Sed0007662 (gene) Chayote v1

Overview


Name	Sed0007662
Type	gene
Organism	Sechium edule (Chayote v1)
Description	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like
Location	LG04: 226507 .. 230226 (+)
RNA-Seq Expression	Sed0007662
Synteny	Sed0007662

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGACTCCATCTTCGCCAGTAGAAGCAGCAGATGCTCAGGATTCACGAAGATAAAGATTTCTTCAATTTTCATCTTCATGTTGATTCTGAGCAGTTCTAGAAGTTCGTTTTCGTTTTAGATTTCGTTCAATCTCAGAAGTTGATATCTGAATTTGCGAATTCGTCCTCGAACCAGAGCTTGGTTACTTCCATGGCGATTGCTTCCATTTCTATGCTCCGCCACCACACCGCCGCCATCGGCGCCACCGCATCGGTGCCGATCTTCGGCACTGTTCTCCGGCGATTCTTCAACGTCCGATGCCTCTCAATTGTTGCCAAACACCATAACCCTAACAATGTCTCCAACAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTCGACACACGTTCAAGGATTATTCGTCGCTCGCACCGGTTCTCACTCCTCAAGAATCTCCTCCTCTCTCCGAATCTCAAGCCATCGGCACCGTCGCCGCTGCACAAGCAAATTTCATGCGCGTAATCGTTCAGTCACTTCCGTCTCAACTCTCTCACAGTTCGAACGACGATTCGGAACTTTCTGGAAGCTTAGAAGGCGATTCTTCGGAATTTTCCAGGCATGGCATTGAGTTGCTGTGCGTGGTGAAGGCGGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGGGATAAGGTGGTTGTCGGTTCCATTGATTGGGTGGACCGCCGTGGAATGATCGAGAATGTGTTTCAAAGAAGCTCGGAGATTCTTGATCCTCCGGTGGCGAATGTGGACCATTTGGTCGTGTTTTTCTCCATGGATCAGCCGAAGTTAGAGCCGTTTACACTTACAAGGTTTCTTGTTGAAGCAGAGTCTACCGGAATTCCCCTGACGCTGGTTCTCAATAAGTTGGAACTCGTTGATGAAGAGGTCGTAATTTCAATCTTTTACTTATTTAAATCTCTAATGTTAACTATTTTCATCCCTTATGCTATATCTGAAATCTCTTTCGTCATTTGCCAATACTTGTGCATATGAATTAGAGTGGTGTTGCAGAATGATGTGCATGAATGAGTTTTTGAAATGTTAGGAAAGAATCATAAACAGAATAAAGGAAATGTGAGATAAAGAACCCACTGGATTTACAAATCATGTCCACCAAGTGAGGAGAGAAACCGTTTTATTTAAGAGATCGCAATTAATAAAATTACTAGGTAAAGGGGATAGGCATTTAAAAAGAGTGTATGTAGTACACTTCTCATACATCCTAAATGCATCATTTGATTCAAATTACATAAATGGAAAATACAAAAGTTCAAAACATAATCTATGTACTTTCTAGGTTTTGTAAAATCCTAATACATCAATAGACTTCCATTGAATATTCATGACATATCATAATTAGTTTAAGGCATTTCATTGTGAACATCTGAAAAAAAAAGGATACACCTAAATTTCAGTGGTAATGTTGTAGTCCAACAAAGTAGATTTGATGACTTATCAACATTTGCTCCCGACTTGGAAATGACGAGAAAAAATGAGCTGCAATTAATAAAGCATGCGCTAGTAGTCCTATTGATATACAAGTCTGTTCATAAATTGTCAACCTCTGTCATGTTCTAATTTTGCTTGTGTTCTTTACTATTTTTCACGGGTGCCTTTTTTTTTTTTAATAAAATGATGCCTTAACTTGTAACATGATTGTGGTAGTACATATTCTGTAGTATTGGAACGGGAACCTGCTTGAATCTCTCTAGGAGAGAAGTTACTGTTCAAAGTTTCTTGTAGTTATGTATGCATTTTCTTTCTTAATGCTGAAAGTTGTTAGTGATGGCATATGGCAGACACTAGTTTCCTGGAAGTCCAGACTACGTAGCTGGGGCTATGAGCCCCTTTTTTGCAGTGTTCAAACTAGGATTGGACTTGATTCACTTGCATTTATCTTGAATGATCAAACTTCAGTTGTTGTGGGTCCAAGTGGAGTTGGGAAATCTAGTCTTATCAATGCTCTAAGAAACAATAACCGTGCTGTTGATGCTTTAGAGGGAGATAACCGGTTTGATCCGGTATGTTCAATCATTTTTCCATTGCTAACTCTGCGTTGGTTTTGTTGGTTAATGTATTAATTGTTACTTTCTTGATCACTAGGTTCATAAAAGGTCTCTATTTTTCTGGTCTTTTAACAGATTTTAGGTAGCAAGTGGTTCGAGGATCAGCGTGTTGCGGAAGTTTCGATGAGAAGTGGTAGAGGGAAGCATACTACTCGTCATGTTTCTCTCCTACCATTGTCGGGAGGTGGCTATCTGGCAGATACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAGCAATCTCTTGCCCAAGCCTTCCCTGAGGTATACATTTCTTTACAATGTTGACAATGATTACTGATTATTTTTAATTCTGGCATAAATTTCAACTTCTGTAGCATTTCTTGGGTTCAATTAAATTTTCTCTGCAGATCCAAAAAAGGCTTCTTGCCAGTGAACCTGCTAAATGCTCTTTTAATGATTGCTTACATCTTGGAGAACCGGGATGTGTTGTAAAAGGAGATTGGGAGAGATACCAATATTATTTCCAACTTCTTGATGAAATCAGAATTAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGAGAGGGTGATGTAAGGTATGTTTACAATTGTGAAGATTGCATCTTTAACCCTCATAAGTCGGCCTAATTTTCCAATAGATCTCGGAGAACTAAAAAGGAATAAGTTCAATATATGATAGTTACCTACCTATCTAAAAATTAATTTTCTACAAGTTTTTTTTACAAACAAATGTAATAGGGCTGGGTAGTGATCTAGGGAGATTCATCGAGGGGCATGAAAATTGGCTAAGACACTCACACATATATACACACGCATATTTGATCTATGCTTGAGAGCTTGAGAGGGTATTGAATCAAACAGAATTATTGGACCTGTGATGTTATTTCATTCTGACATTTTATTTTTTATTTTAAACATATTACAACGCTAAAACAAGTCTTCTGTAAATATCCTTTTGGCTTTAGTGTTGTGCATTTCAAGTAGTAAGGAAACAGGGACCTCATCTTTTGATGTCTTTTTTTATGTATCAACTCAATATCCTAGTTACTTTGGAGGTTCTCATCTTCTGCAACAAAGGTTATTAATCACATTAGGGGCATACGAGAACTTATGCAATTTATTTGAGTGACACCAAAAGTTCTCTCCAGTGGTCTTATGCCATTTATTGATTTATATGAACCTCAAACAACAATATTGCGGGTATTTAATCCTTGATTCTCTTATGAGCTGAATTCAAAACTAAGGTGATGGAAGAAACTTTTCTTTGCAGGATTAAGGTTGGAGATATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTCAAGAAGCATAGGAGACAATCTCGCAAGAGAGTGAACCAGTCGATACTTAACGAGTTGGAAGATGAAGATGATGACTCGTTGGAGGAGAGCGATCCCATTTTGAGGGCAATGAGGAATGAAAACCAGTAGTAGAAAACAAAGGTATCTGCAGCGTATAATCCCACCCATTGTATATACTTACCTTTTACCCATCTTTGACTCTTACATGTTGAACGGTTTCCACCGGTACAAAGCATAAGGAAATGAAAGCTTTGAATCAATTTGCTTAGAAAATAGAACAGAGTTCCCATAGCGATTTGATACAAAGTCA

