![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0006952 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAATTCATATTTGGATTCCAAAACAAGCAATGTTGAAATGGAAGAAACCCCATCAAGAATTTTCCCCTGTTTGTTCTGTTCAAGGAAGTTTCAAAGCTCTCAAGCTTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGAGGAGCGCCGCGAGGAAGACGAGGCGTATAACGGACTACGCCTCGTCTTCGTCACCGCCGTTGGTTTTTGCAGCCCAACATCCTCATCCAACTCTATTGCCACAATATCCAATGTACATTGCAGCTCATGGGGCTAATCTTCATTGTTTCCCCAATAACCAACAATTGTTCTATGATGGATTTGGAGGTCCCAATTTTGAGAACATGGTTTATTATGGTGGGGTTTGTTCAAGTGATAGATATCAATGTGGGGAAGATGAGAAAAATGTGCTGAAACTTGATCATGGCAAGGAAAAAGAACAAAAACTTGATCTTTCTCTTCATTTGTAA ATGGGAAATTCATATTTGGATTCCAAAACAAGCAATGTTGAAATGGAAGAAACCCCATCAAGAATTTTCCCCTGTTTGTTCTGTTCAAGGAAGTTTCAAAGCTCTCAAGCTTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGAGGAGCGCCGCGAGGAAGACGAGGCGTATAACGGACTACGCCTCGTCTTCGTCACCGCCGTTGGTTTTTGCAGCCCAACATCCTCATCCAACTCTATTGCCACAATATCCAATGTACATTGCAGCTCATGGGGCTAATCTTCATTGTTTCCCCAATAACCAACAATTGTTCTATGATGGATTTGGAGGTCCCAATTTTGAGAACATGGTTTATTATGGTGGGGTTTGTTCAAGTGATAGATATCAATGTGGGGAAGATGAGAAAAATGTGCTGAAACTTGATCATGGCAAGGAAAAAGAACAAAAACTTGATCTTTCTCTTCATTTGTAA ATGGGAAATTCATATTTGGATTCCAAAACAAGCAATGTTGAAATGGAAGAAACCCCATCAAGAATTTTCCCCTGTTTGTTCTGTTCAAGGAAGTTTCAAAGCTCTCAAGCTTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGAGGAGCGCCGCGAGGAAGACGAGGCGTATAACGGACTACGCCTCGTCTTCGTCACCGCCGTTGGTTTTTGCAGCCCAACATCCTCATCCAACTCTATTGCCACAATATCCAATGTACATTGCAGCTCATGGGGCTAATCTTCATTGTTTCCCCAATAACCAACAATTGTTCTATGATGGATTTGGAGGTCCCAATTTTGAGAACATGGTTTATTATGGTGGGGTTTGTTCAAGTGATAGATATCAATGTGGGGAAGATGAGAAAAATGTGCTGAAACTTGATCATGGCAAGGAAAAAGAACAAAAACTTGATCTTTCTCTTCATTTGTAA MGNSYLDSKTSNVEMEETPSRIFPCLFCSRKFQSSQALGGHQNAHKKERSAARKTRRITDYASSSSPPLVFAAQHPHPTLLPQYPMYIAAHGANLHCFPNNQQLFYDGFGGPNFENMVYYGGVCSSDRYQCGEDEKNVLKLDHGKEKEQKLDLSLHL Homology
BLAST of Sed0006952 vs. NCBI nr
Match: XP_022996351.1 (protein LATE FLOWERING-like [Cucurbita maxima]) HSP 1 Score: 216.5 bits (550), Expect = 1.7e-52 Identity = 114/160 (71.25%), Postives = 132/160 (82.50%), Query Frame = 0
BLAST of Sed0006952 vs. NCBI nr
Match: XP_023532770.1 (protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.5 bits (550), Expect = 1.7e-52 Identity = 114/160 (71.25%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of Sed0006952 vs. NCBI nr
Match: XP_022931139.1 (protein LATE FLOWERING [Cucurbita moschata]) HSP 1 Score: 215.3 bits (547), Expect = 3.7e-52 Identity = 114/163 (69.94%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of Sed0006952 vs. NCBI nr
Match: KAG6606329.1 (Protein LATE FLOWERING, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036269.1 Protein LATE FLOWERING, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214.5 bits (545), Expect = 6.4e-52 Identity = 113/160 (70.62%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of Sed0006952 vs. NCBI nr
Match: XP_038888938.1 (protein LATE FLOWERING [Benincasa hispida]) HSP 1 Score: 196.1 bits (497), Expect = 2.3e-46 Identity = 109/174 (62.64%), Postives = 128/174 (73.56%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18 Identity = 65/162 (40.12%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09 Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08 Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy TrEMBL
Match: A0A6J1K4H5 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111491609 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 8.1e-53 Identity = 114/160 (71.25%), Postives = 132/160 (82.50%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy TrEMBL
Match: A0A6J1ETH7 (protein LATE FLOWERING OS=Cucurbita moschata OX=3662 GN=LOC111437406 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52 Identity = 114/163 (69.94%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy TrEMBL
Match: A0A1S3BIU8 (protein LATE FLOWERING-like OS=Cucumis melo OX=3656 GN=LOC103490048 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 3.4e-43 Identity = 103/164 (62.80%), Postives = 118/164 (71.95%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy TrEMBL
Match: A0A5A7VIQ7 (Protein LATE FLOWERING-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002620 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.2e-42 Identity = 102/162 (62.96%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of Sed0006952 vs. ExPASy TrEMBL
Match: A0A0A0LE19 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G624040 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 8.4e-42 Identity = 102/162 (62.96%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of Sed0006952 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19 Identity = 65/162 (40.12%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of Sed0006952 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 ) HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10 Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of Sed0006952 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 8.4e-10 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of Sed0006952 vs. TAIR 10
Match: AT5G57520.1 (zinc finger protein 2 ) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09 Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of Sed0006952 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 ) HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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