Sed0006890 (gene) Chayote v1

Overview


Name	Sed0006890
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Glutaredoxin domain-containing protein
Location	LG05: 5143310 .. 5147035 (+)
RNA-Seq Expression	Sed0006890
Synteny	Sed0006890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGCGCGTCTTCGAAGCAAATGGAGGCTGCCGTCGACGTGTACCGGCCAGCGCCGGCGAGCTTTGCCGTGTTCGATGTAAACGCCATCGAGGAGCGTTGGGTTAAAGTGGGGGAAGAGCCACCGTCGAAGGCGGCGGAGGCGGCGGCGGAGGAGGAGAAAGTTCTGATTCTTGGGAAGCTGAATAGTTTGGAATCTGAAACTCCTCATTCGTGGGATGAGATTAGTAAGGCCCCTGAACACCTCAAACCCGCCGGTTCCAACCTCCAAAAACCGTTTTTCCTAATCCAGGTATTAAATCTTGGTTCATATTATCAATCTACTTTTACTATTAAATGTTCGTGATGTATTTATTTTCAGTTAAATTATGATTTTTTATTTTATATAAAAGTTGAAATATGGTTATGGTTTCAATGATAGTTCTAAGATCATTAGTTTGTTTCATAATTATTTTATTTTTTATTTTTAAAATTTAAATCTACAATAACTATTTTATTATATGTTTTTTCTCTATGCATGTCTATATCTTACTTATATTTGTAAACACCAAAACCAAAATTTAAAAACTAAGTTCCATTTGATAACATTTTGTTTTCGTTTTCTGTTTCTAATTTTTCATTTTTGGTTTTAGGTTTAAAAAATAATAACGACACATTTAATAATTAATTTTAGTTTTATGTTTTTAAAAATTAAAACCCAAAAAAAACTGTTTTTCTTTAAGATCACGTGATTTTTTTAGTTTTTTATTATTTATTCTTGAATTTTTCGTAATTGTTTAGAACAAAATATATATATATATATAATTTTATTTTTATAAAAGCTATTTTTTAATTTTTAGAATTTCTTTAATATTTTTAAAAGGTTTTAAAAATTTTAAAACTAAATTTGGTTATCAAATAAATTTGCTTTCTTTCAAAAAAGTTTAAAAAACAAAAAAACAAAAAAAATTGGTTATCAAACGAGACCTAAAAAAATAATTTTTAAAAGTTTGTTTTTGTTTTTAAAATTTTGTTCGGATTCAAATACTTTCTTAAAAAAAATTTAGATACATTGTATGAAAGATGTTTCAAATTATAGAAAATATGAGTAAATTAAATTTAAATTACAAAAAAAAAAAAATTATGGCCCAATTTGATAACCATTTCGTTTTTTGTTTTTTGTTTTTTTTTTTTTTACTTTTTTAAAACAAAATAGGTTTGTTTTGTTGGTAACTAATTTTGGTTTTTGTTTTAGAAATTTTAAAAATATTAAAGAAATTCTAAAAACTAAACAAAATTAACTTTTAAAAACAAGTTTTTGTTTTTGTTTTTAAAAAAGTATGAAATGAATTATCAAACGTATGCGGTTTTTATTTTTTAAAACAAAAATAAAAAATGAAAAATTATAAACAAAAAACTAAATAGTTATTAAACGAGGTCTAAATGATTATCAGATGAAGCTTAAATTTTTTTTAAAAAAATCATTTTATAACAAAATTATATTTTTGAAGTATATGAACCAAAATATAATGAATTTCAAATTTTATGAATCAAAATTTAACTTAAATTTTTATTATGAATAAAGTTTAAGCAAACATAATTTTATCAATGAAAACATACTGCGGATCAATTTTGAAGATGGACATCACGTATCAATTTGTAACAAGATAATTACGGGAGTTTCAAATGTTTATGAATTCAAAAAAGAAAAAAGAATATTTTTTTGAGGATCAATGCTTAGACTTTTTTAACTAATTAAGAATGAAATTTTATGTTTTTTTTTTTACATTATGTGGGGTTATGGAATCGAAACTCCCGTCTATATGTATATTGGGTCACCTAACCATAGATTAAAGGCATGGACAATATATATAAAAGAAATATTTTATTTGTAAAATTAATAATTTTTTACAGGAAGATCAATTCTTTTGAAACTCTAGGAACAAAAATTATAAATTTTTAAAAAAAAAAAATTATAAGAGATTTTTTTTTTGTGGTGTTTAAAGCATCTATATCTATGAAATTGCAGCCACCACTCTACCCAAATCTTTTTCATATATAAATTTTTCTATTTTTTCTATAGCTTTTTAAATTTAATTAAGATGGATGAAGAAGAGCTCAGTTTTCAAACAATTAAGATGTGAATTCAAATTCACGAATTCTTAATATAAGTTATATTAACTTTGGTTCATTTCAAAAAAGAAAAAAAACTTTGGTTGGCTTAATGTTTTTTACTATTTGCTTGCATAAAAACCATATATGATTCTATGTAATACAAATATACCACATCAAAAATCAATGAAAATTTGAGTAACAGAAGTGTAGACTAATACTATTCTGGGAGGGTCTGTTTGTTTGGCATATTTAGATAAGATTTAATTTTAGGATTTATTAAATACTACTAAAAAACCTACATCCAAACGAGTTTTTATTAATCCATCCGTATTTTTACTTTTATAAATAACTATGGTTTCTAATAATTCCTTTCAAATCAATCACAATAATTCATTTTTAGCTACTCATTTTTTTATCATTTTTTTTTAATTATTAAAAATAACTACTCATTTTAAATTTATATCCAAACAAGGTTTTGACTATAACTTCTCTACACAAAAATTATGCTCAAACGAGTTTTTTACTACAATTCTCAATTTTTAACTACTCAACATAACTCCTCAATATAACTCCTTAAAGTAAATCTCACATGAATATGTCAAACAAACAGCCCCAAGAATTACCGAACACTCGATACTAATAACTAAAAAAGTGAAATGCATATTTTATAGATGTATATATTTTTGGCAACTTTTTTCTTGAAATATCCAAATCCATGGAAATCACCATTTCATAACATGTCTATAAAATTAGACAACTACTCTTTTTTTTCTAATAAAAAAAAAACTCGTTCGTAAACCCTGTTGCAAAACTGGGACCAACGAAACCAGCCGCGGTTGTCGCCGTCCGTAAACAAGCACAACGTAAGAGCTCGAGCTTCCACACAGTGGCAGATCTTGATGCAAAGCTATCGTCCTCCACCAAGCTGGCAACCAAGCCTAAGCCTTTCGGGTTGAGAAACGCAGAGTCTCTCCGAACCGAGCCTCCAAAACCGAAGCCAAGAACTGGCGATCCTGACCGATTCACGTCTGTTAAAGAGAACATGTTTCTAGTGAAAGACAGAGATGAGAGGGAAAGAGAAGGGTATTAGGTTAGTATTAACATCCATCTTGAAATTAATTGGTTGATGAGAATAGTAACTCGATTATCTTATAAATATTTAAAGATGAAATAGTTTTTTTATCCTATAAATTGTTAGAAGGTCTCCTCATTTATAATATGGTATCAAAGTCCTTAAAACCTAAATGAATACTATGAAACCAAAAGTGATACCCTCTTGATGTCAAAGATTCCACGTTAAAAACTATATATAAGATAGATGAGCTATTTCTTTCATCAGTCAATTAATTTTGAGATGGATGCTTATAGTATTTAACAAGGGGAAGAAGCTAGGTCCAGTTTGACCCGTTGAGTAAGTTCCTGAAGAGGTGTCCGCTCGGAGGGGCAAGACAATGGTTTGCATACGATGTCGTTGACGAGTTGTTCGGGGGAAGGGTGTGGTGGATCAAGATTTGTGCCATGTTTAGAGTGTGGAGGAAGCTGTAAAGTGATTAAAAGAGGAGACAAAGGAGAGATGTGGGAGCTTGTAATGAAAATGGTTAGACTCAGTGCCCTGCTTGTCATTCAATAA

mRNA sequence

ATGGGCTGCGCGTCTTCGAAGCAAATGGAGGCTGCCGTCGACGTGTACCGGCCAGCGCCGGCGAGCTTTGCCGTGTTCGATGTAAACGCCATCGAGGAGCGTTGGGTTAAAGTGGGGGAAGAGCCACCGTCGAAGGCGGCGGAGGCGGCGGCGGAGGAGGAGAAAGTTCTGATTCTTGGGAAGCTGAATAGTTTGGAATCTGAAACTCCTCATTCGTGGGATGAGATTAGTAAGGCCCCTGAACACCTCAAACCCGCCGGTTCCAACCTCCAAAAACCGTTTTTCCTAATCCAGGTATTAAATCTTGCCGCGGTTGTCGCCGTCCGTAAACAAGCACAACGTAAGAGCTCGAGCTTCCACACAGTGGCAGATCTTGATGCAAAGCTATCGTCCTCCACCAAGCTGGCAACCAAGCCTAAGCCTTTCGGGTTGAGAAACGCAGAGTCTCTCCGAACCGAGCCTCCAAAACCGAAGCCAAGAACTGGCGATCCTGACCGATTCACGTCTGTTAAAGAGAACATGTTTCTAGTGAAAGACAGAGATGAGAGGGAAAGAGAAGGAGGTGTCCGCTCGGAGGGGCAAGACAATGGTTTGCATACGATGTCGTTGACGAGTTGTTCGGGGGAAGGGTGTGGTGGATCAAGATTTGTGCCATGTTTAGAGTGTGGAGGAAGCTGTAAAGTGATTAAAAGAGGAGACAAAGGAGAGATGTGGGAGCTTGTAATGAAAATGGTTAGACTCAGTGCCCTGCTTGTCATTCAATAA

Coding sequence (CDS)

ATGGGCTGCGCGTCTTCGAAGCAAATGGAGGCTGCCGTCGACGTGTACCGGCCAGCGCCGGCGAGCTTTGCCGTGTTCGATGTAAACGCCATCGAGGAGCGTTGGGTTAAAGTGGGGGAAGAGCCACCGTCGAAGGCGGCGGAGGCGGCGGCGGAGGAGGAGAAAGTTCTGATTCTTGGGAAGCTGAATAGTTTGGAATCTGAAACTCCTCATTCGTGGGATGAGATTAGTAAGGCCCCTGAACACCTCAAACCCGCCGGTTCCAACCTCCAAAAACCGTTTTTCCTAATCCAGGTATTAAATCTTGCCGCGGTTGTCGCCGTCCGTAAACAAGCACAACGTAAGAGCTCGAGCTTCCACACAGTGGCAGATCTTGATGCAAAGCTATCGTCCTCCACCAAGCTGGCAACCAAGCCTAAGCCTTTCGGGTTGAGAAACGCAGAGTCTCTCCGAACCGAGCCTCCAAAACCGAAGCCAAGAACTGGCGATCCTGACCGATTCACGTCTGTTAAAGAGAACATGTTTCTAGTGAAAGACAGAGATGAGAGGGAAAGAGAAGGAGGTGTCCGCTCGGAGGGGCAAGACAATGGTTTGCATACGATGTCGTTGACGAGTTGTTCGGGGGAAGGGTGTGGTGGATCAAGATTTGTGCCATGTTTAGAGTGTGGAGGAAGCTGTAAAGTGATTAAAAGAGGAGACAAAGGAGAGATGTGGGAGCTTGTAATGAAAATGGTTAGACTCAGTGCCCTGCTTGTCATTCAATAA

Protein sequence

MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEKVLILGKLNSLESETPHSWDEISKAPEHLKPAGSNLQKPFFLIQVLNLAAVVAVRKQAQRKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVKENMFLVKDRDEREREGGVRSEGQDNGLHTMSLTSCSGEGCGGSRFVPCLECGGSCKVIKRGDKGEMWELVMKMVRLSALLVIQ

Homology

[Close]

BLAST of Sed0006890 vs. NCBI nr
Match: XP_038907226.1 (uncharacterized protein LOC120093006 [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 1.0e-51
Identity = 126/197 (63.96%), Postives = 142/197 (72.08%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEE-PPSKAAEAAAEEE----K 60
           MGC+SSK++EA VDVYRPAPASFAVFD+NAIEE WVKV +E PPS AA++  EE+     
Sbjct: 1   MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMDELPPSPAADSVKEEKPPIVP 60

Query: 61  VLILGKLNSLESETPHSWDEISKAPEHLKPA-----GSNLQKPFFLIQVLNLAAVVAVRK 120
           V IL KL+S ESE PHSWDE+SKA E LKPA     G    KP            V V K
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTGPPPTKP-------PAVPAVVVAK 120

Query: 121 QAQRKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSV 180
           Q  RKSSSFHTVA+LDAKLS S K A + KP GLR A SLR  P KP+PRTGDPDRF SV
Sbjct: 121 QPPRKSSSFHTVAELDAKLSPSAKPAAESKPSGLRKAASLRPGPEKPEPRTGDPDRFKSV 180

Query: 181 KENMFLVKDRDEREREG 188
           KEN+FLV+DR+EREREG
Sbjct: 181 KENIFLVRDREEREREG 190

[Close]

BLAST of Sed0006890 vs. NCBI nr
Match: XP_038907226.1 (uncharacterized protein LOC120093006 [Benincasa hispida])

HSP 1 Score: 52.0 bits (123), Expect = 8.8e-03
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0


Query: 209 EGCGGSRFVPCLECGGSCKVIK 231
           EGCGG+RFVPCLECGGSCKVIK
Sbjct: 314 EGCGGARFVPCLECGGSCKVIK 335

HSP 2 Score: 208.0 bits (528), Expect = 9.6e-50
Identity = 121/194 (62.37%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEK----- 60
           MGC SSK++EA VDVYRPAPASFAVFD+NAIEE WVKV EE P    E   +EEK     
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VLILGKLNSLESETPHSWDEISKAPEHLKPAGSNLQKPFFLIQVLNLAA--VVAVRKQAQ 120
           V IL KL+S ESE PHSWDE+SKA E LKPA   + KP         AA   V V KQ+ 
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTKPPPTNPPTVAAATPAVVVTKQSP 120

Query: 121 RKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVKEN 180
           RKSSSFHTVA+LDAKLS S+K A + KP GLR   + R  P KP+ RTGDPDRF SVK+N
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPAAESKPAGLRKTATFRPGPEKPEQRTGDPDRFKSVKDN 180

Query: 181 MFLVKDRDEREREG 188
           +FLV+DR+EREREG
Sbjct: 181 IFLVRDREEREREG 194

[Close]

BLAST of Sed0006890 vs. NCBI nr
Match: KAA0042669.1 (Glutaredoxin domain-containing protein [Cucumis melo var. makuwa] >TYK06072.1 Glutaredoxin domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-02
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0


Query: 209 EGCGGSRFVPCLECGGSCKVIKRGDKGE 237
           EGCGG+RFVPC ECGGSCKVIK GD  E
Sbjct: 318 EGCGGARFVPCYECGGSCKVIK-GDTKE 344

HSP 2 Score: 206.5 bits (524), Expect = 2.8e-49
Identity = 120/194 (61.86%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEK----- 60
           MGC SSK++EA VDVYRPAPASFAVFD+NAIEE WVKV EE P    E   +EEK     
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VLILGKLNSLESETPHSWDEISKAPEHLKPAGSNLQKPFFLIQVLNLAA--VVAVRKQAQ 120
           V IL KL+S ESE PHSWDE+SKA E LKPA   + +P         AA   V V KQ+ 
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPPPTNPPTVAAATPAVVVTKQSP 120

Query: 121 RKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVKEN 180
           RKSSSFHTVA+LDAKLS S+K A + KP GLR   + R  P KP+ RTGDPDRF SVK+N
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPAAESKPAGLRKTATFRPGPEKPEQRTGDPDRFKSVKDN 180

Query: 181 MFLVKDRDEREREG 188
           +FLV+DR+EREREG
Sbjct: 181 IFLVRDREEREREG 194

[Close]

BLAST of Sed0006890 vs. NCBI nr
Match: XP_004143951.1 (uncharacterized protein LOC101208965 [Cucumis sativus] >KGN50006.1 hypothetical protein Csa_000194 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 8.2e-49
Identity = 118/194 (60.82%), Postives = 136/194 (70.10%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEK----- 60
           MGC SSK++EA VDVYRPAPASFAVFD+NAIEE WVKV EE P    E   +EEK     
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VLILGKLNSLESETPHSWDEISKAPEHLKPAGSNLQK--PFFLIQVLNLAAVVAVRKQAQ 120
           V IL KL+S ESE PHSWDE+SKA E LKPA  ++ +  P   + V      V V KQ  
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRSVTEPPPTNPLAVTAATPAVVVAKQPP 120

Query: 121 RKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVKEN 180
           RKSSSFHTVA+LDAKLS S+K   + K  GLR   + R  P KP+ RTGDPDRF SVKEN
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPTAESKTAGLRKTATFRPGPEKPEQRTGDPDRFKSVKEN 180

Query: 181 MFLVKDRDEREREG 188
           +FLV+DR+EREREG
Sbjct: 181 IFLVRDREEREREG 194

[Close]

BLAST of Sed0006890 vs. NCBI nr
Match: XP_004143951.1 (uncharacterized protein LOC101208965 [Cucumis sativus] >KGN50006.1 hypothetical protein Csa_000194 [Cucumis sativus])

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-02
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0


Query: 209 EGCGGSRFVPCLECGGSCKVIKRGDKGE 237
           EGCGG+RFVPC ECGGSCKVIK GD  E
Sbjct: 318 EGCGGARFVPCYECGGSCKVIK-GDTKE 344

HSP 2 Score: 203.0 bits (515), Expect = 3.1e-48
Identity = 150/340 (44.12%), Postives = 174/340 (51.18%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEKVL--- 60
           MGCASSK++EAAVDVYRPAPASFAVFD+NAIEE WVKV EEP S A+    E+  ++   
Sbjct: 1   MGCASSKRIEAAVDVYRPAPASFAVFDINAIEEPWVKVVEEPQSPASPVKEEKAAIVPVP 60

Query: 61  ILGKLNSLESETPHSWDEISKAPEHLKPA-GSNLQKPFFLI-----QVLNLAAVVAVRKQ 120
           IL KL+SLESETPHSWDE+SKA E LKPA    LQ P   +        +  A  AV KQ
Sbjct: 61  ILEKLSSLESETPHSWDEVSKALEDLKPALQRELQPPPKPVTPNQEPPPSKPAAAAVGKQ 120

Query: 121 AQRKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVK 180
           A RKSSSFHTVA+LD+KL+SSTK A K      RN  + + EP  P+PRTGDPDRF SVK
Sbjct: 121 APRKSSSFHTVAELDSKLTSSTKPAAK----SFRNGPT-KPEPTIPEPRTGDPDRFRSVK 180

Query: 181 ENMFLVKDRDEREREG--------------------------------GVRS-------- 230
           EN+FL++DR EREREG                                GVR         
Sbjct: 181 ENIFLLRDRQEREREGQKPVRYDPLSEFPEKCPPGGVETVVLYTTSLRGVRRTFEDCNRV 240

[Close]

BLAST of Sed0006890 vs. ExPASy TrEMBL
Match: A0A5D3C4A9 (Glutaredoxin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001730 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 4.7e-50
Identity = 121/194 (62.37%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEK----- 60
           MGC SSK++EA VDVYRPAPASFAVFD+NAIEE WVKV EE P    E   +EEK     
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VLILGKLNSLESETPHSWDEISKAPEHLKPAGSNLQKPFFLIQVLNLAA--VVAVRKQAQ 120
           V IL KL+S ESE PHSWDE+SKA E LKPA   + KP         AA   V V KQ+ 
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTKPPPTNPPTVAAATPAVVVTKQSP 120

Query: 121 RKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVKEN 180
           RKSSSFHTVA+LDAKLS S+K A + KP GLR   + R  P KP+ RTGDPDRF SVK+N
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPAAESKPAGLRKTATFRPGPEKPEQRTGDPDRFKSVKDN 180

Query: 181 MFLVKDRDEREREG 188
           +FLV+DR+EREREG
Sbjct: 181 IFLVRDREEREREG 194

[Close]

BLAST of Sed0006890 vs. ExPASy TrEMBL
Match: A0A5D3C4A9 (Glutaredoxin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001730 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.6e-03
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0


Query: 209 EGCGGSRFVPCLECGGSCKVIKRGDKGE 237
           EGCGG+RFVPC ECGGSCKVIK GD  E
Sbjct: 318 EGCGGARFVPCYECGGSCKVIK-GDTKE 344

HSP 2 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 120/194 (61.86%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEK----- 60
           MGC SSK++EA VDVYRPAPASFAVFD+NAIEE WVKV EE P    E   +EEK     
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VLILGKLNSLESETPHSWDEISKAPEHLKPAGSNLQKPFFLIQVLNLAA--VVAVRKQAQ 120
           V IL KL+S ESE PHSWDE+SKA E LKPA   + +P         AA   V V KQ+ 
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPPPTNPPTVAAATPAVVVTKQSP 120

Query: 121 RKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVKEN 180
           RKSSSFHTVA+LDAKLS S+K A + KP GLR   + R  P KP+ RTGDPDRF SVK+N
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPAAESKPAGLRKTATFRPGPEKPEQRTGDPDRFKSVKDN 180

Query: 181 MFLVKDRDEREREG 188
           +FLV+DR+EREREG
Sbjct: 181 IFLVRDREEREREG 194

[Close]

BLAST of Sed0006890 vs. ExPASy TrEMBL
Match: A0A0A0KQR0 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G148770 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 4.0e-49
Identity = 118/194 (60.82%), Postives = 136/194 (70.10%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEK----- 60
           MGC SSK++EA VDVYRPAPASFAVFD+NAIEE WVKV EE P    E   +EEK     
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSAIVP 60

Query: 61  VLILGKLNSLESETPHSWDEISKAPEHLKPAGSNLQK--PFFLIQVLNLAAVVAVRKQAQ 120
           V IL KL+S ESE PHSWDE+SKA E LKPA  ++ +  P   + V      V V KQ  
Sbjct: 61  VPILEKLSSFESEAPHSWDEVSKALEDLKPALRSVTEPPPTNPLAVTAATPAVVVAKQPP 120

Query: 121 RKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVKEN 180
           RKSSSFHTVA+LDAKLS S+K   + K  GLR   + R  P KP+ RTGDPDRF SVKEN
Sbjct: 121 RKSSSFHTVAELDAKLSPSSKPTAESKTAGLRKTATFRPGPEKPEQRTGDPDRFKSVKEN 180

Query: 181 MFLVKDRDEREREG 188
           +FLV+DR+EREREG
Sbjct: 181 IFLVRDREEREREG 194

[Close]

BLAST of Sed0006890 vs. ExPASy TrEMBL
Match: A0A0A0KQR0 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G148770 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.6e-03
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0


Query: 209 EGCGGSRFVPCLECGGSCKVIKRGDKGE 237
           EGCGG+RFVPC ECGGSCKVIK GD  E
Sbjct: 318 EGCGGARFVPCYECGGSCKVIK-GDTKE 344

HSP 2 Score: 203.0 bits (515), Expect = 1.5e-48
Identity = 150/340 (44.12%), Postives = 174/340 (51.18%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEKVL--- 60
           MGCASSK++EAAVDVYRPAPASFAVFD+NAIEE WVKV EEP S A+    E+  ++   
Sbjct: 1   MGCASSKRIEAAVDVYRPAPASFAVFDINAIEEPWVKVVEEPQSPASPVKEEKAAIVPVP 60

Query: 61  ILGKLNSLESETPHSWDEISKAPEHLKPA-GSNLQKPFFLI-----QVLNLAAVVAVRKQ 120
           IL KL+SLESETPHSWDE+SKA E LKPA    LQ P   +        +  A  AV KQ
Sbjct: 61  ILEKLSSLESETPHSWDEVSKALEDLKPALQRELQPPPKPVTPNQEPPPSKPAAAAVGKQ 120

Query: 121 AQRKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVK 180
           A RKSSSFHTVA+LD+KL+SSTK A K      RN  + + EP  P+PRTGDPDRF SVK
Sbjct: 121 APRKSSSFHTVAELDSKLTSSTKPAAK----SFRNGPT-KPEPTIPEPRTGDPDRFRSVK 180

Query: 181 ENMFLVKDRDEREREG--------------------------------GVRS-------- 230
           EN+FL++DR EREREG                                GVR         
Sbjct: 181 ENIFLLRDRQEREREGQKPVRYDPLSEFPEKCPPGGVETVVLYTTSLRGVRRTFEDCNRV 240

[Close]

BLAST of Sed0006890 vs. ExPASy TrEMBL
Match: A0A6J1H3T8 (uncharacterized protein LOC111459378 OS=Cucurbita moschata OX=3662 GN=LOC111459378 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 3.7e-47
Identity = 120/196 (61.22%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 1   MGCASSKQMEAAVDVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEKVL--- 60
           MGC SSK++EA VDVYRPAPASFAVFD+NAIEE WVKV EEP S A+    E+  ++   
Sbjct: 1   MGCTSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVVEEPQSPASPVKEEKAAIVPVP 60

Query: 61  ILGKLNSLESETPHSWDEISKAPEHLKPA-GSNLQKPFFLI-----QVLNLAAVVAVRKQ 120
           IL KL+SLESETPHSWDE+SKA E LKPA    LQ P   +        +  A  AV KQ
Sbjct: 61  ILEKLSSLESETPHSWDEVSKALEDLKPALQRELQPPPKPVTPNQEPPPSKPAAAAVGKQ 120

Query: 121 AQRKSSSFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRFTSVK 180
           A RKSSSFHTVA+LD+KL+SSTK A K      RN  + + EP  P+PRTGDPDRF SVK
Sbjct: 121 APRKSSSFHTVAELDSKLTSSTKPAAK----SFRNGPT-KPEPTIPEPRTGDPDRFRSVK 180

Query: 181 ENMFLVKDRDEREREG 188
           EN+FL++DR EREREG
Sbjct: 181 ENIFLLRDRQEREREG 191

[Close]

BLAST of Sed0006890 vs. TAIR 10
Match: AT1G64500.1 (Glutaredoxin family protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-18
Identity = 97/359 (27.02%), Postives = 139/359 (38.72%), Query Frame = 0


Query: 1   MGCASSKQMEAAV--DVYRPAPASFAVFDVNAIEERWVKVGEEPPSKAAEAAAEEEKVLI 60
           MGC SSKQ +A V  DVY+P P+SFAVFDVNAI+E W+K   E   K   +   +     
Sbjct: 1   MGCTSSKQAKANVVADVYKPPPSSFAVFDVNAIQEPWLKFEHEDDEKPPRSTVFDRLDED 60

Query: 61  LGKLNSLESETPHSWDEISKAPE-HLKPAGSNLQKPFFLIQVLNLAAVVAVRKQAQRKSS 120
               +    + P +W+E+SK+ E  LKPA   ++ P    +V ++       ++  RKS+
Sbjct: 61  DDDDDDDGDDAPKTWEEVSKSLETKLKPAA--VKPP----EVDSVKPPATPPRRLPRKSA 120

Query: 121 SFHTVADLDAKLSSSTKLATKPKPFGLRNAESLRTEPPKPKPRTGDPDRF----TSVKEN 180
           SFHT+ +L+ +   S           L+  ES+    P+   RT           SVKEN
Sbjct: 121 SFHTLDELEVRAKRSIAAQIPTTMVKLKRTESMSKLRPESDDRTESTQSSYSGPRSVKEN 180

Query: 181 MFLVKDRDEREREG----------------------------------GVRSEGQD---- 240
           +F+ +DR+ RE+EG                                  GVR   +D    
Sbjct: 181 IFVKRDRERREKEGNKKPVMNWDPLREFPEKCPPGGGEGLIVYTTSLQGVRRTYEDCMRV 240

Query: 241 ------------------------------------------------NGLHTMSLTSCS 244
                                                            G   ++  + +
Sbjct: 241 RAIMEQQGVVVDERDVSLDAGVLSELKELLQDEASVAPPRVFVKGRYLGGAAEVTAMNEN 300

The following BLAST results are available for this feature:

BLAST of Sed0006890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907226.1	1.0e-51	63.96	uncharacterized protein LOC120093006 [Benincasa hispida]	[more]
XP_038907226.1	8.8e-03	95.45	uncharacterized protein LOC120093006 [Benincasa hispida]	[more]
KAA0042669.1	1.2e-02	82.14	Glutaredoxin domain-containing protein [Cucumis melo var. makuwa] >TYK06072.1 Gl...	[more]
XP_004143951.1	8.2e-49	60.82	uncharacterized protein LOC101208965 [Cucumis sativus] >KGN50006.1 hypothetical ...	[more]
XP_004143951.1	1.2e-02	82.14	uncharacterized protein LOC101208965 [Cucumis sativus] >KGN50006.1 hypothetical ...	[more]

BLAST of Sed0006890 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0006890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4A9	4.7e-50	62.37	Glutaredoxin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3C4A9	5.6e-03	82.14	Glutaredoxin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KQR0	4.0e-49	60.82	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G14877...	[more]
A0A0A0KQR0	5.6e-03	82.14	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G14877...	[more]
A0A6J1H3T8	3.7e-47	61.22	uncharacterized protein LOC111459378 OS=Cucurbita moschata OX=3662 GN=LOC1114593...	[more]

Pages

BLAST of Sed0006890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64500.1	1.6e-18	27.02	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..192
None	No IPR available	PANTHER	PTHR45669	GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED	coord: 209..235 coord: 1..185
None	No IPR available	PANTHER	PTHR45669:SF7	F1N19.7	coord: 1..185
None	No IPR available	PANTHER	PTHR45669:SF7	F1N19.7	coord: 209..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006890.1	Sed0006890.1	mRNA