mRNA sequence

AATGACTCCATCTTCGCCAGTAGAAGCAGCAGATGCTCAGGATTCACGAAGATAAAGATTTCTTCAATTTTCATCTTCATGTTGATTCTGAGCAGTTCTAGAAGTTCGTTTTCGTTTTAGATTTCGTTCAATCTCAGAAGTTGATATCTGAATTTGCGAATTCGTCCTCGAACCAGAGCTTGGTTACTTCCATGGCGATTGCTTCCATTTCTATGCTCCGCCACCACACCGCCGCCATCGGCGCCACCGCATCGGTGCCGATCTTCGGCACTGTTCTCCGGCGATTCTTCAACGTCCGATGCCTCTCAATTGTTGCCAAACACCATAACCCTAACAATGTCTCCAACAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTCGACACACGTTCAAGGATTATTCGTCGCTCGCACCGGTTCTCACTCCTCAAGAATCTCCTCCTCTCTCCGAATCTCAAGCCATCGGCACCGTCGCCGCTGCACAAGCAAATTTCATGCGCGTAATCGTTCAGTCACTTCCGTCTCAACTCTCTCACAGTTCGAACGACGATTCGGAACTTTCTGGAAGCTTAGAAGGCGATTCTTCGGAATTTTCCAGGCATGGCATTGAGTTGCTGTGCGTGGTGAAGGCGGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGGGATAAGGTGGTTGTCGGTTCCATTGATTGGGTGGACCGCCGTGGAATGATCGAGAATGTGTTTCAAAGAAGCTCGGAGATTCTTGATCCTCCGGTGGCGAATGTGGACCATTTGGTCGTGTTTTTCTCCATGGATCAGCCGAAGTTAGAGCCGTTTACACTTACAAGGTTTCTTGTTGAAGCAGAGTCTACCGGAATTCCCCTGACGCTGGTTCTCAATAAGTTGGAACTCGTTGATGAAGAGACACTAGTTTCCTGGAAGTCCAGACTACGTAGCTGGGGCTATGAGCCCCTTTTTTGCAGTGTTCAAACTAGGATTGGACTTGATTCACTTGCATTTATCTTGAATGATCAAACTTCAGTTGTTGTGGGTCCAAGTGGAGTTGGGAAATCTAGTCTTATCAATGCTCTAAGAAACAATAACCGTGCTGTTGATGCTTTAGAGGGAGATAACCGGTTTGATCCGATTTTAGGTAGCAAGTGGTTCGAGGATCAGCGTGTTGCGGAAGTTTCGATGAGAAGTGGTAGAGGGAAGCATACTACTCGTCATGTTTCTCTCCTACCATTGTCGGGAGGTGGCTATCTGGCAGATACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAGCAATCTCTTGCCCAAGCCTTCCCTGAGATCCAAAAAAGGCTTCTTGCCAGTGAACCTGCTAAATGCTCTTTTAATGATTGCTTACATCTTGGAGAACCGGGATGTGTTGTAAAAGGAGATTGGGAGAGATACCAATATTATTTCCAACTTCTTGATGAAATCAGAATTAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGAGAGGGTGATGTAAGGATTAAGGTTGGAGATATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTCAAGAAGCATAGGAGACAATCTCGCAAGAGAGTGAACCAGTCGATACTTAACGAGTTGGAAGATGAAGATGATGACTCGTTGGAGGAGAGCGATCCCATTTTGAGGGCAATGAGGAATGAAAACCAGTAGTAGAAAACAAAGGTATCTGCAGCGTATAATCCCACCCATTGTATATACTTACCTTTTACCCATCTTTGACTCTTACATGTTGAACGGTTTCCACCGGTACAAAGCATAAGGAAATGAAAGCTTTGAATCAATTTGCTTAGAAAATAGAACAGAGTTCCCATAGCGATTTGATACAAAGTCA

Coding sequence (CDS)

ATGGCGATTGCTTCCATTTCTATGCTCCGCCACCACACCGCCGCCATCGGCGCCACCGCATCGGTGCCGATCTTCGGCACTGTTCTCCGGCGATTCTTCAACGTCCGATGCCTCTCAATTGTTGCCAAACACCATAACCCTAACAATGTCTCCAACAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTCGACACACGTTCAAGGATTATTCGTCGCTCGCACCGGTTCTCACTCCTCAAGAATCTCCTCCTCTCTCCGAATCTCAAGCCATCGGCACCGTCGCCGCTGCACAAGCAAATTTCATGCGCGTAATCGTTCAGTCACTTCCGTCTCAACTCTCTCACAGTTCGAACGACGATTCGGAACTTTCTGGAAGCTTAGAAGGCGATTCTTCGGAATTTTCCAGGCATGGCATTGAGTTGCTGTGCGTGGTGAAGGCGGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGGGATAAGGTGGTTGTCGGTTCCATTGATTGGGTGGACCGCCGTGGAATGATCGAGAATGTGTTTCAAAGAAGCTCGGAGATTCTTGATCCTCCGGTGGCGAATGTGGACCATTTGGTCGTGTTTTTCTCCATGGATCAGCCGAAGTTAGAGCCGTTTACACTTACAAGGTTTCTTGTTGAAGCAGAGTCTACCGGAATTCCCCTGACGCTGGTTCTCAATAAGTTGGAACTCGTTGATGAAGAGACACTAGTTTCCTGGAAGTCCAGACTACGTAGCTGGGGCTATGAGCCCCTTTTTTGCAGTGTTCAAACTAGGATTGGACTTGATTCACTTGCATTTATCTTGAATGATCAAACTTCAGTTGTTGTGGGTCCAAGTGGAGTTGGGAAATCTAGTCTTATCAATGCTCTAAGAAACAATAACCGTGCTGTTGATGCTTTAGAGGGAGATAACCGGTTTGATCCGATTTTAGGTAGCAAGTGGTTCGAGGATCAGCGTGTTGCGGAAGTTTCGATGAGAAGTGGTAGAGGGAAGCATACTACTCGTCATGTTTCTCTCCTACCATTGTCGGGAGGTGGCTATCTGGCAGATACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAGCAATCTCTTGCCCAAGCCTTCCCTGAGATCCAAAAAAGGCTTCTTGCCAGTGAACCTGCTAAATGCTCTTTTAATGATTGCTTACATCTTGGAGAACCGGGATGTGTTGTAAAAGGAGATTGGGAGAGATACCAATATTATTTCCAACTTCTTGATGAAATCAGAATTAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGAGAGGGTGATGTAAGGATTAAGGTTGGAGATATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTCAAGAAGCATAGGAGACAATCTCGCAAGAGAGTGAACCAGTCGATACTTAACGAGTTGGAAGATGAAGATGATGACTCGTTGGAGGAGAGCGATCCCATTTTGAGGGCAATGAGGAATGAAAACCAGTAG

Protein sequence

MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNLLRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDDSELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEETLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNNRAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNELEDEDDDSLEESDPILRAMRNENQ

Homology

[Close]

BLAST of Sed0007662 vs. NCBI nr
Match: XP_022132325.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 891.0 bits (2301), Expect = 4.9e-255
Identity = 459/507 (90.53%), Postives = 480/507 (94.67%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAA  ATAS+P FG VLRRFFNVRC S+VAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAA--ATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFKDYSSLAP L+PQ++PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS SSN D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEGDSSE SR G+ELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FSMDQPKLE FTLTRFL+EAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           TLVSWKSRLRSWGYEPLFCSVQT+ GLDSLA+IL DQT+V+VGPSGVGKSSLINALRNN+
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 RAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
           R VDA+EGDN FDPILGSKWFEDQRVAEVS RSGRGKHTTRHVSLLPLSGGGYLADTPGF
Sbjct: 301 RGVDAVEGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQK LLA+EPA+CSFNDCLHLGEPGCV+KGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN-- 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN  
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 -ELEDED-DDSLEESDPILRAMRNENQ 504
            ELEDED DDSL++ DPIL+AMRNE Q
Sbjct: 481 DELEDEDEDDSLDKEDPILKAMRNEQQ 505

[Close]

BLAST of Sed0007662 vs. NCBI nr
Match: XP_023536955.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 889.4 bits (2297), Expect = 1.4e-254
Identity = 456/506 (90.12%), Postives = 478/506 (94.47%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASIS+LRHH+ +I A ASVP FG +LRR FNVRCLSIVAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISILRHHSTSIAAIASVPAFGNILRRCFNVRCLSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFK+YSSLAPVL+PQ+ PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS SSN D
Sbjct: 61  LRAKHTFKNYSSLAPVLSPQDIPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNSD 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEGDSS+ SR GIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SERSGSLEGDSSDSSRLGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FS+DQPKLEPFTLTRFLVEAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSIDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQTRIGLDSLA+IL DQT+V+VGPSGVGKSSLINALR+NN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTRIGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNN 300

Query: 301 RAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
           RA DA+EGDN FDPI  SKWFEDQRVAEVS RSGRGKHTTRHVSLLPL GGGYLADTPGF
Sbjct: 301 RAADAVEGDNWFDPIRDSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLMGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+ +LLASEPAKCSFNDCLHLGEPGCV+ GDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIRNKLLASEPAKCSFNDCLHLGEPGCVINGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN-- 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN  
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 -ELEDEDDDSLEESDPILRAMRNENQ 504
            ELEDEDDDSLEE DPILRAMRNEN+
Sbjct: 481 DELEDEDDDSLEEDDPILRAMRNENK 506

[Close]

BLAST of Sed0007662 vs. NCBI nr
Match: XP_022951811.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 886.7 bits (2290), Expect = 9.2e-254
Identity = 456/506 (90.12%), Postives = 478/506 (94.47%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHH+ +I A ASVP FG VLRR FNVRCLSIVAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHSTSIAAIASVPGFGNVLRRCFNVRCLSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFK+YSSLAPVL+PQ+ PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS SSN+D
Sbjct: 61  LRAKHTFKNYSSLAPVLSPQDIPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNND 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEGDS + SR GIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SERSGSLEGDSLDSSRLGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FS++QPKLEPFTLTRFLVEAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSIEQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQTRIGLDSLA+IL DQT+V+VGPSGVGKSSLINALR+NN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTRIGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNN 300

Query: 301 RAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
           RA DA+EGDN FDPI  SKWFEDQRVAEVS RSGRGKHTTRHVSLLPL GGGYLADTPGF
Sbjct: 301 RAADAVEGDNWFDPIRDSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLMGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+ +LLASEPAKCSFNDCLHLGEPGCV+ GDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIRNKLLASEPAKCSFNDCLHLGEPGCVINGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN-- 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN  
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 -ELEDEDDDSLEESDPILRAMRNENQ 504
            ELEDEDDDSLEE DPILRAMRNEN+
Sbjct: 481 DELEDEDDDSLEEDDPILRAMRNENK 506

[Close]

BLAST of Sed0007662 vs. NCBI nr
Match: XP_022132324.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 886.3 bits (2289), Expect = 1.2e-253
Identity = 459/508 (90.35%), Postives = 480/508 (94.49%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAA  ATAS+P FG VLRRFFNVRC S+VAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAA--ATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFKDYSSLAP L+PQ++PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS SSN D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEGDSSE SR G+ELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FSMDQPKLE FTLTRFL+EAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           TLVSWKSRLRSWGYEPLFCSVQT+ GLDSLA+IL DQT+V+VGPSGVGKSSLINALRNN+
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 RAVDALEGDNRFDP-ILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPG 360
           R VDA+EGDN FDP ILGSKWFEDQRVAEVS RSGRGKHTTRHVSLLPLSGGGYLADTPG
Sbjct: 301 RGVDAVEGDNWFDPQILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPG 360

Query: 361 FNQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQ 420
           FNQPSLMKITKQSLAQAFPEIQK LLA+EPA+CSFNDCLHLGEPGCV+KGDWERYQYYFQ
Sbjct: 361 FNQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQ 420

Query: 421 LLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN- 480
           LLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN 
Sbjct: 421 LLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNE 480

Query: 481 --ELEDED-DDSLEESDPILRAMRNENQ 504
             ELEDED DDSL++ DPIL+AMRNE Q
Sbjct: 481 LDELEDEDEDDSLDKEDPILKAMRNEQQ 506

[Close]

BLAST of Sed0007662 vs. NCBI nr
Match: XP_023002660.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 886.3 bits (2289), Expect = 1.2e-253
Identity = 455/505 (90.10%), Postives = 477/505 (94.46%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHH+ +I A ASVP FG VLRR FNVRCLS+VAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHSTSIAAIASVPAFGNVLRRCFNVRCLSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFK+YSSLAPVL+PQ+ PPLSESQAIGTVAAAQANFMRVIVQSLPS+LS SSN+D
Sbjct: 61  LRAKHTFKNYSSLAPVLSPQDIPPLSESQAIGTVAAAQANFMRVIVQSLPSRLSVSSNND 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SELSGS EGDSS+ SR GIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SELSGSSEGDSSDSSRLGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FS+DQPKLEPFTLTRFLVEAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSIDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQTRIGLDSLA+IL DQT+V+VGPSGVGKSSLINALR+NN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTRIGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNN 300

Query: 301 RAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
           RA DA+EGDN FDPI  SKWFEDQRVAEVS RSGRGKHTTRHVSLLPL GGGYLADTPGF
Sbjct: 301 RAADAVEGDNWFDPIRDSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLMGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+ +LLASEPAKCSFNDCLHLGEPGCV+ GDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIRNKLLASEPAKCSFNDCLHLGEPGCVINGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN-- 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN  
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 -ELEDEDDDSLEESDPILRAMRNEN 503
            ELEDEDDDS EE DPILRAMRNEN
Sbjct: 481 DELEDEDDDSSEEDDPILRAMRNEN 505

[Close]

BLAST of Sed0007662 vs. ExPASy Swiss-Prot
Match: Q4V399 (Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=rsgA PE=2 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 7.8e-171
Identity = 311/448 (69.42%), Postives = 363/448 (81.03%), Query Frame = 0


Query: 60  LLRARHTFKDY-SSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSN 119
           +LRA+H  K+Y SSL+PVL+P+  P L ESQAIGTVA AQANFMRVIVQ + + ++   +
Sbjct: 1   MLRAKHIGKNYSSSLSPVLSPEHKPSLLESQAIGTVATAQANFMRVIVQDVANSVTSDDD 60

Query: 120 DDSELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIEN 179
           +DS             S+ G+ELLCVV+AVLKKI+RRVLVGDKV+VGSIDWVDRRGMIEN
Sbjct: 61  NDS-------------SKTGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIEN 120

Query: 180 VFQRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVD 239
           VF R SEILDPPVANVDHL+V FS+DQPKLEPFTLTRFLVEAEST IPLTL LNK EL+ 
Sbjct: 121 VFHRRSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTRIPLTLALNKTELIS 180

Query: 240 EETLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRN 299
           EE L +WK RLR W YEPLFCSV T+ GLD +AF+L DQTSV+VGPSGVGKSSLIN LR+
Sbjct: 181 EEELETWKIRLRGWNYEPLFCSVGTKDGLDDIAFVLRDQTSVIVGPSGVGKSSLINVLRS 240

Query: 300 NNRAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTP 359
           N+     +E +N F+P+LG+KWF+DQRV EVS RSGRGKHTTR+VSLLP+S GGYLADTP
Sbjct: 241 NHGG-GVVEDENWFEPMLGNKWFDDQRVGEVSSRSGRGKHTTRNVSLLPVSEGGYLADTP 300

Query: 360 GFNQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYF 419
           GFNQPSL+K+TK SLA  FPEI+  +   E  KC F DCLH+GEPGCVVKGDWERY YY 
Sbjct: 301 GFNQPSLLKVTKHSLAHCFPEIRNMI---ESEKCGFRDCLHIGEPGCVVKGDWERYPYYL 360

Query: 420 QLLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN 479
           QLLDEIRIREEFQLRTFGTKRE DVR KVGDMG + AEPRL  KKHRR+SRK+  Q++++
Sbjct: 361 QLLDEIRIREEFQLRTFGTKREDDVRYKVGDMGVKHAEPRLMPKKHRRESRKKTKQTMIS 420

Query: 480 EL---EDEDDDSLEESDPILRAMRNENQ 504
           EL   EDED D   E+DPI++A+ NEN+
Sbjct: 421 ELDEFEDEDSDLYIENDPIVQAIENENK 431

[Close]

BLAST of Sed0007662 vs. ExPASy Swiss-Prot
Match: F4HTL8 (Small ribosomal subunit biogenesis GTPase RsgA 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g67460 PE=2 SV=2)

HSP 1 Score: 285.0 bits (728), Expect = 1.6e-75
Identity = 166/298 (55.70%), Postives = 201/298 (67.45%), Query Frame = 0


Query: 2   AIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNLL 61
           A A  S+LR  T   G       FGT LR   +   LS + +  NP NV+  P P+K +L
Sbjct: 7   AAALTSILRRTTIYHGG------FGTGLRIRRSFYFLSAI-RQENP-NVTKNPHPNKTIL 66

Query: 62  RARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDDS 121
           R        S LAPVL   E P L E QAIGT+A A A++MRVIVQ +P           
Sbjct: 67  R--------SFLAPVLPLDEKPNLVELQAIGTIATALADYMRVIVQDVP----------- 126

Query: 122 ELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQ 181
                 E D+ E  + G+ELLCVV+ +LKKI R VLVGDKV+V  +DWVDRR  I NVF 
Sbjct: 127 ------ESDNGEDDKIGVELLCVVRKLLKKIGRTVLVGDKVLVDKVDWVDRRAKIINVFD 186

Query: 182 RSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEET 241
           R SE+LDPPVANVDHLV+ FS+DQPK++PFTLTRFLVEAES GI +T+ LNK ELV +E 
Sbjct: 187 RVSEVLDPPVANVDHLVILFSLDQPKIDPFTLTRFLVEAESIGIRITVALNKCELVTQEE 246

Query: 242 LVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNN 300
           + SWK RLRSW YEPLFCSV T++G+D +AF L +QTSV+VGPSGVGKSSLIN LR++
Sbjct: 247 VESWKIRLRSWNYEPLFCSVGTKVGIDEIAFNLRNQTSVIVGPSGVGKSSLINILRSS 271

[Close]

BLAST of Sed0007662 vs. ExPASy Swiss-Prot
Match: Q8YUA3 (Small ribosomal subunit biogenesis GTPase RsgA 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rsgA1 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.4e-71
Identity = 164/397 (41.31%), Postives = 228/397 (57.43%), Query Frame = 0


Query: 89  QAIGTVAAAQANFMRV-IVQSLPSQLSHSSNDDSELSGSLEGDSSEFSRHGIELLCVVKA 148
           Q +GTV A QANF +V + Q +  Q S  + ++  L   L             LLC  + 
Sbjct: 8   QLLGTVVAVQANFYKVQLDQEVREQGSRGAGEEVHLDSPLPLCPLSL------LLCTRRT 67

Query: 149 VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLVVFFSMDQPK 208
            LKKI ++V+VGD+VVV   DW   RG I +V  R +++  PP+AN D +++ F++  P 
Sbjct: 68  RLKKIGQQVMVGDRVVVEEPDWAGGRGAIADVLSRQTQLDRPPIANADQILLVFAVADPP 127

Query: 209 LEPFTLTRFLVEAESTGIPLTLVLNKLELVDEETLVSWKSRLRSWGYEPLFCSVQTRIGL 268
           LEP+ L+RFLV+AE+TG+ + L LNK +LV  E       RL +WGY+PLF SV+ +I +
Sbjct: 128 LEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQISDRLLAWGYQPLFISVENQINI 187

Query: 269 DSLAFILNDQTSVVVGPSGVGKSSLINALRNNNRAVDALEGDNRFDPILGSKWFEDQRVA 328
           D +A  L+++ +VV GPSGVGKSSLINAL  N                       + RV 
Sbjct: 188 DQIAKYLSNKITVVAGPSGVGKSSLINALIPN----------------------INLRVG 247

Query: 329 EVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKRLLAS 388
           EVS +  RG+HTTRHV L  L  GG LADTPGFNQP  +  + + L   FPE ++RL   
Sbjct: 248 EVSGKLARGRHTTRHVELFELPNGGLLADTPGFNQPD-VDCSPEELVHYFPEARERLAI- 307

Query: 389 EPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 448
             A C FNDC H  EP C V+GDWERY++Y + L +  I  + QL       E  +++K 
Sbjct: 308 --ASCRFNDCSHRDEPDCAVRGDWERYEHYLEFLAD-AIARQTQLYQ-QADPESTLKLKT 367

Query: 449 GDMGAQQAEPRLELKKHRRQSRKRVNQSILNELEDED 485
              G  Q EP+LE KK+RR SR+   Q + +  ++E+
Sbjct: 368 KGKGQSQYEPKLESKKYRRTSRRTQVQGLQDLYQEEE 370

[Close]

BLAST of Sed0007662 vs. ExPASy Swiss-Prot
Match: Q3MG79 (Small ribosomal subunit biogenesis GTPase RsgA OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rsgA PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.7e-70
Identity = 163/397 (41.06%), Postives = 227/397 (57.18%), Query Frame = 0


Query: 89  QAIGTVAAAQANFMRV-IVQSLPSQLSHSSNDDSELSGSLEGDSSEFSRHGIELLCVVKA 148
           Q +GTV A QANF +V + Q +    S  + ++  L   L             LLC  + 
Sbjct: 8   QLLGTVVAVQANFYKVQLDQDVREPGSRGAGEEVHLDSPLPLYPLSL------LLCTRRT 67

Query: 149 VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLVVFFSMDQPK 208
            LKKI ++V+VGD+VVV   DW   RG I  V  R +++  PP+AN D +++ F++  P 
Sbjct: 68  RLKKIGQQVMVGDRVVVEEPDWAGGRGAIAEVLSRQTQLDRPPIANADQILLVFAVADPP 127

Query: 209 LEPFTLTRFLVEAESTGIPLTLVLNKLELVDEETLVSWKSRLRSWGYEPLFCSVQTRIGL 268
           LEP+ L+RFLV+AE+TG+ + L LNK +LV  E       RL +WGY+PLF SV+ +I +
Sbjct: 128 LEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQISDRLLAWGYQPLFISVEKQINI 187

Query: 269 DSLAFILNDQTSVVVGPSGVGKSSLINALRNNNRAVDALEGDNRFDPILGSKWFEDQRVA 328
           D +A  L+++ +VV GPSGVGKSSLINAL  +                       + RV 
Sbjct: 188 DQIAKYLSNKITVVAGPSGVGKSSLINALIPD----------------------INLRVG 247

Query: 329 EVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKRLLAS 388
           EVS +  RG+HTTRHV L  L  GG LADTPGFNQP  +  + + L   FPE ++RL   
Sbjct: 248 EVSGKLARGRHTTRHVELFELPNGGLLADTPGFNQPD-VDCSPEELVHYFPEARERLAV- 307

Query: 389 EPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 448
             A C FNDCLH  EP C V+GDWERY++Y + L +  I  + QL       E  +++K 
Sbjct: 308 --ASCRFNDCLHRDEPDCAVRGDWERYEHYLEFLAD-AIARQTQLYQ-QADPESTLKLKT 367

Query: 449 GDMGAQQAEPRLELKKHRRQSRKRVNQSILNELEDED 485
              G  Q EP+LE KK+RR SR+   Q + +  ++E+
Sbjct: 368 KGKGQSQYEPKLESKKYRRTSRRTQVQGLQDLYQEEE 370

[Close]

BLAST of Sed0007662 vs. ExPASy Swiss-Prot
Match: B0JW21 (Small ribosomal subunit biogenesis GTPase RsgA OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rsgA PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-66
Identity = 149/383 (38.90%), Postives = 217/383 (56.66%), Query Frame = 0


Query: 92  GTVAAAQANFMRVIVQSLPSQLSHSSNDDSELSGSLEGDSSEFSRHGIELLCVVKAVLKK 151
           GTV A QANF +V +             DS + G               LLC  +A L+K
Sbjct: 11  GTVVAVQANFYQVRL-------------DSAVMGE-------------NLLCTRRARLQK 70

Query: 152 IKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLVVFFSMDQPKLEPF 211
           I + V+VGD+V V   ++ D++G I  V  RS+EI  P VAN++ +++ F++ +P L+P+
Sbjct: 71  IGQSVMVGDRVRVEEANFGDQQGAIAEVLPRSTEIDRPAVANIEQILLVFALAEPVLDPW 130

Query: 212 TLTRFLVEAESTGIPLTLVLNKLELVDEETLVSWKSRLRSWGYEPLFCSVQTRIGLDSLA 271
            ++RFLV+AESTG+ + + +NK++L + E +  W  RL  WGY P F SV+   G ++L 
Sbjct: 131 LISRFLVKAESTGLEIAVCVNKIDLGEPEQIEVWGDRLAGWGYRPFFVSVEKNRGFEALL 190

Query: 272 FILNDQTSVVVGPSGVGKSSLINALRNNNRAVDALEGDNRFDPILGSKWFEDQRVAEVSM 331
             LN + +++ GPSGVGKSSLIN L                          +QRV +VS 
Sbjct: 191 AQLNHKITLLAGPSGVGKSSLINCLIPE----------------------INQRVGDVSG 250

Query: 332 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKRLLASEPAK 391
           +  +G+HTTRHV L  L   G LAD+PGFNQP +     + L   FPE++ RL       
Sbjct: 251 KLQKGRHTTRHVQLFALPNRGLLADSPGFNQPDI-NCLPEELTFYFPEVRARLAL---GN 310

Query: 392 CSFNDCLHLGEPGCVVKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKVGDMG 451
           C FNDC H  EP CVV+GDWERYQ+Y + L+E   RE+   +T  + +E  +++K+ + G
Sbjct: 311 CQFNDCTHRREPNCVVRGDWERYQHYLEFLEEAIAREQSLQKT--STKESSLKLKIKEAG 339

Query: 452 AQQAEPRLELKKHRRQSRKRVNQ 475
            +  EP+L  KK+RR SR+  NQ
Sbjct: 371 QETYEPKLANKKYRRPSRRGKNQ 339

[Close]

BLAST of Sed0007662 vs. ExPASy TrEMBL
Match: A0A6J1BS55 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005203 PE=3 SV=1)

HSP 1 Score: 891.0 bits (2301), Expect = 2.4e-255
Identity = 459/507 (90.53%), Postives = 480/507 (94.67%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAA  ATAS+P FG VLRRFFNVRC S+VAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAA--ATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFKDYSSLAP L+PQ++PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS SSN D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEGDSSE SR G+ELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FSMDQPKLE FTLTRFL+EAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           TLVSWKSRLRSWGYEPLFCSVQT+ GLDSLA+IL DQT+V+VGPSGVGKSSLINALRNN+
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 RAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
           R VDA+EGDN FDPILGSKWFEDQRVAEVS RSGRGKHTTRHVSLLPLSGGGYLADTPGF
Sbjct: 301 RGVDAVEGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQK LLA+EPA+CSFNDCLHLGEPGCV+KGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN-- 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN  
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 -ELEDED-DDSLEESDPILRAMRNENQ 504
            ELEDED DDSL++ DPIL+AMRNE Q
Sbjct: 481 DELEDEDEDDSLDKEDPILKAMRNEQQ 505

[Close]

BLAST of Sed0007662 vs. ExPASy TrEMBL
Match: A0A6J1GIJ0 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454543 PE=3 SV=1)

HSP 1 Score: 886.7 bits (2290), Expect = 4.5e-254
Identity = 456/506 (90.12%), Postives = 478/506 (94.47%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHH+ +I A ASVP FG VLRR FNVRCLSIVAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHSTSIAAIASVPGFGNVLRRCFNVRCLSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFK+YSSLAPVL+PQ+ PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS SSN+D
Sbjct: 61  LRAKHTFKNYSSLAPVLSPQDIPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNND 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEGDS + SR GIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SERSGSLEGDSLDSSRLGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FS++QPKLEPFTLTRFLVEAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSIEQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQTRIGLDSLA+IL DQT+V+VGPSGVGKSSLINALR+NN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTRIGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNN 300

Query: 301 RAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
           RA DA+EGDN FDPI  SKWFEDQRVAEVS RSGRGKHTTRHVSLLPL GGGYLADTPGF
Sbjct: 301 RAADAVEGDNWFDPIRDSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLMGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+ +LLASEPAKCSFNDCLHLGEPGCV+ GDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIRNKLLASEPAKCSFNDCLHLGEPGCVINGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN-- 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN  
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 -ELEDEDDDSLEESDPILRAMRNENQ 504
            ELEDEDDDSLEE DPILRAMRNEN+
Sbjct: 481 DELEDEDDDSLEEDDPILRAMRNENK 506

[Close]

BLAST of Sed0007662 vs. ExPASy TrEMBL
Match: A0A6J1KPK6 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496452 PE=3 SV=1)

HSP 1 Score: 886.3 bits (2289), Expect = 5.8e-254
Identity = 455/505 (90.10%), Postives = 477/505 (94.46%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHH+ +I A ASVP FG VLRR FNVRCLS+VAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHSTSIAAIASVPAFGNVLRRCFNVRCLSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFK+YSSLAPVL+PQ+ PPLSESQAIGTVAAAQANFMRVIVQSLPS+LS SSN+D
Sbjct: 61  LRAKHTFKNYSSLAPVLSPQDIPPLSESQAIGTVAAAQANFMRVIVQSLPSRLSVSSNND 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SELSGS EGDSS+ SR GIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SELSGSSEGDSSDSSRLGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FS+DQPKLEPFTLTRFLVEAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSIDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQTRIGLDSLA+IL DQT+V+VGPSGVGKSSLINALR+NN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTRIGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNN 300

Query: 301 RAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
           RA DA+EGDN FDPI  SKWFEDQRVAEVS RSGRGKHTTRHVSLLPL GGGYLADTPGF
Sbjct: 301 RAADAVEGDNWFDPIRDSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLMGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+ +LLASEPAKCSFNDCLHLGEPGCV+ GDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIRNKLLASEPAKCSFNDCLHLGEPGCVINGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN-- 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN  
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 -ELEDEDDDSLEESDPILRAMRNEN 503
            ELEDEDDDS EE DPILRAMRNEN
Sbjct: 481 DELEDEDDDSSEEDDPILRAMRNEN 505

[Close]

BLAST of Sed0007662 vs. ExPASy TrEMBL
Match: A0A6J1BSR6 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005203 PE=3 SV=1)

HSP 1 Score: 886.3 bits (2289), Expect = 5.8e-254
Identity = 459/508 (90.35%), Postives = 480/508 (94.49%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAA  ATAS+P FG VLRRFFNVRC S+VAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAA--ATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFKDYSSLAP L+PQ++PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS SSN D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEGDSSE SR G+ELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QRSSEILDPPVANVDHL+V FSMDQPKLE FTLTRFL+EAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           TLVSWKSRLRSWGYEPLFCSVQT+ GLDSLA+IL DQT+V+VGPSGVGKSSLINALRNN+
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 RAVDALEGDNRFDP-ILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPG 360
           R VDA+EGDN FDP ILGSKWFEDQRVAEVS RSGRGKHTTRHVSLLPLSGGGYLADTPG
Sbjct: 301 RGVDAVEGDNWFDPQILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPG 360

Query: 361 FNQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQ 420
           FNQPSLMKITKQSLAQAFPEIQK LLA+EPA+CSFNDCLHLGEPGCV+KGDWERYQYYFQ
Sbjct: 361 FNQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQ 420

Query: 421 LLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN- 480
           LLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN 
Sbjct: 421 LLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNE 480

Query: 481 --ELEDED-DDSLEESDPILRAMRNENQ 504
             ELEDED DDSL++ DPIL+AMRNE Q
Sbjct: 481 LDELEDEDEDDSLDKEDPILKAMRNEQQ 506

[Close]

BLAST of Sed0007662 vs. ExPASy TrEMBL
Match: A0A5A7VEI9 (Putative ribosome biogenesis GTPase RsgA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00400 PE=3 SV=1)

HSP 1 Score: 877.1 bits (2265), Expect = 3.5e-251
Identity = 446/503 (88.67%), Postives = 472/503 (93.84%), Query Frame = 0


Query: 1   MAIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAA+ AT+S P+FG V+RR F  RC SIVAK HNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDD 120
           LRA+HTFKDYSSLAPVL+PQ++PPLSESQAIGTVAAAQANFMRVIVQ+LPSQ S SSNDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120

Query: 121 SELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            E SGSLE DSSE S  G+ELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEE 240
           QR SEILDPPVANVDHL+V FSMDQP+LEPFTLTRFLVEAESTGIPLTL LNKLELVDEE
Sbjct: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQT  GLD+LA+IL DQT+V+VGPSGVGKSSLINALRNNN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300

Query: 301 RAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
           RA DAL+ DN FDPILGSKWFEDQRVAEVS RSGRGKHTTRHVSLLPL+GGGYLADTPGF
Sbjct: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQK L ASEPAKCSFNDCLHLGEPGC++KGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG MGAQQAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 EDEDDDSLEESDPILRAMRNENQ 504
            DED+D LEE+DPILRAM+NENQ
Sbjct: 481 -DEDEDDLEETDPILRAMKNENQ 502

[Close]

BLAST of Sed0007662 vs. TAIR 10
Match: AT1G67440.1 (Minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 601.7 bits (1550), Expect = 5.5e-172
Identity = 311/448 (69.42%), Postives = 363/448 (81.03%), Query Frame = 0


Query: 60  LLRARHTFKDY-SSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSN 119
           +LRA+H  K+Y SSL+PVL+P+  P L ESQAIGTVA AQANFMRVIVQ + + ++   +
Sbjct: 1   MLRAKHIGKNYSSSLSPVLSPEHKPSLLESQAIGTVATAQANFMRVIVQDVANSVTSDDD 60

Query: 120 DDSELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIEN 179
           +DS             S+ G+ELLCVV+AVLKKI+RRVLVGDKV+VGSIDWVDRRGMIEN
Sbjct: 61  NDS-------------SKTGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIEN 120

Query: 180 VFQRSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVD 239
           VF R SEILDPPVANVDHL+V FS+DQPKLEPFTLTRFLVEAEST IPLTL LNK EL+ 
Sbjct: 121 VFHRRSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTRIPLTLALNKTELIS 180

Query: 240 EETLVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRN 299
           EE L +WK RLR W YEPLFCSV T+ GLD +AF+L DQTSV+VGPSGVGKSSLIN LR+
Sbjct: 181 EEELETWKIRLRGWNYEPLFCSVGTKDGLDDIAFVLRDQTSVIVGPSGVGKSSLINVLRS 240

Query: 300 NNRAVDALEGDNRFDPILGSKWFEDQRVAEVSMRSGRGKHTTRHVSLLPLSGGGYLADTP 359
           N+     +E +N F+P+LG+KWF+DQRV EVS RSGRGKHTTR+VSLLP+S GGYLADTP
Sbjct: 241 NHGG-GVVEDENWFEPMLGNKWFDDQRVGEVSSRSGRGKHTTRNVSLLPVSEGGYLADTP 300

Query: 360 GFNQPSLMKITKQSLAQAFPEIQKRLLASEPAKCSFNDCLHLGEPGCVVKGDWERYQYYF 419
           GFNQPSL+K+TK SLA  FPEI+  +   E  KC F DCLH+GEPGCVVKGDWERY YY 
Sbjct: 301 GFNQPSLLKVTKHSLAHCFPEIRNMI---ESEKCGFRDCLHIGEPGCVVKGDWERYPYYL 360

Query: 420 QLLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILN 479
           QLLDEIRIREEFQLRTFGTKRE DVR KVGDMG + AEPRL  KKHRR+SRK+  Q++++
Sbjct: 361 QLLDEIRIREEFQLRTFGTKREDDVRYKVGDMGVKHAEPRLMPKKHRRESRKKTKQTMIS 420

Query: 480 EL---EDEDDDSLEESDPILRAMRNENQ 504
           EL   EDED D   E+DPI++A+ NEN+
Sbjct: 421 ELDEFEDEDSDLYIENDPIVQAIENENK 431

[Close]

BLAST of Sed0007662 vs. TAIR 10
Match: AT1G67460.1 (Minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-76
Identity = 166/298 (55.70%), Postives = 201/298 (67.45%), Query Frame = 0


Query: 2   AIASISMLRHHTAAIGATASVPIFGTVLRRFFNVRCLSIVAKHHNPNNVSNKPPPSKNLL 61
           A A  S+LR  T   G       FGT LR   +   LS + +  NP NV+  P P+K +L
Sbjct: 7   AAALTSILRRTTIYHGG------FGTGLRIRRSFYFLSAI-RQENP-NVTKNPHPNKTIL 66

Query: 62  RARHTFKDYSSLAPVLTPQESPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSHSSNDDS 121
           R        S LAPVL   E P L E QAIGT+A A A++MRVIVQ +P           
Sbjct: 67  R--------SFLAPVLPLDEKPNLVELQAIGTIATALADYMRVIVQDVP----------- 126

Query: 122 ELSGSLEGDSSEFSRHGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQ 181
                 E D+ E  + G+ELLCVV+ +LKKI R VLVGDKV+V  +DWVDRR  I NVF 
Sbjct: 127 ------ESDNGEDDKIGVELLCVVRKLLKKIGRTVLVGDKVLVDKVDWVDRRAKIINVFD 186

Query: 182 RSSEILDPPVANVDHLVVFFSMDQPKLEPFTLTRFLVEAESTGIPLTLVLNKLELVDEET 241
           R SE+LDPPVANVDHLV+ FS+DQPK++PFTLTRFLVEAES GI +T+ LNK ELV +E 
Sbjct: 187 RVSEVLDPPVANVDHLVILFSLDQPKIDPFTLTRFLVEAESIGIRITVALNKCELVTQEE 246

Query: 242 LVSWKSRLRSWGYEPLFCSVQTRIGLDSLAFILNDQTSVVVGPSGVGKSSLINALRNN 300
           + SWK RLRSW YEPLFCSV T++G+D +AF L +QTSV+VGPSGVGKSSLIN LR++
Sbjct: 247 VESWKIRLRSWNYEPLFCSVGTKVGIDEIAFNLRNQTSVIVGPSGVGKSSLINILRSS 271

The following BLAST results are available for this feature:

BLAST of Sed0007662 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132325.1	4.9e-255	90.53	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 [Momo...	[more]
XP_023536955.1	1.4e-254	90.12	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucurbita pepo ...	[more]
XP_022951811.1	9.2e-254	90.12	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like [Cucurbita ...	[more]
XP_022132324.1	1.2e-253	90.35	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1 [Momo...	[more]
XP_023002660.1	1.2e-253	90.10	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucurbita maxim...	[more]

BLAST of Sed0007662 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4V399	7.8e-171	69.42	Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Arabidopsis t...	[more]
F4HTL8	1.6e-75	55.70	Small ribosomal subunit biogenesis GTPase RsgA 2, mitochondrial OS=Arabidopsis t...	[more]
Q8YUA3	5.4e-71	41.31	Small ribosomal subunit biogenesis GTPase RsgA 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
Q3MG79	2.7e-70	41.06	Small ribosomal subunit biogenesis GTPase RsgA OS=Trichormus variabilis (strain ...	[more]
B0JW21	4.0e-66	38.90	Small ribosomal subunit biogenesis GTPase RsgA OS=Microcystis aeruginosa (strain...	[more]

BLAST of Sed0007662 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BS55	2.4e-255	90.53	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 OS=Mo...	[more]
A0A6J1GIJ0	4.5e-254	90.12	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like OS=Cucurbit...	[more]
A0A6J1KPK6	5.8e-254	90.10	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Cucurbita max...	[more]
A0A6J1BSR6	5.8e-254	90.35	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1 OS=Mo...	[more]
A0A5A7VEI9	3.5e-251	88.67	Putative ribosome biogenesis GTPase RsgA 1 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Sed0007662 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67440.1	5.5e-172	69.42	Minichromosome maintenance (MCM2/3/5) family protein	[more]
AT1G67460.1	1.1e-76	55.70	Minichromosome maintenance (MCM2/3/5) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 178..365 e-value: 4.3E-49 score: 168.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 186..427
None	No IPR available	GENE3D	1.10.40.50	Probable gtpase engc; domain 3	coord: 367..429 e-value: 4.4E-14 score: 53.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..131
None	No IPR available	PANTHER	PTHR32120:SF11	SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED	coord: 80..445
IPR004881	Ribosome biogenesis GTPase RsgA	TIGRFAM	TIGR00157	TIGR00157	coord: 156..299 e-value: 1.5E-35 score: 120.9
IPR004881	Ribosome biogenesis GTPase RsgA	PANTHER	PTHR32120	SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA	coord: 80..445
IPR004881	Ribosome biogenesis GTPase RsgA	HAMAP	MF_01820	GTPase_RsgA	coord: 90..428 score: 29.954773
IPR004881	Ribosome biogenesis GTPase RsgA	CDD	cd01854	YjeQ_EngC	coord: 192..422 e-value: 3.12157E-83 score: 253.474
IPR010914	RsgA GTPase domain	PFAM	PF03193	RsgA_GTPase	coord: 179..365 e-value: 2.6E-57 score: 193.4
IPR010914	RsgA GTPase domain	PROSITE	PS50936	ENGC_GTPASE	coord: 192..361 score: 42.174217
IPR030378	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain	PROSITE	PS51721	G_CP	coord: 183..363 score: 51.579918
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 92..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007662.1	Sed0007662.1	mRNA
Sed0007662.2	Sed0007662.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding