGAATCTGCTTATGAGTCCTTGACTGTGAAATGGGTACCACCTCCAATTCAGTGGGAGCTACCAATGGATGATCAAGAATGGCTCTTTGGAGCAAGAAAGCAAAATGAGCATACAGCAACAACCACCAACACAGCTTTCAACACTGTTCCCAGCTGCAGAAACTCCAGTTTGTGGCCGAGAGGACAGTATCTGCCCGAAGCCGATGTTTATTCACTGCCGTATACGATACCATTTTAATTTTGGGACAATCAAGCAGGATGGATTTAGCTTCAATACTGTTCCTAGCTGCAGATGCTCCAGTTTTTTGAGACCGCAAGGACAATGCCTGCCCGATACCGATGTTTATCCATTGCCTTATACGACCCCGTTTTATTCTTTACTTGAAAGTGTAACGTGTACAGGACGCTAGTAGGAACAATTTTTT GTCTTCGTCGAATTTTCTTTCTCAAATTCGCACTTTGTTCATCTCTGTTCTTCCAAGTTTTTTCGCCATTAATAATCCTTCCCATATTAGACAAAGATGTCTCGTTGCTTTCCTTTCCCACCTCCTGGTTACGAGCTGAGCCCGGCCTTGATCGAATTGATTAAGCTCCAATCTGAAATACGAGAAAGAAGGGCTGGAAGTAAGAAACATAAGAGTAAGCACAAGAAAGAGAAGAGTAAGGATAGGAAACACACGAGCAAAGAACATAAAGGAAAATCTTCTCGCAGCAGCTCGAGTGATCGTAAACAGAAGGAAGTTAAAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGACAACCAATATGGCCTCAAAGCCCTGGCTACTTGTCTGACGTATCTCAGATCAACCACAAGAGGAAAAGGGATGCTTCATCACAACCTAATGAAGGTTCTAAGCCTGAAAAAATCAACCAGATCAAGCCAGCTTCTTCACCAAGCCAGCTTGAGAGTTCGTCAGCTGGCCGTGATCGAAAGAGAGTTGAGAACAGATATGGACCTGTTGATAAAAAACCATGCCTCACAATTTCTGACAGAGCTGTTACTGTCAAGGATTCAATTTCTAAACATAAGATCAAAGATCCTACATTGAATGCTGTCAAGAACATTGGTAGTACTCATCAACAAAACCGTGCATCGGTACCTGCTCGCATCAGACATCCTGCTGAATCTGCTTATGAGTCCTTGACTGTGAAATGGGTACCACCTCCAATTCAGTGGGAGCTACCAATGGATGATCAAGAATGGCTCTTTGGAGCAAGAAAGCAAAATGAGCATACAGCAACAACCACCAACACAGCTTTCAACACTGTTCCCAGCTGCAGAAACTCCAGTTTGTGGCCGAGAGGACAGTATCTGCCCGAAGCCGATGTTTATTCACTGCCGTATACGATACCATTTTAATTTTGGGACAATCAAGCAGGATGGATTTAGCTTCAATACTGTTCCTAGCTGCAGATGCTCCAGTTTTTTGAGACCGCAAGGACAATGCCTGCCCGATACCGATGTTTATCCATTGCCTTATACGACCCCGTTTTATTCTTTACTTGAAAGTGTAACGTGTACAGGACGCTAGTAGGAACAATTTTTT ATGTCTCGTTGCTTTCCTTTCCCACCTCCTGGTTACGAGCTGAGCCCGGCCTTGATCGAATTGATTAAGCTCCAATCTGAAATACGAGAAAGAAGGGCTGGAAGTAAGAAACATAAGAGTAAGCACAAGAAAGAGAAGAGTAAGGATAGGAAACACACGAGCAAAGAACATAAAGGAAAATCTTCTCGCAGCAGCTCGAGTGATCGTAAACAGAAGGAAGTTAAAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGACAACCAATATGGCCTCAAAGCCCTGGCTACTTGTCTGACGTATCTCAGATCAACCACAAGAGGAAAAGGGATGCTTCATCACAACCTAATGAAGGTTCTAAGCCTGAAAAAATCAACCAGATCAAGCCAGCTTCTTCACCAAGCCAGCTTGAGAGTTCGTCAGCTGGCCGTGATCGAAAGAGAGTTGAGAACAGATATGGACCTGTTGATAAAAAACCATGCCTCACAATTTCTGACAGAGCTGTTACTGTCAAGGATTCAATTTCTAAACATAAGATCAAAGATCCTACATTGAATGCTGTCAAGAACATTGGTAGTACTCATCAACAAAACCGTGCATCGGTACCTGCTCGCATCAGACATCCTGCTGAATCTGCTTATGAGTCCTTGACTGTGAAATGGGTACCACCTCCAATTCAGTGGGAGCTACCAATGGATGATCAAGAATGGCTCTTTGGAGCAAGAAAGCAAAATGAGCATACAGCAACAACCACCAACACAGCTTTCAACACTGTTCCCAGCTGCAGAAACTCCAGTTTGTGGCCGAGAGGACAGTATCTGCCCGAAGCCGATGTTTATTCACTGCCGTATACGATACCATTTTAA MSRCFPFPPPGYELSPALIELIKLQSEIRERRAGSKKHKSKHKKEKSKDRKHTSKEHKGKSSRSSSSDRKQKEVKTKVEAEQLEKSGLTEEHGQPIWPQSPGYLSDVSQINHKRKRDASSQPNEGSKPEKINQIKPASSPSQLESSSAGRDRKRVENRYGPVDKKPCLTISDRAVTVKDSISKHKIKDPTLNAVKNIGSTHQQNRASVPARIRHPAESAYESLTVKWVPPPIQWELPMDDQEWLFGARKQNEHTATTTNTAFNTVPSCRNSSLWPRGQYLPEADVYSLPYTIPF Homology
BLAST of Sed0007913 vs. NCBI nr
Match: XP_022144272.1 (chromatin assembly factor 1 subunit A-like [Momordica charantia]) HSP 1 Score: 305.4 bits (781), Expect = 5.1e-79 Identity = 192/328 (58.54%), Postives = 224/328 (68.29%), Query Frame = 0
BLAST of Sed0007913 vs. NCBI nr
Match: XP_022961881.1 (DNA ligase 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 299.7 bits (766), Expect = 2.8e-77 Identity = 192/320 (60.00%), Postives = 222/320 (69.38%), Query Frame = 0
BLAST of Sed0007913 vs. NCBI nr
