Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTTGTTGAGAAAATTGAAGGAAAAGTCATGCTGTATGAGTCTGAGTTCAATGAAGAAGAAGAAAACATGGAAGGATTAATGGTTCCTGATTCATACCAATCAGAAGAAGAAGAAGAAAAATGTGATTATCTCAAATCTGAGCCTCCAAGTCTTAATATAAAAATTAATAACACAATTATTTCTTTGAGTGAGCCGGGCAGCCCAAAAATAACAACAACTTCAATCTCATGCGAGCGCGACAAAGAGGAAGAGGATGATGATCGAGAAGTAGAAGAAGAAAAAGAAGAAGAAGATGATGATAGTTGTTACAAGTTCTATAGGACGTGGTTTGAGGATTATGTTGCTAAATATGGGCTTGACATCCAACATTTGGATTGTAACGACTCCTCACTCCAACAACTAGAGAAATCTTGGCTCCAAAAACAACTCTCCGCTACTCAAGTGCGTTACAAGCAAGCTCAACTTGAACTCCACTTCATCAACTTCAGATATGCTATTATCAAACAATGGCTTTCTTCCTTTTGA
ATGAGTGTTGTTGAGAAAATTGAAGGAAAAGTCATGCTGTATGAGTCTGAGTTCAATGAAGAAGAAGAAAACATGGAAGGATTAATGGTTCCTGATTCATACCAATCAGAAGAAGAAGAAGAAAAATGTGATTATCTCAAATCTGAGCCTCCAAGTCTTAATATAAAAATTAATAACACAATTATTTCTTTGAGTGAGCCGGGCAGCCCAAAAATAACAACAACTTCAATCTCATGCGAGCGCGACAAAGAGGAAGAGGATGATGATCGAGAAGTAGAAGAAGAAAAAGAAGAAGAAGATGATGATAGTTGTTACAAGTTCTATAGGACGTGGTTTGAGGATTATGTTGCTAAATATGGGCTTGACATCCAACATTTGGATTGTAACGACTCCTCACTCCAACAACTAGAGAAATCTTGGCTCCAAAAACAACTCTCCGCTACTCAAGTGCGTTACAAGCAAGCTCAACTTGAACTCCACTTCATCAACTTCAGATATGCTATTATCAAACAATGGCTTTCTTCCTTTTGA
ATGAGTGTTGTTGAGAAAATTGAAGGAAAAGTCATGCTGTATGAGTCTGAGTTCAATGAAGAAGAAGAAAACATGGAAGGATTAATGGTTCCTGATTCATACCAATCAGAAGAAGAAGAAGAAAAATGTGATTATCTCAAATCTGAGCCTCCAAGTCTTAATATAAAAATTAATAACACAATTATTTCTTTGAGTGAGCCGGGCAGCCCAAAAATAACAACAACTTCAATCTCATGCGAGCGCGACAAAGAGGAAGAGGATGATGATCGAGAAGTAGAAGAAGAAAAAGAAGAAGAAGATGATGATAGTTGTTACAAGTTCTATAGGACGTGGTTTGAGGATTATGTTGCTAAATATGGGCTTGACATCCAACATTTGGATTGTAACGACTCCTCACTCCAACAACTAGAGAAATCTTGGCTCCAAAAACAACTCTCCGCTACTCAAGTGCGTTACAAGCAAGCTCAACTTGAACTCCACTTCATCAACTTCAGATATGCTATTATCAAACAATGGCTTTCTTCCTTTTGA
MSVVEKIEGKVMLYESEFNEEEENMEGLMVPDSYQSEEEEEKCDYLKSEPPSLNIKINNTIISLSEPGSPKITTTSISCERDKEEEDDDREVEEEKEEEDDDSCYKFYRTWFEDYVAKYGLDIQHLDCNDSSLQQLEKSWLQKQLSATQVRYKQAQLELHFINFRYAIIKQWLSSF
Homology
BLAST of Sed0007188 vs. NCBI nr
Match:
KAG6607616.1 (hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 119.4 bits (298), Expect = 3.1e-23
Identity = 71/162 (43.83%), Postives = 110/162 (67.90%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAG6607616.1 3.1e-23 43.83 hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
A T G A G T G T T G T T G A G A A A A T T G A A G G A A A A G T C A T G C T G T A T G A G T C T G A G T T C A A T G A A G A A G A A G A A A A C A T G G A A G G A T T A A T G G T T C C T G A T T C A T A C C A A T C A G A A G A A G A A G A A G A A A A A T G T G A T T A T C T C A A A T C T G A G C C T C C A A G T C T T A A T A T A A A A A T T A A T A A C A C A A T T A T T T C T T T G A G T G A G C C G G G C A G C C C A A A A A T A A C A A C A A C T T C A A T C T C A T G C G A G C G C G A C A A A G A G G A A G A G G A T G A T G A T C G A G A A G T A G A A G A A G A A A A A G A A G A A G A A G A T G A T G A T A G T T G T T A C A A G T T C T A T A G G A C G T G G T T T G A G G A T T A T G T T G C T A A A T A T G G G C T T G A C A T C C A A C A T T T G G A T T G T A A C G A C T C C T C A C T C C A A C A A C T A G A G A A A T C T T G G C T C C A A A A A C A A C T C T C C G C T A C T C A A G T G C G T T A C A A G C A A G C T C A A C T T G A A C T C C A C T T C A T C A A C T T C A G A T A T G C T A T T A T C A A A C A A T G G C T T T C T T C C T T T T G A 50 100 150 200 250 300 350 400 450 500 Score = Score = Score = Score = Sequence Coil mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 4..24 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 66..100 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 84..100 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 18..38
Relationships
The following mRNA feature(s) are a part of this gene:
