Sed0007359 (gene) Chayote v1

Overview


Name	Sed0007359
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SENSITIVITY TO RED LIGHT REDUCED 1
Location	LG03: 6089445 .. 6091990 (+)
RNA-Seq Expression	Sed0007359
Synteny	Sed0007359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAAATAAGAACCCACGGCTTCTGTTATTCGCTAACCTGCAAAAGCTAGAGATGCAGACGGGCGTACATTCATGAACAAAATTACATCAAATTCGCTGCGTTGTTCATCGAGGAAAGCGAAGAATCGAGCGCCAATCAGGTTTGTTACTCAAAAATCCCTTCAATTTCTTCTGTTCATGTGTTTATGCTCACTGATTTTGATTTCATTCCACTAGATTTCGTTCTTCGTTTCTACAATTATGTCCTTTCGCGATTCAATCCGATTGAACCTGACCTAATTTTCTCTCAATCTGAGCTTATAATGTTCACGATTTCCTTGATTTCATTCTGTATTCGTTGTTTCGCTTTCTGCGATTCAATGAGTACATGAGTTCGATGTGCTGGATCTTTTGATTACTGTAGAGTTTTCATGTTTTTTTTGTACAATTCTTAATGTTATGAAAATGGAACAACAATTGAAAACTGTAAAAATGTAAGAGGAAACACACAGATTTACTTGGTTGACTATCGATGTGTTAGCTGCATCCGGGTAGAGGAGAGAACAATTTATTTTATTACTTTAGGAGACAAGAATACAAAATTTTGATTACCTGGGGTTAAGATTTGAATAGAGTTTATACAGGACACTCTCATATAATACGCCCAATTACATAAAAGTGCATACGTGTAAGTGTAAACCCAATTTCCTATTTCGTCTAGGTTCTGGGAGTATTCAACAGTTCAAGGCATATCTCAACACTTAAAAAAGTAGGAACAAGCATTGTTACCAAAATTAAACTAATTGTATATGTTGTCTCGCTTTGTACAATAGAATGAGTACAACAAGAGTTTGATGTGCTGAATTTTTCATGTTGCTTTTTGACGACTCTTAAGGTTAGGAAAGAGTTCTTGTAATTAGGACTCGACGATTATCTCTTGGAACAATGGCAGCTTCGGCAAAAACTCTTGCTATTCCGGACCAGTCGAATAAGGGCGATTGGACGGTTGTTTTACCTCGTCGTGGTAAGCATAGGAAGAATTTGCCGAAGCTTAAAAAACAAGATCAGGGGAATTGGTCTCCCACTGATCAGGTCAATGATACAATCAGAGAATCGAAACTGTTGCAGAAGATGGAATTATGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCAAACTCTTGTTGATGAGCTTGGAACTATGCCAGTCTTGGAATCCTTGGATAGGGTTTTAGCCTCGGAGTTGAAGATGGGGATGGTTAGTTATGGCGTAGGAAGCATTGAGAGCTATGAAAATCCTCGATTGCAGCTCAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGCTTAGAGGTGTTTGATCCAATTCTTTCTGCCACTGAATGTCGGGTTATCGAGTCGTTTGGTTGTTCTGTTCTGTCAGTAAATGAGCAAGGAAGGCGATGTGCGCAGAAGCCGACGATGTTCTTTATGCCCCATTGCGAGGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGACAGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTATCTGAATTCCCAAACTCACCCGTTGTTGATTCCACGAAGTACATCTTGGCCTCTAGAAAGTTCACATGCGAGATCAAAATCAAGATACTTTCAGATGATTATTTTGGTGCTTTTCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTCTACCTACAGAGCTGCAATTCACAGATCTTTGAGGGCATTGTCCAATGCTTGGAAAAACAGACAGGTAAATGGAGTGTTATAATTTAACATGGACTATTTATCATTTTTGACATGTTTGACTGACATTCCAATTCCAATATGTGATAATTTGGTTTAAGAAGAAAAAAAAGAACATATAGATGTCTAACTGTTTTAAAAGGCTCGATCAAGCTTGCGCTTGGGCGTGCCTAGACTCGAGGCATAAGTCTAACACCTTGCCTTGCTCCTTGAGCATATCAAGTAAAAAGGCGTGTGCTGACATCCTATGATAAATGGTAAAAAAAAGCAAGTTTGACTAATTCTAAATGCAAAAATCCTTGCATTAAGGGGTTATATTTTGTTCTTTATTAACTAAATAATATCATTTATTAACTCTTAGGGTATACATATATTTTTTAATATTCTCGCTCTAACTATACTATCTCTTTTTTATGAATGTTCTTACATATAGTGCACCTCACGAATAGAAAGTCCATGCTTTTTGTTGTATCTTGTACCTAAGTCTCATAGTCGACTATTATGTCTTAGTGTGCCAACTTTAAACACCTCTCAACCAACCATATAAATTGGTATGAGATTCTATGAAAAGCGACCTTGAGAGTAGAGATTTACATTACCTTATAAGGAGTTAGAGAAATGAGAACCCTTTATAGGTGTAGATCAATATCTCGCACAGGCACAACTAAGATGAACAGTGTTCACTTGATATGGTTGGTAACAATGTAGTTATTCTTGCTAAGTATATAGGAATAGCTGAATATCAACGCATATTTTATCCATTGTT