Match: XP_023538217.1 (uncharacterized protein LOC111799057 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.4 bits (760), Expect = 1.4e-76 Identity = 197/365 (53.97%), Postives = 222/365 (60.82%), Query Frame = 0
BLAST of Sed0007913 vs. NCBI nr
Match: XP_023545923.1 (uncharacterized protein LOC111805212 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 296.2 bits (757), Expect = 3.1e-76 Identity = 194/344 (56.40%), Postives = 223/344 (64.83%), Query Frame = 0
BLAST of Sed0007913 vs. NCBI nr
Match: XP_023002403.1 (uncharacterized protein LOC111496256 [Cucurbita maxima]) HSP 1 Score: 293.9 bits (751), Expect = 1.5e-75 Identity = 195/364 (53.57%), Postives = 221/364 (60.71%), Query Frame = 0
BLAST of Sed0007913 vs. ExPASy TrEMBL
Match: A0A6J1CT76 (chromatin assembly factor 1 subunit A-like OS=Momordica charantia OX=3673 GN=LOC111013996 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 2.5e-79 Identity = 192/328 (58.54%), Postives = 224/328 (68.29%), Query Frame = 0
BLAST of Sed0007913 vs. ExPASy TrEMBL
Match: A0A6J1HBK0 (DNA ligase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462522 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77 Identity = 192/320 (60.00%), Postives = 222/320 (69.38%), Query Frame = 0
BLAST of Sed0007913 vs. ExPASy TrEMBL
Match: A0A6J1KTG3 (uncharacterized protein LOC111496256 OS=Cucurbita maxima OX=3661 GN=LOC111496256 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 7.5e-76 Identity = 195/364 (53.57%), Postives = 221/364 (60.71%), Query Frame = 0
BLAST of Sed0007913 vs. ExPASy TrEMBL
Match: A0A6J1KC15 (uncharacterized protein LOC111492505 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492505 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75 Identity = 195/344 (56.69%), Postives = 222/344 (64.53%), Query Frame = 0
BLAST of Sed0007913 vs. ExPASy TrEMBL
Match: A0A6J1HD43 (uncharacterized protein LOC111462522 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462522 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 3.7e-75 Identity = 190/320 (59.38%), Postives = 220/320 (68.75%), Query Frame = 0
BLAST of Sed0007913 vs. TAIR 10
Match: AT1G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits to 438 proteins in 92 species: Archae - 0; Bacteria - 14; Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other Eukaryotes - 105 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 1.8e-13 Identity = 103/314 (32.80%), Postives = 143/314 (45.54%), Query Frame = 0
BLAST of Sed0007913 vs. TAIR 10
Match: AT1G75860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 8.3e-11 Identity = 85/306 (27.78%), Postives = 130/306 (42.48%), Query Frame = 0
BLAST of Sed0007913 vs. TAIR 10
Match: AT2G17787.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 2.1e-09 Identity = 94/340 (27.65%), Postives = 148/340 (43.53%), Query Frame = 0
BLAST of Sed0007913 vs. TAIR 10
Match: AT1G20100.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05 Identity = 54/124 (43.55%), Postives = 66/124 (53.23%), Query Frame = 0
BLAST of Sed0007913 vs. TAIR 10
Match: AT4G35940.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17787.1). ) HSP 1 Score: 45.4 bits (106), Expect = 8.9e-05 Identity = 99/398 (24.87%), Postives = 148/398 (37.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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