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Sed0006569 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAGGTGGTTTTGTTTTGGTGTTATGGATGATGTTGGCTGTTAGTATTGGCCTTGGGAAGAAGGGTTATGATGAGGAAGAAGTACCAAATAACATAGAAGAAATAGCAGTTAAAGTTACAGGAGGGGCATCATCCCGGCCTAACTCTAACTCGTACTGGGGCTGGAACTGGAACTGGAACTGGAAGGAGGAGGTTCAAAAAGTGGTCAATAAAGCCTACACCTATCTCTTTCCTCCCAAGATAGAGTCAGTACACGCACTCTTTTACACTACTACTCACTACTCGGTCTTTATATTAACCATTCACATTCATATTCATTAGGGTTTGGTTTTAGTTTCCGACCAGGAAAACCCGTGGAAGATGATGATGCACAAGTGAATATGAAGGAAGCCATCGCCAAGAGCTTCCACCACACCAAACAAATGGTGGAGGATTCTGCCAACGTTGCCGCCCAAACGCTTCAACAACCCAAACCACATTCAGAACTCTAA ATGAAGAAAGGTGGTTTTGTTTTGGTGTTATGGATGATGTTGGCTGTTAGTATTGGCCTTGGGAAGAAGGGTTATGATGAGGAAGAAGTACCAAATAACATAGAAGAAATAGCAGTTAAAGTTACAGGAGGGGCATCATCCCGGCCTAACTCTAACTCGTACTGGGGCTGGAACTGGAACTGGAACTGGAAGGAGGAGGTTCAAAAAGTGGTCAATAAAGCCTACACCTATCTCTTTCCTCCCAAGATAGATTTCCGACCAGGAAAACCCGTGGAAGATGATGATGCACAAGTGAATATGAAGGAAGCCATCGCCAAGAGCTTCCACCACACCAAACAAATGGTGGAGGATTCTGCCAACGTTGCCGCCCAAACGCTTCAACAACCCAAACCACATTCAGAACTCTAA ATGAAGAAAGGTGGTTTTGTTTTGGTGTTATGGATGATGTTGGCTGTTAGTATTGGCCTTGGGAAGAAGGGTTATGATGAGGAAGAAGTACCAAATAACATAGAAGAAATAGCAGTTAAAGTTACAGGAGGGGCATCATCCCGGCCTAACTCTAACTCGTACTGGGGCTGGAACTGGAACTGGAACTGGAAGGAGGAGGTTCAAAAAGTGGTCAATAAAGCCTACACCTATCTCTTTCCTCCCAAGATAGATTTCCGACCAGGAAAACCCGTGGAAGATGATGATGCACAAGTGAATATGAAGGAAGCCATCGCCAAGAGCTTCCACCACACCAAACAAATGGTGGAGGATTCTGCCAACGTTGCCGCCCAAACGCTTCAACAACCCAAACCACATTCAGAACTCTAA MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDDDAQVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL Homology
BLAST of Sed0006569 vs. NCBI nr
Match: KAG6571254.1 (hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29 Identity = 84/139 (60.43%), Postives = 95/139 (68.35%), Query Frame = 0
BLAST of Sed0006569 vs. NCBI nr
Match: KAG6571257.1 (hypothetical protein SDJN03_30172, partial [Cucurbita argyrosperma subsp. sororia] >KAG6571261.1 hypothetical protein SDJN03_30176, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 132.5 bits (332), Expect = 2.7e-27 Identity = 81/139 (58.27%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Sed0006569 vs. NCBI nr
Match: KAG6571255.1 (hypothetical protein SDJN03_30170, partial [Cucurbita argyrosperma subsp. sororia] >KAG6571258.1 hypothetical protein SDJN03_30173, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129.8 bits (325), Expect = 1.8e-26 Identity = 79/139 (56.83%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Sed0006569 vs. NCBI nr
Match: KAG6571256.1 (hypothetical protein SDJN03_30171, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 128.3 bits (321), Expect = 5.2e-26 Identity = 79/139 (56.83%), Postives = 91/139 (65.47%), Query Frame = 0
BLAST of Sed0006569 vs. NCBI nr
Match: XP_022948557.1 (uncharacterized protein LOC111452199 [Cucurbita moschata]) HSP 1 Score: 124.0 bits (310), Expect = 9.7e-25 Identity = 72/125 (57.60%), Postives = 86/125 (68.80%), Query Frame = 0
BLAST of Sed0006569 vs. ExPASy TrEMBL
Match: A0A6J1G9K3 (uncharacterized protein LOC111452199 OS=Cucurbita moschata OX=3662 GN=LOC111452199 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 4.7e-25 Identity = 72/125 (57.60%), Postives = 86/125 (68.80%), Query Frame = 0
BLAST of Sed0006569 vs. ExPASy TrEMBL
Match: A0A0A0L904 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642710 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 5.2e-24 Identity = 77/142 (54.23%), Postives = 89/142 (62.68%), Query Frame = 0
BLAST of Sed0006569 vs. ExPASy TrEMBL
Match: A0A5A7VE77 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00220 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 6.4e-22 Identity = 68/134 (50.75%), Postives = 83/134 (61.94%), Query Frame = 0
BLAST of Sed0006569 vs. ExPASy TrEMBL
Match: A0A1S3CDE0 (uncharacterized protein LOC103499155 OS=Cucumis melo OX=3656 GN=LOC103499155 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 6.4e-22 Identity = 68/134 (50.75%), Postives = 83/134 (61.94%), Query Frame = 0
BLAST of Sed0006569 vs. ExPASy TrEMBL
Match: A0A6J1D2A4 (uncharacterized protein LOC111016933 OS=Momordica charantia OX=3673 GN=LOC111016933 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.8e-06 Identity = 47/143 (32.87%), Postives = 66/143 (46.15%), Query Frame = 0
BLAST of Sed0006569 vs. TAIR 10
Match: AT1G16850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 4.1e-05 Identity = 30/118 (25.42%), Postives = 56/118 (47.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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