Sed0007316 (gene) Chayote v1

Overview
NameSed0007316
Typegene
OrganismSechium edule (Chayote v1)
DescriptionDUF1985 domain-containing protein
LocationLG06: 9384466 .. 9387307 (+)
RNA-Seq ExpressionSed0007316
SyntenySed0007316
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAGTTGTGGTTCAACCTAGAAGGTAGAGTTGTTAAGTTTGGTATAAGTGAATTTGAAAAAATAATTGGTCTTAACTATTGTGAAGAGGTAGAGGTGGACGATAGTAAGTTGAAGGGGAGGTTCATGAAGAAGTATTTCCCAAATAATAAATCAATTACTAGGGTGGAAATAGCCAAACTCTTCAAGAAAGGAACCAATGTTCACGAAAACCATATGGTACGCTTAGCAAAACTGTATTGTATGGAGTGCTTTATTGATGCTAAGAACTTCAAACAGAATGTAGACAATGTAAGATTGTTACTTTTTGAGGATGCAGAGCAGTTCAAGAAACATAACTGGGTAGAAGTGCATTTGAGATGACCTTGAAATATATTAAATGTGCAATCCAACACCCAACATCATCAACAATTGGTATCGGTGGATTCCCGTATGCACTACTTATTTGGGCATTCAAATGTATACCTCTAATATCACATGAGTATAATCTGTTTGCACGGCGGAAGGGATTCAATAATCCAATCATGTTGAACTAGGAAAGTGATGAGCAGCCGAAGTGGAAGGATTTGCAGGAAAAAGTTTTCGAACATCCAGAGGTAAATTTACTACACCTTTATGTAAAATATTATTTTATTGAATGATCAATACTAATTATACTGTTATCTGGTACTGTTTGCATGAAGTTCGTGTTTGTTGATATGGATTGAGGTATAGTCGGGGACAAGAAAGGGAATCATAGTTTGTCTGAAAAAACAGTAAGTATTTAATGTTATTAAACTGTATAATGTTGACTAAACATCATTAATGTACTGTATTGTCAATTTGTAATTTTTGTCTTCTTGGTAGTGTAAAGAAGATGGTGGAAATATAAGTGGTATCGAAAAATGGTTTTAGGAAGAGGTGGATGAGGCATATAATGAAATAATAAAAGGGCAACCAATGTTCCAGGCTGGTGGGAGTTCAAAGGGTAATGATTTGGAACACAATAGTGGAGTACCTAATATTGTTGAAGTGGTAAGAAGGAACTTTGAGAAAGATGATGGAAATAACAACGTACAGAACGAGGATGCTGAGAATAATGTTTACAATAATGTAGTCGAACTAACCCAATACATGAAGAAGTCATTGGATAGTTTAAATAAATGGTTAGATGAAATGTGGACGGTATTGAACGACATTTCTAATGATGTAAAGGAGCTTAAAGGATTGAATAATAATGTTGTTGAAAGGGTGGATGATGAAAAGGGTAATGACAATGATGGTGATAGTAGAGATAATTTGGATGACAATAAAGGGAATGAAGTTGGAGAACAGAGCAATCCCGGTGGTGAAGATAAAACCAAGGAAAGAGAAACAATGGAAGGTAGCGAAGATAATACAACGAAAGAGGTACAAATCTGATTGATTTACTATGTAGTTATAAATATACACATTATTTGATTATGGTGTTATTGATTTTAGGTGCAAGTGGACGTGGTTTTAATTCCTAGCTTAACTGCACTAAGACCGGATAGATATATGGATGCGGTAGTATACTGTATTTTGTTTAACAAACATTTGTAAACATCCTTGTTACATTGTGAATATTTAGCCTGGAACTGTTGTAATCTGTGTTGGAATTGAAGGGACAAGGGTTTTTCTCAGATTCACAGCATGCTAAGAGGGCAAAGCGAAAGAAAAAGCCATCAAAATACATGCTCTCTCCTTTCACTTCTAAGTTTCGGTCGTCCGAGGAAAAAAAGGAGAAAAAAGTAGATGGCAAGGAAAATATCCAATTCTCTGATCCACCAAATTTCCAATTACTTTCATAGCCTTAAGATTTTGTTGAATGTTTAGCTGTTTAGATGTTGACTTTGGATAACTTGTCTTTGAAATGTTTTTTTTATATGTTGAACTTTGATATTTTCTACTTCTGAACTCTGGTATTTATTTTGAAAGGAATGCAGTTTCACTTAAACAGGAAAGCAAGGATGTTTTATTACCATTATAAAATGTTCAACATATTCCATACATATAAACTGTTTTGTGTATGCCATACAGTTTAGTAAACATACGACAGTTCTGTATGTTCAACATTATTAAATCTACGGTGCATATATTACCTGATTATATGGTTTAGTCAGGAAAGCATGGATTTATATTTACATTATGTTTACAAAAGGACGAATCTCTCTATTAGATTGAAGATTAGTAAAGAAAACAATAGTTAACTATATGGTTTATACTAGGGTTAGAAAATCAACTTAGTCTGAAGTACAATATTGTCAACTATATGGTTTTTATCTAATTATATGGTATGGTACTACCTATTTTTCTGACCAATATGATTGCAACATGGTATAGGTATTTACAAAGGTTAGAAAATCAAATTGTTTGCGGTATTTGAATGTATAATCTTTCCAACTATACTGTATAATATGAATGTTTTGTAATAAAAATGAAAATTTATGAAGCAATGTTGAAACATAAAAATAACAATACTAGTATGAAAATCCAGGAGATAAGAACAAGAATAATTGTCTTCTTGATAATAAAAAAGAAAAATGAAAAGTTTTTTGGAGATAAAAATAAGATAGAAATGTAAATCCATCATTGGGTGAATGCGTTCCGACATGTTTTCTTATTGTGTCCTTGTTGTCCACATCGAATGCATTTGATTCGTTGTTTTACCTCTAAAGATGATTTGAAACGTTTCTTCTTTGGTCTGCCTATTGGTTGTTTGGTTTTTGAAGGAAGGAGTTTTTTAGATCGGATGTCGTCTGGAACAACCCAATGTTCCTTTGGTCCTAGGGGGTAAACAATACCTGCATACATTTTTCTTAATGTTTCAGCAAGATAG

mRNA sequence

ATGGATGAGTTGTGGTTCAACCTAGAAGGTAGAGTTGTTAAGTTTGGTATAAGTGAATTTGAAAAAATAATTGGTCTTAACTATTGTGAAGAGGTAGAGGTGGACGATAGTAAGTTGAAGGGGAGGTTCATGAAGAAGTATTTCCCAAATAATAAATCAATTACTAGGGTGGAAATAGCCAAACTCTTCAAGAAAGGAACCAATGTTCACGAAAACCATATGGTACGCTTAGCAAAACTGTATTGTATGGAGTGCTTTATTGATGCTAAGAACTTCAAACAGAATGTAGACAATGAAAGTGATGAGCAGCCGAAGTGGAAGGATTTGCAGGAAAAAGTTTTCGAACATCCAGAGGAAGAGGTGGATGAGGCATATAATGAAATAATAAAAGGGCAACCAATGTTCCAGGCTGGTGGGAGTTCAAAGGGTAATGATTTGGAACACAATAGTGGAGTACCTAATATTGTTGAAGTGGTAAGAAGGAACTTTGAGAAAGATGATGGAAATAACAACGTACAGAACGAGGATGCTGAGAATAATGTTTACAATAATGTAGTCGAACTAACCCAATACATGAAGAAGTCATTGGATAGTTTAAATAAATGGTTAGATGAAATGTGGACGGTATTGAACGACATTTCTAATGATGTAAAGGAGCTTAAAGGATTGAATAATAATGTTGTTGAAAGGGTGGATGATGAAAAGGCAAGATAG

Coding sequence (CDS)

ATGGATGAGTTGTGGTTCAACCTAGAAGGTAGAGTTGTTAAGTTTGGTATAAGTGAATTTGAAAAAATAATTGGTCTTAACTATTGTGAAGAGGTAGAGGTGGACGATAGTAAGTTGAAGGGGAGGTTCATGAAGAAGTATTTCCCAAATAATAAATCAATTACTAGGGTGGAAATAGCCAAACTCTTCAAGAAAGGAACCAATGTTCACGAAAACCATATGGTACGCTTAGCAAAACTGTATTGTATGGAGTGCTTTATTGATGCTAAGAACTTCAAACAGAATGTAGACAATGAAAGTGATGAGCAGCCGAAGTGGAAGGATTTGCAGGAAAAAGTTTTCGAACATCCAGAGGAAGAGGTGGATGAGGCATATAATGAAATAATAAAAGGGCAACCAATGTTCCAGGCTGGTGGGAGTTCAAAGGGTAATGATTTGGAACACAATAGTGGAGTACCTAATATTGTTGAAGTGGTAAGAAGGAACTTTGAGAAAGATGATGGAAATAACAACGTACAGAACGAGGATGCTGAGAATAATGTTTACAATAATGTAGTCGAACTAACCCAATACATGAAGAAGTCATTGGATAGTTTAAATAAATGGTTAGATGAAATGTGGACGGTATTGAACGACATTTCTAATGATGTAAAGGAGCTTAAAGGATTGAATAATAATGTTGTTGAAAGGGTGGATGATGAAAAGGCAAGATAG

Protein sequence

MDELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKLKGRFMKKYFPNNKSITRVEIAKLFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNESDEQPKWKDLQEKVFEHPEEEVDEAYNEIIKGQPMFQAGGSSKGNDLEHNSGVPNIVEVVRRNFEKDDGNNNVQNEDAENNVYNNVVELTQYMKKSLDSLNKWLDEMWTVLNDISNDVKELKGLNNNVVERVDDEKAR
Homology
[Close]
BLAST of Sed0007316 vs. NCBI nr
Match: KAA0060374.1 (uncharacterized protein E6C27_scaffold22G001730 [Cucumis melo var. makuwa] >TYK22114.1 uncharacterized protein E5676_scaffold318G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-14
Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 0 

Query: 2   DELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKLKGRFMKKYFPNNKSITRVEIAK 61
           DELWFN EG + KFGI +FE I GLN      VD+SK+KG+F+ KYF N   I+R  ++ 
Sbjct: 51  DELWFNFEGTIAKFGIRKFEAITGLNCVPLPIVDNSKVKGKFLSKYFKNEDPISRSRVSF 110

Query: 62  LFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           LF +   + E   +++AK+Y +E F+  K F    D E
Sbjct: 111 LFNESKKLKEEDKIKMAKIYFLENFLLGKQFTTGCDFE 148

[Close]
BLAST of Sed0007316 vs. NCBI nr
Match: XP_038883715.1 (uncharacterized protein LOC120074618 isoform X1 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-13
Identity = 43/99 (43.43%), Postives = 64/99 (64.65%), Query Frame = 0 

Query: 2   DELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKL-KGRFMKKYFPNNKSITRVEIA 61
           +ELWFNLEGR+ KFG+ EF  I GLN  E  E+D SK+ KG+F K+YF   K+I R ++ 
Sbjct: 640 NELWFNLEGRIHKFGMKEFSLITGLNCGELPEIDMSKIQKGKFNKRYFGGEKTIKRTKLH 699

Query: 62  KLFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           ++F +        +V++AKLY +E FI  K  +  +++E
Sbjct: 700 EVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHE 738

[Close]
BLAST of Sed0007316 vs. NCBI nr
Match: XP_038883719.1 (uncharacterized protein LOC120074618 isoform X5 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-13
Identity = 43/99 (43.43%), Postives = 64/99 (64.65%), Query Frame = 0 

Query: 2   DELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKL-KGRFMKKYFPNNKSITRVEIA 61
           +ELWFNLEGR+ KFG+ EF  I GLN  E  E+D SK+ KG+F K+YF   K+I R ++ 
Sbjct: 634 NELWFNLEGRIHKFGMKEFSLITGLNCGELPEIDMSKIQKGKFNKRYFGGEKTIKRTKLH 693

Query: 62  KLFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           ++F +        +V++AKLY +E FI  K  +  +++E
Sbjct: 694 EVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHE 732

[Close]
BLAST of Sed0007316 vs. NCBI nr
Match: XP_038883717.1 (uncharacterized protein LOC120074618 isoform X3 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-13
Identity = 43/99 (43.43%), Postives = 64/99 (64.65%), Query Frame = 0 

Query: 2   DELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKL-KGRFMKKYFPNNKSITRVEIA 61
           +ELWFNLEGR+ KFG+ EF  I GLN  E  E+D SK+ KG+F K+YF   K+I R ++ 
Sbjct: 638 NELWFNLEGRIHKFGMKEFSLITGLNCGELPEIDMSKIQKGKFNKRYFGGEKTIKRTKLH 697

Query: 62  KLFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           ++F +        +V++AKLY +E FI  K  +  +++E
Sbjct: 698 EVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHE 736

[Close]
BLAST of Sed0007316 vs. NCBI nr
Match: XP_038883718.1 (uncharacterized protein LOC120074618 isoform X4 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-13
Identity = 43/99 (43.43%), Postives = 64/99 (64.65%), Query Frame = 0 

Query: 2   DELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKL-KGRFMKKYFPNNKSITRVEIA 61
           +ELWFNLEGR+ KFG+ EF  I GLN  E  E+D SK+ KG+F K+YF   K+I R ++ 
Sbjct: 635 NELWFNLEGRIHKFGMKEFSLITGLNCGELPEIDMSKIQKGKFNKRYFGGEKTIKRTKLH 694

Query: 62  KLFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           ++F +        +V++AKLY +E FI  K  +  +++E
Sbjct: 695 EVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHE 733

[Close]
BLAST of Sed0007316 vs. ExPASy TrEMBL
Match: A0A5A7UZA2 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001110 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 0 

Query: 2   DELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKLKGRFMKKYFPNNKSITRVEIAK 61
           DELWFN EG + KFGI +FE I GLN      VD+SK+KG+F+ KYF N   I+R  ++ 
Sbjct: 51  DELWFNFEGTIAKFGIRKFEAITGLNCVPLPIVDNSKVKGKFLSKYFKNEDPISRSRVSF 110

Query: 62  LFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           LF +   + E   +++AK+Y +E F+  K F    D E
Sbjct: 111 LFNESKKLKEEDKIKMAKIYFLENFLLGKQFTTGCDFE 148

[Close]
BLAST of Sed0007316 vs. ExPASy TrEMBL
Match: A0A0A0KI50 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-12
Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 0 

Query: 2   DELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKL-KGRFMKKYFPNNKSITRVEIA 61
           +ELWFNLEGR+ KFG+ +F  I GLN  E   +D SK+ KG+F K+YF   K+I R ++ 
Sbjct: 647 NELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRAKLH 706

Query: 62  KLFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           K+F +        +V++AKLY +E FI  K  +  +++E
Sbjct: 707 KVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHE 745

[Close]
BLAST of Sed0007316 vs. ExPASy TrEMBL
Match: A0A5D3CNI7 (TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005170 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-12
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0 

Query: 3   ELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKL-KGRFMKKYFPNNKSITRVEIAK 62
           ELWFNLEGR+ KFG+ +F  I GLN  E   +D SK+ KG+F K+YF   K+I R ++ +
Sbjct: 703 ELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRTKLHE 762

Query: 63  LFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           +F +        +V++AKLY +E FI  K  +  +++E
Sbjct: 763 VFTEMDKGRNKDVVKMAKLYILEMFILGKQLRTGINHE 800

[Close]
BLAST of Sed0007316 vs. ExPASy TrEMBL
Match: A0A1S3B0L9 (uncharacterized protein LOC103484737 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-12
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0 

Query: 3   ELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKL-KGRFMKKYFPNNKSITRVEIAK 62
           ELWFNLEGR+ KFG+ +F  I GLN  E   +D SK+ KG+F K+YF   K+I R ++ +
Sbjct: 611 ELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRTKLHE 670

Query: 63  LFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           +F +        +V++AKLY +E FI  K  +  +++E
Sbjct: 671 VFTEMDKGRNKDVVKMAKLYILEMFILGKQLRTGINHE 708

[Close]
BLAST of Sed0007316 vs. ExPASy TrEMBL
Match: A0A1S3B181 (uncharacterized protein LOC103484737 isoform X7 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-12
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0 

Query: 3   ELWFNLEGRVVKFGISEFEKIIGLNYCEEVEVDDSKL-KGRFMKKYFPNNKSITRVEIAK 62
           ELWFNLEGR+ KFG+ +F  I GLN  E   +D SK+ KG+F K+YF   K+I R ++ +
Sbjct: 609 ELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRTKLHE 668

Query: 63  LFKKGTNVHENHMVRLAKLYCMECFIDAKNFKQNVDNE 100
           +F +        +V++AKLY +E FI  K  +  +++E
Sbjct: 669 VFTEMDKGRNKDVVKMAKLYILEMFILGKQLRTGINHE 706

The following BLAST results are available for this feature:
BLAST of Sed0007316 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0060374.13.6e-1443.88uncharacterized protein E6C27_scaffold22G001730 [Cucumis melo var. makuwa] >TYK2... [more]
XP_038883715.16.7e-1343.43uncharacterized protein LOC120074618 isoform X1 [Benincasa hispida][more]
XP_038883719.16.7e-1343.43uncharacterized protein LOC120074618 isoform X5 [Benincasa hispida][more]
XP_038883717.16.7e-1343.43uncharacterized protein LOC120074618 isoform X3 [Benincasa hispida][more]
XP_038883718.16.7e-1343.43uncharacterized protein LOC120074618 isoform X4 [Benincasa hispida][more]
BLAST of Sed0007316 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0007316 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UZA21.7e-1443.88DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A0A0KI501.6e-1242.42TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 ... [more]
A0A5D3CNI76.1e-1241.84TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3B0L96.1e-1241.84uncharacterized protein LOC103484737 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B1816.1e-1241.84uncharacterized protein LOC103484737 isoform X7 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Sed0007316 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015410Domain of unknown function DUF1985PFAMPF09331DUF1985coord: 2..103
e-value: 7.4E-15
score: 55.2

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0007316.1Sed0007316.1mRNA