mRNA sequence

TACAAATAAGAACCCACGGCTTCTGTTATTCGCTAACCTGCAAAAGCTAGAGATGCAGACGGGCGTACATTCATGAACAAAATTACATCAAATTCGCTGCGTTGTTCATCGAGGAAAGCGAAGAATCGAGCGCCAATCAGGTTCTGGGAGTATTCAACAGTTCAAGGCATATCTCAACACTTAAAAAAGTAGGAACAAGCATTGTTACCAAAATTAAACTAATTGTATATGTTGTCTCGCTTTGTACAATAGAATGAGTACAACAAGAGTTTGATGTGCTGAATTTTTCATGTTGCTTTTTGACGACTCTTAAGGTTAGGAAAGAGTTCTTGTAATTAGGACTCGACGATTATCTCTTGGAACAATGGCAGCTTCGGCAAAAACTCTTGCTATTCCGGACCAGTCGAATAAGGGCGATTGGACGGTTGTTTTACCTCGTCGTGGTAAGCATAGGAAGAATTTGCCGAAGCTTAAAAAACAAGATCAGGGGAATTGGTCTCCCACTGATCAGGTCAATGATACAATCAGAGAATCGAAACTGTTGCAGAAGATGGAATTATGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCAAACTCTTGTTGATGAGCTTGGAACTATGCCAGTCTTGGAATCCTTGGATAGGGTTTTAGCCTCGGAGTTGAAGATGGGGATGGTTAGTTATGGCGTAGGAAGCATTGAGAGCTATGAAAATCCTCGATTGCAGCTCAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGCTTAGAGGTGTTTGATCCAATTCTTTCTGCCACTGAATGTCGGGTTATCGAGTCGTTTGGTTGTTCTGTTCTGTCAGTAAATGAGCAAGGAAGGCGATGTGCGCAGAAGCCGACGATGTTCTTTATGCCCCATTGCGAGGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGACAGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTATCTGAATTCCCAAACTCACCCGTTGTTGATTCCACGAAGTACATCTTGGCCTCTAGAAAGTTCACATGCGAGATCAAAATCAAGATACTTTCAGATGATTATTTTGGTGCTTTTCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTCTACCTACAGAGCTGCAATTCACAGATCTTTGAGGGCATTGTCCAATGCTTGGAAAAACAGACAGGTAAATGGAGTGTTATAATTTAACATGGACTATTTATCATTTTTGACATGTTTGACTGACATTCCAATTCCAATATGTGATAATTTGGTTTAAGAAGAAAAAAAAGAACATATAGATGTCTAACTGTTTTAAAAGGCTCGATCAAGCTTGCGCTTGGGCGTGCCTAGACTCGAGGCATAAGTCTAACACCTTGCCTTGCTCCTTGAGCATATCAAGTAAAAAGGCGTGTGCTGACATCCTATGATAAATGGTAAAAAAAAGCAAGTTTGACTAATTCTAAATGCAAAAATCCTTGCATTAAGGGGTTATATTTTGTTCTTTATTAACTAAATAATATCATTTATTAACTCTTAGGGTATACATATATTTTTTAATATTCTCGCTCTAACTATACTATCTCTTTTTTATGAATGTTCTTACATATAGTGCACCTCACGAATAGAAAGTCCATGCTTTTTGTTGTATCTTGTACCTAAGTCTCATAGTCGACTATTATGTCTTAGTGTGCCAACTTTAAACACCTCTCAACCAACCATATAAATTGGTATGAGATTCTATGAAAAGCGACCTTGAGAGTAGAGATTTACATTACCTTATAAGGAGTTAGAGAAATGAGAACCCTTTATAGGTGTAGATCAATATCTCGCACAGGCACAACTAAGATGAACAGTGTTCACTTGATATGGTTGGTAACAATGTAGTTATTCTTGCTAAGTATATAGGAATAGCTGAATATCAACGCATATTTTATCCATTGTT

Coding sequence (CDS)

ATGGCAGCTTCGGCAAAAACTCTTGCTATTCCGGACCAGTCGAATAAGGGCGATTGGACGGTTGTTTTACCTCGTCGTGGTAAGCATAGGAAGAATTTGCCGAAGCTTAAAAAACAAGATCAGGGGAATTGGTCTCCCACTGATCAGGTCAATGATACAATCAGAGAATCGAAACTGTTGCAGAAGATGGAATTATGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCAAACTCTTGTTGATGAGCTTGGAACTATGCCAGTCTTGGAATCCTTGGATAGGGTTTTAGCCTCGGAGTTGAAGATGGGGATGGTTAGTTATGGCGTAGGAAGCATTGAGAGCTATGAAAATCCTCGATTGCAGCTCAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGCTTAGAGGTGTTTGATCCAATTCTTTCTGCCACTGAATGTCGGGTTATCGAGTCGTTTGGTTGTTCTGTTCTGTCAGTAAATGAGCAAGGAAGGCGATGTGCGCAGAAGCCGACGATGTTCTTTATGCCCCATTGCGAGGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGACAGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTATCTGAATTCCCAAACTCACCCGTTGTTGATTCCACGAAGTACATCTTGGCCTCTAGAAAGTTCACATGCGAGATCAAAATCAAGATACTTTCAGATGATTATTTTGGTGCTTTTCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTCTACCTACAGAGCTGCAATTCACAGATCTTTGA

Protein sequence

MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLKKQDQGNWSPTDQVNDTIRESKLLQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPRLQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFTCEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL

Homology

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BLAST of Sed0007359 vs. NCBI nr
Match: KAG7032652.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 501.1 bits (1289), Expect = 6.0e-138
Identity = 250/277 (90.25%), Postives = 259/277 (93.50%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLKKQ-DQGNWSPTDQVNDTIRESKL 60
           MAASAKTLAIPDQSN GDWTVVLPRRG+ RKNLPKL+KQ DQ  WSP+DQ NDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           L KME+CIKKVE SQFY+TLV EL TMPVLESL+RVLASE KMGMV YGVGSIE+YENPR
Sbjct: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRVIESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEF NSPVVDS KYILASRKF+
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK LSD+YFGAFHDSSWHFFSP LPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277

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BLAST of Sed0007359 vs. NCBI nr
Match: KAG6601957.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 498.8 bits (1283), Expect = 3.0e-137
Identity = 249/277 (89.89%), Postives = 258/277 (93.14%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLKKQ-DQGNWSPTDQVNDTIRESKL 60
           MAASAKTLAIPDQSN GDWTVVLPRRG+ RKNLPKL+KQ DQ  WSP+DQ NDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
             KME+CIKKVE SQFY+TLV EL TMPVLESL+RVLASE KMGMV YGVGSIE+YENPR
Sbjct: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRVIESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEF NSPVVDS KYILASRKF+
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK LSD+YFGAFHDSSWHFFSP LPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277

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BLAST of Sed0007359 vs. NCBI nr
Match: XP_023553043.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023553053.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 247/277 (89.17%), Postives = 258/277 (93.14%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLKKQ-DQGNWSPTDQVNDTIRESKL 60
           M ASAKTLAIPDQSN GDWTVVLPRRG+ RKNLPKL+KQ DQ  WSP+DQ NDTIRESKL
Sbjct: 1   MTASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           L KME+CI+KVESSQFY+TLVDEL TMPVLESL+RVLASE KMGMV YGVGSIE+YENPR
Sbjct: 61  LHKMEICIEKVESSQFYRTLVDELETMPVLESLNRVLASESKMGMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIG LEVFDPILSA ECRVIESFGCS+LSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGRLEVFDPILSAIECRVIESFGCSILSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELYNNLLQENWT ELLNHVVLFGNSFEIYEQFVSEF NSPVVDS KYILASRKF+
Sbjct: 181 PHCEAELYNNLLQENWTGELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK LSD+YFGAFHDSSWHFFS VLPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGAFHDSSWHFFSTVLPTELQFTDL 277

[Close]

BLAST of Sed0007359 vs. NCBI nr
Match: KAG6579107.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 494.6 bits (1272), Expect = 5.6e-136
Identity = 244/277 (88.09%), Postives = 258/277 (93.14%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLK-KQDQGNWSPTDQVNDTIRESKL 60
           MAASAKTLA+PDQSN GDWTVVLPRRG+ RK  PKL+ ++DQ  WSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           LQKME+CIKKVESSQFY+TL+DELGT PVLESL+RVLASE KM MV YGVGSIE+YENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNRVLASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRV+ SFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMASFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEF +SPVVDS KYILASRKFT
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK LSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]

BLAST of Sed0007359 vs. NCBI nr
Match: XP_023550156.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550157.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550158.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550159.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.8 bits (1270), Expect = 9.6e-136
Identity = 243/277 (87.73%), Postives = 258/277 (93.14%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLK-KQDQGNWSPTDQVNDTIRESKL 60
           MAASAKTLA+PDQSN GDWTVVLPRRG+ RK  PKL+ ++DQ  WSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           LQKME+CIKKVESSQF++TL+DELGT PVLESL+R LASE KM MV YGVGSIE+YENPR
Sbjct: 61  LQKMEICIKKVESSQFFRTLIDELGTTPVLESLNRALASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRV+ESFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEF +SPVVDS KYILASRKFT
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK LSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

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BLAST of Sed0007359 vs. ExPASy Swiss-Prot
Match: Q8GWZ6 (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SRR1 PE=2 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-73
Identity = 140/267 (52.43%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 10  IPDQSNKGDWTVVLP---RRGKHRKNLPK-LKKQDQGNWSPTDQVNDTIRESKLLQKMEL 69
           + + S+ G+W VVLP   R+G+ RK  PK   ++++  W   D   D  R+++L QKME+
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPRLQLSLA 129
            +KK+ESS FY   +++L +  V   +  VL SE ++ MV YG+GSIESYE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSATE   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFTCEIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++YE+ VS   ++ V+ +TK I+A+++ T E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KILSDDYFGAFHDSSWHFFSPVLPTEL 272
           +  SDDYF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

[Close]

BLAST of Sed0007359 vs. ExPASy Swiss-Prot
Match: Q8K2M3 (SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4)

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20
Identity = 61/166 (36.75%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 57  SKLLQKMELCIKKVESSQFYQTLVDELGTMPVLESL-----DRVLASELKMGMVSYGVGS 116
           S  L+ +  C++K    +  Q L + LG + +  SL     + + +S   +  V YG+G+
Sbjct: 60  SSALETITECLRK--QLEQLQPLTEALGRLHLGSSLPSASQEPLASSASHVKCVCYGLGT 119

Query: 117 IESYENPRLQLSLAILLKRKFSWIGS-LEVFDPILSATECRVIESFGCSVLSVNEQGRRC 176
             S    R+QL+  +L   K     S   V+DP+ S TE  V+ S G +VLS NE+G+R 
Sbjct: 120 FASCPTARIQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRS 179

Query: 177 AQ-KPTMFFMPHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQ 216
            Q +PT+F+MPHC   LYNNLL  NW+ + L+ V++ GNSF   E+
Sbjct: 180 VQGQPTVFYMPHCGTALYNNLLWSNWSADALSRVLIIGNSFRGLEE 223

[Close]

BLAST of Sed0007359 vs. ExPASy Swiss-Prot
Match: Q9UH36 (SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17
Identity = 62/175 (35.43%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 105 VSYGVGSIESYENPRLQLSLAILLKRKFSWIGS-LEVFDPILSATECRVIESFGCSVLSV 164
           V YG+G+  +    R QL+  +LL  K     S   V+DP+ S  E  V+ + G +VLS 
Sbjct: 142 VCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVLSE 201

Query: 165 NEQGRRCAQ-KPTMFFMPHCEAELYNNLLQENWTVELLNHVVLFGNSFE-IYEQFVSEFP 224
           NE+G+R  + +PT+F+M HC   LYNNLL  NW+V+ L+ +V+ GNSF+ + E+ ++   
Sbjct: 202 NEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLLARI- 261

Query: 225 NSPVVDSTKYILASRKFTCEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
              +  +  YI    K   E++    S  Y   F+D+S H+F PV   E    D+
Sbjct: 262 ---LQKNYPYIAKILKGLEELEFPQTS-QYMDIFNDTSVHWF-PVQKLEQLSIDI 310

[Close]

BLAST of Sed0007359 vs. ExPASy Swiss-Prot
Match: Q9VEB5 (SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08
Identity = 59/203 (29.06%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 14  SNKG-DWTVVLPRRGKHRKNLPKLKKQDQGNWSPTDQVND--TIRESKLLQKME-LCIKK 73
           SN G D+ VV  ++   RK    L+++D+ + S +D + D   +   K   ++E LC + 
Sbjct: 2   SNSGEDFQVVTRKKWMARK---CLRRRDR-HKSESDYLIDCPDVNVEKFQPRLENLCTEM 61

Query: 74  VESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPRLQLSLAILLK 133
            +S  F   LV        LE + + L       +V  G+G      +   Q +  I L 
Sbjct: 62  CQSDYF---LVAMEALQQQLEGIRKPLER-----IVCLGLGPFSRTYHALHQAAFVIGLH 121

Query: 134 RKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEAELYNN 193
           R    I     FDP+   +E  +I  F   ++S +  G+  A  PT++++PHC   L +N
Sbjct: 122 RHHK-IREALYFDPVFRDSEKELIRLFDGCIMSKDCAGKHEATVPTLYYLPHCPYALMHN 181

Query: 194 LLQENWTVELLNHVVLFGNSFEI 213
           +L  NW  E L +V L  NSFE+
Sbjct: 182 ILWSNWKRETLPNVFLISNSFEM 191

[Close]

BLAST of Sed0007359 vs. ExPASy TrEMBL
Match: A0A6J1FGU7 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita moschata OX=3662 GN=LOC111445349 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.9e-136
Identity = 243/277 (87.73%), Postives = 258/277 (93.14%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLK-KQDQGNWSPTDQVNDTIRESKL 60
           MAASAKTLA+PDQSN GDWTVVLPRRG+ RK  PKL+ ++DQ  WSPTDQ ND IRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDAIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           LQKME+CIKKVESSQFY+TL+DELGT PVLESL+RVLASE KM MV YGVGSIE+YENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNRVLASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRV+ESFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELY+NLLQENWTVELLNHVVLFGNSFEIYEQFVSEF +SPVVDS KYILASRKFT
Sbjct: 181 PHCEAELYDNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK LSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]

BLAST of Sed0007359 vs. ExPASy TrEMBL
Match: A0A6J1JWJ0 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita maxima OX=3661 GN=LOC111488981 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 238/277 (85.92%), Postives = 254/277 (91.70%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLK-KQDQGNWSPTDQVNDTIRESKL 60
           MAASAK LA+ DQSN GDWTVVLPRRG+ RK  PKL+ ++DQ  WSPTDQ NDTIRESKL
Sbjct: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           LQKME+CIKKVESSQFY+TL+DELGT PVLESL++ LASE KM MV YGVGSIE+YENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRV+ESFGCS+LSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEA LYNNLLQENWTVELLNHVVLFGNSFEIY QFVSEF +SPVVDS KYILASRKFT
Sbjct: 181 PHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK LSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]

BLAST of Sed0007359 vs. ExPASy TrEMBL
Match: A0A6J1HK12 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464256 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 244/277 (88.09%), Postives = 255/277 (92.06%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLKKQ-DQGNWSPTDQVNDTIRESKL 60
           MAASAKTLAIPDQSN GDWTVVLPRRG+ RKNLPKL+KQ DQ  WSP+DQ NDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           L KME+CIKKVESSQFY+TLVDEL  MPVLESL+RVLASE KMGMV YGVGSIE+YENPR
Sbjct: 61  LHKMEICIKKVESSQFYRTLVDELEMMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIG LEVFDPILSA EC+VIESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGRLEVFDPILSAIECQVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELY+NLLQENWTVELLNHVVLFGNSFEIYEQFVSEF NSPVVDS KYILASRKF+
Sbjct: 181 PHCEAELYSNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK LSD+YFGA   SSWH FSP LPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGA---SSWHVFSPFLPTELQFTDL 274

[Close]

BLAST of Sed0007359 vs. ExPASy TrEMBL
Match: A0A5A7VEC7 (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00470 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.6e-131
Identity = 233/277 (84.12%), Postives = 255/277 (92.06%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLK-KQDQGNWSPTDQVNDTIRESKL 60
           MAASAKT+AIPDQSN GDWTVVLPRRGK RKN PKL+ ++DQ  WSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           LQKME+CIKK+ESSQFY+TLV+EL T+P LESL+RVL SE KMG+V YGVGSIE+YENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSATECR++ESFGCSVLSVNEQGRRCA+KPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELYNNLLQENW V+LLNH++LFGNSFEIYEQFVSEF NSPVVDS+ +ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK +SDDYFGAFHDSSWHFFSPV P EL+F DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

[Close]

BLAST of Sed0007359 vs. ExPASy TrEMBL
Match: A0A1S3CQQ4 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC103503243 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.6e-131
Identity = 233/277 (84.12%), Postives = 255/277 (92.06%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNKGDWTVVLPRRGKHRKNLPKLK-KQDQGNWSPTDQVNDTIRESKL 60
           MAASAKT+AIPDQSN GDWTVVLPRRGK RKN PKL+ ++DQ  WSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMELCIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPR 120
           LQKME+CIKK+ESSQFY+TLV+EL T+P LESL+RVL SE KMG+V YGVGSIE+YENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSATECR++ESFGCSVLSVNEQGRRCA+KPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFT 240
           PHCEAELYNNLLQENW V+LLNH++LFGNSFEIYEQFVSEF NSPVVDS+ +ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 241 CEIKIKILSDDYFGAFHDSSWHFFSPVLPTELQFTDL 277
            EIKIK +SDDYFGAFHDSSWHFFSPV P EL+F DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

[Close]

BLAST of Sed0007359 vs. TAIR 10
Match: AT5G59560.1 (sensitivity to red light reduced protein (SRR1) )

HSP 1 Score: 277.3 bits (708), Expect = 1.3e-74
Identity = 140/267 (52.43%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 10  IPDQSNKGDWTVVLP---RRGKHRKNLPK-LKKQDQGNWSPTDQVNDTIRESKLLQKMEL 69
           + + S+ G+W VVLP   R+G+ RK  PK   ++++  W   D   D  R+++L QKME+
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPRLQLSLA 129
            +KK+ESS FY   +++L +  V   +  VL SE ++ MV YG+GSIESYE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSATE   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFTCEIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++YE+ VS   ++ V+ +TK I+A+++ T E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KILSDDYFGAFHDSSWHFFSPVLPTEL 272
           +  SDDYF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

[Close]

BLAST of Sed0007359 vs. TAIR 10
Match: AT5G59560.2 (sensitivity to red light reduced protein (SRR1) )

HSP 1 Score: 277.3 bits (708), Expect = 1.3e-74
Identity = 140/267 (52.43%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 10  IPDQSNKGDWTVVLP---RRGKHRKNLPK-LKKQDQGNWSPTDQVNDTIRESKLLQKMEL 69
           + + S+ G+W VVLP   R+G+ RK  PK   ++++  W   D   D  R+++L QKME+
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVESSQFYQTLVDELGTMPVLESLDRVLASELKMGMVSYGVGSIESYENPRLQLSLA 129
            +KK+ESS FY   +++L +  V   +  VL SE ++ MV YG+GSIESYE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSATECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSATE   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFPNSPVVDSTKYILASRKFTCEIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++YE+ VS   ++ V+ +TK I+A+++ T E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KILSDDYFGAFHDSSWHFFSPVLPTEL 272
           +  SDDYF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

The following BLAST results are available for this feature:

BLAST of Sed0007359 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032652.1	6.0e-138	90.25	Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subs...	[more]
KAG6601957.1	3.0e-137	89.89	Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subs...	[more]
XP_023553043.1	1.1e-136	89.17	protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG6579107.1	5.6e-136	88.09	Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subs...	[more]
XP_023550156.1	9.6e-136	87.73	protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of Sed0007359 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWZ6	1.8e-73	52.43	Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q8K2M3	3.1e-20	36.75	SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4	[more]
Q9UH36	1.4e-17	35.43	SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1	[more]
Q9VEB5	1.6e-08	29.06	SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1	[more]

BLAST of Sed0007359 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGU7	7.9e-136	87.73	protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JWJ0	1.1e-132	85.92	protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1HK12	1.1e-132	88.09	protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7VEC7	7.6e-131	84.12	Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CQQ4	7.6e-131	84.12	protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC1035032...	[more]

BLAST of Sed0007359 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59560.1	1.3e-74	52.43	sensitivity to red light reduced protein (SRR1)	[more]
AT5G59560.2	1.3e-74	52.43	sensitivity to red light reduced protein (SRR1)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012942	SRR1-like domain	PFAM	PF07985	SRR1	coord: 104..156 e-value: 8.6E-11 score: 41.8
None	No IPR available	PANTHER	PTHR28626:SF3	SRR1-LIKE PROTEIN	coord: 14..264
IPR040044	SRR1-like protein	PANTHER	PTHR28626	SRR1-LIKE PROTEIN	coord: 14..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007359.1	Sed0007359.1	mRNA
Sed0007359.2	Sed0007359.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus