Sed0007485 (gene) Chayote v1

Overview


Name	Sed0007485
Type	gene
Organism	Sechium edule (Chayote v1)
Description	MYND-type domain-containing protein
Location	LG08: 37395470 .. 37396982 (+)
RNA-Seq Expression	Sed0007485
Synteny	Sed0007485

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAGAGATATAAATTTAACGCACACGATTCGTTTTGCCGTCACTACATGCTTTCTCAAACAACGATCCAAATCTGGCTTCATTTCATCCGCCATTAACGGACCTCCATTTTTGCAGTCCTTCCATGGCGGTTTCATTTTCAAGGTGAAGGCCACAACGAGAACCAATCCATTACACTCCGGCATGGTGTGCAATAAAAGGAGACGAACTTCCACCACCACCACCGACGCCGGGATTTCTGATCCCTTCGACGGTTTACCGGACGATCTACTTGTTGTCATCCTCGGAAAGCTTAGCGTCGCCGCTTCTTCTCCTTCCGATCTCTTCAATGTTATGTCGACGTAAGAATCGATTAATTCGTGAATTGCTTAATTTCTCAGTCCATTGTAGTTTTTGTTTGATGTTTTGTTTGTGAATAATAGATGTAAGAGGTTCAATCGATTGGCTCTGCATCCGATTGTGCTGTCGAAAACTGGACCTAAAGCATTTGAAATCAGTACCAAAACCTGGTGCGATTCGGCTCATCGATTTCTCAAATCATGCGTTTCTGCCGGTAACGTTGAAGCGTGCTACACTCTCGGAATGGTCCGTACGATTGATGAACTTTCCTCGCTGCAATTTCAAAATCTGTGATTATTTCGAATCTGAAATCGGTTAGGTTTTTGTTTTCTGTTTTCAATTTCTGCTGCAGATCGAGTTTTATTGCTTGAAGAACAGAGGAATTGGAGCTTCGTTAATGGCGAAGGCCGCGATGAAATCTCATCCGTTGGCGCTTTACTCGCTCGCAATCGTACAATTCAACGGAAGCGGTAGTTCGAAGCGAGAAAAGAATCTCCGCGCCGGTGTTGCGTTGTGCGGACGCGCCGCCTATCTCGGCCACATCGACGCGCTTCGCGAGCTAGGCCACTGCCTTCAAGACGGTTACGGCGTCGCTCAAAACCCATCTCAGGGACGTCGTCTGTTAATCGAAGCCAACGCGCGTGAGATCGCGTGCGTATCAAACGCCTCCCTCCGCCGTCGTCTCCACTGCTCCGACGACGGCCCGTTCGCGGCGGATTCCGGCGGATCGGTTCTCGGTGATTTCGTCTTTAAGATTCCTGAACCGGAGGCTCATCCAGCGAACCGATTCTTAAGAGATTGGTTCGCATCGGGCCGTGGATCTATCGGTGAGGCACTGAGATTCTGCTCTAATGGCGGTTGCGGAAGGCCGGAGACTCGGCTTAATGAATTCCGGCGGTGCTCGGTTTGTGGAAATGTGAACTACTGTTCACGAGGTTGCCAAGCTCTGGACTGGAAATTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGTTGATCGAGGACGATGACCTCGAAGGCGGCGACGACGGCGGCGACGGTGTAAACAGAATGGAGCCATTTGGAGACGGTGAGAATGTGGAATCTGAATGATATTTGCTGTTTGACATTAATTTATCTTTTTTTTTTAATTCTTTTATTTTATTTGTTACTCTATAGTCTTGTTTTTT

mRNA sequence

GCTAAGAGATATAAATTTAACGCACACGATTCGTTTTGCCGTCACTACATGCTTTCTCAAACAACGATCCAAATCTGGCTTCATTTCATCCGCCATTAACGGACCTCCATTTTTGCAGTCCTTCCATGGCGGTTTCATTTTCAAGGTGAAGGCCACAACGAGAACCAATCCATTACACTCCGGCATGGTGTGCAATAAAAGGAGACGAACTTCCACCACCACCACCGACGCCGGGATTTCTGATCCCTTCGACGGTTTACCGGACGATCTACTTGTTGTCATCCTCGGAAAGCTTAGCGTCGCCGCTTCTTCTCCTTCCGATCTCTTCAATGTTATGTCGACATGTAAGAGGTTCAATCGATTGGCTCTGCATCCGATTGTGCTGTCGAAAACTGGACCTAAAGCATTTGAAATCAGTACCAAAACCTGGTGCGATTCGGCTCATCGATTTCTCAAATCATGCGTTTCTGCCGGTAACGTTGAAGCGTGCTACACTCTCGGAATGATCGAGTTTTATTGCTTGAAGAACAGAGGAATTGGAGCTTCGTTAATGGCGAAGGCCGCGATGAAATCTCATCCGTTGGCGCTTTACTCGCTCGCAATCGTACAATTCAACGGAAGCGGTAGTTCGAAGCGAGAAAAGAATCTCCGCGCCGGTGTTGCGTTGTGCGGACGCGCCGCCTATCTCGGCCACATCGACGCGCTTCGCGAGCTAGGCCACTGCCTTCAAGACGGTTACGGCGTCGCTCAAAACCCATCTCAGGGACGTCGTCTGTTAATCGAAGCCAACGCGCGTGAGATCGCGTGCGTATCAAACGCCTCCCTCCGCCGTCGTCTCCACTGCTCCGACGACGGCCCGTTCGCGGCGGATTCCGGCGGATCGGTTCTCGGTGATTTCGTCTTTAAGATTCCTGAACCGGAGGCTCATCCAGCGAACCGATTCTTAAGAGATTGGTTCGCATCGGGCCGTGGATCTATCGGTGAGGCACTGAGATTCTGCTCTAATGGCGGTTGCGGAAGGCCGGAGACTCGGCTTAATGAATTCCGGCGGTGCTCGGTTTGTGGAAATGTGAACTACTGTTCACGAGGTTGCCAAGCTCTGGACTGGAAATTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGTTGATCGAGGACGATGACCTCGAAGGCGGCGACGACGGCGGCGACGGTGTAAACAGAATGGAGCCATTTGGAGACGGTGAGAATGTGGAATCTGAATGATATTTGCTGTTTGACATTAATTTATCTTTTTTTTTTAATTCTTTTATTTTATTTGTTACTCTATAGTCTTGTTTTTT

Coding sequence (CDS)

ATGGTGTGCAATAAAAGGAGACGAACTTCCACCACCACCACCGACGCCGGGATTTCTGATCCCTTCGACGGTTTACCGGACGATCTACTTGTTGTCATCCTCGGAAAGCTTAGCGTCGCCGCTTCTTCTCCTTCCGATCTCTTCAATGTTATGTCGACATGTAAGAGGTTCAATCGATTGGCTCTGCATCCGATTGTGCTGTCGAAAACTGGACCTAAAGCATTTGAAATCAGTACCAAAACCTGGTGCGATTCGGCTCATCGATTTCTCAAATCATGCGTTTCTGCCGGTAACGTTGAAGCGTGCTACACTCTCGGAATGATCGAGTTTTATTGCTTGAAGAACAGAGGAATTGGAGCTTCGTTAATGGCGAAGGCCGCGATGAAATCTCATCCGTTGGCGCTTTACTCGCTCGCAATCGTACAATTCAACGGAAGCGGTAGTTCGAAGCGAGAAAAGAATCTCCGCGCCGGTGTTGCGTTGTGCGGACGCGCCGCCTATCTCGGCCACATCGACGCGCTTCGCGAGCTAGGCCACTGCCTTCAAGACGGTTACGGCGTCGCTCAAAACCCATCTCAGGGACGTCGTCTGTTAATCGAAGCCAACGCGCGTGAGATCGCGTGCGTATCAAACGCCTCCCTCCGCCGTCGTCTCCACTGCTCCGACGACGGCCCGTTCGCGGCGGATTCCGGCGGATCGGTTCTCGGTGATTTCGTCTTTAAGATTCCTGAACCGGAGGCTCATCCAGCGAACCGATTCTTAAGAGATTGGTTCGCATCGGGCCGTGGATCTATCGGTGAGGCACTGAGATTCTGCTCTAATGGCGGTTGCGGAAGGCCGGAGACTCGGCTTAATGAATTCCGGCGGTGCTCGGTTTGTGGAAATGTGAACTACTGTTCACGAGGTTGCCAAGCTCTGGACTGGAAATTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGTTGATCGAGGACGATGACCTCGAAGGCGGCGACGACGGCGGCGACGGTGTAAACAGAATGGAGCCATTTGGAGACGGTGAGAATGTGGAATCTGAATGA

Protein sequence

MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRLALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGASLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVFKIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE

Homology

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BLAST of Sed0007485 vs. NCBI nr
Match: XP_008439699.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [Cucumis melo var. makuwa] >TYJ99256.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 597.8 bits (1540), Expect = 6.0e-167
Identity = 294/354 (83.05%), Postives = 313/354 (88.42%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           M+CNKRRRTS T+  AGISD FDGLPDDL+VV+LGKLS  ASSPSDL NVM TCKRFNRL
Sbjct: 1   MLCNKRRRTS-TSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHPIVLSK GPKAFEI TK W +S HRFLK CVSAGNVEACYTLGMIEFYCLKNRG GA
Sbjct: 61  ALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAAYLGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGV QN S+GRRLLIEANARE+A ++N+SL RRLHCS     A DSGGS+L DF  
Sbjct: 181 LQDGYGVPQNASEGRRLLIEANARELAYITNSSL-RRLHCSSHRQSATDSGGSLLSDFGC 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
             P PEAHPAN+FLRDWFASGRGSI E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKLRHKTECAPFDRWLIED++LEG +DG  GVNR+E FGDGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDEELEGDEDG--GVNRIEQFGDGENVESE 350

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BLAST of Sed0007485 vs. NCBI nr
Match: XP_038894785.1 (F-box protein At1g67340 [Benincasa hispida])

HSP 1 Score: 594.7 bits (1532), Expect = 5.1e-166
Identity = 295/354 (83.33%), Postives = 311/354 (87.85%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           M+CNKRRRTST+   AGISD FDGLPDDL+VV+LGKLS  ASSPSDL NVM TCKRFNRL
Sbjct: 1   MLCNKRRRTSTSAA-AGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHPIVLSK GPK FEI TK W +S HRFLK CVSAGNVEACYTLGMIEFYCLKNRG GA
Sbjct: 61  ALHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAAYLGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGV QN S+GRRLLIEANARE+  ++N+SL RRLHCS D P A DSGGS+L DF  
Sbjct: 181 LQDGYGVPQNASEGRRLLIEANARELTSITNSSL-RRLHCSGDLPSAMDSGGSLLSDFGC 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
             P  EAHPANRFLRDWFASGRG + E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NFPAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKLRHKTECAPFDRWLIEDDDLE GDD GD VNR+E FGDGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLE-GDDNGD-VNRIEQFGDGENVESE 350

[Close]

BLAST of Sed0007485 vs. NCBI nr
Match: XP_004154118.1 (F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_013400 [Cucumis sativus])

HSP 1 Score: 591.3 bits (1523), Expect = 5.6e-165
Identity = 292/354 (82.49%), Postives = 310/354 (87.57%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           M+CNKRRRTST+    GISD FDGLPDDL+VV+LGKLS  ASSP DL NVM TCKRFNRL
Sbjct: 1   MLCNKRRRTSTSAA-TGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHPIVLSK GPKAFEI TK W +S HRFLK CVSAGNVEACYTLGMIEFYCLKNRG GA
Sbjct: 61  ALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAAYLGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGV QN S+GRRLLIEANARE+A ++N+SL RRLHCS     A DSGGS+L DF  
Sbjct: 181 LQDGYGVPQNVSEGRRLLIEANARELAYITNSSL-RRLHCSRHRQSATDSGGSLLSDFGC 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
             P PEAHPAN+FLRDWFASGRGSI E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKLRHKTECAPFDRWLIE+D+LEG DDGG  VNR+E F DGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEEDELEGDDDGG-VVNRIEQFDDGENVESE 351

[Close]

BLAST of Sed0007485 vs. NCBI nr
Match: XP_023519168.1 (F-box protein At5g50450-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589.3 bits (1518), Expect = 2.1e-164
Identity = 291/354 (82.20%), Postives = 308/354 (87.01%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           MVCNKRRRTS T+TDAGISD FDGLPDDL+VV+LGKLS AASSPSD+ NVM TCKRFNRL
Sbjct: 1   MVCNKRRRTS-TSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMRTCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHP VL K GPK FEI T  W +S HRFLK CVSAGNVEACYTLGMIEFYCLKNRG GA
Sbjct: 61  ALHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAAYLGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGVAQN S+GRRLLIEANARE+A ++N+SL  RLHC  D P A DS  S+L DF  
Sbjct: 181 LQDGYGVAQNASEGRRLLIEANARELASITNSSL-LRLHCCGDRPPATDSSESLLSDFGC 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
           K P PE HPAN+FLRDWFASGRG I E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 KFPAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKLRHKTECAPFDRWLIEDDDLEG DDG   VNR+E  GDGE+VESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDG--DVNRIEQLGDGEDVESE 350

[Close]

BLAST of Sed0007485 vs. NCBI nr
Match: XP_022994416.1 (F-box protein At5g50450-like [Cucurbita maxima])

HSP 1 Score: 586.6 bits (1511), Expect = 1.4e-163
Identity = 288/354 (81.36%), Postives = 309/354 (87.29%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           MVCNKRRRTSTTT  AGI D FD LPDDLLV++LGKLS  ASSPSDL NVM TCKRFNRL
Sbjct: 1   MVCNKRRRTSTTTA-AGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHP+VLSK GPKAFEI  K WC+S HRFLK CVSAGNVEACYTLGM+EFYC+KNRG GA
Sbjct: 61  ALHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAA LGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGVAQN S+GRRLLIEANARE+A ++N+SL RRL+CS D P   DS GS+L DF +
Sbjct: 181 LQDGYGVAQNASEGRRLLIEANARELASITNSSL-RRLNCSVDRPSTTDSSGSLLSDFGY 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
            IP PE HPAN+FLRDWF SGRG I E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NIPAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKL+HKTECAPFDRWLIEDDDLE  DD  DGVNR+E FGDG NVE+E
Sbjct: 301 RGCQALDWKLQHKTECAPFDRWLIEDDDLE--DDDDDGVNRIEQFGDGVNVETE 350

[Close]

BLAST of Sed0007485 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.4e-112
Identity = 201/341 (58.94%), Postives = 245/341 (71.85%), Query Frame = 0


Query: 19  SDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRLALHPIVLSKTGPKAFEIS 78
           +D  D +PDDL++ IL KL   +  P+D  NV+ TCKR   LA++PIVLS+  PKA  + 
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 79  TKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGASLMAKAAMKSHPLALYSL 138
              W + +HRFLK CV AG++EACYTLGMI FYCL+NRG GASLMAKAA+ SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 139 AIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVAQNPSQGRRLL 198
           A++QFNGSG SK +K+LRAGVALC RAA+LGH+DALRELGHCLQDGYGV QN S+GRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 199 IEANAREIACVSNASLRRR---LHCSDDGPFAADSGGS----VLGDFVFKIPEPEAHPAN 258
           ++ANARE+A V ++ ++ R   L  S   P    + G     +L DF   +P PE HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 259 RFLRDWFASGRGSI-GEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCSRGCQALDWKL 318
           RFL DWFA   G   G+ LR CS+ GCGRPETR +EFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 319 RHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENV 352
           RHK +CAP  RWL E        DGG+G  +++  G+G+NV
Sbjct: 341 RHKMDCAPVQRWLEE-------GDGGEGNVQIDGNGNGDNV 374

[Close]

BLAST of Sed0007485 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-110
Identity = 193/332 (58.13%), Postives = 244/332 (73.49%), Query Frame = 0


Query: 4   NKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRLALH 63
           NK++R      +  +++ F+ L DDL++ IL KL+ +ASSPSD   V+STCKR NRL LH
Sbjct: 5   NKKQRLENNHNNT-VNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLH 64

Query: 64  PIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGASLM 123
           P+VLSK G +   ++ + W DS+H+FLK CV+AGN++A Y+LGMI FYCL+N   GASLM
Sbjct: 65  PLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLM 124

Query: 124 AKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHCLQD 183
           AKAA+KSH  ALYSL+++QFNGSG SK +KNLRAGVALC R+AYLGH+DALRELGHCLQD
Sbjct: 125 AKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQD 184

Query: 184 GYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVFKIP 243
           GYGV ++ S+GRRLLI+ANARE+AC   + L   L   D+     D         +  +P
Sbjct: 185 GYGVPRDVSEGRRLLIQANARELACSLRSYL--SLKSGDENETLTD---------LSVVP 244

Query: 244 EPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCSRGC 303
             E HP NRFL++WF+SGR  + E LR CS+GGCGRPETR +EFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 304 QALDWKLRHKTECAPFDRWLIEDDDLEGGDDG 336
           QALDW+ +HK EC P D W+    ++  GDDG
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI--GDDG 322

[Close]

BLAST of Sed0007485 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 4.0e-04
Identity = 19/40 (47.50%), Postives = 25/40 (62.50%), Query Frame = 0


Query: 277 CGRPETRLNEFRRCSVCGNVNYCSRGCQALDWKLRHKTEC 317
           C +  T + E ++CS C  + YCS+ CQ  DWKL HK EC
Sbjct: 26  CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64

[Close]

BLAST of Sed0007485 vs. ExPASy Swiss-Prot
Match: Q9SJA1 (Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 8.9e-04
Identity = 22/57 (38.60%), Postives = 30/57 (52.63%), Query Frame = 0


Query: 277 CGRPETRLNEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF---DRWLIEDDDLE 331
           CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F   D   +  DD++
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRSTDSSPVRRDDID 118

[Close]

BLAST of Sed0007485 vs. ExPASy TrEMBL
Match: A0A5A7UP50 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 2.9e-167
Identity = 294/354 (83.05%), Postives = 313/354 (88.42%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           M+CNKRRRTS T+  AGISD FDGLPDDL+VV+LGKLS  ASSPSDL NVM TCKRFNRL
Sbjct: 1   MLCNKRRRTS-TSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHPIVLSK GPKAFEI TK W +S HRFLK CVSAGNVEACYTLGMIEFYCLKNRG GA
Sbjct: 61  ALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAAYLGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGV QN S+GRRLLIEANARE+A ++N+SL RRLHCS     A DSGGS+L DF  
Sbjct: 181 LQDGYGVPQNASEGRRLLIEANARELAYITNSSL-RRLHCSSHRQSATDSGGSLLSDFGC 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
             P PEAHPAN+FLRDWFASGRGSI E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKLRHKTECAPFDRWLIED++LEG +DG  GVNR+E FGDGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDEELEGDEDG--GVNRIEQFGDGENVESE 350

[Close]

BLAST of Sed0007485 vs. ExPASy TrEMBL
Match: A0A1S3AZD5 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 2.9e-167
Identity = 294/354 (83.05%), Postives = 313/354 (88.42%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           M+CNKRRRTS T+  AGISD FDGLPDDL+VV+LGKLS  ASSPSDL NVM TCKRFNRL
Sbjct: 1   MLCNKRRRTS-TSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHPIVLSK GPKAFEI TK W +S HRFLK CVSAGNVEACYTLGMIEFYCLKNRG GA
Sbjct: 61  ALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAAYLGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGV QN S+GRRLLIEANARE+A ++N+SL RRLHCS     A DSGGS+L DF  
Sbjct: 181 LQDGYGVPQNASEGRRLLIEANARELAYITNSSL-RRLHCSSHRQSATDSGGSLLSDFGC 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
             P PEAHPAN+FLRDWFASGRGSI E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKLRHKTECAPFDRWLIED++LEG +DG  GVNR+E FGDGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDEELEGDEDG--GVNRIEQFGDGENVESE 350

[Close]

BLAST of Sed0007485 vs. ExPASy TrEMBL
Match: A0A0A0LTV0 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.7e-165
Identity = 292/354 (82.49%), Postives = 310/354 (87.57%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           M+CNKRRRTST+    GISD FDGLPDDL+VV+LGKLS  ASSP DL NVM TCKRFNRL
Sbjct: 1   MLCNKRRRTSTSAA-TGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHPIVLSK GPKAFEI TK W +S HRFLK CVSAGNVEACYTLGMIEFYCLKNRG GA
Sbjct: 61  ALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAAYLGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGV QN S+GRRLLIEANARE+A ++N+SL RRLHCS     A DSGGS+L DF  
Sbjct: 181 LQDGYGVPQNVSEGRRLLIEANARELAYITNSSL-RRLHCSRHRQSATDSGGSLLSDFGC 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
             P PEAHPAN+FLRDWFASGRGSI E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKLRHKTECAPFDRWLIE+D+LEG DDGG  VNR+E F DGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEEDELEGDDDGG-VVNRIEQFDDGENVESE 351

[Close]

BLAST of Sed0007485 vs. ExPASy TrEMBL
Match: A0A6J1JZ31 (F-box protein At5g50450-like OS=Cucurbita maxima OX=3661 GN=LOC111490141 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.7e-164
Identity = 288/354 (81.36%), Postives = 309/354 (87.29%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           MVCNKRRRTSTTT  AGI D FD LPDDLLV++LGKLS  ASSPSDL NVM TCKRFNRL
Sbjct: 1   MVCNKRRRTSTTTA-AGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHP+VLSK GPKAFEI  K WC+S HRFLK CVSAGNVEACYTLGM+EFYC+KNRG GA
Sbjct: 61  ALHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAA LGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGVAQN S+GRRLLIEANARE+A ++N+SL RRL+CS D P   DS GS+L DF +
Sbjct: 181 LQDGYGVAQNASEGRRLLIEANARELASITNSSL-RRLNCSVDRPSTTDSSGSLLSDFGY 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
            IP PE HPAN+FLRDWF SGRG I E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NIPAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKL+HKTECAPFDRWLIEDDDLE  DD  DGVNR+E FGDG NVE+E
Sbjct: 301 RGCQALDWKLQHKTECAPFDRWLIEDDDLE--DDDDDGVNRIEQFGDGVNVETE 350

[Close]

BLAST of Sed0007485 vs. ExPASy TrEMBL
Match: A0A6J1GUJ3 (F-box protein At5g50450 OS=Cucurbita moschata OX=3662 GN=LOC111457247 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.7e-164
Identity = 288/354 (81.36%), Postives = 309/354 (87.29%), Query Frame = 0


Query: 1   MVCNKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRL 60
           MVCNKRRRTSTTT  AGI D FD LPDDLLV++LGKLS  ASSPSDL NVM TCKRFNRL
Sbjct: 1   MVCNKRRRTSTTTA-AGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRL 60

Query: 61  ALHPIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGA 120
           ALHP+VLSK GPKAFEI  K WC+S HRFLK CVSAGNVEACYTLGM+EFYC+KNRG GA
Sbjct: 61  ALHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGA 120

Query: 121 SLMAKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHC 180
           SLMAKAA+KSHPLALYSLAIVQFNGSG SK +KNLRAGVALCGRAA LGHIDALRELGHC
Sbjct: 121 SLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHC 180

Query: 181 LQDGYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVF 240
           LQDGYGVAQN S+GRRLLIEANARE+A ++N+SL RRL+CS D P   DS GS+L DF +
Sbjct: 181 LQDGYGVAQNASEGRRLLIEANARELASITNSSL-RRLNCSVDRPTTTDSSGSLLSDFGY 240

Query: 241 KIPEPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCS 300
            IP PE HPAN+FLRDWF SGRG I E LR CSN GCGRPETRL+EFRRCSVCGNVNYCS
Sbjct: 241 NIPAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENVESE 355
           RGCQALDWKL+HKTECAPFDRWLIEDDDLE  DD  DGVNR+E FGDG NVE+E
Sbjct: 301 RGCQALDWKLQHKTECAPFDRWLIEDDDLE--DDDDDGVNRIEQFGDGVNVETE 350

[Close]

BLAST of Sed0007485 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 406.4 bits (1043), Expect = 2.4e-113
Identity = 201/341 (58.94%), Postives = 245/341 (71.85%), Query Frame = 0


Query: 19  SDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRLALHPIVLSKTGPKAFEIS 78
           +D  D +PDDL++ IL KL   +  P+D  NV+ TCKR   LA++PIVLS+  PKA  + 
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 79  TKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGASLMAKAAMKSHPLALYSL 138
              W + +HRFLK CV AG++EACYTLGMI FYCL+NRG GASLMAKAA+ SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 139 AIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVAQNPSQGRRLL 198
           A++QFNGSG SK +K+LRAGVALC RAA+LGH+DALRELGHCLQDGYGV QN S+GRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 199 IEANAREIACVSNASLRRR---LHCSDDGPFAADSGGS----VLGDFVFKIPEPEAHPAN 258
           ++ANARE+A V ++ ++ R   L  S   P    + G     +L DF   +P PE HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 259 RFLRDWFASGRGSI-GEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCSRGCQALDWKL 318
           RFL DWFA   G   G+ LR CS+ GCGRPETR +EFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 319 RHKTECAPFDRWLIEDDDLEGGDDGGDGVNRMEPFGDGENV 352
           RHK +CAP  RWL E        DGG+G  +++  G+G+NV
Sbjct: 341 RHKMDCAPVQRWLEE-------GDGGEGNVQIDGNGNGDNV 374

[Close]

BLAST of Sed0007485 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 401.4 bits (1030), Expect = 7.7e-112
Identity = 193/332 (58.13%), Postives = 244/332 (73.49%), Query Frame = 0


Query: 4   NKRRRTSTTTTDAGISDPFDGLPDDLLVVILGKLSVAASSPSDLFNVMSTCKRFNRLALH 63
           NK++R      +  +++ F+ L DDL++ IL KL+ +ASSPSD   V+STCKR NRL LH
Sbjct: 5   NKKQRLENNHNNT-VNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLH 64

Query: 64  PIVLSKTGPKAFEISTKTWCDSAHRFLKSCVSAGNVEACYTLGMIEFYCLKNRGIGASLM 123
           P+VLSK G +   ++ + W DS+H+FLK CV+AGN++A Y+LGMI FYCL+N   GASLM
Sbjct: 65  PLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLM 124

Query: 124 AKAAMKSHPLALYSLAIVQFNGSGSSKREKNLRAGVALCGRAAYLGHIDALRELGHCLQD 183
           AKAA+KSH  ALYSL+++QFNGSG SK +KNLRAGVALC R+AYLGH+DALRELGHCLQD
Sbjct: 125 AKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQD 184

Query: 184 GYGVAQNPSQGRRLLIEANAREIACVSNASLRRRLHCSDDGPFAADSGGSVLGDFVFKIP 243
           GYGV ++ S+GRRLLI+ANARE+AC   + L   L   D+     D         +  +P
Sbjct: 185 GYGVPRDVSEGRRLLIQANARELACSLRSYL--SLKSGDENETLTD---------LSVVP 244

Query: 244 EPEAHPANRFLRDWFASGRGSIGEALRFCSNGGCGRPETRLNEFRRCSVCGNVNYCSRGC 303
             E HP NRFL++WF+SGR  + E LR CS+GGCGRPETR +EFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 304 QALDWKLRHKTECAPFDRWLIEDDDLEGGDDG 336
           QALDW+ +HK EC P D W+    ++  GDDG
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI--GDDG 322

[Close]

BLAST of Sed0007485 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 46.2 bits (108), Expect = 6.3e-05
Identity = 22/57 (38.60%), Postives = 30/57 (52.63%), Query Frame = 0


Query: 277 CGRPETRLNEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF---DRWLIEDDDLE 331
           CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F   D   +  DD++
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRSTDSSPVRRDDID 118

[Close]

BLAST of Sed0007485 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.8 bits (107), Expect = 8.2e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 289 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 321
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Sed0007485 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.8 bits (107), Expect = 8.2e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 289 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 321
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of Sed0007485 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439699.1	6.0e-167	83.05	PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [C...	[more]
XP_038894785.1	5.1e-166	83.33	F-box protein At1g67340 [Benincasa hispida]	[more]
XP_004154118.1	5.6e-165	82.49	F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_0...	[more]
XP_023519168.1	2.1e-164	82.20	F-box protein At5g50450-like [Cucurbita pepo subsp. pepo]	[more]
XP_022994416.1	1.4e-163	81.36	F-box protein At5g50450-like [Cucurbita maxima]	[more]

BLAST of Sed0007485 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	3.4e-112	58.94	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.1e-110	58.13	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q09415	4.0e-04	47.50	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]
Q9SJA1	8.9e-04	38.60	Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of Sed0007485 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UP50	2.9e-167	83.05	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680...	[more]
A0A1S3AZD5	2.9e-167	83.05	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1	[more]
A0A0A0LTV0	2.7e-165	82.49	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 P...	[more]
A0A6J1JZ31	6.7e-164	81.36	F-box protein At5g50450-like OS=Cucurbita maxima OX=3661 GN=LOC111490141 PE=4 SV...	[more]
A0A6J1GUJ3	6.7e-164	81.36	F-box protein At5g50450 OS=Cucurbita moschata OX=3662 GN=LOC111457247 PE=4 SV=1	[more]

BLAST of Sed0007485 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	2.4e-113	58.94	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	7.7e-112	58.13	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	6.3e-05	38.60	ubiquitin-specific protease 19	[more]
AT1G17110.1	8.2e-05	50.00	ubiquitin-specific protease 15	[more]
AT1G17110.2	8.2e-05	50.00	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 171..210 e-value: 3.9E-9 score: 36.4
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 168..210 score: 11.11871
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 5..131 e-value: 8.4E-12 score: 47.1
None	No IPR available	GENE3D	6.10.140.2220		coord: 159..213 e-value: 1.2E-11 score: 46.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..248
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 1..225
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 7..95
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 166..215
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007485.1	Sed0007485.1	mRNA
Sed0007485.2	Sed0007485.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding