Sed0007317 (gene) Chayote v1

Overview
NameSed0007317
Typegene
OrganismSechium edule (Chayote v1)
DescriptionProtein cornichon homolog 1
LocationLG14: 2058080 .. 2064395 (-)
RNA-Seq ExpressionSed0007317
SyntenySed0007317
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTGGTTAAGCCTCTAGGGTTTAGATTCCGAAGAACATTAACAACCAATCGGTGCAGAAATGGCGTGGAATGTGATCTTTTGGTTTACCACTTTCTTTATCACCATCGCCCTTCTCGTCCTCAACTTTTACCAGGTACATACTCTCTAATCTCCCACAAACCCTACCTTCCCAAATCAATTACTTCTTTAATCGGTTAACTTACTGATTTCTTTTCTTTTTTTTCTTTTTTTCCTGAGAAAGTGTTGAAACGTAGCCTGAAACTTCTTGTTGTTTCATCTTTGATGTAATCCTGTGGTTACTTGCTCCAAAAGAGCGTTATGAGATTCGGATTTGTTTTTGCTAGAACAGAGCATTTGAACCTCTTTGATTTATGCCTAGATGTGACCTAGATTTTGATAATTTTTGTTTGAAATCGGGAACTCGGAGCGGCACTCCACTATGCCCATGTAACCAAGTCCGTCAAAGGAATTGAGACACGAATTGAGATACGGGAGGTGTCTGCAAATTAATGTTACGGTGGGACGCAAACTTGAGACCTTGAGAAGCACACCTTCAAAACCCAAACATTCCACATCCCTAAGGAGTGGTGCAGCGGTTGAAGACTTGAGTTTTAAAGGTGTACTCCACTGAATGTACCAGGTTCGAGACTCACCCGTGACATTGCAGACACCTTTTGTAGCTTCATTTCTTTGATGTCTCTCGGTACTTGGACTAGGGACGGGTGTGGTTACTCTTGTTTTAAAAACAAAACCCAAGTATTCGACCACCGTGCCACCCCTTGGAGACGGCTTAGATTTTGATAAATGGAACCTGTAGACTGTCACTGCACCTATTTTGAAATGTATCGAATACCTACTTCCCATTCCATCGTTTTCTTTTGATATCTCAACCAAGAAGTAGAATGATTAATTTTAAGGTGACGAGTTTGATATTTTGATCAGTCGTGCACTGTTAGTCAAAGAAAACGTATTCACAAAATGATACATATGAAATAACTTGGCATTTCCAGGGAATGATTTGATCGTTTCCGGAATCTGAGTTAATGATGTTTTTTTTTTAAAAAATTCTTTTTTAATCTTTTTTTCTGAATGAAAGTAGGTTCATTTCTTAAAGAAAAAAGATGCATTCTTACCTTGGTATGTAGCCTTCAGAGATGTGGCTGTCTATTTAACTTGTGGGGATGAAAGATAGTAAATGTATTTCAACTGTAAAACTGAGTTCTATTATTGTAATTGATATCTTGTTTTTTAGATTTTAATTACTGATTCTTGATGCGGATAGAAATACAAGTGATCCCAATGTTCCTACGAGTTATTTCTCGGGCTATTGATTGTTTGATGTGCCCCATTTTTGTTTAATACGTCATGTACAGTGGTAGGAGGAGAGAAGTGATTGTTCTTATTTTTATGGACTTGGTGAATATTTAGAGTTTTCATTTATAGCTCAATGTCATTAGCAATTGCAAAGAGTAGTAGTAATTATCTATGTACTTTTGTGTTCTCAAGTTGGAAGCATCTAACCGTTGTGGTTGTTATTTATGTAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATCAATAAACTTGTCATTCCAGAGTTCTTAGTGCAAGGAATACTTTGCTCTCTTTTCCTCTTCACAGGCCATTGGTTCATGTTTCTTATAACCGTCCCCGTTAGCTGCTATCACATAAATTTGTAAGTATTTATTGACAGTGATAAGAGGCCCGATATACTTTCTGTACCTGTGTGCTATGGATAGGCCAATTTGTGGTGCTTGATTTTTTCTTTTACCGTAGTCTCCAAGGGAAGACTCGTTAGTAGAGTCTTGGGGTCTCCAAGATATGCTCTCTTGGAGGTCTTAGGTTTAAAATCCACAAGTAAGTTTAACGGTAAAATCCCCTGTTGTCTCTTGTGTTCAGGCCTTGAGACTCACCTGTGACATTATAGATAGCTCCTTTAGTTCGAGATTCCCTCCAGAGTCGTGTGGATTTGGGTTTGAAATCCTAGTTTCCAAAAAAAAAAAAAAAATTCTAGCATACCTCTATATTGTGCTAATATTTATTTCAATGTAACCATATCATTACCGGCCCCTAAAAGCGCAACATGTCCTCAAGGTGTGCGCAAACAAATGACAAACTAAAGAAAACCTTTTTAAGTGTTAAGGTTGCCTTGCTGTTTGCGAGATAGAAGACCTGTAGGGAGATGATTAGAAATTTTTTTGTTTCTTCTTTTCATGAGAAGAGAGATTTCTTGTGGAAGATTGAGTTGCGTGCCATTTTTTTAGTTTTAGGATCGAGAGAAATAATAGAATATGTAGAAGAGTGAAGAGATCTAAATGATATTTGAGCCCTTGGATTCTATGTTTCTAATTGGACCTTAGTTACTAGATTTTTTTGTAATTACCCTCTAAGAGTAATTTTACTAGGTAGAAGCCCCTTTTTATAGGCGATCTCCCCCATTTTCTTGAGTTGGTTTTTCATATATGCGACTGTCTGGATCAGTTTATGCGCACTTCGACTATTATCATGAGATATACTGCTGGATACTACAATATTTGGATGTCAAGGAAACCCGTAGGAAATCAAATCGTAGGTAGGTAACCATCATGGATTGCACCCATCATCTCTTAGCTAGTTAAGACCCTCTTGACCACTAGGCCACTCCATGATAATTTTTTGTATGCCATTTGTGTTATTCTTTCATTTGTTTTGCCAATGAAAGGTTGATGTCTAAAGAAAATGAACTCTTATATGTTCTTTGGTGCTATGAGATGGCCTTTTAAGGCGTGGACCCTATTTTTTGAGGAGTTTGGTCTTTTGCTCGCCAGATGGACCCTATTTCCCTTCTCTTTTGTGAAAATGAGAGTTTTTGTGGTAAGCTGGAATGTGTCATTTTGTGCAGGCCTGGAGGAGAGAAAAACAATAGAATCTTTAAAGGGGTGAAGCCTCCAAACGATGTTTAAGCCCTCATTCAATTCGATATTTCTTTTTTGGGCATTTGTTACTTGGCTTTTTTTATAATTATTCTTTAGGAGTTATTTTACTTGATTTGATGCCGTTTTGTAGGTTATATCACTCTTGCGGTCTTTTTCTTTTGTTTGTCTTCTTGGTCTTGTGTTCTTTTATTCTTTTCTGAATGAAAGCTTAGTTTATTATTAAAAAAATTTATCATGCTGACCGTTATTGCTTTCTTCATTCTTTCTGAACATTCTTATCCATGTAGTTATTCGACGCCTGACCTAGGAACGGGCATAGTTATCCTTATTTCAGAAAAATTTAATTCCATTACATGGAACCTTCGTCAACCGAAGTATGCCAAACTTATTGTTAGAACCTTATATCCACAAATAAGCCTAATAGATTTTTGGTGATGAAAACTAAAACTTTGTAACTAAGTTGGTTAACAAGAAAAAAGATATAAAGAAAAAATAAAATAAGAAAATAAAATTCTATTCCACTAGTTAGACTGAGAGTTGCTTCCTCTTAATATTTTCAAGGTACTGTGTTGTTGATATTCTCAAGATGAGTACGATGAGGATGTGAAAGCTATTTATGTACCATAGTTTTCATGAAACTTTACATTTAACCATACAAACTAATAAACTAATGGAGAAACAACACTTCTAACAATATACTTGAACAAACAGTTACTTATAATATTTCCCCTCAAACTAAGGGTGCGTCGAGCTTTAGTTTGCTGTGAAGAAGAAGAAAGTGAGTTTGACTAAGCCATTTGATGAAGAAGTCTCCAAGTTGGTCAACACTTTAGATGAAAGTGATATGGATATCTTTCTGAATAGTTTTCTCCCGTACAAAGTAGTAGTAATTTCTATGTGCTTCGTACGACTTACGAGCATGGAACAAAGGGCTGTTTGCAAGTGAGATTGTTGACACAATACACTTTATCTACATATAAAAAGGTAGAGCCCTTTGATGTATGTCTTAAGAAGAGAGAGGGATCAAATTGGGAGGCAATTAAATCAAAGGTCAACAAACGAGTTTTAAAGCATTCAAACCACGCACGCCACTTGCTTTAGACCATATAAGGACTATTTCAATCGGTAAATCAAATTGGGACTTTTTGGTGATCGATAGCCATCTACTGCTGTTCTTTTTAAGAGCAAAACTAAAACTTTGAAATGTTAAGTTGGTTAACAGGAAAAAGATGAAAACAAAAAAGAAAAATGTAAAAGAAGTTCTATTCCAGTAGTTAGATTGAGAGTTGCTTCCAAGTATTTTCTTCATGTTTGTGTGCTTATAACGTTTTATCCTGTTACAATGCCCCAGGTACTTAAAGAGGGAGCACCTTATTGATGTTACTGAGGTGTTTCGAGCTCTAAGACGCGAGAAGTATTTTCGTTTTGGCAAGCTTATCTTCTACATGTCTCTGTTCCTCATAGTAATCTTCAGGTTAGTCTGCATTTTTTACTGCCTCATTTTTCAGGTTGGATATTTCTAATTGTATTACTGTTTTCTGTATAGAATAATAATGGTTGCGGGAATGAAATCTGTTTTTGACACTGCACCTGAGGATTAGACATTGATTTGGTCCACTGTTTTCGAGTTCTAGAGTATTTATTTAAACATCTAGCTTGAAGTTGATGTAGCAATTTAATCTCAAACCACAAATATGCCTGATAAGAAATCAATAATAAAAGATAAACATAATCAAGTAAATAGAGAAGGAGGAGACAAGATATATAGTGGTTCAGGAATATCCCTAATCCACTATCGAATCCAAGAGTCAATTTCCAATACTCACATAAATAAATTGGAGGAGAAGAAAGAACAATTCCCAAACCCTAAACCTCACCAAATACTCTACATCTCTAATGTCTCTCTCAAAGAACCCATAAGGATGCTTAAATAGGATGTTACAATTTGGGTTACAAAAAACCCTAACTCACAAGGCCCAAATGGGAATACAAAATTACCCCAAGGTAACAATATTTAACCTATGATAAAAATGTTAAATATATACAATTCCCTAATACAAATATGTGAGTCACAAACCAACAGTTCAATCCATTCTCTGTTTTGAAATACATCTATGATTACAAGAAAATAGTCTACTTTATTCATTTGCAAAGTTCTTAAAGATAATGTTGTTGCTCTAGTTTTGAGTTGAATCCCTTACCTCTCTTTTGTCTTGATGCCAATATTTTGTTAATAATACATCTATTAAATTATGTTAAATCACCAATCAACCCAAAAGTTAAAGCTAGTGGGTTGTGGTACTACAACATCATTCCTAGATTTTGGACTCTATTTTGTTTGAAACCAATCATTCTTCTTTCTAGCCTTTTTTTGGTCTCAATCGTTGATGATCCCACATTGGAAAGTGAGACCTCAACCTTTATAAAAAATGCGAGTTACTTCTTCATTGTAAATGAGTTTTGAGACGAAACCTCATGCTAATGTAATATGGTTCAAAGCCTATTACATGCATATAGTTATTCAGTTAAATAATAATGAAATTAATCTGATCCAAGATTGGTGAATTCAAAGAAGCACCATCTTGAGAAGACAAGTCGAGGATCCTACATTGGAAAAGTGAGGAGGCCTCAAAACCCAAATGGTAAGCTACCACACTTATTGCATTGCCAATTGATTTTGAGACACAATCCCACGCCAATCTAATACCAAATTAGCTTAGAATGTTCAATAAACTTCTCGATTTTAAAGTTGTAGATTTGTTTAGTTTTAGGGTTGACTCCTATGCTTCTTGACATACTGGTACTTGTGTATTTGCATCCACATAATTTTCTTCATCATGTATCGAGTATTCATTTTCGTCTAATTAAGTGCAAACATGCAATGCAGGCTTACTTTGTCCGCTTTCAACGCTTTATCAGAAGAAGACGACCTCGTACATTTATTTTGATCGATTGTGATTCCCTTATCCAGAGTTTATATTACGAGTTCTATAGCGTGTATGGTTGATGTTTGTATGGGAATTTACATGAAGCAAATGAATTTGGACTCAGCAACTTCTAACACATTCATACAGGTTTTCCTCCTATTAGGCTTCAGTAGCAATCTTGTTGTCTTTGAGCCGAGGAATACATGTATGTAGCATCTGTTTTCCAGTTTAAAACAGTTAACGATGTGATTGTAGAACGAGTTTTCTTAGCATTGTAGTAGGTGCATTTTTTTTTTAGTTTGACCGTAGGGTGGAATATCGAACTTATGACCTCTTGGTTTATAGGTGTACATTAATGTCGTTAACTATCGAAGTTTTTGACCATTGCTTAATTAGTTGACATATGTGATATTATTTGCAT

mRNA sequence

GGTTGGTTAAGCCTCTAGGGTTTAGATTCCGAAGAACATTAACAACCAATCGGTGCAGAAATGGCGTGGAATGTGATCTTTTGGTTTACCACTTTCTTTATCACCATCGCCCTTCTCGTCCTCAACTTTTACCAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATCAATAAACTTGTCATTCCAGAGTTCTTAGTGCAAGGAATACTTTGCTCTCTTTTCCTCTTCACAGGCCATTGGTTCATGTTTCTTATAACCGTCCCCGTTAGCTGCTATCACATAAATTTGTACTTAAAGAGGGAGCACCTTATTGATGTTACTGAGGTGTTTCGAGCTCTAAGACGCGAGAAGTATTTTCGTTTTGGCAAGCTTATCTTCTACATGTCTCTGTTCCTCATAGTAATCTTCAGGCTTACTTTGTCCGCTTTCAACGCTTTATCAGAAGAAGACGACCTCGTACATTTATTTTGATCGATTGTGATTCCCTTATCCAGAGTTTATATTACGAGTTCTATAGCGTGTATGGTTGATGTTTGTATGGGAATTTACATGAAGCAAATGAATTTGGACTCAGCAACTTCTAACACATTCATACAGGTTTTCCTCCTATTAGGCTTCAGTAGCAATCTTGTTGTCTTTGAGCCGAGGAATACATGTATGTAGCATCTGTTTTCCAGTTTAAAACAGTTAACGATGTGATTGTAGAACGAGTTTTCTTAGCATTGTAGTAGGTGCATTTTTTTTTTAGTTTGACCGTAGGGTGGAATATCGAACTTATGACCTCTTGGTTTATAGGTGTACATTAATGTCGTTAACTATCGAAGTTTTTGACCATTGCTTAATTAGTTGACATATGTGATATTATTTGCAT

Coding sequence (CDS)

ATGGCGTGGAATGTGATCTTTTGGTTTACCACTTTCTTTATCACCATCGCCCTTCTCGTCCTCAACTTTTACCAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATCAATAAACTTGTCATTCCAGAGTTCTTAGTGCAAGGAATACTTTGCTCTCTTTTCCTCTTCACAGGCCATTGGTTCATGTTTCTTATAACCGTCCCCGTTAGCTGCTATCACATAAATTTGTACTTAAAGAGGGAGCACCTTATTGATGTTACTGAGGTGTTTCGAGCTCTAAGACGCGAGAAGTATTTTCGTTTTGGCAAGCTTATCTTCTACATGTCTCTGTTCCTCATAGTAATCTTCAGGCTTACTTTGTCCGCTTTCAACGCTTTATCAGAAGAAGACGACCTCGTACATTTATTTTGA

Protein sequence

MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSLFLIVIFRLTLSAFNALSEEDDLVHLF
Homology
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BLAST of Sed0007317 vs. NCBI nr
Match: XP_022925062.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >XP_022966479.1 protein cornichon homolog 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 252.3 bits (643), Expect = 2.6e-63
Identity = 126/146 (86.30%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAW++IFWF +F I IALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+ 
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPVSCYHINL+LKREHLIDVTEVF+ L+REKYFRF KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FL+VIFRLTLSAFNALS+EDD++HLF
Sbjct: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 146

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BLAST of Sed0007317 vs. NCBI nr
Match: XP_004144657.1 (protein cornichon homolog 1 isoform X2 [Cucumis sativus] >KGN55348.2 hypothetical protein Csa_012541 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 5.7e-63
Identity = 126/146 (86.30%), Postives = 138/146 (94.52%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAWN+IFWF +F   IALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQG+ 
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPV+CYHINL+LKREHLIDVTEVFRAL+REKYFR  KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FL+VIFRLTLSAFN+LS+EDD++HLF
Sbjct: 121 FLVVIFRLTLSAFNSLSDEDDVLHLF 146

[Close]
BLAST of Sed0007317 vs. NCBI nr
Match: XP_022967917.1 (protein cornichon homolog 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 251.1 bits (640), Expect = 5.7e-63
Identity = 125/146 (85.62%), Postives = 138/146 (94.52%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAWN+IFWF +F I +ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQG+ 
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPVSCYHINL+LK+EHLIDVTEVFR L+REKYFR  KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FL+VIFRLTLSAFN+LS+EDD++HLF
Sbjct: 121 FLVVIFRLTLSAFNSLSDEDDILHLF 146

[Close]
BLAST of Sed0007317 vs. NCBI nr
Match: XP_038883916.1 (protein cornichon homolog 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 250.8 bits (639), Expect = 7.5e-63
Identity = 127/146 (86.99%), Postives = 138/146 (94.52%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAW++IFWF +F   IALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQG+ 
Sbjct: 1   MAWSLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPVSCYHINL+LKREHLIDVTEVFRAL+REKYFR  KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FLIVIFRLTLSAFN+LS+EDD++HLF
Sbjct: 121 FLIVIFRLTLSAFNSLSDEDDVLHLF 146

[Close]
BLAST of Sed0007317 vs. NCBI nr
Match: XP_023518963.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.8 bits (639), Expect = 7.5e-63
Identity = 125/146 (85.62%), Postives = 138/146 (94.52%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAW++IFWF +F   IALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+ 
Sbjct: 1   MAWSLIFWFVSFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPVSCYHINL+LKREHLIDVTEVF+ L+REKYFRF KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FL+VIFRLTLSAFNALS+EDD++HLF
Sbjct: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 146

[Close]
BLAST of Sed0007317 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.9e-41
Identity = 84/146 (57.53%), Postives = 114/146 (78.08%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAW++  W  +FF+++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEF++QG L
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           C LFL T HW  FL+ VPV+ YH  LY +R +LIDVTEVFR +  EK  R+ KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           F++V+FRLTLSA  + +E+DDL+HLF
Sbjct: 121 FIMVVFRLTLSAVYSFTEDDDLLHLF 146

[Close]
BLAST of Sed0007317 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26
Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = 0 

Query: 8   WFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSLFLFT 67
           W  +FF  IAL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF+VQG+LC  +L T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSLFLIVIFR 127
           GHWFM L+ +P   Y+ +LY KR+HL+DVTE+F  L  EK  R  KL + +    + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 LTLSAFN 135
           +  SA +
Sbjct: 127 MIYSALD 133

[Close]
BLAST of Sed0007317 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.1e-24
Identity = 62/127 (48.82%), Postives = 82/127 (64.57%), Query Frame = 0 

Query: 8   WFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSLFLFT 67
           W  +F I I LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG LC  +L T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSLFLIVIFR 127
           GHWFM L+ VP   Y+ +LY +++HLIDVTE+F  L  EK  R  KL + +    + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 LTLSAFN 135
           L  S  +
Sbjct: 127 LIYSTLD 133

[Close]
BLAST of Sed0007317 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 3.5e-23
Identity = 56/116 (48.28%), Postives = 77/116 (66.38%), Query Frame = 0 

Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSLFLFTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF+VQG+LC  +L TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSLFLIVIFRLTLSAFN 135
              Y+ +LY KR+HL+DVTE+F  L  EK  R  KL + +    + IF +  SA +
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALD 125

[Close]
BLAST of Sed0007317 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-20
Identity = 50/111 (45.05%), Postives = 76/111 (68.47%), Query Frame = 0 

Query: 4   NVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSL 63
           +++ W  +F     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QG+LC  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKL 115
           ++ TGHWFM ++++P   Y+I LY+KREHL DVTE++   + E+  R  K+
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKI 113

[Close]
BLAST of Sed0007317 vs. ExPASy TrEMBL
Match: A0A6J1HTX3 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466123 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 126/146 (86.30%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAW++IFWF +F I IALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+ 
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPVSCYHINL+LKREHLIDVTEVF+ L+REKYFRF KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FL+VIFRLTLSAFNALS+EDD++HLF
Sbjct: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 146

[Close]
BLAST of Sed0007317 vs. ExPASy TrEMBL
Match: A0A6J1EAS8 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432423 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 126/146 (86.30%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAW++IFWF +F I IALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+ 
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPVSCYHINL+LKREHLIDVTEVF+ L+REKYFRF KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FL+VIFRLTLSAFNALS+EDD++HLF
Sbjct: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 146

[Close]
BLAST of Sed0007317 vs. ExPASy TrEMBL
Match: A0A6J1HS45 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467288 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63
Identity = 125/146 (85.62%), Postives = 138/146 (94.52%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAWN+IFWF +F I +ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQG+ 
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPVSCYHINL+LK+EHLIDVTEVFR L+REKYFR  KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FL+VIFRLTLSAFN+LS+EDD++HLF
Sbjct: 121 FLVVIFRLTLSAFNSLSDEDDILHLF 146

[Close]
BLAST of Sed0007317 vs. ExPASy TrEMBL
Match: A0A6J1EKZ6 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435524 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.0e-63
Identity = 124/146 (84.93%), Postives = 138/146 (94.52%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAWN+IFWF +F I +ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQG+ 
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPVSCYHINL+LK+EHLIDVTEVFR L+REKYFR  KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FL+VIFRLTLSAFN+LS+EDD++HLF
Sbjct: 121 FLVVIFRLTLSAFNSLSDEDDVLHLF 146

[Close]
BLAST of Sed0007317 vs. ExPASy TrEMBL
Match: A0A1S3B4V0 (protein cornichon homolog 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486176 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 125/146 (85.62%), Postives = 138/146 (94.52%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAWN+IFWF +F   IALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+ 
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVLPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           CSLFLFTGHWFMFLITVPV+CYHINL+LKREHLIDVTEVFRAL+REKYFR  KLIFY+ L
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           FLIVIFRLTLSAFN+LS+ED+++HLF
Sbjct: 121 FLIVIFRLTLSAFNSLSDEDNVLHLF 146

[Close]
BLAST of Sed0007317 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 168.7 bits (426), Expect = 3.5e-42
Identity = 84/146 (57.53%), Postives = 114/146 (78.08%), Query Frame = 0 

Query: 1   MAWNVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGIL 60
           MAW++  W  +FF+++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEF++QG L
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSL 120
           C LFL T HW  FL+ VPV+ YH  LY +R +LIDVTEVFR +  EK  R+ KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLIVIFRLTLSAFNALSEEDDLVHLF 147
           F++V+FRLTLSA  + +E+DDL+HLF
Sbjct: 121 FIMVVFRLTLSAVYSFTEDDDLLHLF 146

[Close]
BLAST of Sed0007317 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = 0 

Query: 8   WFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSLFLFT 67
           W  +FF  IAL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF+VQG+LC  +L T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSLFLIVIFR 127
           GHWFM L+ +P   Y+ +LY KR+HL+DVTE+F  L  EK  R  KL + +    + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 LTLSAFN 135
           +  SA +
Sbjct: 127 MIYSALD 133

[Close]
BLAST of Sed0007317 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 111.7 bits (278), Expect = 5.0e-25
Identity = 62/127 (48.82%), Postives = 82/127 (64.57%), Query Frame = 0 

Query: 8   WFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSLFLFT 67
           W  +F I I LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG LC  +L T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSLFLIVIFR 127
           GHWFM L+ VP   Y+ +LY +++HLIDVTE+F  L  EK  R  KL + +    + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 LTLSAFN 135
           L  S  +
Sbjct: 127 LIYSTLD 133

[Close]
BLAST of Sed0007317 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 109.4 bits (272), Expect = 2.5e-24
Identity = 56/116 (48.28%), Postives = 77/116 (66.38%), Query Frame = 0 

Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSLFLFTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF+VQG+LC  +L TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKLIFYMSLFLIVIFRLTLSAFN 135
              Y+ +LY KR+HL+DVTE+F  L  EK  R  KL + +    + IF +  SA +
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALD 125

[Close]
BLAST of Sed0007317 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 50/111 (45.05%), Postives = 76/111 (68.47%), Query Frame = 0 

Query: 4   NVIFWFTTFFITIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGILCSL 63
           +++ W  +F     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QG+LC  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLFTGHWFMFLITVPVSCYHINLYLKREHLIDVTEVFRALRREKYFRFGKL 115
           ++ TGHWFM ++++P   Y+I LY+KREHL DVTE++   + E+  R  K+
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKI 113

The following BLAST results are available for this feature:
BLAST of Sed0007317 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022925062.12.6e-6386.30protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >XP_022966479.1... [more]
XP_004144657.15.7e-6386.30protein cornichon homolog 1 isoform X2 [Cucumis sativus] >KGN55348.2 hypothetica... [more]
XP_022967917.15.7e-6385.62protein cornichon homolog 1-like isoform X2 [Cucurbita maxima][more]
XP_038883916.17.5e-6386.99protein cornichon homolog 1 isoform X2 [Benincasa hispida][more]
XP_023518963.17.5e-6385.62protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of Sed0007317 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C7D74.9e-4157.53Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV... [more]
Q84W041.5e-2649.61Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV... [more]
Q8GWT57.1e-2448.82Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV... [more]
Q3EDD73.5e-2348.28Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234... [more]
Q9SZ742.1e-2045.05Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV... [more]
BLAST of Sed0007317 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HTX31.2e-6386.30protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1EAS81.2e-6386.30protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1HS452.8e-6385.62protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1EKZ68.0e-6384.93protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A1S3B4V01.4e-6285.62protein cornichon homolog 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486176 P... [more]
BLAST of Sed0007317 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G12180.13.5e-4257.53Cornichon family protein [more]
AT1G12390.11.1e-2749.61Cornichon family protein [more]
AT1G62880.15.0e-2548.82Cornichon family protein [more]
AT1G12340.12.5e-2448.28Cornichon family protein [more]
AT4G12090.11.5e-2145.05Cornichon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003377CornichonSMARTSM01398Cornichon_2coord: 5..126
e-value: 6.9E-51
score: 185.1
IPR003377CornichonPFAMPF03311Cornichoncoord: 6..126
e-value: 5.5E-38
score: 130.0
NoneNo IPR availablePANTHERPTHR12290:SF11PROTEIN CORNICHONcoord: 1..129
NoneNo IPR availablePANTHERPTHR12290CORNICHON-RELATEDcoord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0007317.1Sed0007317.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016021 integral component of membrane