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Sed0006820 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCAATATTACGTACCGAAAATAGCCCAGAAAAAAAAAAAAAAAATCCTGATTTGTTCATAAATAAATCTGAAGAATTCGCCTCCATTTGTCTTCTCCAATTCGTTTCCTCCTCTCAGATCTCCCTCTTACAAATGGTAATTTTTCAATTCCCTAAATCATAGTTCTTCGTTCCTTGATTCTTTTTTCTCTAGGGTTTTACGTTTCAGATTTTGATCAATGTTTTGGTATGTGAATTTCATTTCATTTCCGGGTTTGATGAAATTGACATTGTCGATTTGATGGGGATTTTGCAGACGACATCACGGCGTCTTGCAGATCGGAAGGTGGAGAGGTTCGAGAAGAACATTTTGAAGAGAGGGGCAGTGCCCGAGACTGTTACGAAGAAGGGAAAGGATTATCCCGTTGGCCCAATTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATGTGAGTTCTTAGTCCTAAATTGTGTTTTTTCACTCCTTGTGCTTATATTTTGGCATATTCTCTGGATTTCTGTTATGTGATTGGAGTTTTTGTGTGGTTGTTTGTAAGTTTATATATGTTTAAAGAATTTAATGTACCTTAATCTGTCCGAGAAGAACATGATATCTACATTTGAAAACATATGTTGTAACGTTTGTTTGTATAGCTATGATGCATTACTTAACTGCTGGAGATCCTTTCTATCATCTTTTGTACCCTATATCCTATATTGTAACTTCATAATATATTTTTTTTATAGGAAAGGATAAAAGTATGAAATAAGCCTATCCATAATATAACATTTATAATTTCGTAATATTAATGATTTTTTTTTAAAAAAAAACCTTTGTTTGTAAAGGTGGGTCGAAAGAATCTTAATGTTTTAAGAACTATTGAGGCTTACGCCTTAGAAATTTGGCTTTACGCCTTTTTGAATTCGAAGAGGCTTACGGAGAGAGGCTTGCGCCTTTATAAGGGTTTGAACTATAAGAATTATAATTATTACGACTAATTACTACTTTCTCTTATAATTAGACAACAAAAAAATCTAGAAAAAAACTTAAACTTTAAAAAAAAATTTGTCATTCAACGTTTTATAGAATAAATTCTATTATTAAATATATTAATATTGGAAGTTTTGCAACGTCATGCATTGCATTACTTTAGTCATCCATTCAATAAAAGATTCCAATTTTTTTTTCTCATGTATTCTTTTGTTGGAAGAAAAAATCGTTTCAAGGTCATTAATTTTAATTATGATCATCTTGTTGAGATCTCAATTGTCCCACATTGGAAAGTAGAAGAGTCCAACCTCAATATAAAAAGAATATAAAAAGAGATATGAGTTACTCACTTCATTGCCAATTGGTTTTGAGGTGGAACCTCATATTCTCTAATATGGTATTAGAGCCCATAAAGCCCAAACGGGTATCGGTCCAATAAAAATGAAATTGAGATCCGATTCAAGAATGGTGAGCCCAAAAAAGGCACCATCTTGAGGGGGCATGTTGAGATCTCAATTGTCCCACATTGGAAAGTGGGAGAGTCCAACATCAATATAAAAAGAGATATGAGTTACTCCTCCATTGCCAATTGATTTTGAGTTAGAATCTCATATTCTCTAATACATCTGTTGGCTAGTTTTCATTTTTCATCTTCTTTTGGAGTTCTTTGTGGTATATTTCTCTTTTGTTTCATTCGACGATAAAATTGTTTCTTATTAAAGAAACTCAATTCTGTTAGTGATAACAATCTTTATGTTAAAGACAACATTTTAGAATTTTTTTAAAAATTAAAACTAAGGCTTATGCCACCCGAGGCTTGCACTCATCTCGTCAAAGAGAAAAAGTCCCAAGGCTGCTTAAAACATTGTTGGTAGCTAGCAATCCACCCATTTTTGGTCGGATTTTCATGACATGTCTGGATGAAGGTAGCGCAGAATAAGCCCAAAATTGTCGTGATTCGATTTTATTGATATTTTTTCTAGCTCAGCAGAGAGCATCTGAACAATTCCCATCAATGGTTTAACATAGACCTACATAAATTTGAATGCTTTATTTTAGAGGTTTCCTCCCAGCCGAAGCTTCTGCATTTTCATTTTGATCATTGAAGTGAATGGTGAACACTTTCAGGATTTTATGTCTGTGTGCCTATGGGCTGATAATCTTTTGTTCCATTGCTTGAAATGTGCAGCTCTGTTTCAGATAATCAGGACCGCAACAGGTGGAGGAATGGCTTGAGCCATCTTCAGTTCTGAGGAGTAGCAGAAAGCAGGACATGAGGTTAAAACTTCTTGTGTTTATTTTTTATTCCTCTCTGTTCTGTGTTACTCTTTAGGAGGAGAAGTTTGGTAGTGTAGAGGAAGTAAACACCATTTATGGTCATCCTGTGAAGTACTCATTATAAAATTAATTTAAATAACATTGCACACATCTAAGTGCTATGCTTTCTTATATCTAGTTGACTAATTGTTCATTGTTCATGTCATGATCTCCTTAGCTCTTAAGGTATACTTTTTTTTAAATGTGAGTTTAGATTTTTTTTTTTGAA TTTCAATATTACGTACCGAAAATAGCCCAGAAAAAAAAAAAAAAAATCCTGATTTGTTCATAAATAAATCTGAAGAATTCGCCTCCATTTGTCTTCTCCAATTCGTTTCCTCCTCTCAGATCTCCCTCTTACAAATGACGACATCACGGCGTCTTGCAGATCGGAAGGTGGAGAGGTTCGAGAAGAACATTTTGAAGAGAGGGGCAGTGCCCGAGACTGTTACGAAGAAGGGAAAGGATTATCCCGTTGGCCCAATTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATCTCTGTTTCAGATAATCAGGACCGCAACAGGTGGAGGAATGGCTTGAGCCATCTTCAGTTCTGAGGAGTAGCAGAAAGCAGGACATGAGGTTAAAACTTCTTGTGTTTATTTTTTATTCCTCTCTGTTCTGTGTTACTCTTTAGGAGGAGAAGTTTGGTAGTGTAGAGGAAGTAAACACCATTTATGGTCATCCTGTGAAGTACTCATTATAAAATTAATTTAAATAACATTGCACACATCTAAGTGCTATGCTTTCTTATATCTAGTTGACTAATTGTTCATTGTTCATGTCATGATCTCCTTAGCTCTTAAGGTATACTTTTTTTTAAATGTGAGTTTAGATTTTTTTTTTTGAA ATGACGACATCACGGCGTCTTGCAGATCGGAAGGTGGAGAGGTTCGAGAAGAACATTTTGAAGAGAGGGGCAGTGCCCGAGACTGTTACGAAGAAGGGAAAGGATTATCCCGTTGGCCCAATTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATCTCTGTTTCAGATAATCAGGACCGCAACAGGTGGAGGAATGGCTTGA MTTSRRLADRKVERFEKNILKRGAVPETVTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRTATGGGMA Homology
BLAST of Sed0006820 vs. NCBI nr
Match: XP_038900855.1 (stress-associated endoplasmic reticulum protein 2-like [Benincasa hispida]) HSP 1 Score: 132.5 bits (332), Expect = 1.4e-27 Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Sed0006820 vs. NCBI nr
Match: XP_022956326.1 (stress-associated endoplasmic reticulum protein 2-like [Cucurbita moschata] >XP_022979456.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >XP_023526291.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita pepo subsp. pepo] >KAG6582010.1 Stress-associated endoplasmic reticulum protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018433.1 Stress-associated endoplasmic reticulum protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131.7 bits (330), Expect = 2.4e-27 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Sed0006820 vs. NCBI nr
Match: XP_004152134.1 (stress-associated endoplasmic reticulum protein 2 [Cucumis sativus] >KGN53016.1 hypothetical protein Csa_015278 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 3.1e-27 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of Sed0006820 vs. NCBI nr
Match: XP_022932563.1 (stress-associated endoplasmic reticulum protein 2-like isoform X2 [Cucurbita moschata] >XP_022972333.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >XP_023538872.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita pepo subsp. pepo] >KAG6597676.1 Stress-associated endoplasmic reticulum protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 130.2 bits (326), Expect = 6.8e-27 Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Sed0006820 vs. NCBI nr
Match: XP_018836780.1 (stress-associated endoplasmic reticulum protein 2-like [Juglans regia]) HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26 Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy Swiss-Prot
Match: Q3T073 (Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus OX=9913 GN=SERP2 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 4.8e-07 Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy Swiss-Prot
Match: Q8N6R1 (Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens OX=9606 GN=SERP2 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 4.8e-07 Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy Swiss-Prot
Match: Q6TAW2 (Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus OX=10090 GN=Serp2 PE=3 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 4.8e-07 Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy Swiss-Prot
Match: Q5REZ1 (Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii OX=9601 GN=SERP1 PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 5.0e-04 Identity = 25/54 (46.30%), Postives = 34/54 (62.96%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy TrEMBL
Match: A0A6J1IQU2 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479167 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy TrEMBL
Match: A0A6J1GW87 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111458060 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy TrEMBL
Match: A0A0A0KYW0 (Stress associated endoplasmic reticulum protein OS=Cucumis sativus OX=3659 GN=Csa_4G011630 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-27 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy TrEMBL
Match: A0A6J1I9M5 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470902 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27 Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Sed0006820 vs. ExPASy TrEMBL
Match: A0A6J1F232 (stress-associated endoplasmic reticulum protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439082 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27 Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Sed0006820 vs. TAIR 10
Match: AT1G27350.1 (Ribosome associated membrane protein RAMP4 ) HSP 1 Score: 124.0 bits (310), Expect = 4.6e-29 Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of Sed0006820 vs. TAIR 10
Match: AT1G27330.1 (Ribosome associated membrane protein RAMP4 ) HSP 1 Score: 124.0 bits (310), Expect = 4.6e-29 Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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