Sed0006758 (gene) Chayote v1

Overview


Name	Sed0006758
Type	gene
Organism	Sechium edule (Chayote v1)
Description	short-chain dehydrogenase reductase 3b-like
Location	LG07: 4723014 .. 4724769 (-)
RNA-Seq Expression	Sed0006758
Synteny	Sed0006758

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTAATTTAAGGAATAAAAAAAAAAGAGAGCTTAATTTCAAGACAGTTCTTAATAATGTCTAGGTAATATTTTTTTTCTCTCTCAAAATTACATACATTTTTCTCATTTATTATCCATTAATTATCATGTCCATATTCATTTCGAAAAAAAAATAAAAAATTATCATGTCCATATTTTAATTCACGGCCCTTCACAAGCTCTTGGCTTTGTGCAAAATTTCCCACACAGGCGGCTGCATGGGAAGGTTGCTCTCATAACCGGAGCTGCTAGCGGCATCGGTGAAGAGACCGCGAGGCTATTTGTAGCCAATGGCGCTTTTGTTGCTGTAGTCGACATTAATGACGAACTAGGCCAAAAAGTTGTAGCCTCCATCGGCACCGACCATGCTAGCTTTCATCATTGTGACGTGAGAGACGAGAAGCAAGTCGAGGCTACAGTCAATTGCATCATCGAGAAACACGGCCACTTGGACATTCTTTTTAGCAATGCTGGCATTGATAACTCTATCACTTCAATTCTAGAGCTTGACATGTCCGAATACGATAACATTATGTCAACTAATGTTCGTGGGGTATGCTATATAATTATATTTGAATTGAATTTTATTACTGATCTCACGCTCGAAAGATGAAGAAGGACCTTACATCGTTCATAAGCTATTTATATGAACTATTTCTTCTTATTATCACTTAATTTTATGATGAAATCTCATATAATAGAGTATTAAAACTCATAAAACTTAAATATAATAATGAATTGATATAAAAAGAAATAATTAGTCAAAAAATGATGAATCTAATGAGGCACATTCCTTAAAGAATTGTTAAGAGTAATTTATTAGATTAGTATAGAGTTTAGTATAGGTATTTAGTACGCCTCATTAGGTTAGCCTTATTGCTCTTTATACAATTTAGGTTTTAAGTTGCAAGGAGTGTGATACAAATGCTCCTACACCAACTTTTTATCAATGCAATTATTCATTTTGACAATGATCTTCTACCTTCTAATATTATCAAACCTTATCATACACCAATGTTGAAGATCTGACAAAGAAAAATGTGGAAAACTCACAACATTTATAATTAGTTATGAAATAAAACTTTATGTTATCTAATAAACTTTAGCTACCCTTTATTGTTTATAAAAACTTCATATATTTTTACAAGGTGGTTGCGACGATCAAGCATGTGGGACGAGTGATGGTAGAGCGAAATATACGAGGGTCAATCATCTGCACGGGGAGTGTGGCATCAGTGATTGCCGCTCCAGGGGCAGTATCACTTCCGTACATAAGTTCAAAGCATGCATTGTTGGGAGTGGTGAAGTCGAGCTGCGCAGATCTCGGGGCATATGGGATTCGAGTGAATTGTGTGTCGCCGCATGGCGTCGCAACGCCGCTTACTTTTCGGATTTGGAATATGGAAGCGAGTGAAATTGAAAACATGGTTGCTTCATCGGCAAACTTGAAAGGTGTGGTATTGAAGACTAGCCATATAGCTGAGGCTGCTCTATTTCTTGCATCTGATGAATCAGCTTATGTTAGTGGACACAACTTGGTTGTGGATGGAGGATTCTCTGTTGTCAAATCATTATGATCCTTTCCTTAACTATGTTTTTGAATGATCCATATGGTGCAAAAAAAAAAGAAAAGAAAGAAAACGACCGTGTATCAATTAAAATAAAAGCTTATTAAAGTCCCGTTTGATAATTATTCTGTTTTTTGTTTATGAAATTTAAGTTTATTTCTATTCAAA

mRNA sequence

GCTTAATTTAAGGAATAAAAAAAAAAGAGAGCTTAATTTCAAGACAGTTCTTAATAATGTCTAGGCGGCTGCATGGGAAGGTTGCTCTCATAACCGGAGCTGCTAGCGGCATCGGTGAAGAGACCGCGAGGCTATTTGTAGCCAATGGCGCTTTTGTTGCTGTAGTCGACATTAATGACGAACTAGGCCAAAAAGTTGTAGCCTCCATCGGCACCGACCATGCTAGCTTTCATCATTGTGACGTGAGAGACGAGAAGCAAGTCGAGGCTACAGTCAATTGCATCATCGAGAAACACGGCCACTTGGACATTCTTTTTAGCAATGCTGGCATTGATAACTCTATCACTTCAATTCTAGAGCTTGACATGTCCGAATACGATAACATTATGTCAACTAATGTTCGTGGGGTGGTTGCGACGATCAAGCATGTGGGACGAGTGATGGTAGAGCGAAATATACGAGGGTCAATCATCTGCACGGGGAGTGTGGCATCAGTGATTGCCGCTCCAGGGGCAGTATCACTTCCGTACATAAGTTCAAAGCATGCATTGTTGGGAGTGGTGAAGTCGAGCTGCGCAGATCTCGGGGCATATGGGATTCGAGTGAATTGTGTGTCGCCGCATGGCGTCGCAACGCCGCTTACTTTTCGGATTTGGAATATGGAAGCGAGTGAAATTGAAAACATGGTTGCTTCATCGGCAAACTTGAAAGGTGTGGTATTGAAGACTAGCCATATAGCTGAGGCTGCTCTATTTCTTGCATCTGATGAATCAGCTTATGTTAGTGGACACAACTTGGTTGTGGATGGAGGATTCTCTGTTGTCAAATCATTATGATCCTTTCCTTAACTATGTTTTTGAATGATCCATATGGTGCAAAAAAAAAAGAAAAGAAAGAAAACGACCGTGTATCAATTAAAATAAAAGCTTATTAAAGTCCCGTTTGATAATTATTCTGTTTTTTGTTTATGAAATTTAAGTTTATTTCTATTCAAA

Coding sequence (CDS)

ATGTCTAGGCGGCTGCATGGGAAGGTTGCTCTCATAACCGGAGCTGCTAGCGGCATCGGTGAAGAGACCGCGAGGCTATTTGTAGCCAATGGCGCTTTTGTTGCTGTAGTCGACATTAATGACGAACTAGGCCAAAAAGTTGTAGCCTCCATCGGCACCGACCATGCTAGCTTTCATCATTGTGACGTGAGAGACGAGAAGCAAGTCGAGGCTACAGTCAATTGCATCATCGAGAAACACGGCCACTTGGACATTCTTTTTAGCAATGCTGGCATTGATAACTCTATCACTTCAATTCTAGAGCTTGACATGTCCGAATACGATAACATTATGTCAACTAATGTTCGTGGGGTGGTTGCGACGATCAAGCATGTGGGACGAGTGATGGTAGAGCGAAATATACGAGGGTCAATCATCTGCACGGGGAGTGTGGCATCAGTGATTGCCGCTCCAGGGGCAGTATCACTTCCGTACATAAGTTCAAAGCATGCATTGTTGGGAGTGGTGAAGTCGAGCTGCGCAGATCTCGGGGCATATGGGATTCGAGTGAATTGTGTGTCGCCGCATGGCGTCGCAACGCCGCTTACTTTTCGGATTTGGAATATGGAAGCGAGTGAAATTGAAAACATGGTTGCTTCATCGGCAAACTTGAAAGGTGTGGTATTGAAGACTAGCCATATAGCTGAGGCTGCTCTATTTCTTGCATCTGATGAATCAGCTTATGTTAGTGGACACAACTTGGTTGTGGATGGAGGATTCTCTGTTGTCAAATCATTATGA

Protein sequence

MSRRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCDVRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATIKHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIRVNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYVSGHNLVVDGGFSVVKSL

Homology

[Close]

BLAST of Sed0006758 vs. NCBI nr
Match: XP_038897308.1 (short-chain dehydrogenase reductase 3b-like [Benincasa hispida])

HSP 1 Score: 377.9 bits (969), Expect = 7.2e-101
Identity = 199/258 (77.13%), Postives = 223/258 (86.43%), Query Frame = 0


Query: 3   RRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCD 62
           RRLHGKVALITGAASGIG+ETARLFVANGAFV V DI+D+LGQKVVASIG D ASFHHCD
Sbjct: 9   RRLHGKVALITGAASGIGKETARLFVANGAFVVVADIDDKLGQKVVASIGIDQASFHHCD 68

Query: 63  VRDEKQVEATVNCIIEKHGHLDILFSNAGI-DNSITSILELDMSEYDNIMSTNVRGVVAT 122
           VRDEKQVE TVN  +EKH  LDILFSNAGI D  I+SIL LDMS +DN+M+TNV GVVAT
Sbjct: 69  VRDEKQVEETVNYTVEKHSRLDILFSNAGITDPVISSILTLDMSNFDNVMATNVHGVVAT 128

Query: 123 IKHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGI 182
           IKH GRVMVER IRGSIICT S+A+VIA  G   L Y SSKHA+LGV++SSC +LGA+GI
Sbjct: 129 IKHAGRVMVERKIRGSIICTASIAAVIA--GTPPLAYTSSKHAVLGVMRSSCGELGAHGI 188

Query: 183 RVNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAY 242
           RVNCVSPH VATPLT R + +E SE+E +V SSA+LKGVVLKTSHIA+A LFLASDESAY
Sbjct: 189 RVNCVSPHAVATPLTCRAFGLEESEVEEIVCSSASLKGVVLKTSHIADAVLFLASDESAY 248

Query: 243 VSGHNLVVDGGFSVVKSL 260
           +SG NLVVDGGF+VVKS+
Sbjct: 249 ISGQNLVVDGGFTVVKSV 264

[Close]

BLAST of Sed0006758 vs. NCBI nr
Match: XP_022154244.1 (short-chain dehydrogenase reductase 3b-like, partial [Momordica charantia])

HSP 1 Score: 368.2 bits (944), Expect = 5.7e-98
Identity = 190/257 (73.93%), Postives = 218/257 (84.82%), Query Frame = 0


Query: 2   SRRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHC 61
           SRRLHGKVALITGAASGIGEETARLF ANGAFV V DI+DELGQ+V ASIG D ASF HC
Sbjct: 1   SRRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQQVAASIGADKASFRHC 60

Query: 62  DVRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVAT 121
           +VRDEKQVE TV+  +EKHG LDILFSNA + +S TSILE DM+E+DN+M+TNV GV+AT
Sbjct: 61  NVRDEKQVEETVSYTVEKHGRLDILFSNAAVMDSFTSILEFDMAEFDNVMTTNVSGVIAT 120

Query: 122 IKHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGI 181
           IKH GR MVE+NIRGSIICT SV ++I   G V+  Y SSKHA++GV++SSCA+LG YGI
Sbjct: 121 IKHAGRAMVEQNIRGSIICTASVVAMIGGIGPVA--YASSKHAVVGVMRSSCAELGTYGI 180

Query: 182 RVNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAY 241
           RVNCVSPHGVATP+  R  N++ SE+E +V S ANLKGVVLK SH+AEAALFLASDESA 
Sbjct: 181 RVNCVSPHGVATPMACRSLNLKGSEVEELVCSRANLKGVVLKASHMAEAALFLASDESAC 240

Query: 242 VSGHNLVVDGGFSVVKS 259
           VSG NLVVDGG+SVVKS
Sbjct: 241 VSGQNLVVDGGYSVVKS 255

[Close]

BLAST of Sed0006758 vs. NCBI nr
Match: XP_022991626.1 (short-chain dehydrogenase reductase 3b-like [Cucurbita maxima])

HSP 1 Score: 368.2 bits (944), Expect = 5.7e-98
Identity = 189/258 (73.26%), Postives = 217/258 (84.11%), Query Frame = 0


Query: 2   SRRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHC 61
           +RRLHGKVALITGAA+GIGEETARLF ANGA+V V DINDELGQKV ASIG D ASFHHC
Sbjct: 5   TRRLHGKVALITGAANGIGEETARLFAANGAYVVVADINDELGQKVAASIGVDQASFHHC 64

Query: 62  DVRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVAT 121
           DVRDE QVE TVN  +EK+G LDIL SNAGI  S+TSILE DMS +D+++STNVRGVVAT
Sbjct: 65  DVRDENQVEETVNYTVEKYGRLDILVSNAGITGSLTSILEFDMSNFDDVISTNVRGVVAT 124

Query: 122 IKHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGI 181
           IKH G+ MV+ NIRGSIIC  S ASV+   G VS  YI+SKHA+LGVV+S C +LGAYGI
Sbjct: 125 IKHAGQAMVKGNIRGSIICMASTASVLG--GVVSTAYITSKHAILGVVRSCCGELGAYGI 184

Query: 182 RVNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAY 241
           RVNCVSP+ VAT +T   +NME SE+E +V++SA+LKGVVLK SH+AEA +FLASDESAY
Sbjct: 185 RVNCVSPYAVATRMTCEFYNMEGSEVEELVSASASLKGVVLKASHVAEAVVFLASDESAY 244

Query: 242 VSGHNLVVDGGFSVVKSL 260
           VSG NLVVDGGF+ VKSL
Sbjct: 245 VSGQNLVVDGGFTAVKSL 260

[Close]

BLAST of Sed0006758 vs. NCBI nr
Match: KAG7014287.1 (Short-chain dehydrogenase reductase 3b, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366.3 bits (939), Expect = 2.2e-97
Identity = 190/256 (74.22%), Postives = 216/256 (84.38%), Query Frame = 0


Query: 3   RRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCD 62
           RRLHGKVALITGAASGIGEETARLF ANGAFV V DI+DELG+KV ASIG D ASFHHCD
Sbjct: 5   RRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGRKVAASIGIDQASFHHCD 64

Query: 63  VRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATI 122
           VRDEKQVE TV+  +EKHG LDILFSNAGI  S+ SIL LD+S++DN  +TNVRGVV TI
Sbjct: 65  VRDEKQVEETVSYTVEKHGGLDILFSNAGIVGSLASILSLDISDFDNAFATNVRGVVGTI 124

Query: 123 KHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIR 182
           KH  R MVE+NIRGSIIC  SVAS++   G  S+ Y SSKHA+LGVV+SS  +LGAYGIR
Sbjct: 125 KHSARAMVEKNIRGSIICMASVASMVGGIG--SIAYTSSKHAVLGVVRSSSLELGAYGIR 184

Query: 183 VNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYV 242
           VNCVSPHGVATPL  R  NME S++E +V++SA+LKGVVLK SH+AEAALFLASDESAY+
Sbjct: 185 VNCVSPHGVATPLARRTLNMEGSKVEELVSASASLKGVVLKASHVAEAALFLASDESAYI 244

Query: 243 SGHNLVVDGGFSVVKS 259
           SG NLVVDGGF+ V+S
Sbjct: 245 SGQNLVVDGGFTAVRS 258

[Close]

BLAST of Sed0006758 vs. NCBI nr
Match: XP_038899500.1 (short-chain dehydrogenase reductase 3b-like [Benincasa hispida])

HSP 1 Score: 365.9 bits (938), Expect = 2.8e-97
Identity = 186/258 (72.09%), Postives = 218/258 (84.50%), Query Frame = 0


Query: 2   SRRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHC 61
           +RRLHGKVALITGAASGIGEETARLF ANGA V + DINDELG+ V ASIG D ASFHHC
Sbjct: 4   ARRLHGKVALITGAASGIGEETARLFAANGASVVIADINDELGRNVAASIGIDQASFHHC 63

Query: 62  DVRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVAT 121
           DVRDE+QVE TV+  +EKHG LDILFSNAGI  S+TSIL+LDM  +DNIM+TNVRGVVAT
Sbjct: 64  DVRDEEQVEKTVSYTVEKHGRLDILFSNAGIVGSLTSILKLDMFNFDNIMATNVRGVVAT 123

Query: 122 IKHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGI 181
           IKH G+ MVERNIRGSIICT SV++ +   G  S+ Y SSKHA+LGVV+SSC +LG YGI
Sbjct: 124 IKHGGQAMVERNIRGSIICTTSVSATVG--GVASMAYTSSKHAVLGVVRSSCMELGTYGI 183

Query: 182 RVNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAY 241
           RVNCVSP+GVATPL FR  N+E +++E +++S  +LKGVVLK SHIAEAALFLASDES Y
Sbjct: 184 RVNCVSPYGVATPLAFRTLNLEENKLEEVLSSKTSLKGVVLKASHIAEAALFLASDESVY 243

Query: 242 VSGHNLVVDGGFSVVKSL 260
           +SG NL+VDGGF+ V+S+
Sbjct: 244 ISGQNLIVDGGFTAVRSI 259

[Close]

BLAST of Sed0006758 vs. ExPASy Swiss-Prot
Match: Q94K41 (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.4e-75
Identity = 147/255 (57.65%), Postives = 185/255 (72.55%), Query Frame = 0


Query: 3   RRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCD 62
           +RL GK+ +ITG ASGIG E+ RLF  +GA V +VD+ DELGQ V  SIG D AS++HCD
Sbjct: 4   KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCD 63

Query: 63  VRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATI 122
           V +E +VE  V   +EK+G LD+LFSNAG+     SIL+L+++E D  ++ N+RG  A I
Sbjct: 64  VTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTAAFI 123

Query: 123 KHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIR 182
           KH  R MVE+ IRGSI+CT SVA+ IA  G     Y +SKH LLG++KS+   LG YGIR
Sbjct: 124 KHAARAMVEKGIRGSIVCTTSVAAEIA--GTAPHGYTTSKHGLLGLIKSASGGLGKYGIR 183

Query: 183 VNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYV 242
           VN V+P GVATPL    + ME + +E   ++SANLKG+VLK  H+AEAALFLASDESAYV
Sbjct: 184 VNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYV 243

Query: 243 SGHNLVVDGGFSVVK 258
           SG NL VDGG+SVVK
Sbjct: 244 SGQNLAVDGGYSVVK 256

[Close]

BLAST of Sed0006758 vs. ExPASy Swiss-Prot
Match: F4J2Z7 (Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-71
Identity = 147/254 (57.87%), Postives = 181/254 (71.26%), Query Frame = 0


Query: 5   LHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCDVR 64
           L GK+A+ITG ASGIG E  RLF  +GA V +VDI +ELGQ +  SIG D ASF+ C+V 
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 65  DEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATIKH 124
           DE  VE  V   +EKHG LD+LFSNAG+  +  S+L+LD+  +D  M+ NVRG  A IKH
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKH 163

Query: 125 VGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIRVN 184
             R MV    RGSI+CT S+A+ I  PG  S  Y +SKHALLG+++S+CA LG YGIRVN
Sbjct: 164 AARSMVASGTRGSIVCTTSIAAEIGGPGPHS--YTASKHALLGLIRSACAGLGQYGIRVN 223

Query: 185 CVSPHGVATPLTFRIWNMEASE-IENMVASSANLKGVVLKTSHIAEAALFLASDESAYVS 244
            V+P+GVAT +T   +N EA + +E    +  NLKGVVLK  HIAEAALFLASD+S Y+S
Sbjct: 224 GVAPYGVATGMT-SAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYIS 283

Query: 245 GHNLVVDGGFSVVK 258
           G NLVVDGGFSVVK
Sbjct: 284 GQNLVVDGGFSVVK 294

[Close]

BLAST of Sed0006758 vs. ExPASy Swiss-Prot
Match: O80713 (Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-70
Identity = 144/256 (56.25%), Postives = 179/256 (69.92%), Query Frame = 0


Query: 4   RLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCDV 63
           RL GK+A+ITG ASGIG E  RLF  +GA V +VD  +ELGQ V  S+G D ASF+ CDV
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query: 64  RDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATIK 123
            +EK+VE  V   +EK+G LD+LFSNAG+     S L+L++ ++D  M+ NVRG  A IK
Sbjct: 65  TNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIK 124

Query: 124 HVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIRV 183
           H  R MVE+  RGSI+CT SVAS I  PG  +  Y +SKHALLG+VKS+C  LG YGIRV
Sbjct: 125 HAARAMVEKGTRGSIVCTTSVASEIGGPGPHA--YTASKHALLGLVKSACGGLGKYGIRV 184

Query: 184 NCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYVS 243
           N V+P+ VAT +  R        +E   A++  LKGVVLK  H+AEAALFLASD+SAYVS
Sbjct: 185 NGVAPYAVATAINSRD-EETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVS 244

Query: 244 GHNLVVDGGFSVVKSL 260
           G NL VDGG+SVVK +
Sbjct: 245 GQNLAVDGGYSVVKPI 257

[Close]

BLAST of Sed0006758 vs. ExPASy Swiss-Prot
Match: F4J300 (Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.4e-70
Identity = 145/256 (56.64%), Postives = 182/256 (71.09%), Query Frame = 0


Query: 3   RRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCD 62
           +RL GK+ +ITG ASGIG E ARLF  +GA V +VD+ +ELGQ V  SIG D ASF+ CD
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCD 63

Query: 63  VRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATI 122
           + DE +VE  V   +EKHG LD+LFSNAG+     SIL+LD+  +D  M+ NVRG  A I
Sbjct: 64  ITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAAAFI 123

Query: 123 KHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIR 182
           KH  R MV    RGSI+CT SV + I  PG  S  Y +SKHALLG+V+S+C  LG YGIR
Sbjct: 124 KHAARSMVASGTRGSIVCTTSVTAEIGGPGPHS--YTASKHALLGLVRSACGGLGKYGIR 183

Query: 183 VNCVSPHGVATPLTFRIWNMEASE-IENMVASSANLKGVVLKTSHIAEAALFLASDESAY 242
           VN V+P+GVAT LT   +N E  + +E+  +++A LKGVVLK  H+A+AALFLASD+S Y
Sbjct: 184 VNGVAPYGVATGLT--SYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVY 243

Query: 243 VSGHNLVVDGGFSVVK 258
           +SG NL VDGG+SVVK
Sbjct: 244 ISGQNLGVDGGYSVVK 255

[Close]

BLAST of Sed0006758 vs. ExPASy Swiss-Prot
Match: O80714 (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.2e-68
Identity = 134/254 (52.76%), Postives = 177/254 (69.69%), Query Frame = 0


Query: 4   RLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCDV 63
           RL GK+ +ITG ASGIG + ARLF  +GA V +VD+ +ELGQ V   IG D ASF+ CDV
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 64  RDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATIK 123
            +E +VE  V   +EKHG LD+LFSNAG+   + S L+ D+  +D IM+ NVRG  A IK
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAAAFIK 124

Query: 124 HVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIRV 183
           H  R MVE+  RGSI+CT SV++ I   G     Y +SKH L+G+++S+C DLG YGIRV
Sbjct: 125 HAARAMVEKGTRGSIVCTTSVSAEI---GGGHHGYTASKHGLVGLIRSACGDLGKYGIRV 184

Query: 184 NCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYVS 243
           N V+P+ VATP+T     +   ++E+   +   LKG+VLK SH+A+ ALFLASD+SAY+S
Sbjct: 185 NGVAPYAVATPMTSHD-EVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYIS 244

Query: 244 GHNLVVDGGFSVVK 258
           G NL VDGG++VVK
Sbjct: 245 GQNLAVDGGYTVVK 254

[Close]

BLAST of Sed0006758 vs. ExPASy TrEMBL
Match: A0A6J1JR99 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC111488187 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.8e-98
Identity = 189/258 (73.26%), Postives = 217/258 (84.11%), Query Frame = 0


Query: 2   SRRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHC 61
           +RRLHGKVALITGAA+GIGEETARLF ANGA+V V DINDELGQKV ASIG D ASFHHC
Sbjct: 5   TRRLHGKVALITGAANGIGEETARLFAANGAYVVVADINDELGQKVAASIGVDQASFHHC 64

Query: 62  DVRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVAT 121
           DVRDE QVE TVN  +EK+G LDIL SNAGI  S+TSILE DMS +D+++STNVRGVVAT
Sbjct: 65  DVRDENQVEETVNYTVEKYGRLDILVSNAGITGSLTSILEFDMSNFDDVISTNVRGVVAT 124

Query: 122 IKHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGI 181
           IKH G+ MV+ NIRGSIIC  S ASV+   G VS  YI+SKHA+LGVV+S C +LGAYGI
Sbjct: 125 IKHAGQAMVKGNIRGSIICMASTASVLG--GVVSTAYITSKHAILGVVRSCCGELGAYGI 184

Query: 182 RVNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAY 241
           RVNCVSP+ VAT +T   +NME SE+E +V++SA+LKGVVLK SH+AEA +FLASDESAY
Sbjct: 185 RVNCVSPYAVATRMTCEFYNMEGSEVEELVSASASLKGVVLKASHVAEAVVFLASDESAY 244

Query: 242 VSGHNLVVDGGFSVVKSL 260
           VSG NLVVDGGF+ VKSL
Sbjct: 245 VSGQNLVVDGGFTAVKSL 260

[Close]

BLAST of Sed0006758 vs. ExPASy TrEMBL
Match: A0A6J1DLH0 (short-chain dehydrogenase reductase 3b-like OS=Momordica charantia OX=3673 GN=LOC111021542 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.8e-98
Identity = 190/257 (73.93%), Postives = 218/257 (84.82%), Query Frame = 0


Query: 2   SRRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHC 61
           SRRLHGKVALITGAASGIGEETARLF ANGAFV V DI+DELGQ+V ASIG D ASF HC
Sbjct: 1   SRRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQQVAASIGADKASFRHC 60

Query: 62  DVRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVAT 121
           +VRDEKQVE TV+  +EKHG LDILFSNA + +S TSILE DM+E+DN+M+TNV GV+AT
Sbjct: 61  NVRDEKQVEETVSYTVEKHGRLDILFSNAAVMDSFTSILEFDMAEFDNVMTTNVSGVIAT 120

Query: 122 IKHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGI 181
           IKH GR MVE+NIRGSIICT SV ++I   G V+  Y SSKHA++GV++SSCA+LG YGI
Sbjct: 121 IKHAGRAMVEQNIRGSIICTASVVAMIGGIGPVA--YASSKHAVVGVMRSSCAELGTYGI 180

Query: 182 RVNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAY 241
           RVNCVSPHGVATP+  R  N++ SE+E +V S ANLKGVVLK SH+AEAALFLASDESA 
Sbjct: 181 RVNCVSPHGVATPMACRSLNLKGSEVEELVCSRANLKGVVLKASHMAEAALFLASDESAC 240

Query: 242 VSGHNLVVDGGFSVVKS 259
           VSG NLVVDGG+SVVKS
Sbjct: 241 VSGQNLVVDGGYSVVKS 255

[Close]

BLAST of Sed0006758 vs. ExPASy TrEMBL
Match: A0A6J1GRA5 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC111456317 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.0e-97
Identity = 189/257 (73.54%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 3   RRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCD 62
           RRLHGKVALITGAASGIGEETARLFVANGAFV V DI+DELG+KV ASIG D ASFHHCD
Sbjct: 5   RRLHGKVALITGAASGIGEETARLFVANGAFVVVADIDDELGRKVAASIGIDQASFHHCD 64

Query: 63  VRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATI 122
           VRDEKQVE TV+  +EK+G LDILFSNAGI  S+ SIL LD+S++DN  +TNVRGVV TI
Sbjct: 65  VRDEKQVEETVSYTVEKYGGLDILFSNAGIMGSLASILSLDISDFDNTFATNVRGVVGTI 124

Query: 123 KHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIR 182
           KH  R MVE+NIRGSIIC  SVAS++   G  S+ Y SSKHA+LGVV+SS  +LGAYGIR
Sbjct: 125 KHSARAMVEKNIRGSIICMASVASMVGGIG--SIAYTSSKHAVLGVVRSSSLELGAYGIR 184

Query: 183 VNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYV 242
           VNCVSPHGVATPL  R  NME S++E +V++SA+LKGVVLK SH+AEAALFLASDESAY+
Sbjct: 185 VNCVSPHGVATPLARRTLNMEGSKVEELVSASASLKGVVLKASHVAEAALFLASDESAYI 244

Query: 243 SGHNLVVDGGFSVVKSL 260
           SG NLVVDGGF+ V+ +
Sbjct: 245 SGQNLVVDGGFTAVRPI 259

[Close]

BLAST of Sed0006758 vs. ExPASy TrEMBL
Match: A0A0A0K5W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414470 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 2.0e-96
Identity = 190/257 (73.93%), Postives = 214/257 (83.27%), Query Frame = 0


Query: 4   RLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCDV 63
           RLHGKVALITGAASGIGEETAR+F ANGAFV V DI+DELGQKVV SIG +HASFHHCDV
Sbjct: 5   RLHGKVALITGAASGIGEETARVFAANGAFVVVADIDDELGQKVVVSIGINHASFHHCDV 64

Query: 64  RDEKQVEATVNCIIEKHGHLDILFSNAGIDNSIT-SILELDMSEYDNIMSTNVRGVVATI 123
           RDEKQVE TVN  +EKHG LDILFSNAGI    T SIL LDMSE+DNIM+TNVRG+VATI
Sbjct: 65  RDEKQVEKTVNYTVEKHGRLDILFSNAGIIGPRTSSILTLDMSEFDNIMATNVRGIVATI 124

Query: 124 KHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIR 183
           KH G+VM+ER IRGSIIC  SVASV+A      L Y SSKHA+LGVV+SSC +LG YGIR
Sbjct: 125 KHAGQVMIERKIRGSIICMASVASVVA---GAPLAYTSSKHAVLGVVRSSCLELGVYGIR 184

Query: 184 VNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYV 243
           VNCVSP+GVATPLT R  NM+ SE E + +S A+LKGVVLK  H+AEA +FLASDES+Y+
Sbjct: 185 VNCVSPYGVATPLTCRGLNMQPSEAEEIYSSKASLKGVVLKARHVAEAVVFLASDESSYI 244

Query: 244 SGHNLVVDGGFSVVKSL 260
           SG NLVVDGGF+  KS+
Sbjct: 245 SGQNLVVDGGFTAFKSI 258

[Close]

BLAST of Sed0006758 vs. ExPASy TrEMBL
Match: A0A0A0KBA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414480 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.4e-96
Identity = 184/258 (71.32%), Postives = 216/258 (83.72%), Query Frame = 0


Query: 2   SRRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHC 61
           +RRLH KVALITGAASGIGEETARLFVANGAFV + DINDELGQKVV SIG D  +FHHC
Sbjct: 5   TRRLHEKVALITGAASGIGEETARLFVANGAFVVIADINDELGQKVVTSIGVDRVNFHHC 64

Query: 62  DVRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVAT 121
           DVRDEKQVE TV+  IEKHGHLDIL SNAGI  + +SILELDMS +DN++STNVRGV+AT
Sbjct: 65  DVRDEKQVEETVSYTIEKHGHLDILVSNAGIVETPSSILELDMSNFDNVISTNVRGVLAT 124

Query: 122 IKHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGI 181
           IKH GR MV++ IRGSI+CTGS A++I+   +++  Y SSKHA+LG+V+SSC +LG YGI
Sbjct: 125 IKHAGRAMVKQKIRGSIVCTGSTAALISFNPSLT-AYTSSKHAVLGLVRSSCEELGMYGI 184

Query: 182 RVNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAY 241
           RVNCVSPHG+ATPL  R  NME SE+E  ++S  +LKGVVLK SHIAEA +FLASDES Y
Sbjct: 185 RVNCVSPHGLATPLACRCLNMEVSEVEEKLSSMVSLKGVVLKASHIAEAVMFLASDESVY 244

Query: 242 VSGHNLVVDGGFSVVKSL 260
           +SG NL+VDGGF+ VK L
Sbjct: 245 ISGQNLIVDGGFTAVKPL 261

[Close]

BLAST of Sed0006758 vs. TAIR 10
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 3.8e-76
Identity = 147/255 (57.65%), Postives = 185/255 (72.55%), Query Frame = 0


Query: 3   RRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCD 62
           +RL GK+ +ITG ASGIG E+ RLF  +GA V +VD+ DELGQ V  SIG D AS++HCD
Sbjct: 4   KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCD 63

Query: 63  VRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATI 122
           V +E +VE  V   +EK+G LD+LFSNAG+     SIL+L+++E D  ++ N+RG  A I
Sbjct: 64  VTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTAAFI 123

Query: 123 KHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIR 182
           KH  R MVE+ IRGSI+CT SVA+ IA  G     Y +SKH LLG++KS+   LG YGIR
Sbjct: 124 KHAARAMVEKGIRGSIVCTTSVAAEIA--GTAPHGYTTSKHGLLGLIKSASGGLGKYGIR 183

Query: 183 VNCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYV 242
           VN V+P GVATPL    + ME + +E   ++SANLKG+VLK  H+AEAALFLASDESAYV
Sbjct: 184 VNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYV 243

Query: 243 SGHNLVVDGGFSVVK 258
           SG NL VDGG+SVVK
Sbjct: 244 SGQNLAVDGGYSVVK 256

[Close]

BLAST of Sed0006758 vs. TAIR 10
Match: AT3G29250.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 273.1 bits (697), Expect = 2.3e-73
Identity = 148/255 (58.04%), Postives = 182/255 (71.37%), Query Frame = 0


Query: 4   RLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCDV 63
           RL GK+A+ITG ASGIG E  RLF  +GA V +VDI +ELGQ +  SIG D ASF+ C+V
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNV 64

Query: 64  RDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATIK 123
            DE  VE  V   +EKHG LD+LFSNAG+  +  S+L+LD+  +D  M+ NVRG  A IK
Sbjct: 65  TDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIK 124

Query: 124 HVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIRV 183
           H  R MV    RGSI+CT S+A+ I  PG  S  Y +SKHALLG+++S+CA LG YGIRV
Sbjct: 125 HAARSMVASGTRGSIVCTTSIAAEIGGPGPHS--YTASKHALLGLIRSACAGLGQYGIRV 184

Query: 184 NCVSPHGVATPLTFRIWNMEASE-IENMVASSANLKGVVLKTSHIAEAALFLASDESAYV 243
           N V+P+GVAT +T   +N EA + +E    +  NLKGVVLK  HIAEAALFLASD+S Y+
Sbjct: 185 NGVAPYGVATGMT-SAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYI 244

Query: 244 SGHNLVVDGGFSVVK 258
           SG NLVVDGGFSVVK
Sbjct: 245 SGQNLVVDGGFSVVK 256

[Close]

BLAST of Sed0006758 vs. TAIR 10
Match: AT3G29250.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 271.2 bits (692), Expect = 8.8e-73
Identity = 147/254 (57.87%), Postives = 181/254 (71.26%), Query Frame = 0


Query: 5   LHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCDVR 64
           L GK+A+ITG ASGIG E  RLF  +GA V +VDI +ELGQ +  SIG D ASF+ C+V 
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 65  DEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATIKH 124
           DE  VE  V   +EKHG LD+LFSNAG+  +  S+L+LD+  +D  M+ NVRG  A IKH
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKH 163

Query: 125 VGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIRVN 184
             R MV    RGSI+CT S+A+ I  PG  S  Y +SKHALLG+++S+CA LG YGIRVN
Sbjct: 164 AARSMVASGTRGSIVCTTSIAAEIGGPGPHS--YTASKHALLGLIRSACAGLGQYGIRVN 223

Query: 185 CVSPHGVATPLTFRIWNMEASE-IENMVASSANLKGVVLKTSHIAEAALFLASDESAYVS 244
            V+P+GVAT +T   +N EA + +E    +  NLKGVVLK  HIAEAALFLASD+S Y+S
Sbjct: 224 GVAPYGVATGMT-SAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYIS 283

Query: 245 GHNLVVDGGFSVVK 258
           G NLVVDGGFSVVK
Sbjct: 284 GQNLVVDGGFSVVK 294

[Close]

BLAST of Sed0006758 vs. TAIR 10
Match: AT2G47130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 268.1 bits (684), Expect = 7.5e-72
Identity = 144/256 (56.25%), Postives = 179/256 (69.92%), Query Frame = 0


Query: 4   RLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCDV 63
           RL GK+A+ITG ASGIG E  RLF  +GA V +VD  +ELGQ V  S+G D ASF+ CDV
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query: 64  RDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATIK 123
            +EK+VE  V   +EK+G LD+LFSNAG+     S L+L++ ++D  M+ NVRG  A IK
Sbjct: 65  TNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIK 124

Query: 124 HVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIRV 183
           H  R MVE+  RGSI+CT SVAS I  PG  +  Y +SKHALLG+VKS+C  LG YGIRV
Sbjct: 125 HAARAMVEKGTRGSIVCTTSVASEIGGPGPHA--YTASKHALLGLVKSACGGLGKYGIRV 184

Query: 184 NCVSPHGVATPLTFRIWNMEASEIENMVASSANLKGVVLKTSHIAEAALFLASDESAYVS 243
           N V+P+ VAT +  R        +E   A++  LKGVVLK  H+AEAALFLASD+SAYVS
Sbjct: 185 NGVAPYAVATAINSRD-EETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVS 244

Query: 244 GHNLVVDGGFSVVKSL 260
           G NL VDGG+SVVK +
Sbjct: 245 GQNLAVDGGYSVVKPI 257

[Close]

BLAST of Sed0006758 vs. TAIR 10
Match: AT3G29260.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 9.7e-72
Identity = 145/256 (56.64%), Postives = 182/256 (71.09%), Query Frame = 0


Query: 3   RRLHGKVALITGAASGIGEETARLFVANGAFVAVVDINDELGQKVVASIGTDHASFHHCD 62
           +RL GK+ +ITG ASGIG E ARLF  +GA V +VD+ +ELGQ V  SIG D ASF+ CD
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCD 63

Query: 63  VRDEKQVEATVNCIIEKHGHLDILFSNAGIDNSITSILELDMSEYDNIMSTNVRGVVATI 122
           + DE +VE  V   +EKHG LD+LFSNAG+     SIL+LD+  +D  M+ NVRG  A I
Sbjct: 64  ITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAAAFI 123

Query: 123 KHVGRVMVERNIRGSIICTGSVASVIAAPGAVSLPYISSKHALLGVVKSSCADLGAYGIR 182
           KH  R MV    RGSI+CT SV + I  PG  S  Y +SKHALLG+V+S+C  LG YGIR
Sbjct: 124 KHAARSMVASGTRGSIVCTTSVTAEIGGPGPHS--YTASKHALLGLVRSACGGLGKYGIR 183

Query: 183 VNCVSPHGVATPLTFRIWNMEASE-IENMVASSANLKGVVLKTSHIAEAALFLASDESAY 242
           VN V+P+GVAT LT   +N E  + +E+  +++A LKGVVLK  H+A+AALFLASD+S Y
Sbjct: 184 VNGVAPYGVATGLT--SYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVY 243

Query: 243 VSGHNLVVDGGFSVVK 258
           +SG NL VDGG+SVVK
Sbjct: 244 ISGQNLGVDGGYSVVK 255

The following BLAST results are available for this feature:

BLAST of Sed0006758 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897308.1	7.2e-101	77.13	short-chain dehydrogenase reductase 3b-like [Benincasa hispida]	[more]
XP_022154244.1	5.7e-98	73.93	short-chain dehydrogenase reductase 3b-like, partial [Momordica charantia]	[more]
XP_022991626.1	5.7e-98	73.26	short-chain dehydrogenase reductase 3b-like [Cucurbita maxima]	[more]
KAG7014287.1	2.2e-97	74.22	Short-chain dehydrogenase reductase 3b, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_038899500.1	2.8e-97	72.09	short-chain dehydrogenase reductase 3b-like [Benincasa hispida]	[more]

BLAST of Sed0006758 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K41	5.4e-75	57.65	Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b ...	[more]
F4J2Z7	1.2e-71	57.87	Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE...	[more]
O80713	1.0e-70	56.25	Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a ...	[more]
F4J300	1.4e-70	56.64	Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE...	[more]
O80714	2.2e-68	52.76	Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c ...	[more]

BLAST of Sed0006758 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JR99	2.8e-98	73.26	short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1DLH0	2.8e-98	73.93	short-chain dehydrogenase reductase 3b-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1GRA5	4.0e-97	73.54	short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0K5W0	2.0e-96	73.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414470 PE=4 SV=1	[more]
A0A0A0KBA9	3.4e-96	71.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414480 PE=4 SV=1	[more]

BLAST of Sed0006758 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47140.1	3.8e-76	57.65	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.2	2.3e-73	58.04	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.1	8.8e-73	57.87	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47130.1	7.5e-72	56.25	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29260.1	9.7e-72	56.64	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 158..177 score: 29.57 coord: 217..237 score: 30.6 coord: 81..92 score: 55.67 coord: 9..26 score: 50.73 coord: 179..196 score: 43.6 coord: 130..146 score: 31.35
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 81..92 score: 49.08 coord: 136..144 score: 45.14 coord: 158..177 score: 27.28
None	No IPR available	GENE3D	3.40.50.720		coord: 1..258 e-value: 1.3E-73 score: 249.4
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 14..254 e-value: 8.7E-64 score: 215.3
None	No IPR available	PIRSR	PIRSR629511-2	PIRSR629511-2	coord: 5..253 e-value: 2.7E-29 score: 99.9
None	No IPR available	PIRSR	PIRSR000095-1	PIRSR000095-1	coord: 11..206 e-value: 1.7E-19 score: 67.9
None	No IPR available	PIRSR	PIRSR000094-3	PIRSR000094-3	coord: 5..256 e-value: 2.5E-17 score: 60.7
None	No IPR available	PANTHER	PTHR42820:SF16	SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B	coord: 3..258
None	No IPR available	PANTHER	PTHR42820	SHORT-CHAIN DEHYDROGENASE REDUCTASE	coord: 3..258
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 7..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006758.1	Sed0006758.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity