Sed0006842 (gene) Chayote v1

Overview


Name	Sed0006842
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Basic helix-loop-helix transcription factor
Location	LG08: 1843988 .. 1852767 (-)
RNA-Seq Expression	Sed0006842
Synteny	Sed0006842

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAAGATTGAATTTCACAAACAAAAGTTTTAGATCCAAATCAATTCTCTGTCCTTTTACCCTCGCAGATTTCGAGCTTCTGATCAACTCCGGCCATTAACAAAGATAAAGTTGCAGAGTCGAACTCCATTATCGTTCTGCCAAAGCTCACCGCGCCGGAACTGTATTCGACTCGGTAACACTATCTGAATTTCAATTTCGTTTCAATTCGATTTCAAACGCGCGATTGCTGTTCATACTGGAATGAAATCTAATCTGTATCTTGAATTGATAGATCTCTTGAATTTCGTCGCAATTGGCGGAGAATTCTCGGTAGAACGATTCATCCGGATTGAAGAATTGACAAATTAGAATAACAAAGATAAAGTTGCAGAATCAAACTCCATTATCGTTCTCCCAAAGCTCTCCGGCGCCGGAACTGTATCCGATTCGGTAACACTCTCTGAATTCAATTTCAAACGCGCGATTACTGTTCTTAGTGTAATGAGCATGAATCTGTATCTTGAATGGATAGATCTCCTTGAAATCTGTTGTGGCAGGGAATTCTCGGTCGAAATCGTCAATTCTTTCGGAATTCAATGATCGGAAGCGATTTTCTCGAGAAACAACCAGAGAATTGAAGAATCGCGCCAATTCGGGTATTAGAAAACCTAGCTGAGTCGTACAGAGATTTGTGAACGTTTTCTAAGGCTGGTGTGGATCTAAGAATTGATTCCAGAATTTTCTTGATCTTTTTCGCTCTAGAACTCCTCAATCGAGCTCTGAATTTCCAATAGCTGAATCAAAATTCCGTGAGGATTCATTTTCCTGTTGATTGTGAATTCCAAATTTGGCGAAAATTGCGATGGAACTTCCTCAATCTCGTCCGTTTGGAGCCGATCAAGGTACTTTTAATTCTCTTCCTCGCAAATCAAATTTTACTCGGATTACTAATTTTCCAATCCAATTGTTCTTCAACTACCAGTTCTACCAGGAAATTGATTCATTAACGTTTTTAGTTTCGACTGTATAATTACGATTAGATTCTAAAATCCACAAACCGAATTGATTTAACGGAATACATATCTTGAATCTGGTTGAACAGGAAGCAAATCAACACACGACTTCCTCTCTCTGTACACACATTCAAGTCCACAGCAAGATCCAAGACCATCCCCACAAGGTATTCATTAATTTAATTTCAGTTAATTTCAATTTTTTGTTTAGTACATATCGGGAGAGGGTGGACAAATACAGATTCTCGGGCTCAAACCTTTGACTCTTGTGTTGAACCGGTGTACAACCAAACATTGAAATCATTGCATCACTCATTCATTCGATAGTTAATTTCAATTTTGGTCATGAATTTAATAACATATCGGCTTTCATTATAAGTTTGGTACTTATTGATTAGAGTCTTTTCATATTTCAAGAACTAAAATTTTAGAATTTAATCATCTAATTTTATAATACCTTAAAGATTGTACATTGTTTTCAAATCGGGGAGGACGACCACAAATTACTTATAAGATATTGCTTTTATAAAATGAGAGTGAAATACAATTTTTCAAAAAAAAAAAAAAACTTATCATTTCTAATTGTTAGCCAAATAAATAATTGGAATATAGTTAATCAGTTGCAAATGACTAAATTATAAGTCAAGTAACTAATCAAATAAAACAATTACATCATTAACATATTAATAGTAAGTTTCCACATATTATCATATGGACTATATTTTAGTTTTTATCAAATCATAATAATTGATTTTTTTTATTACATGGATTAATTCTAATGTTGGTTAGAATTAAATTATTGTCGTTAAAATGATAGGAATTAAACTCTTTATTATTATTATTTTTATTTTTTATAAATCACAGGAATTTATAATTTAGGTTAACATATATTATAGGGGAAGGGAAAATCGAGAAACATATAGCACGTGACACTCATTGAAACATGGATCTGTGGTCAAGAAACGTTTAAAAGCGTAATCTCGGGCGGGGTCTGGCTGGGCTAACCGTATAGGCTGATGAAATTCTTACAAAAAGCGCTAATTTTCATGTTGGCGTTTGGTCGTTTTTATTTATTATTATTATTTTTTAAATCTATTACTTATTCTTTTGAATGTCGATGAAATTTCCTTACAACATTTTATGTGTACGACATCAATAAAATATAAATATATTTTTAATATTTTTATCTGTAAAATAAAATTTCGTGATTCTAATATGTCATATAGGGTGTGTTTGAGTCCCGTTATGTGAAAGGCTTTGTTGGTTATAATAACTCAACCGATGTTTGCTCCATCGTTTATTATAAACGGTGGTTACTTAAACCTCCGTGCCCATTTGTCTAAACCGTACATATATATCATTTTTTGTTGCATAACCAGCTCCTCAAACACCGTTTTATCATAATTCTTGTTATAATAACTTGTCCCTCAAACACCATTTATAATAACTGACCATTTATTATAACCTTCCGTCTATTATAACCAAACCGGTGTTCCAAACACACCCATAGACAAATTGTACGACATTACTACATTTTTATGTGTACGAAAGTTTTCCCCTAATCTAAATAATCATTATAGAACTCTAGGCCATTATGTGAATTCAAAAAATATGGTAGGCCAACAAATTAATTAAATTTTCAATTGACAAAGGAGAACAAATATAGAAAGATATTTTTTTTGAATGGAAAGATAGATGCTAACTAGAGTAATAACTTAATCAATACGTCCATGATCTCCCTTAATTGTTGTTGATCTCAAAATAGCAACTATAAGTTGTGAAGATAGCCGAGTTATCTTGATTTTGAAAAAGATAAACATTTTTTCTCGAGAAGATAAATATATCATATATGTTAGATACATGGTGGGTATCCGAAAATTCTTGATCAAAGAAATTTTGTTATTTATAGTAGAATTAATTGATAAATAAACCCTATTGAAAATTTTAAGACATAAAAAAGTACTACATCGAAAGTCATGCTAATTAGAGTGTAATCAAGTGTTTTCTATAACATAATGATTGTAATTCAACGACATAAGTATATATCGATGATAAAGATATTATAATTTGAATCTCCCTCCTTAGTTATTGGAAGACTAAGCTAGGTTTTTTTGGTTTTATAAGCTAGTATCTAATTGAACAGGTGGTTATCTGAAGACACACAATTTCCTGCAACCACACGAGCGAAAAAGGAAGGTCATTACCAAGGAAGAGACAGATGGAGAGAGGCCACCACCACCACCAGTGCCACCGCCTTGGCCTTCCATTGAGAATTTTCTCACAAGAGGGATTGAGACTTACAGTATAAGCCACGTTTCGTATTTCAATCAGAGGTTTCAGCCGAAGCCAGAAGGATTGGTTTTCGCTGGTGCTCAATCGAGTAGCAGCACTGTCGAGAGAAACAATGAGAATTCCAATGCCGCTTCTTTCACCACGCCCGAAAATAAACTCACTCAGACAGAAGAACGTGCAGTCAAAAAGGGAAAGACAGGGATGGAGAATACTGTGAGAGACAGGCCTTATGGTATGATCTTATTAACCTTCTTCATTTGCATGCATGCCAAACTTAATATTATATTTTAGAATTATTTCGTGTGTTAGAATAATAAAAAATTTAGGAATTAGTGATTAAATAATAGATAAAATCTATATTTTTATATTTTCTCCGAAGATGCATAAATTTATTATAATTTATCTATTTCACCTTGGAATGTAAGTTTCTGTTTCCGTTTTTTTTTTTTTTTAATTCAACAACAAATCTGAAAATTTGAAATCATAACCAATTCTTAGTTACTAAATCATACATTGTAACATTAAATCTATTACTATCGAATAGACGGGTAATCCAAATTTGTGTTCTTTTTAAAACACTTTAAATAGAAAAATATGTGATTTTTTATAACAATTTTGAAGGAAACCAATGACGTCAATAAAATGTACATTTATAGAAAAAAAAAAAAAAACTTCCCTACACATTTGATGATGTGGCAGGATTAAATATCACAAAAATTCATATGCATTTTAATATTTTTATCATAAAAATGTATAATTGTAGGAGAGTTTCCTAACAAAAGTGTGCAACGAAAAAAGTTAATTTATAAAAGAAATATCAATCTGCTTCTCACTTATTAGAAGTACACAAATATACATTCATTTGTAGTTTTGATGATTAAATTCCTGAAATTGTCCATGAAACATAGATTTCACGCGAATTTATATCATTATACTAATTACAGTGCGACAGATATTTATTTATTTATTATTATTTTTTTCAGCATTTGAAAATAGTGAAAGAGAATTGAGAATTTATCTTCGGCAGCACATTTTACCTTTTGTATTACATTTGCAGCACAATTTCTAAAATAATTTCATCTATGTCATATTAATTTCTATCAATGATAAAACTCAACTAGTGATCGAACTTAATTTGAAATTCTATCGCTAGTAGAAAATTCAAGTAGTGATAGAAAAAGTCTTCCATTGATTAAATTCTATCACTAATAGAATTCAGCTAGTGATAGAATTCAATTTGAATTTTTTGCAGATGAATTAGTTTTGATTTTATGCTATAGATGAAAATATTTTGTCTTTTTTTGTTATACATGCAAAATCCCCAAGAGAATTCATACCTTTTTTTTAATAAAGATGAGCAAAATGAAAGGAAAATCGATAAAATAAAGAAAATTTAGCATAGCCACATATTTTAACTCTTGTATTATATTTAAAGCAGAATTTTAAAAATAATTTATTTATAGTACATTGATTTTTAATTAAAATTTTCTAACAATAATAAAAGTAATAGAATGATTGAATTCTATCACTAATAGAACTCAACTAGTGATAAAACTCCATTTGAATTATCTATTACAAATGAATTAATTTTGATTTTTGTACTATGATTTTTTTGTCATACATGCAAAATGGTCGTGGATAAATGAAGCGAGAGAATTTCAGGAGGCTTGTTATAGAACTGGGCTTAGGGTATGGGCTTTTTCTAAGGTGTTTAGGCCCATATACAAATAAACAGGTTCTGTTATTTTATTTTCGGTGACAGAGGGTGGGGCGAGCAGGAGCCAATGGACGGCGGCCATGGAGCGGCCATCGCAATCATCTTCGAACAATCAGTCAGTCGTTTTAAATTTCTCTTTTCCAGTTTCGTTGTGAAATTCTCAGTGGAATTGATTCCAAGCAAATCTCGATCACAGGCCGATTGGAAAGAGGAATCCGAGCTTCATGGAGATGCTAAAGTCGGCTAAGAGTACATCGCAGGACGAAGAACTAGACGACGACGACGACGACGAATTCGACATCAAGAAAGGTATTATTCTGATTCTTCCAACTTTCTTCGATATTACTGTATTTAACGTTGCGAAATATTTGTGCAGAAGAATTGAGGATTGATGTCGACGGAAACCGCTTCGATCGAAAGGCGAACACTCCTCGATCAAAGCACTCTGTCACAGAACAGCGAAGAAGAAGTAAGATTAACCACAGGCAAGTTTTTCTCCTATTGCTCTAGCCTGTCAGTCCATCAGTGTAGTAAAATGGAACTTGTTTATTTATTATTTACACCTTGATTATTGTCTCGGAACATACAACCCGAGCATCATGGATTCATTTAACGACCAAGAGAGTTTTGAAAAATCTAAAAATGATGTGTTCAATCAATCCATGGTGACCACCTACTCTAAACCCGATACTCACGAATATTAAAAAAAGTGAGAAACCTATAAGATTAGTTAAATTCAAAAAATAATTACAAATATGATTACTTTTAAACAAATTTAACGATCATAATCATAAATATTAATAATACATAGTACTGTAATAATACATCTACTATGAGGTTACGGATACAATATTGAACCATATTTATGACTATGAATGTAAATATTTTCAAATTTGAACGCGTTAGAATAGACCATCTTTTACAATTTTCCTAAAGTAATATCTGAAAAAAAACATACCCTTGCAAGTGCCAGTAAGAATTTTTTACTGTATAGCATTTTTTACTGCCTATCATACATCATACAGGTTTCAAATGCTTAGAGACGTTATTCCTCAAAGCGACCAAAAGAGGGACAAGGCATCTTTCTTATTAGAGGTACACTTTTTTCTTTTTTCCCTTTACTTTTCATTGTTATATTTTATTGGTCAATAACGTGCTTTGCTAAAAATATATTTTTGCAGGTGGTTGAGTACATTAAATTCTTACAGGAAAAGGTACAGAACTATGAAGGTTCATACCAGGTAATCACCTGTTTTATGTTTGAATTTTTCTGTCAAATGAATCTCTATGTGGCATTGAATTAAAGCCATAAACTATATAGTAAATATCACCTTTGATTGTGCAGAGAATCAATCAACGGAGTGCAAAATTTGTAGAGAAAAATGCTCCTTCATCATCTTCACTTGTTCCTGGGAGTTCACATTATGCAGACGATTCGAACACAAATTCTGCAACAACCTTGAACGCAGTTGATCCCCAACCCGGAAGTATAAATAATGCGGTACCATTTCCCTTGAATGCAGTCGATTCCGAGGCTGGATATTTCGACAGCGATGTTGCTGTTGCAAGTGAAATACAGAAAGAACAAGATTTGACCATTGAAGGGGGTACCATCAATATCTCAAGTGTATATTCTCAAGGGTGAGCTTTTGAAGTTTCTATCAGCTTGATCTTTGATTACTTTGTTCTTTAGGGGTAGAAATATAAATTTGATCATAGAATTTAGTCAAGTATTCGTGATTTGAGAGAAAATTAGAATTTAGTCTCTATGGTGGTCTGATAAAACCTAAAAAATAGTCTATGTTGCTCGTAATCACTGACGAATTTAGTATCCAGAGCTAACTATTCATGTGTAAATAATGTAATTTTTTTGTCCAATCAATTTTTTTTTAAAACCGGAAAATCAGACTTTCGCTCCCCTATATCCGGGGCACCATTGGTTCGTCCCAAGATTGTGACACCGAGATACTTCGAAGAGAATTCTAGTTTAAGCATTTTTCAGTGATCTCGAACCAACGATCTTTCAAGGAAGCATGGCTTGAAGTCCTTAGCCTCAACTGCTGAGCTGCTCCCTGGGGACATGTTCTTATTCAATTTAAAAACAGCAGTTTGCGAATTGAAATGACTAATCAATTACACGTGTTTTCTTCGGCTAGCAGGTTATTAAATACTCTCACTCACGCACTACACAGTCTTGGAGTGGATCTATCACAGGCCAGAATCTCTGTGCAAATAGAACTCGGCAAACAAGCAAACAGGAGAGCCACAGCTCCAACATCTATTGATAAGGTATTCTGATGCTATGACCTTTTATTACTAATCATGTATATGATCTCTTGCAATTAGAACAAATAATTGTGTTATTATAGGATTGCTAAATTGTTTTCATTATTCCAAGGATGTCGACACTCCCATAAACGATGCGAAAACGATAGACTCTAGAGTTTTGGCTGCCGAGGATTCTGAGAGGGCCACAAAGAAGCTCAATACTTTCAAAAGCTAGTGTGAGAATTTCGGTCTTTTTGTGATTGTTCATAATTTTATTCATTTTTTTGGGGACTCTTCTCCCCTGTTTGGGTGTTACCATGTGTCTTTCCACTGGTTTCAAAACTACACAATTATCCAAAATTCATGATGTCTAGTTTAATTCATTTTGTTAGGGGATACCCTGCACAATGATATGTAACCTTAACCTAAATTCTTCTTTCTATTGCTTTAATTGAGGCTTCCATCCTAATATTGAGAAGCTGCTTTTTTTCTTTTTCTCTTAATTTGAAGTTTTTTAGCTATGTATATTATTACTGTTTTTTTATTAATATAACGGCTTCCATCCTTCAATTTATTTATTATATATATATATATACATCCTTTCATTTCATTTTTAACTGCTTATGAAGTCCACTAATATCTCGCATTCAGAAGGCAACTTGGTTGGCCAAGGCTTAGTCTTAGATTTCTGCTACTTTAAAATCTATTTTTTAGCATACAACATTACAATATCTCCTACAAGGTTAGGAACGGGAAAGATACCCTTTTTTGGGAAGATGTCTGGAGGGATGAGACTCCATTGGCAATTAATTATCCGCTCATCCATTCCTTATCAAGAAAAAAGGGATGTGTGGTGAGCTCCATGTGGAATCAGGGACAGTCGGCTTGGGACTTAGGGGCTTAGACGGAATTTGAAGGAAGGGGAAATTGTAGAATATTGTGCTTTATCTTTGCTCCTCAATTCGGTGGCTATAGTTGATGATGATGATTTTGCTGCTTGGAGGGCAGATCCCTCTAAATCCTTTTCTGTGAATTCTATGGTGAAAGTTTTGTCCTCCAGATGGCCACCCTCCCAATCTCTATGAGCCAATTTGGAAAGGAAAATATCCTAAGAAGATCAAATTTTTTATGTGGGAATTATCGCATGGTGCTTTAATGACAAATGATAAGCTCCAAAGGAGGCTTATGCATAGAGCCTTGTCTCCGCAATGGTGTTCTATTTGTAGAAATGATTCTGAATCCACTCTCCACCTATTTAGCAAGTGCACATATGCTACAAGATTTTGGAACTTTATCAGAGACGCTTTCAATTGGCCGATTACTCTGCAGCCGGATCCATTTTCATTATTATCAATTACTCTTATGGGCCACCCATTCAAGAAGGAGAAGAAATTATTATGGGAGCACTTTATCAGAACCTTTTGTTGGAATATATGGCTTGAGAGAAACAGAAGAATCTTTAAGGATATAGGCTCTACTTTTGATAGTTTTTTGGACACCATCACCT

mRNA sequence

TATCAAGATTGAATTTCACAAACAAAAGTTTTAGATCCAAATCAATTCTCTGTCCTTTTACCCTCGCAGATTTCGAGCTTCTGATCAACTCCGGCCATTAACAAAGATAAAGTTGCAGAGTCGAACTCCATTATCGTTCTGCCAAAGCTCACCGCGCCGGAACTGTATTCGACTCGATCTCTTGAATTTCGTCGCAATTGGCGGAGAATTCTCGGTAGAACGATTCATCCGGATTGAAGAATTGACAAATTAGAATAACAAAGATAAAGTTGCAGAATCAAACTCCATTATCGTTCTCCCAAAGCTCTCCGGCGCCGGAACTGTATCCGATTCGGGAATTCTCGGTCGAAATCGTCAATTCTTTCGGAATTCAATGATCGGAAGCGATTTTCTCGAGAAACAACCAGAGAATTGAAGAATCGCGCCAATTCGGGTATTAGAAAACCTAGCTGAGTCGTACAGAGATTTGTGAACGTTTTCTAAGGCTGGTGTGGATCTAAGAATTGATTCCAGAATTTTCTTGATCTTTTTCGCTCTAGAACTCCTCAATCGAGCTCTGAATTTCCAATAGCTGAATCAAAATTCCGTGAGGATTCATTTTCCTGTTGATTGTGAATTCCAAATTTGGCGAAAATTGCGATGGAACTTCCTCAATCTCGTCCGTTTGGAGCCGATCAAGGAAGCAAATCAACACACGACTTCCTCTCTCTGTACACACATTCAAGTCCACAGCAAGATCCAAGACCATCCCCACAAGGTGGTTATCTGAAGACACACAATTTCCTGCAACCACACGAGCGAAAAAGGAAGGTCATTACCAAGGAAGAGACAGATGGAGAGAGGCCACCACCACCACCAGTGCCACCGCCTTGGCCTTCCATTGAGAATTTTCTCACAAGAGGGATTGAGACTTACAGTATAAGCCACGTTTCGTATTTCAATCAGAGGTTTCAGCCGAAGCCAGAAGGATTGGTTTTCGCTGGTGCTCAATCGAGTAGCAGCACTGTCGAGAGAAACAATGAGAATTCCAATGCCGCTTCTTTCACCACGCCCGAAAATAAACTCACTCAGACAGAAGAACGTGCAGTCAAAAAGGGAAAGACAGGGATGGAGAATACTGTGAGAGACAGGCCTTATGAGGGTGGGGCGAGCAGGAGCCAATGGACGGCGGCCATGGAGCGGCCATCGCAATCATCTTCGAACAATCAGCCGATTGGAAAGAGGAATCCGAGCTTCATGGAGATGCTAAAGTCGGCTAAGAGTACATCGCAGGACGAAGAACTAGACGACGACGACGACGACGAATTCGACATCAAGAAAGAAGAATTGAGGATTGATGTCGACGGAAACCGCTTCGATCGAAAGGCGAACACTCCTCGATCAAAGCACTCTGTCACAGAACAGCGAAGAAGAAGTAAGATTAACCACAGGTTTCAAATGCTTAGAGACGTTATTCCTCAAAGCGACCAAAAGAGGGACAAGGCATCTTTCTTATTAGAGGTGGTTGAGTACATTAAATTCTTACAGGAAAAGGTACAGAACTATGAAGGTTCATACCAGAGAATCAATCAACGGAGTGCAAAATTTGTAGAGAAAAATGCTCCTTCATCATCTTCACTTGTTCCTGGGAGTTCACATTATGCAGACGATTCGAACACAAATTCTGCAACAACCTTGAACGCAGTTGATCCCCAACCCGGAAGTATAAATAATGCGGTACCATTTCCCTTGAATGCAGTCGATTCCGAGGCTGGATATTTCGACAGCGATGTTGCTGTTGCAAGTGAAATACAGAAAGAACAAGATTTGACCATTGAAGGGGGTACCATCAATATCTCAAGTGTATATTCTCAAGGGTTATTAAATACTCTCACTCACGCACTACACAGTCTTGGAGTGGATCTATCACAGGCCAGAATCTCTGTGCAAATAGAACTCGGCAAACAAGCAAACAGGAGAGCCACAGCTCCAACATCTATTGATAAGGATGTCGACACTCCCATAAACGATGCGAAAACGATAGACTCTAGAGTTTTGGCTGCCGAGGATTCTGAGAGGGCCACAAAGAAGCTCAATACTTTCAAAAGCTAGTGTGAGAATTTCGGTCTTTTTGTGATTGTTCATAATTTTATTCATTTTTTTGGGGACTCTTCTCCCCTGTTTGGGTGTTACCATGTGTCTTTCCACTGGTTTCAAAACTACACAATTATCCAAAATTCATGATGTCTAGTTTAATTCATTTTGTTAGGGGATACCCTGCACAATGATATGTAACCTTAACCTAAATTCTTCTTTCTATTGCTTTAATTGAGGCTTCCATCCTAATATTGAGAAGCTGCTTTTTTTCTTTTTCTCTTAATTTGAAGTTTTTTAGCTATGTATATTATTACTGTTTTTTTATTAATATAACGGCTTCCATCCTTCAATTTATTTATTATATATATATATATACATCCTTTCATTTCATTTTTAACTGCTTATGAAGTCCACTAATATCTCGCATTCAGAAGGCAACTTGGTTGGCCAAGGCTTAGTCTTAGATTTCTGCTACTTTAAAATCTATTTTTTAGCATACAACATTACAATATCTCCTACAAGGTTAGGAACGGGAAAGATACCCTTTTTTGGGAAGATGTCTGGAGGGATGAGACTCCATTGGCAATTAATTATCCGCTCATCCATTCCTTATCAAGAAAAAAGGGATGTGTGGTGAGCTCCATGTGGAATCAGGGACAGTCGGCTTGGGACTTAGGGGCTTAGACGGAATTTGAAGGAAGGGGAAATTGTAGAATATTGTGCTTTATCTTTGCTCCTCAATTCGGTGGCTATAGTTGATGATGATGATTTTGCTGCTTGGAGGGCAGATCCCTCTAAATCCTTTTCTGTGAATTCTATGGTGAAAGTTTTGTCCTCCAGATGGCCACCCTCCCAATCTCTATGAGCCAATTTGGAAAGGAAAATATCCTAAGAAGATCAAATTTTTTATGTGGGAATTATCGCATGGTGCTTTAATGACAAATGATAAGCTCCAAAGGAGGCTTATGCATAGAGCCTTGTCTCCGCAATGGTGTTCTATTTGTAGAAATGATTCTGAATCCACTCTCCACCTATTTAGCAAGTGCACATATGCTACAAGATTTTGGAACTTTATCAGAGACGCTTTCAATTGGCCGATTACTCTGCAGCCGGATCCATTTTCATTATTATCAATTACTCTTATGGGCCACCCATTCAAGAAGGAGAAGAAATTATTATGGGAGCACTTTATCAGAACCTTTTGTTGGAATATATGGCTTGAGAGAAACAGAAGAATCTTTAAGGATATAGGCTCTACTTTTGATAGTTTTTTGGACACCATCACCT

Coding sequence (CDS)

ATGGAACTTCCTCAATCTCGTCCGTTTGGAGCCGATCAAGGAAGCAAATCAACACACGACTTCCTCTCTCTGTACACACATTCAAGTCCACAGCAAGATCCAAGACCATCCCCACAAGGTGGTTATCTGAAGACACACAATTTCCTGCAACCACACGAGCGAAAAAGGAAGGTCATTACCAAGGAAGAGACAGATGGAGAGAGGCCACCACCACCACCAGTGCCACCGCCTTGGCCTTCCATTGAGAATTTTCTCACAAGAGGGATTGAGACTTACAGTATAAGCCACGTTTCGTATTTCAATCAGAGGTTTCAGCCGAAGCCAGAAGGATTGGTTTTCGCTGGTGCTCAATCGAGTAGCAGCACTGTCGAGAGAAACAATGAGAATTCCAATGCCGCTTCTTTCACCACGCCCGAAAATAAACTCACTCAGACAGAAGAACGTGCAGTCAAAAAGGGAAAGACAGGGATGGAGAATACTGTGAGAGACAGGCCTTATGAGGGTGGGGCGAGCAGGAGCCAATGGACGGCGGCCATGGAGCGGCCATCGCAATCATCTTCGAACAATCAGCCGATTGGAAAGAGGAATCCGAGCTTCATGGAGATGCTAAAGTCGGCTAAGAGTACATCGCAGGACGAAGAACTAGACGACGACGACGACGACGAATTCGACATCAAGAAAGAAGAATTGAGGATTGATGTCGACGGAAACCGCTTCGATCGAAAGGCGAACACTCCTCGATCAAAGCACTCTGTCACAGAACAGCGAAGAAGAAGTAAGATTAACCACAGGTTTCAAATGCTTAGAGACGTTATTCCTCAAAGCGACCAAAAGAGGGACAAGGCATCTTTCTTATTAGAGGTGGTTGAGTACATTAAATTCTTACAGGAAAAGGTACAGAACTATGAAGGTTCATACCAGAGAATCAATCAACGGAGTGCAAAATTTGTAGAGAAAAATGCTCCTTCATCATCTTCACTTGTTCCTGGGAGTTCACATTATGCAGACGATTCGAACACAAATTCTGCAACAACCTTGAACGCAGTTGATCCCCAACCCGGAAGTATAAATAATGCGGTACCATTTCCCTTGAATGCAGTCGATTCCGAGGCTGGATATTTCGACAGCGATGTTGCTGTTGCAAGTGAAATACAGAAAGAACAAGATTTGACCATTGAAGGGGGTACCATCAATATCTCAAGTGTATATTCTCAAGGGTTATTAAATACTCTCACTCACGCACTACACAGTCTTGGAGTGGATCTATCACAGGCCAGAATCTCTGTGCAAATAGAACTCGGCAAACAAGCAAACAGGAGAGCCACAGCTCCAACATCTATTGATAAGGATGTCGACACTCCCATAAACGATGCGAAAACGATAGACTCTAGAGTTTTGGCTGCCGAGGATTCTGAGAGGGCCACAAAGAAGCTCAATACTTTCAAAAGCTAG

Protein sequence

MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVITKEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSSSTVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAMERPSQSSSNNQPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKEELRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPLNAVDSEAGYFDSDVAVASEIQKEQDLTIEGGTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTPINDAKTIDSRVLAAEDSERATKKLNTFKS

Homology

[Close]

BLAST of Sed0006842 vs. NCBI nr
Match: XP_023531621.1 (transcription factor BIM1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 568.5 bits (1464), Expect = 5.3e-158
Identity = 358/569 (62.92%), Postives = 395/569 (69.42%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPRPS QGGYLKTH+FL+P ERKRK  +
Sbjct: 1   MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRPSSQGGYLKTHDFLEPQERKRKASS 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSS 120
           K+E + ER PPPPVPP   S+E+FL  GI T+SIS VSYF+QR  PKPEG VF GA+SSS
Sbjct: 61  KKEINVER-PPPPVPP--TSVEHFLPGGIGTFSISQVSYFDQRTLPKPEGSVFTGARSSS 120

Query: 121 STVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAME 180
           S  ERN+ENSN + FT         EE AVKKGKTG EN + DRP+E  AS SQWTA+ME
Sbjct: 121 SG-ERNDENSNGSGFTL-------WEECAVKKGKTGKENILGDRPHEPRASTSQWTASME 180

Query: 181 RPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKE- 240
           RPSQSSSNN           QP GK+NPSFMEMLKSAKS SQDEELDDD D  F IKKE 
Sbjct: 181 RPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQDEELDDDGD--FVIKKEI 240

Query: 241 ------ELRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKA 300
                 ELRI VDGN  D+KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQK+DKA
Sbjct: 241 STANKGELRIKVDGNSSDQKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKKDKA 300

Query: 301 SFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQR------------------ 360
           SFLLEVVEYI+FLQEKVQ YEGSY             R NQR                  
Sbjct: 301 SFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRNNQRSADGYNDQSRGVDNGPGP 360

Query: 361 ----SAKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPLN--- 420
               SA FVEKNAP  S LVPGSSH A DS+T+SATTL AVD  PG  NN VPFP++   
Sbjct: 361 ALVFSANFVEKNAP-LSPLVPGSSHNAVDSDTSSATTLKAVDHHPGRTNNVVPFPMSIPP 420

Query: 421 -------------------------------AVDSEAGYFDSDVAVASEIQKEQDLTIEG 480
                                           +  +A  +++D AVASE+QKEQDLTIEG
Sbjct: 421 KLYAPTRDGSVVPQASKPLSSDTDHPSSQSQILSYQARCYNNDAAVASELQKEQDLTIEG 480

Query: 481 GTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTP 484
           GT+NISSVYSQGLLNTLTHAL   GVDLSQARISVQIELG+ ANRR TAP+SI KD + P
Sbjct: 481 GTVNISSVYSQGLLNTLTHALQRSGVDLSQARISVQIELGELANRRVTAPSSIVKDNNIP 540

[Close]

BLAST of Sed0006842 vs. NCBI nr
Match: XP_023516932.1 (transcription factor BIM1-like [Cucurbita pepo subsp. pepo] >XP_023516933.1 transcription factor BIM1-like [Cucurbita pepo subsp. pepo] >XP_023516934.1 transcription factor BIM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.1 bits (1455), Expect = 5.9e-157
Identity = 356/569 (62.57%), Postives = 385/569 (67.66%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPRPS QGGYLKTH+FLQP ER RK  T
Sbjct: 1   MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRPSQQGGYLKTHDFLQPQERIRKGST 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSS 120
           KEE D E PPPP  P   PS+E+ L  GI TYSISHVSY +QR  PKPEG VF GA+SSS
Sbjct: 61  KEEADVETPPPPAPP---PSVEHVLPGGIGTYSISHVSYLDQRVLPKPEGSVFTGARSSS 120

Query: 121 STVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAME 180
           S  ERN+ENSN +SF    +  T  EE A KKGKTG EN V DRP+E  AS SQWTA+++
Sbjct: 121 S-AERNDENSNGSSFAAGGSGFTLWEECASKKGKTGKENIVGDRPHEPRASASQWTASVD 180

Query: 181 RPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKEE 240
           RPSQSSSNN           QP G +NP+FMEMLKSAKSTSQDEELDDD D  F IKKE 
Sbjct: 181 RPSQSSSNNHHNAFCCLSSSQPTGTKNPTFMEMLKSAKSTSQDEELDDDGD--FVIKKET 240

Query: 241 -------LRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKA 300
                  LRI VDGN  D+KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQKRDKA
Sbjct: 241 STANKGGLRIKVDGNSSDQKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKRDKA 300

Query: 301 SFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQRS----------------- 360
           SFLLEVV+YI+FLQEKVQ YEGSYQ            R NQRS                 
Sbjct: 301 SFLLEVVDYIQFLQEKVQKYEGSYQEWNREMAKLVPLRNNQRSADVYNDQSRGMSSGSVP 360

Query: 361 -----AKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPL---- 420
                AKFVEKN P  S +VPGSSH   DS+T SA+TL AVD   G  +NA+PFP     
Sbjct: 361 ALVLAAKFVEKNTP-LSPIVPGSSHNVVDSDTGSASTLKAVDRHSGRTSNALPFPTIVPP 420

Query: 421 ------------------------------NAVDSEAGYFDSDVAVASEIQKEQDLTIEG 480
                                              EA   +SDVAVASE+QKEQDLTIEG
Sbjct: 421 KLYASTRDGSVVPQHPKQFASETDHPSLRPQIRSCEARCHNSDVAVASEMQKEQDLTIEG 480

Query: 481 GTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTP 484
           GTINISSVYSQGLLNTLTHAL S GVDLSQARISVQIELGK+A RRA +PTSIDKDVD P
Sbjct: 481 GTINISSVYSQGLLNTLTHALQSSGVDLSQARISVQIELGKRATRRAVSPTSIDKDVDIP 540

[Close]

BLAST of Sed0006842 vs. NCBI nr
Match: XP_022921452.1 (transcription factor BIM1-like [Cucurbita moschata] >XP_022921453.1 transcription factor BIM1-like [Cucurbita moschata])

HSP 1 Score: 564.7 bits (1454), Expect = 7.7e-157
Identity = 357/569 (62.74%), Postives = 386/569 (67.84%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPRPS QGGYLKTH+FLQP ER RK  T
Sbjct: 1   MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRPSQQGGYLKTHDFLQPQERIRKGST 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSS 120
           KEETD E PPPP  P   PS+E+ L  GI TYSISHVSY +QR  PKPEG VF GA+SSS
Sbjct: 61  KEETDVETPPPPAPP---PSVEHVLPGGIGTYSISHVSYLDQRVLPKPEGSVFTGARSSS 120

Query: 121 STVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAME 180
           S  ERN+ENSN +SF    +  T  EE A KKGKTG EN V DRP+E  AS SQWTA++E
Sbjct: 121 S-AERNDENSNGSSFAGAGSGFTLWEECASKKGKTGKENIVGDRPHEPRASASQWTASVE 180

Query: 181 RPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKEE 240
           RPSQSSSNN           QP G +NP+FMEMLKSAKSTSQDEELDDD D  F IKKE 
Sbjct: 181 RPSQSSSNNHHNAFSCLSSSQPTGTKNPTFMEMLKSAKSTSQDEELDDDGD--FVIKKET 240

Query: 241 -------LRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKA 300
                  LRI VDGN  D+KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQKRDKA
Sbjct: 241 STANKGGLRIKVDGNSSDQKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKRDKA 300

Query: 301 SFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQRS----------------- 360
           SFLLEVV+YI+FLQEKVQ YEGSYQ            R NQRS                 
Sbjct: 301 SFLLEVVDYIQFLQEKVQKYEGSYQEWNREMAKLVPLRNNQRSADVYNDQSRGMSSGSVP 360

Query: 361 -----AKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPL---- 420
                AKFVEKN P  S +VPGSSH   DS+T SA+TL AVD   G  +NA+PFP     
Sbjct: 361 ALVLAAKFVEKNTP-LSPIVPGSSHNVVDSDTGSASTLKAVDRHSGRTSNALPFPTIVPP 420

Query: 421 ------------------------------NAVDSEAGYFDSDVAVASEIQKEQDLTIEG 480
                                              EA   +SDVAVASE+QKEQDLTIEG
Sbjct: 421 KLYASTRDGSVVPQHPKQFASEKDHPSLRPQIRSCEARCHNSDVAVASEMQKEQDLTIEG 480

Query: 481 GTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTP 484
           GTINISSVYSQGLLNTLTHAL S GVDLSQ+RISVQIELGK+A RRA +PTSI KDVD P
Sbjct: 481 GTINISSVYSQGLLNTLTHALQSSGVDLSQSRISVQIELGKRATRRAVSPTSIVKDVDIP 540

[Close]

BLAST of Sed0006842 vs. NCBI nr
Match: XP_022987923.1 (transcription factor BIM1-like [Cucurbita maxima] >XP_022987924.1 transcription factor BIM1-like [Cucurbita maxima])

HSP 1 Score: 563.5 bits (1451), Expect = 1.7e-156
Identity = 357/569 (62.74%), Postives = 384/569 (67.49%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPRPS QGGYLKTH+FLQP ER RK  T
Sbjct: 1   MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRPSQQGGYLKTHDFLQPQERIRKGST 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSS 120
           KEETD E PPPP  P   PS+E+ L  GI TYSISHVSY +QR  PKPEG VF GA+SSS
Sbjct: 61  KEETDVETPPPPAPP---PSVEHVLPGGIGTYSISHVSYLDQRVLPKPEGSVFTGARSSS 120

Query: 121 STVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAME 180
           S  ERN+ENSN + F    +     EE A KKGKTG EN V DRP+E  AS SQWTA++E
Sbjct: 121 SG-ERNDENSNGSCFAAAGSGFALWEECASKKGKTGKENIVGDRPHEPRASASQWTASVE 180

Query: 181 RPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKEE 240
           RPSQSSSNN           QP G +NPSFMEMLKSAKSTSQDEELDDD D  F IKKE 
Sbjct: 181 RPSQSSSNNHHNAFSCLSSSQPTGTKNPSFMEMLKSAKSTSQDEELDDDGD--FVIKKET 240

Query: 241 -------LRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKA 300
                  LRI VDGN  D+KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQKRDKA
Sbjct: 241 STANKGGLRIKVDGNSSDQKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKRDKA 300

Query: 301 SFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQRS----------------- 360
           SFLLEVV+YI+FLQEKVQ YEGSYQ            R NQRS                 
Sbjct: 301 SFLLEVVDYIQFLQEKVQKYEGSYQEWNREMAKLVPLRNNQRSVDVYNDQSRGMSSGSVP 360

Query: 361 -----AKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPLNAV- 420
                AKFVEKN P  S +VPGSSH   DS+T SA+TL AVD   G  +NA+PFP     
Sbjct: 361 ALVLAAKFVEKNTP-LSPIVPGSSHNVVDSDTGSASTLKAVDRHSGRTSNALPFPTTVPP 420

Query: 421 ---------------------------------DSEAGYFDSDVAVASEIQKEQDLTIEG 480
                                              EA   +SDVAVASE+QKEQDLTIEG
Sbjct: 421 KLYASTRDGSVVPQHPKQFASETDHPSLRPQNRSCEARCHNSDVAVASEMQKEQDLTIEG 480

Query: 481 GTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTP 484
           GTINISSVYSQGLLNTLTHAL S GVDLSQARISVQIELGK+A RRA +PTSI KDVD P
Sbjct: 481 GTINISSVYSQGLLNTLTHALQSSGVDLSQARISVQIELGKRATRRAVSPTSIVKDVDIP 540

[Close]

BLAST of Sed0006842 vs. NCBI nr
Match: KAG6589583.1 (Transcription factor BIM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 563.1 bits (1450), Expect = 2.2e-156
Identity = 356/569 (62.57%), Postives = 385/569 (67.66%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPRPS QGGYLKTH+FLQP ER RK  T
Sbjct: 71  MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRPSQQGGYLKTHDFLQPQERIRKGST 130

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSS 120
           KEETD E PPPP  P   PS+E+ L  GI TYSISHVSY +QR  PKPEG VF GA+SSS
Sbjct: 131 KEETDVETPPPPAPP---PSVEHVLPGGIGTYSISHVSYLDQRVLPKPEGSVFTGARSSS 190

Query: 121 STVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAME 180
           S  ERN+ENSN +SF    +  T  EE A KKGKTG EN V DRP+E  AS SQWTA++E
Sbjct: 191 S-AERNDENSNGSSFAAAGSGFTLWEECASKKGKTGKENIVGDRPHEPRASASQWTASVE 250

Query: 181 RPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKEE 240
           RPSQSSSNN           QP G +NP+FMEMLKSAKSTSQDEELDDD D  F IKKE 
Sbjct: 251 RPSQSSSNNHHNAFSCLSSSQPTGTKNPTFMEMLKSAKSTSQDEELDDDGD--FVIKKET 310

Query: 241 -------LRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKA 300
                  LRI VDGN  D+KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQKRDKA
Sbjct: 311 STANKGGLRIKVDGNSSDQKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKRDKA 370

Query: 301 SFLLEVVEYIKFLQEKVQNYEGSYQRIN------------QRS----------------- 360
           SFLLEVV+YI+FLQEKVQ YEGSYQ  N            QRS                 
Sbjct: 371 SFLLEVVDYIQFLQEKVQKYEGSYQEWNREMAKLVPLRNKQRSADVYNDQSRGMSSGSVP 430

Query: 361 -----AKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPL---- 420
                AKFVEKN P  S +VPGSSH   DS+T SA+TL AVD   G  +NA+PFP     
Sbjct: 431 ALVLAAKFVEKNTP-FSPIVPGSSHNVVDSDTGSASTLKAVDCHSGRTSNALPFPTIVPP 490

Query: 421 ------------------------------NAVDSEAGYFDSDVAVASEIQKEQDLTIEG 480
                                              EA   +SDVAVASE+QKEQDLTIEG
Sbjct: 491 KLYASTRDGSVVPQHPKQFASEKDHPSLRPQIRSCEARCHNSDVAVASEMQKEQDLTIEG 550

Query: 481 GTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTP 484
           GTINISSVYSQGLLNTLTHAL S GVDLSQ+RISVQIELGK+A RRA +PTSI KDVD P
Sbjct: 551 GTINISSVYSQGLLNTLTHALQSSGVDLSQSRISVQIELGKRATRRAVSPTSIVKDVDIP 610

[Close]

BLAST of Sed0006842 vs. ExPASy Swiss-Prot
Match: Q9LEZ3 (Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2)

HSP 1 Score: 275.0 bits (702), Expect = 1.6e-72
Identity = 220/522 (42.15%), Postives = 292/522 (55.94%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSP----QGGYLKTHNFLQPHE--- 60
           MELPQ RPF   QG K THDFLSL +HS+   DP+P+P    QG +LKTH+FLQP E   
Sbjct: 1   MELPQPRPF-KTQGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLECVG 60

Query: 61  RKRKV--ITKEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQ--PKPE 120
            K  V  I    T  E+PPPP  PPP   +++ L  GI TY+IS + YF+   Q  PKPE
Sbjct: 61  AKEDVSRINSTTTASEKPPPPAPPPP---LQHVLPGGIGTYTISPIPYFHHHHQRIPKPE 120

Query: 121 GLVFAGAQSSSSTVERNNENSNAASFTTPENKLTQTEERAV-KKGKTGMENTVRDR---P 180
                   ++   V   N NSN +S+    +  T  +E A  KKG+T  EN+V +R    
Sbjct: 121 LSPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMR 180

Query: 181 YEGGASRSQWTAAMERPSQSSSNNQPIG-----------KRNPSFMEMLKSAKSTSQDEE 240
            +  A+  QW  A ER SQS +NN   G            ++ SFM+M++SAK +SQ+++
Sbjct: 181 ADVAATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDD 240

Query: 241 LDDDDDDEFDIKKE----------ELRI--DVDGNRFDRKANTPRSKHSVTEQRRRSKIN 300
           LDD++D  F +KKE          +LR+  DV G+  D+K NTPRSKHS TEQRRRSKIN
Sbjct: 241 LDDEED--FIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKIN 300

Query: 301 HRFQMLRDVIPQSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFVEKNAP 360
            RFQMLR +IP SDQKRDKASFLLEV+EYI+FLQEK   Y  SYQ  N   AK +   + 
Sbjct: 301 DRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSN 360

Query: 361 SSSSLVPGSSHYA---DDSNTN-----SATTLNAVDPQPGSINNAVPFPLNAVDSE---- 420
           ++  LVP    +A   ++   N      AT    V   P +   + PFPL+   +     
Sbjct: 361 NNQQLVPEGVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTS-PFPLSIQSNSFFSP 420

Query: 421 --AG----YFDSDVAVASEIQ---------KEQDLTIEGGTINISSVYSQGLLNTLTHAL 458
             AG     F + VA +  ++         +E+D  +  G I ISSVYSQGL+ TL  AL
Sbjct: 421 VIAGNPVPQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREAL 480

[Close]

BLAST of Sed0006842 vs. ExPASy Swiss-Prot
Match: Q9CAA4 (Transcription factor BIM2 OS=Arabidopsis thaliana OX=3702 GN=BIM2 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.5e-33
Identity = 117/310 (37.74%), Postives = 171/310 (55.16%), Query Frame = 0


Query: 212 DEELDDDDDDEFDIKKE--ELRIDVDGNRFDR---KANTPRSKHSVTEQRRRSKINHRFQ 271
           ++E +D  +++F+ K+E       V  NR  +   KA+  RSKHSVTEQRRRSKIN RFQ
Sbjct: 7   NQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQ 66

Query: 272 MLRDVIPQSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFV--------- 331
           +LR++IP S+QKRD ASFLLEV++Y+++LQEKVQ YEGSY   +Q   K           
Sbjct: 67  ILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWRNNHWRV 126

Query: 332 ------------------------EKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQP 391
                                   E N  +S+  +        +S+   A T  +++ QP
Sbjct: 127 QSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGISIESQP 186

Query: 392 GSINNAVPFPLNAV--DSEAGYFDSDVAVASEIQKEQDLTIEGGTINISSVYSQGLLNTL 451
              +  +P PL  +    +    +   A +  + +  DL IEGGTI+ISS YS  LL++L
Sbjct: 187 ELDDKGLP-PLQPILPMVQGEQANECPATSDGLGQSNDLVIEGGTISISSAYSHELLSSL 246

Query: 452 THALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTPIN-DAKTIDSRVLAAED 481
           T AL + G+DLSQA++SVQI+LGK+AN+  T      K+   P++ D +  DS V   E+
Sbjct: 247 TQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSKN---PLSYDTQGRDSSV--EEE 306

[Close]

BLAST of Sed0006842 vs. ExPASy Swiss-Prot
Match: Q9FMB6 (Transcription factor BIM3 OS=Arabidopsis thaliana OX=3702 GN=BIM3 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.1e-23
Identity = 107/280 (38.21%), Postives = 141/280 (50.36%), Query Frame = 0


Query: 216 DDDDDDEFDIKKEELRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIP-- 275
           D DD  E D+    L    D +   R  N+ RSKHS TEQRRRSKIN RFQ L D+IP  
Sbjct: 5   DIDDQLEADV-YSNLPSRNDSSTGRRNRNSCRSKHSETEQRRRSKINERFQSLMDIIPQN 64

Query: 276 QSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFV-----------EKNAP 335
           Q+DQKRDKASFLLEV+EYI FLQEKV  YE S+Q   Q   K +           E + P
Sbjct: 65  QNDQKRDKASFLLEVIEYIHFLQEKVHMYEDSHQMWYQSPTKLIPWRNSHGSVAEENDHP 124

Query: 336 ------SSSSLVPGSSHYADDSNTNSATTLNAVDPQ-PGSINNAVP--FPLNAVDSEAGY 395
                 SS+  V  SS +  D       T N+V+P    +++  +P   P++AV S   Y
Sbjct: 125 QIVKSFSSNDKVAASSGFLLD-------TYNSVNPDIDSAVSTKIPEHSPVSAVSS---Y 184

Query: 396 FDSDVAVASEIQKEQDLTIEGGTIN----------------ISSVYSQGLLNTLTHALHS 455
             ++ ++              GTIN                +S+V SQ +LNTLT AL S
Sbjct: 185 LRTEPSLQFVQHDFWQPKTSCGTINCFTNELLTSDEKTSASLSTVCSQRVLNTLTEALKS 244

Query: 456 LGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTPIND 458
            GV++S+  ISVQ+ L K+ +R  +      +D    I D
Sbjct: 245 SGVNMSETMISVQLSLRKREDREYSVAAFASEDNGNSIAD 273

[Close]

BLAST of Sed0006842 vs. ExPASy TrEMBL
Match: A0A6J1E0I1 (transcription factor BIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111429728 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 3.7e-157
Identity = 357/569 (62.74%), Postives = 386/569 (67.84%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPRPS QGGYLKTH+FLQP ER RK  T
Sbjct: 1   MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRPSQQGGYLKTHDFLQPQERIRKGST 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSS 120
           KEETD E PPPP  P   PS+E+ L  GI TYSISHVSY +QR  PKPEG VF GA+SSS
Sbjct: 61  KEETDVETPPPPAPP---PSVEHVLPGGIGTYSISHVSYLDQRVLPKPEGSVFTGARSSS 120

Query: 121 STVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAME 180
           S  ERN+ENSN +SF    +  T  EE A KKGKTG EN V DRP+E  AS SQWTA++E
Sbjct: 121 S-AERNDENSNGSSFAGAGSGFTLWEECASKKGKTGKENIVGDRPHEPRASASQWTASVE 180

Query: 181 RPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKEE 240
           RPSQSSSNN           QP G +NP+FMEMLKSAKSTSQDEELDDD D  F IKKE 
Sbjct: 181 RPSQSSSNNHHNAFSCLSSSQPTGTKNPTFMEMLKSAKSTSQDEELDDDGD--FVIKKET 240

Query: 241 -------LRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKA 300
                  LRI VDGN  D+KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQKRDKA
Sbjct: 241 STANKGGLRIKVDGNSSDQKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKRDKA 300

Query: 301 SFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQRS----------------- 360
           SFLLEVV+YI+FLQEKVQ YEGSYQ            R NQRS                 
Sbjct: 301 SFLLEVVDYIQFLQEKVQKYEGSYQEWNREMAKLVPLRNNQRSADVYNDQSRGMSSGSVP 360

Query: 361 -----AKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPL---- 420
                AKFVEKN P  S +VPGSSH   DS+T SA+TL AVD   G  +NA+PFP     
Sbjct: 361 ALVLAAKFVEKNTP-LSPIVPGSSHNVVDSDTGSASTLKAVDRHSGRTSNALPFPTIVPP 420

Query: 421 ------------------------------NAVDSEAGYFDSDVAVASEIQKEQDLTIEG 480
                                              EA   +SDVAVASE+QKEQDLTIEG
Sbjct: 421 KLYASTRDGSVVPQHPKQFASEKDHPSLRPQIRSCEARCHNSDVAVASEMQKEQDLTIEG 480

Query: 481 GTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTP 484
           GTINISSVYSQGLLNTLTHAL S GVDLSQ+RISVQIELGK+A RRA +PTSI KDVD P
Sbjct: 481 GTINISSVYSQGLLNTLTHALQSSGVDLSQSRISVQIELGKRATRRAVSPTSIVKDVDIP 540

[Close]

BLAST of Sed0006842 vs. ExPASy TrEMBL
Match: A0A6J1JK70 (transcription factor BIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111485331 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 8.3e-157
Identity = 357/569 (62.74%), Postives = 384/569 (67.49%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPRPS QGGYLKTH+FLQP ER RK  T
Sbjct: 1   MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRPSQQGGYLKTHDFLQPQERIRKGST 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSS 120
           KEETD E PPPP  P   PS+E+ L  GI TYSISHVSY +QR  PKPEG VF GA+SSS
Sbjct: 61  KEETDVETPPPPAPP---PSVEHVLPGGIGTYSISHVSYLDQRVLPKPEGSVFTGARSSS 120

Query: 121 STVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAME 180
           S  ERN+ENSN + F    +     EE A KKGKTG EN V DRP+E  AS SQWTA++E
Sbjct: 121 SG-ERNDENSNGSCFAAAGSGFALWEECASKKGKTGKENIVGDRPHEPRASASQWTASVE 180

Query: 181 RPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKEE 240
           RPSQSSSNN           QP G +NPSFMEMLKSAKSTSQDEELDDD D  F IKKE 
Sbjct: 181 RPSQSSSNNHHNAFSCLSSSQPTGTKNPSFMEMLKSAKSTSQDEELDDDGD--FVIKKET 240

Query: 241 -------LRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKA 300
                  LRI VDGN  D+KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQKRDKA
Sbjct: 241 STANKGGLRIKVDGNSSDQKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKRDKA 300

Query: 301 SFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQRS----------------- 360
           SFLLEVV+YI+FLQEKVQ YEGSYQ            R NQRS                 
Sbjct: 301 SFLLEVVDYIQFLQEKVQKYEGSYQEWNREMAKLVPLRNNQRSVDVYNDQSRGMSSGSVP 360

Query: 361 -----AKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPLNAV- 420
                AKFVEKN P  S +VPGSSH   DS+T SA+TL AVD   G  +NA+PFP     
Sbjct: 361 ALVLAAKFVEKNTP-LSPIVPGSSHNVVDSDTGSASTLKAVDRHSGRTSNALPFPTTVPP 420

Query: 421 ---------------------------------DSEAGYFDSDVAVASEIQKEQDLTIEG 480
                                              EA   +SDVAVASE+QKEQDLTIEG
Sbjct: 421 KLYASTRDGSVVPQHPKQFASETDHPSLRPQNRSCEARCHNSDVAVASEMQKEQDLTIEG 480

Query: 481 GTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTP 484
           GTINISSVYSQGLLNTLTHAL S GVDLSQARISVQIELGK+A RRA +PTSI KDVD P
Sbjct: 481 GTINISSVYSQGLLNTLTHALQSSGVDLSQARISVQIELGKRATRRAVSPTSIVKDVDIP 540

[Close]

BLAST of Sed0006842 vs. ExPASy TrEMBL
Match: A0A6J1KJZ4 (transcription factor BIM1 OS=Cucurbita maxima OX=3661 GN=LOC111495290 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.9e-156
Identity = 353/569 (62.04%), Postives = 394/569 (69.24%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPRPS QGGYLKTH+FL+P ERKRK  +
Sbjct: 1   MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRPSSQGGYLKTHDFLEPQERKRKASS 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQPKPEGLVFAGAQSSS 120
           K+E + ERPPP   P P  S+E+FL  GI T+SIS VSYF+QR  PKPEG VF GA+SSS
Sbjct: 61  KKEINVERPPP---PVPTTSVEHFLPGGIGTFSISQVSYFDQRTLPKPEGSVFTGARSSS 120

Query: 121 STVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAME 180
           S  ERN+ENSN + FT         EE AVKKGKTG EN + DRP+E  AS SQWTA+ME
Sbjct: 121 SG-ERNDENSNGSGFTL-------WEEYAVKKGKTGKENILGDRPHEPRASTSQWTASME 180

Query: 181 RPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKE- 240
           RPSQSSSNN           QP GK+NPSFMEMLKSAKS SQDEELDDD D    IKKE 
Sbjct: 181 RPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQDEELDDDGD--VVIKKEI 240

Query: 241 ------ELRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDKA 300
                 ELRI VDGN  D+KANT RSKHS TEQRRRSKIN RFQMLR +IP SDQK+DKA
Sbjct: 241 STANKGELRIKVDGNSSDQKANTSRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKKDKA 300

Query: 301 SFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQR------------------ 360
           SFLLEVVEYI+FLQEKVQ YEGSY             R NQR                  
Sbjct: 301 SFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRNNQRSADGYNDQSRGVDSGPGP 360

Query: 361 ----SAKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPLN--- 420
               SA FVEKNA + S LVPGSSH A DS+T+SATTL AVD  PG  NN VPFP++   
Sbjct: 361 ALVFSANFVEKNA-ALSPLVPGSSHNAVDSDTSSATTLKAVDHHPGRTNNVVPFPMSIPP 420

Query: 421 -------------------------------AVDSEAGYFDSDVAVASEIQKEQDLTIEG 480
                                           +  +A  +++D AVASE+QKEQDLTIEG
Sbjct: 421 KLYAPTRDGTVVPQASRPLSSDTDHPSSQSQILSYQARCYNNDAAVASELQKEQDLTIEG 480

Query: 481 GTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDTP 484
           GT+NISSVYSQGLLN+LTHAL S GVDLSQARISVQIELG+ ANRR+TAP+SI KD++ P
Sbjct: 481 GTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIELGELANRRSTAPSSIVKDINIP 540

[Close]

BLAST of Sed0006842 vs. ExPASy TrEMBL
Match: A0A6J1C0A4 (transcription factor BIM1 OS=Momordica charantia OX=3673 GN=LOC111007188 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 5.4e-156
Identity = 362/570 (63.51%), Postives = 386/570 (67.72%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ R FGA +GSKSTHDFLSLY+HSSPQ DPRPSPQGGYLKTHNFLQP ER RK  T
Sbjct: 1   MELPQPRQFGA-EGSKSTHDFLSLYSHSSPQLDPRPSPQGGYLKTHNFLQPQERIRKGST 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYF-NQRFQPKPEGLVFAGAQSS 120
           KEETD ERPPPP  PP   S+E+ L  GI TYSISHVSYF +QR  PKPEG VF GA+SS
Sbjct: 61  KEETDVERPPPPAPPP--SSVEHLLPGGIGTYSISHVSYFDHQRVLPKPEGSVFTGARSS 120

Query: 121 SSTVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAM 180
           SST ERN+ENSN +SF       T  EE A KKGKTG EN V + P    AS SQWTA+M
Sbjct: 121 SST-ERNDENSNGSSFAAAGCGFTLWEECAAKKGKTGKENLVANEP---RASTSQWTASM 180

Query: 181 ERPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKE 240
           ERPSQSSSNN           QP GK+N SFMEMLKSAKSTSQDEELDDD D  F +KKE
Sbjct: 181 ERPSQSSSNNHHNTFSCHSSSQPTGKKNQSFMEMLKSAKSTSQDEELDDDGD--FVVKKE 240

Query: 241 -------ELRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDK 300
                  ELRI VDG   D KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQKRDK
Sbjct: 241 TSTANKGELRIKVDGQSSDPKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKRDK 300

Query: 301 ASFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQRS---------------- 360
           ASFLLEVVEYI+FLQEKVQ YEGSYQ            R NQRS                
Sbjct: 301 ASFLLEVVEYIQFLQEKVQKYEGSYQEWNHEMAKLMPLRNNQRSADGYNDQSRGINSGSG 360

Query: 361 ------AKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPLN-- 420
                 AK VEKNAP  S +VPGSSH A DS+T+SATTL AVD   G   NAVP P++  
Sbjct: 361 PALVFAAKLVEKNAP-VSPIVPGSSHNAVDSDTSSATTLKAVDHHSGRTYNAVPSPMSMP 420

Query: 421 --------------------------------AVDSEAGYFDSDVAVASEIQKEQDLTIE 480
                                            +  +A  F+SDVAVASE+QKEQDLTIE
Sbjct: 421 PKLYAPTRDGNVVPQPPNQLSSDPEHPSSRPQILSCQARCFNSDVAVASEMQKEQDLTIE 480

Query: 481 GGTINISSVYSQGLLNTLTHALHSLGVDLSQARISVQIELGKQANRRATAPTSIDKDVDT 484
           GGTINISSVYSQGLLNTLTHAL S GVDLSQARISVQIELGK+A R   APTSI KDVD 
Sbjct: 481 GGTINISSVYSQGLLNTLTHALQSSGVDLSQARISVQIELGKRATRTVIAPTSIVKDVDI 540

[Close]

BLAST of Sed0006842 vs. ExPASy TrEMBL
Match: A0A0A0LSI8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015080 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 1.1e-153
Identity = 353/567 (62.26%), Postives = 387/567 (68.25%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSPQGGYLKTHNFLQPHERKRKVIT 60
           MELPQ RPFGA +GSKSTHDFLSLYTHSSPQ DPR +PQG YLKTH+FLQP ER RK  T
Sbjct: 1   MELPQPRPFGA-EGSKSTHDFLSLYTHSSPQLDPRSTPQGSYLKTHDFLQPQERIRKAST 60

Query: 61  KEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQR-FQPKPEGLVFAGAQSS 120
           KEETD ERPPPP  P   PS+E+ L  GI TYSISHVSYF+QR   PKPEG VF G +SS
Sbjct: 61  KEETDVERPPPPAPP---PSVEHILPGGIGTYSISHVSYFDQRVVLPKPEGSVFTGVRSS 120

Query: 121 SSTVERNNENSNAASFTTPENKLTQTEERAVKKGKTGMENTVRDRPYEGGASRSQWTAAM 180
           SS  ERN+ENSN +SF    +  T  EE +VKKGKTG EN V DRP+E  AS SQWTA+M
Sbjct: 121 SS-AERNDENSNCSSFAAAGSGFTLWEESSVKKGKTGKENNVGDRPHEPRASTSQWTASM 180

Query: 181 ERPSQSSSNN-----------QPIGKRNPSFMEMLKSAKSTSQDEELDDDDDDEFDIKKE 240
           ERPSQSSSNN           QP G +NP+FMEMLKSAKSTSQDEELDDD D  F IKKE
Sbjct: 181 ERPSQSSSNNHHNTFSCLSSSQPTGTKNPTFMEMLKSAKSTSQDEELDDDGD--FVIKKE 240

Query: 241 E-------LRIDVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVIPQSDQKRDK 300
                   LRI VDGN  D+KANTPRSKHS TEQRRRSKIN RFQMLR +IP SDQKRDK
Sbjct: 241 TSTANKGGLRIKVDGNSSDQKANTPRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKRDK 300

Query: 301 ASFLLEVVEYIKFLQEKVQNYEGSYQ------------RINQRS---------------- 360
           ASFLLEVVEYI+FLQEKVQ YEGSYQ            R NQRS                
Sbjct: 301 ASFLLEVVEYIQFLQEKVQKYEGSYQEWNHEMAKLVPLRNNQRSADVYNDQSRGINSGSV 360

Query: 361 ------AKFVEKNAPSSSSLVPGSSHYADDSNTNSATTLNAVDPQPGSINNAVPFPL--- 420
                 AKF+EKN+P  S +VPGS+H A DS+T+SA+TL AVD   G  +NAV FP+   
Sbjct: 361 PALVLAAKFIEKNSP-LSPIVPGSAHNAVDSDTSSASTLKAVDHHSGRTSNAVQFPMSIP 420

Query: 421 ----------NAV---------------------DSEAGYFDSDVAVASEIQKEQDLTIE 480
                     N V                       EA  F+SDVAVASE+QKEQDLTIE
Sbjct: 421 PKLSASTRDGNVVPQPPKPLSSGMDHSSLRPEIRSCEARCFNSDVAVASEMQKEQDLTIE 480

[Close]

BLAST of Sed0006842 vs. TAIR 10
Match: AT5G08130.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-73
Identity = 220/522 (42.15%), Postives = 292/522 (55.94%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSP----QGGYLKTHNFLQPHE--- 60
           MELPQ RPF   QG K THDFLSL +HS+   DP+P+P    QG +LKTH+FLQP E   
Sbjct: 1   MELPQPRPF-KTQGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLECVG 60

Query: 61  RKRKV--ITKEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQ--PKPE 120
            K  V  I    T  E+PPPP  PPP   +++ L  GI TY+IS + YF+   Q  PKPE
Sbjct: 61  AKEDVSRINSTTTASEKPPPPAPPPP---LQHVLPGGIGTYTISPIPYFHHHHQRIPKPE 120

Query: 121 GLVFAGAQSSSSTVERNNENSNAASFTTPENKLTQTEERAV-KKGKTGMENTVRDR---P 180
                   ++   V   N NSN +S+    +  T  +E A  KKG+T  EN+V +R    
Sbjct: 121 LSPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMR 180

Query: 181 YEGGASRSQWTAAMERPSQSSSNNQPIG-----------KRNPSFMEMLKSAKSTSQDEE 240
            +  A+  QW  A ER SQS +NN   G            ++ SFM+M++SAK +SQ+++
Sbjct: 181 ADVAATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDD 240

Query: 241 LDDDDDDEFDIKKE----------ELRI--DVDGNRFDRKANTPRSKHSVTEQRRRSKIN 300
           LDD++D  F +KKE          +LR+  DV G+  D+K NTPRSKHS TEQRRRSKIN
Sbjct: 241 LDDEED--FIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKIN 300

Query: 301 HRFQMLRDVIPQSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFVEKNAP 360
            RFQMLR +IP SDQKRDKASFLLEV+EYI+FLQEK   Y  SYQ  N   AK +   + 
Sbjct: 301 DRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSN 360

Query: 361 SSSSLVPGSSHYA---DDSNTN-----SATTLNAVDPQPGSINNAVPFPLNAVDSE---- 420
           ++  LVP    +A   ++   N      AT    V   P +   + PFPL+   +     
Sbjct: 361 NNQQLVPEGVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTS-PFPLSIQSNSFFSP 420

Query: 421 --AG----YFDSDVAVASEIQ---------KEQDLTIEGGTINISSVYSQGLLNTLTHAL 458
             AG     F + VA +  ++         +E+D  +  G I ISSVYSQGL+ TL  AL
Sbjct: 421 VIAGNPVPQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREAL 480

[Close]

BLAST of Sed0006842 vs. TAIR 10
Match: AT5G08130.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-73
Identity = 220/522 (42.15%), Postives = 292/522 (55.94%), Query Frame = 0


Query: 1   MELPQSRPFGADQGSKSTHDFLSLYTHSSPQQDPRPSP----QGGYLKTHNFLQPHE--- 60
           MELPQ RPF   QG K THDFLSL +HS+   DP+P+P    QG +LKTH+FLQP E   
Sbjct: 1   MELPQPRPF-KTQGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLECVG 60

Query: 61  RKRKV--ITKEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQ--PKPE 120
            K  V  I    T  E+PPPP  PPP   +++ L  GI TY+IS + YF+   Q  PKPE
Sbjct: 61  AKEDVSRINSTTTASEKPPPPAPPPP---LQHVLPGGIGTYTISPIPYFHHHHQRIPKPE 120

Query: 121 GLVFAGAQSSSSTVERNNENSNAASFTTPENKLTQTEERAV-KKGKTGMENTVRDR---P 180
                   ++   V   N NSN +S+    +  T  +E A  KKG+T  EN+V +R    
Sbjct: 121 LSPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMR 180

Query: 181 YEGGASRSQWTAAMERPSQSSSNNQPIG-----------KRNPSFMEMLKSAKSTSQDEE 240
            +  A+  QW  A ER SQS +NN   G            ++ SFM+M++SAK +SQ+++
Sbjct: 181 ADVAATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDD 240

Query: 241 LDDDDDDEFDIKKE----------ELRI--DVDGNRFDRKANTPRSKHSVTEQRRRSKIN 300
           LDD++D  F +KKE          +LR+  DV G+  D+K NTPRSKHS TEQRRRSKIN
Sbjct: 241 LDDEED--FIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKIN 300

Query: 301 HRFQMLRDVIPQSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFVEKNAP 360
            RFQMLR +IP SDQKRDKASFLLEV+EYI+FLQEK   Y  SYQ  N   AK +   + 
Sbjct: 301 DRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSN 360

Query: 361 SSSSLVPGSSHYA---DDSNTN-----SATTLNAVDPQPGSINNAVPFPLNAVDSE---- 420
           ++  LVP    +A   ++   N      AT    V   P +   + PFPL+   +     
Sbjct: 361 NNQQLVPEGVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTS-PFPLSIQSNSFFSP 420

Query: 421 --AG----YFDSDVAVASEIQ---------KEQDLTIEGGTINISSVYSQGLLNTLTHAL 458
             AG     F + VA +  ++         +E+D  +  G I ISSVYSQGL+ TL  AL
Sbjct: 421 VIAGNPVPQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREAL 480

[Close]

BLAST of Sed0006842 vs. TAIR 10
Match: AT5G08130.6 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 3.3e-73
Identity = 219/522 (41.95%), Postives = 291/522 (55.75%), Query Frame = 0


Query: 1   MELPQSRPFGADQ---GSKSTHDFLSLYTHSSPQQDPRPSP----QGGYLKTHNFLQPHE 60
           MELPQ RPF   +   G K THDFLSL +HS+   DP+P+P    QG +LKTH+FLQP E
Sbjct: 1   MELPQPRPFKTQEFRTGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLE 60

Query: 61  ---RKRKV--ITKEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQ--P 120
               K  V  I    T  E+PPPP  PPP   +++ L  GI TY+IS + YF+   Q  P
Sbjct: 61  CVGAKEDVSRINSTTTASEKPPPPAPPPP---LQHVLPGGIGTYTISPIPYFHHHHQRIP 120

Query: 121 KPEGLVFAGAQSSSSTVERNNENSNAASFTTPENKLTQTEERAV-KKGKTGMENTVRDRP 180
           KPE        ++   V   N NSN +S+    +  T  +E A  KKG+T  EN+V +R 
Sbjct: 121 KPELSPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGER- 180

Query: 181 YEGGASRSQWTAAMERPSQSSSNNQPIG-----------KRNPSFMEMLKSAKSTSQDEE 240
               A+  QW  A ER SQS +NN   G            ++ SFM+M++SAK +SQ+++
Sbjct: 181 VNMRATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDD 240

Query: 241 LDDDDDDEFDIKKE----------ELRI--DVDGNRFDRKANTPRSKHSVTEQRRRSKIN 300
           LDD++D  F +KKE          +LR+  DV G+  D+K NTPRSKHS TEQRRRSKIN
Sbjct: 241 LDDEED--FIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKIN 300

Query: 301 HRFQMLRDVIPQSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFVEKNAP 360
            RFQMLR +IP SDQKRDKASFLLEV+EYI+FLQEK   Y  SYQ  N   AK +   + 
Sbjct: 301 DRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSN 360

Query: 361 SSSSLVPGSSHYA---DDSNTN-----SATTLNAVDPQPGSINNAVPFPLNAVDSE---- 420
           ++  LVP    +A   ++   N      AT    V   P +   + PFPL+   +     
Sbjct: 361 NNQQLVPEGVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTS-PFPLSIQSNSFFSP 420

Query: 421 --AG----YFDSDVAVASEIQ---------KEQDLTIEGGTINISSVYSQGLLNTLTHAL 458
             AG     F + VA +  ++         +E+D  +  G I ISSVYSQGL+ TL  AL
Sbjct: 421 VIAGNPVPQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREAL 480

[Close]

BLAST of Sed0006842 vs. TAIR 10
Match: AT5G08130.5 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 268.9 bits (686), Expect = 8.2e-72
Identity = 219/525 (41.71%), Postives = 292/525 (55.62%), Query Frame = 0


Query: 1   MELPQSRPFGADQ---GSKSTHDFLSLYTHSSPQQDPRPSP----QGGYLKTHNFLQPHE 60
           MELPQ RPF   +   G K THDFLSL +HS+   DP+P+P    QG +LKTH+FLQP E
Sbjct: 1   MELPQPRPFKTQEFRTGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLE 60

Query: 61  ---RKRKV--ITKEETDGERPPPPPVPPPWPSIENFLTRGIETYSISHVSYFNQRFQ--P 120
               K  V  I    T  E+PPPP  PPP   +++ L  GI TY+IS + YF+   Q  P
Sbjct: 61  CVGAKEDVSRINSTTTASEKPPPPAPPPP---LQHVLPGGIGTYTISPIPYFHHHHQRIP 120

Query: 121 KPEGLVFAGAQSSSSTVERNNENSNAASFTTPENKLTQTEERAV-KKGKTGMENTVRDR- 180
           KPE        ++   V   N NSN +S+    +  T  +E A  KKG+T  EN+V +R 
Sbjct: 121 KPELSPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERV 180

Query: 181 --PYEGGASRSQWTAAMERPSQSSSNNQPIG-----------KRNPSFMEMLKSAKSTSQ 240
               +  A+  QW  A ER SQS +NN   G            ++ SFM+M++SAK +SQ
Sbjct: 181 NMRADVAATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQ 240

Query: 241 DEELDDDDDDEFDIKKE----------ELRI--DVDGNRFDRKANTPRSKHSVTEQRRRS 300
           +++LDD++D  F +KKE          +LR+  DV G+  D+K NTPRSKHS TEQRRRS
Sbjct: 241 EDDLDDEED--FIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRS 300

Query: 301 KINHRFQMLRDVIPQSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFVEK 360
           KIN RFQMLR +IP SDQKRDKASFLLEV+EYI+FLQEK   Y  SYQ  N   AK +  
Sbjct: 301 KINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNW 360

Query: 361 NAPSSSSLVPGSSHYA---DDSNTN-----SATTLNAVDPQPGSINNAVPFPLNAVDSE- 420
            + ++  LVP    +A   ++   N      AT    V   P +   + PFPL+   +  
Sbjct: 361 -SNNNQQLVPEGVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTS-PFPLSIQSNSF 420

Query: 421 -----AG----YFDSDVAVASEIQ---------KEQDLTIEGGTINISSVYSQGLLNTLT 458
                AG     F + VA +  ++         +E+D  +  G I ISSVYSQGL+ TL 
Sbjct: 421 FSPVIAGNPVPQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLR 480

[Close]

BLAST of Sed0006842 vs. TAIR 10
Match: AT5G08130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 4.8e-48
Identity = 161/392 (41.07%), Postives = 218/392 (55.61%), Query Frame = 0


Query: 124 ERN----NENSNAASFTTPENKLTQTEERAV-KKGKTGMENTVRDR---PYEGGASRSQW 183
           ERN    N NSN +S+    +  T  +E A  KKG+T  EN+V +R     +  A+  QW
Sbjct: 7   ERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMRADVAATVGQW 66

Query: 184 TAAMERPSQSSSNNQPIG-----------KRNPSFMEMLKSAKSTSQDEELDDDDDDEFD 243
             A ER SQS +NN   G            ++ SFM+M++SAK +SQ+++LDD++D  F 
Sbjct: 67  PVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDDLDDEED--FI 126

Query: 244 IKKE----------ELRI--DVDGNRFDRKANTPRSKHSVTEQRRRSKINHRFQMLRDVI 303
           +KKE          +LR+  DV G+  D+K NTPRSKHS TEQRRRSKIN RFQMLR +I
Sbjct: 127 MKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRFQMLRQLI 186

Query: 304 PQSDQKRDKASFLLEVVEYIKFLQEKVQNYEGSYQRINQRSAKFVEKNAPSSSSLVPGSS 363
           P SDQKRDKASFLLEV+EYI+FLQEK   Y  SYQ  N   AK +   + ++  LVP   
Sbjct: 187 PNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSNNNQQLVPEGV 246

Query: 364 HYA---DDSNTN-----SATTLNAVDPQPGSINNAVPFPLNAVDSE------AG----YF 423
            +A   ++   N      AT    V   P +   + PFPL+   +       AG     F
Sbjct: 247 AFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTS-PFPLSIQSNSFFSPVIAGNPVPQF 306

Query: 424 DSDVAVASEIQ---------KEQDLTIEGGTINISSVYSQGLLNTLTHALHSLGVDLSQA 458
            + VA +  ++         +E+D  +  G I ISSVYSQGL+ TL  AL + GVDL++A
Sbjct: 307 HARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKA 366

The following BLAST results are available for this feature:

BLAST of Sed0006842 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531621.1	5.3e-158	62.92	transcription factor BIM1 [Cucurbita pepo subsp. pepo]	[more]
XP_023516932.1	5.9e-157	62.57	transcription factor BIM1-like [Cucurbita pepo subsp. pepo] >XP_023516933.1 tran...	[more]
XP_022921452.1	7.7e-157	62.74	transcription factor BIM1-like [Cucurbita moschata] >XP_022921453.1 transcriptio...	[more]
XP_022987923.1	1.7e-156	62.74	transcription factor BIM1-like [Cucurbita maxima] >XP_022987924.1 transcription ...	[more]
KAG6589583.1	2.2e-156	62.57	Transcription factor BIM1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0006842 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEZ3	1.6e-72	42.15	Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2	[more]
Q9CAA4	2.5e-33	37.74	Transcription factor BIM2 OS=Arabidopsis thaliana OX=3702 GN=BIM2 PE=1 SV=1	[more]
Q9FMB6	3.1e-23	38.21	Transcription factor BIM3 OS=Arabidopsis thaliana OX=3702 GN=BIM3 PE=1 SV=1	[more]

BLAST of Sed0006842 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0I1	3.7e-157	62.74	transcription factor BIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111429728 PE=...	[more]
A0A6J1JK70	8.3e-157	62.74	transcription factor BIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111485331 PE=4 ...	[more]
A0A6J1KJZ4	1.9e-156	62.04	transcription factor BIM1 OS=Cucurbita maxima OX=3661 GN=LOC111495290 PE=4 SV=1	[more]
A0A6J1C0A4	5.4e-156	63.51	transcription factor BIM1 OS=Momordica charantia OX=3673 GN=LOC111007188 PE=4 SV...	[more]
A0A0A0LSI8	1.1e-153	62.26	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015080 PE=4 S...	[more]

BLAST of Sed0006842 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08130.2	1.1e-73	42.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.4	1.1e-73	42.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.6	3.3e-73	41.95	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.5	8.2e-72	41.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.1	4.8e-48	41.07	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 292..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..143
None	No IPR available	PANTHER	PTHR46412:SF3	TRANSCRIPTION FACTOR BIM1	coord: 1..342
None	No IPR available	PANTHER	PTHR46412:SF3	TRANSCRIPTION FACTOR BIM1	coord: 375..406
None	No IPR available	CDD	cd11453	bHLH_AtBIM_like	coord: 244..315 e-value: 1.00672E-35 score: 124.122
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 251..301 e-value: 1.9E-12 score: 57.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 247..296 e-value: 1.1E-14 score: 54.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 245..295 score: 16.405571
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 242..319 e-value: 7.1E-26 score: 92.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 245..312
IPR044295	Transcription factor BIM1/2/3	PANTHER	PTHR46412	BES1-INTERACTING MYC-LIKE PROTEIN	coord: 1..342
IPR044295	Transcription factor BIM1/2/3	PANTHER	PTHR46412	BES1-INTERACTING MYC-LIKE PROTEIN	coord: 375..406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006842.1	Sed0006842.1	mRNA
Sed0006842.2	Sed0006842.2	mRNA
Sed0006842.3	Sed0006842.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity