Sed0006488 (gene) Chayote v1

Overview


Name	Sed0006488
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor TCP5-like
Location	LG08: 1662057 .. 1663088 (+)
RNA-Seq Expression	Sed0006488
Synteny	Sed0006488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAAAATTCAAAAGAAAAGATGAGTTGTGAAGCAAAACAAGAAGGAATAATCAACGATGGAAAATATAGTTTCCCAAAAGCTCCAACAAGTTCAAGGCAATGGTCAGGTTTTAGAAATCCAAGAATTGTTAGGGTTTCTCGTTCCTTTGGAGGCAAAGATAGGCACAGCAAAGTTTGTACAATTAGGGGTTTGAGAGATAGAAGAATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTCGGCCAGCCTAGCAAGGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAAGCTTCCCCCTCTCCCGATCCCTACCGGATTCTCCCCCTTTCACGAACAGATGCTCTTCCCTCCTCAATTTGATCATAATCATAATTCTAGTACCACTTCCTCTTCTTCTCAATTTCCTCCGCTCCCTCCTCCGATCGCCCTCAAGGATCATTCTTCGATGGCGCTTATTGGGAATCATACGACCGCAATGGAAAAAACCAAGAATTGGGATATTATGGATTTAGGGCTACAAGAAAAAGCATCTTTGGCAAGGAAAGGGAAATGGATTGATGGAGGTAATAATATTCAACAAGTTGACCAAGATTACAATGAGCAAATTTCAACTCAAAAGCTCTTATCAAATATGATGAACAACAACCCTAATGCTTATAATTACATCACTTCCAATCAGACTTCACAATTTGGGAACAATATTGGAGTTTTTTCATCACAAAATGAGGCTCAAACAAGTTCATCTTCTAGTTCTTCACTTTTCTCTACTCCCTATGGTCCATACATCACCAACCCATTTGAAAGCCATATTCATTTCTTGAGCTCAAATTCCCATCCTAATTTGTCCAATTCCTTCATGTCTTCAGCTCTCCACCCTTTTGGCTCACAAAATTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTTTTCATGGCGACAATAACCACAACAGCTCTGGTAAAGACGGGGTGAACGGTAGCTCATAG

mRNA sequence

ATGATGAAAAATTCAAAAGAAAAGATGAGTTGTGAAGCAAAACAAGAAGGAATAATCAACGATGGAAAATATAGTTTCCCAAAAGCTCCAACAAGTTCAAGGCAATGGTCAGGTTTTAGAAATCCAAGAATTGTTAGGGTTTCTCGTTCCTTTGGAGGCAAAGATAGGCACAGCAAAGTTTGTACAATTAGGGGTTTGAGAGATAGAAGAATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTCGGCCAGCCTAGCAAGGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAAGCTTCCCCCTCTCCCGATCCCTACCGGATTCTCCCCCTTTCACGAACAGATGCTCTTCCCTCCTCAATTTGATCATAATCATAATTCTAGTACCACTTCCTCTTCTTCTCAATTTCCTCCGCTCCCTCCTCCGATCGCCCTCAAGGATCATTCTTCGATGGCGCTTATTGGGAATCATACGACCGCAATGGAAAAAACCAAGAATTGGGATATTATGGATTTAGGGCTACAAGAAAAAGCATCTTTGGCAAGGAAAGGGAAATGGATTGATGGAGGTAATAATATTCAACAAGTTGACCAAGATTACAATGAGCAAATTTCAACTCAAAAGCTCTTATCAAATATGATGAACAACAACCCTAATGCTTATAATTACATCACTTCCAATCAGACTTCACAATTTGGGAACAATATTGGAGTTTTTTCATCACAAAATGAGGCTCAAACAAGTTCATCTTCTAGTTCTTCACTTTTCTCTACTCCCTATGGTCCATACATCACCAACCCATTTGAAAGCCATATTCATTTCTTGAGCTCAAATTCCCATCCTAATTTGTCCAATTCCTTCATGTCTTCAGCTCTCCACCCTTTTGGCTCACAAAATTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTTTTCATGGCGACAATAACCACAACAGCTCTGGTAAAGACGGGGTGAACGGTAGCTCATAG

Coding sequence (CDS)

ATGATGAAAAATTCAAAAGAAAAGATGAGTTGTGAAGCAAAACAAGAAGGAATAATCAACGATGGAAAATATAGTTTCCCAAAAGCTCCAACAAGTTCAAGGCAATGGTCAGGTTTTAGAAATCCAAGAATTGTTAGGGTTTCTCGTTCCTTTGGAGGCAAAGATAGGCACAGCAAAGTTTGTACAATTAGGGGTTTGAGAGATAGAAGAATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTCGGCCAGCCTAGCAAGGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAAGCTTCCCCCTCTCCCGATCCCTACCGGATTCTCCCCCTTTCACGAACAGATGCTCTTCCCTCCTCAATTTGATCATAATCATAATTCTAGTACCACTTCCTCTTCTTCTCAATTTCCTCCGCTCCCTCCTCCGATCGCCCTCAAGGATCATTCTTCGATGGCGCTTATTGGGAATCATACGACCGCAATGGAAAAAACCAAGAATTGGGATATTATGGATTTAGGGCTACAAGAAAAAGCATCTTTGGCAAGGAAAGGGAAATGGATTGATGGAGGTAATAATATTCAACAAGTTGACCAAGATTACAATGAGCAAATTTCAACTCAAAAGCTCTTATCAAATATGATGAACAACAACCCTAATGCTTATAATTACATCACTTCCAATCAGACTTCACAATTTGGGAACAATATTGGAGTTTTTTCATCACAAAATGAGGCTCAAACAAGTTCATCTTCTAGTTCTTCACTTTTCTCTACTCCCTATGGTCCATACATCACCAACCCATTTGAAAGCCATATTCATTTCTTGAGCTCAAATTCCCATCCTAATTTGTCCAATTCCTTCATGTCTTCAGCTCTCCACCCTTTTGGCTCACAAAATTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTTTTCATGGCGACAATAACCACAACAGCTCTGGTAAAGACGGGGTGAACGGTAGCTCATAG

Protein sequence

MMKNSKEKMSCEAKQEGIINDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGFSPFHEQMLFPPQFDHNHNSSTTSSSSQFPPLPPPIALKDHSSMALIGNHTTAMEKTKNWDIMDLGLQEKASLARKGKWIDGGNNIQQVDQDYNEQISTQKLLSNMMNNNPNAYNYITSNQTSQFGNNIGVFSSQNEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNSFMSSALHPFGSQNLKPFPPNFNLKQLFHGDNNHNSSGKDGVNGSS

Homology

[Close]

BLAST of Sed0006488 vs. NCBI nr
Match: XP_022135226.1 (transcription factor TCP5-like [Momordica charantia])

HSP 1 Score: 422.9 bits (1086), Expect = 2.6e-114
Identity = 253/348 (72.70%), Postives = 273/348 (78.45%), Query Frame = 0


Query: 1   MMKNSKEKMSCEAKQEGIINDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKV 60
           M+++SKEK  CEAKQEGII DGKYSFP+APTSSRQWSGFRNPRIVRVSRSFGGKDRHSKV
Sbjct: 1   MLRDSKEK-GCEAKQEGII-DGKYSFPRAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKV 60

Query: 61  CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGF 120
           CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IP GF
Sbjct: 61  CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGF 120

Query: 121 SPFHEQM-LFPPQFDHNHNSSTTSSSSQFPPLPPPIALKDHSSMALIGNHTTAMEKTKNW 180
           S FH  M LFP Q+D+     ++SSSSQF  LP P A+    S     N TT MEKTK W
Sbjct: 121 SQFHHPMSLFPAQYDY-----SSSSSSQFCSLPHPFAVDTKDSTTTHLNQTT-MEKTKLW 180

Query: 181 DIMDLGLQEKASLARKGKWIDGGNNIQQVDQDYNEQISTQKLLSNMMNNNPNAYNYIT-S 240
           D  DL  QEKASLA KGKWID G+N QQV +DYNEQIS QK +S  +NN  N+Y+Y T  
Sbjct: 181 D-TDLVPQEKASLATKGKWIDHGSNSQQV-EDYNEQISAQKFIS--INNYSNSYHYNTCD 240

Query: 241 NQTSQFG-NNIGVFSSQNEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSN 300
           +Q SQFG NN GVF SQ EAQTSSSS S+LF TPY  YITNPFESHIHFLSSNSH  L N
Sbjct: 241 HQHSQFGNNNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHA-LPN 300

Query: 301 SFM--SSALHPFGSQNLKPFPPNFNLKQLFHGDNNHNSSGKDGVNGSS 344
            FM  +S L PFGSQNLKPFP NFNLKQL H       SGKDG +G+S
Sbjct: 301 PFMPPNSPLQPFGSQNLKPFPANFNLKQLLH----DGGSGKDGADGNS 331

[Close]

BLAST of Sed0006488 vs. NCBI nr
Match: XP_038879592.1 (transcription factor TCP5-like [Benincasa hispida])

HSP 1 Score: 398.3 bits (1022), Expect = 6.8e-107
Identity = 246/381 (64.57%), Postives = 272/381 (71.39%), Query Frame = 0


Query: 1   MMKNSKEKMSCEAKQEGI-----INDGKYSFPK-APTSSRQWSGFRNPRIVRVSRSFGGK 60
           +  NS ++  CEAK+EGI      +DGKYSF K A TSSRQWSGFRNPRIVRVSRSFGGK
Sbjct: 2   LRNNSSKEKGCEAKEEGIRSSNNNDDGKYSFSKAASTSSRQWSGFRNPRIVRVSRSFGGK 61

Query: 61  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL 120
           DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPPL
Sbjct: 62  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 121

Query: 121 PIPTGFSPFHEQMLFPPQFDHNHNSSTTSSSSQF-----PPLPPPIALKDHSSMALIGNH 180
            IP GFSPFH+QMLFP    H+H  ST+SSSS+      PP PPP    D   +      
Sbjct: 122 QIPPGFSPFHQQMLFPQYDPHHHYYSTSSSSSRLCNSLPPPPPPPSFALDVKGIDAY-QT 181

Query: 181 TTAMEKTKNWDIMDLGLQEKASLA----RKGKWIDGGN--NIQQVDQDYNEQISTQKLLS 240
           T  +EKTK WD+ DLGLQEKA+ A     KGKWIDG N  N QQV +DYNEQIS+QKLLS
Sbjct: 182 TMTVEKTKLWDV-DLGLQEKAAAATTATTKGKWIDGSNTTNSQQV-EDYNEQISSQKLLS 241

Query: 241 ---------NMMNNNPNAY-NYITSNQTSQFGNN----IGVFSSQ-----NEAQTSSSSS 300
                    NMMNNN   Y NY +    SQFGNN     G F SQ      +  TSSSS+
Sbjct: 242 MAICSSNLPNMMNNNSTPYNNYNSCLSLSQFGNNNNDDNGNFPSQLVEAAAQTSTSSSSN 301

Query: 301 SSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNSFM-SSALHPFGSQNLKPF-PPNFNLK 344
           SSLF TPY  YITNPFESHIHFLSSNSH NLSN FM +S+LHPF SQNLKPF PP+FNLK
Sbjct: 302 SSLFFTPYASYITNPFESHIHFLSSNSHVNLSNPFMPNSSLHPFASQNLKPFPPPSFNLK 361

[Close]

BLAST of Sed0006488 vs. NCBI nr
Match: XP_011648477.1 (transcription factor TCP5 [Cucumis sativus] >KGN63734.1 hypothetical protein Csa_014083 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-104
Identity = 253/404 (62.62%), Postives = 279/404 (69.06%), Query Frame = 0


Query: 1   MMKNSKEKMSCEAKQEGII--------NDGKYSFPKAPT-SSRQWSGFRNPRIVRVSRSF 60
           +  NSK++  CEAK+EG++        NDGKYSFPKAPT SSRQWSGFRNPRIVRVSRSF
Sbjct: 2   LRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSF 61

Query: 61  GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKL 120
           GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID L
Sbjct: 62  GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNL 121

Query: 121 PPLPIPTGFSPFHEQMLFPPQFDHNH--------NSSTTSSSSQF-PPLPPPIALKDHSS 180
           PPL IP GFSPFH+QMLFP   D +H        +SS++SSSS+F   LPPP  L   S+
Sbjct: 122 PPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKST 181

Query: 181 MALIGNHTTAMEKTKNWDIMDLG-LQEKASLA------RKGKWIDGGNN----IQQVDQD 240
            A     T  +EKTK WD MDL  LQ+KA  A       KGKWIDG NN     QQV +D
Sbjct: 182 DAY--QTTMTVEKTKLWD-MDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQV-ED 241

Query: 241 YNEQISTQKLLS---------NMMNNNPNA-YNYITSN------------QTSQFGNN-- 300
           YNEQIS+QKLLS         NMMNNN +  YN   S+              SQFGNN  
Sbjct: 242 YNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNN 301

Query: 301 -IGVFSSQ-----NEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNSFMS 344
             GVF SQ      +   SSSSSSSLF TPY  YITNPFESHIHFLSSNSH  LSN FMS
Sbjct: 302 SNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHA-LSNPFMS 361

[Close]

BLAST of Sed0006488 vs. NCBI nr
Match: KAA0057999.1 (transcription factor TCP5 [Cucumis melo var. makuwa])

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-102
Identity = 251/398 (63.07%), Postives = 274/398 (68.84%), Query Frame = 0


Query: 4   NSKEKMSCEAKQEGII--------NDGKYSFPKAPT-SSRQWSGFRNPRIVRVSRSFGGK 63
           NSK++   EAK+EGI         NDGKYSFPKAPT SSRQWSGFRNPRIVRVSRSFGGK
Sbjct: 6   NSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGK 65

Query: 64  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL 123
           DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPPL
Sbjct: 66  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 125

Query: 124 PIPTGFSPFHEQMLFPPQFD---HNHNSSTTSSSSQF-PPLPPPIALKDHSSMALIGNHT 183
            IP GFSPFH+QMLFP   D   H + SS++SSSS+F    PPP  L   S+ A     T
Sbjct: 126 QIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKSTDAY--QTT 185

Query: 184 TAMEKTKNWDIMDLG-LQEKASLA------RKGKWIDGGNN----IQQVDQDYNEQISTQ 243
             +EKTK WD MDL  L EKA  A       KGKWIDG NN     QQV +DYNEQIS+Q
Sbjct: 186 MTVEKTKLWD-MDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQV-EDYNEQISSQ 245

Query: 244 KLLS---------NMMNNNPNA-YNYITSN-------------QTSQFGNN---IGVFSS 303
           KLLS         NMMNNN +  YN   S+               SQFGNN    G+F S
Sbjct: 246 KLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNSNGIFPS 305

Query: 304 Q-----NEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNSFMSSALHPFG 344
           Q       + +SSSSSSSLF TPY  YITNPFESHIHFLSSNSH   +N FMSS+LHPF 
Sbjct: 306 QLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSSSLHPFA 365

[Close]

BLAST of Sed0006488 vs. NCBI nr
Match: XP_008453284.1 (PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: transcription factor TCP5 [Cucumis melo])

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-102
Identity = 251/398 (63.07%), Postives = 274/398 (68.84%), Query Frame = 0


Query: 4   NSKEKMSCEAKQEGII--------NDGKYSFPKAPT-SSRQWSGFRNPRIVRVSRSFGGK 63
           NSK++   EAK+EGI         NDGKYSFPKAPT SSRQWSGFRNPRIVRVSRSFGGK
Sbjct: 14  NSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGK 73

Query: 64  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL 123
           DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPPL
Sbjct: 74  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 133

Query: 124 PIPTGFSPFHEQMLFPPQFD---HNHNSSTTSSSSQF-PPLPPPIALKDHSSMALIGNHT 183
            IP GFSPFH+QMLFP   D   H + SS++SSSS+F    PPP  L   S+ A     T
Sbjct: 134 QIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKSTDAY--QTT 193

Query: 184 TAMEKTKNWDIMDLG-LQEKASLA------RKGKWIDGGNN----IQQVDQDYNEQISTQ 243
             +EKTK WD MDL  L EKA  A       KGKWIDG NN     QQV +DYNEQIS+Q
Sbjct: 194 MTVEKTKLWD-MDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQV-EDYNEQISSQ 253

Query: 244 KLLS---------NMMNNNPNA-YNYITSN-------------QTSQFGNN---IGVFSS 303
           KLLS         NMMNNN +  YN   S+               SQFGNN    G+F S
Sbjct: 254 KLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNSNGIFPS 313

Query: 304 Q-----NEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNSFMSSALHPFG 344
           Q       + +SSSSSSSLF TPY  YITNPFESHIHFLSSNSH   +N FMSS+LHPF 
Sbjct: 314 QLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSSSLHPFA 373

[Close]

BLAST of Sed0006488 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.2e-43
Identity = 133/337 (39.47%), Postives = 177/337 (52.52%), Query Frame = 0


Query: 27  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 86
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 87  DKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGFSPFHEQMLFPPQFDHNHNSSTTSSS 146
           D+L L QPSKVIDWLL+  K D+DKLPPL  P GF+  +  ++F         SSTTS++
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTT 155

Query: 147 SQFPPLPPPIALKDHSSMALIGNHTTAMEKTKNWDIMDLGLQEKASL-ARKGKWIDGGNN 206
             FP           +++  + N            + D    ++ S    KGKWI    N
Sbjct: 156 --FP----------GTNLGFLENWDLGGSSRTRARLTDTTTTQRESFDLDKGKWIKNDEN 215

Query: 207 IQQVDQDYNEQISTQKLLSNMMNNNPNAYNYITSNQT-SQFGNNIGVFSSQNEA------ 266
             Q  Q +N     Q  L+N  NN    YN     Q+  Q GNN+ V  S   A      
Sbjct: 216 SNQDHQGFNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNL 275

Query: 267 -----QTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNL-----------SNSFMS 326
                 +S+   S LF  P  P +++ F ++  FL ++ H ++           SNS  +
Sbjct: 276 NLHPPSSSAGDGSQLFFGPTPPAMSSLFPTYPSFLGASHHHHVVDGAGHLQLFSSNSNTA 335

Query: 327 SALH--PFGSQNLKPFPPNFNLKQLFHGDNNHNSSGK 337
           S  H  P  +  ++PF    +L    H  ++H+S  +
Sbjct: 336 SQQHMMPGNTSLIRPF---HHLMSSNHDTDHHSSDNE 357

[Close]

BLAST of Sed0006488 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.8e-33
Identity = 75/132 (56.82%), Postives = 91/132 (68.94%), Query Frame = 0


Query: 3   KNSKEKMSCEAKQEGIINDGKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           +  +E    + + E     GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPLPI P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSPFHEQMLF 130
             FS F+    F
Sbjct: 140 ENFSIFNHHQSF 151

[Close]

BLAST of Sed0006488 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-30
Identity = 94/252 (37.30%), Postives = 129/252 (51.19%), Query Frame = 0


Query: 39  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 98
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 99  WLLDVTKLDIDKLPPLPIPTGFSPFHEQMLFPPQFDHNHNSSTTSSSSQFPPLPPPIALK 158
           WLL+V K D+D LPPL  P GF              H  N + T     FP         
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF--------------HQLNPNLTGLGESFP--------- 138

Query: 159 DHSSMALIGNHTTAMEKTKNWDIMDLGLQEKASL-ARKGKWIDGGNNIQQVD--QDYNEQ 218
                                 + DLG  ++ +L   K KW++  +    +D    ++  
Sbjct: 139 ---------------------GVFDLGRTQREALDLEKRKWVNLDHVFDHIDHHNHFSNS 198

Query: 219 ISTQKLLSNMMNNNPNAYNY-----------ITSNQTSQFGNNIGVFSSQNEAQTSSSSS 277
           I + KL    + ++ ++Y+Y            + N T  F NN   +++ N    ++ + 
Sbjct: 199 IQSNKLYFPTITSSSSSYHYNLGHLQQSLLDQSGNVTVAFSNN---YNNNNLNPPAAETM 223

[Close]

BLAST of Sed0006488 vs. ExPASy Swiss-Prot
Match: A2ZMR9 (Transcription factor PCF8 OS=Oryza sativa subsp. indica OX=39946 GN=PCF8 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.2e-17
Identity = 52/110 (47.27%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 37  SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKV 96
           + +R  R+ R +   GGKDRHSKV T RGLRDRR+RLSVPTAI  YD+QD+L + QPSK 
Sbjct: 32  AAWRTSRVARAAA--GGKDRHSKVVTSRGLRDRRVRLSVPTAIAFYDIQDRLGVDQPSKA 91

Query: 97  IDWLLDVTKLDIDKLPPLPIPTGFSPFHEQMLFPPQFDHNHNSSTTSSSS 147
           I+WL+      ID LP L               P   D   ++S TS SS
Sbjct: 92  IEWLIRAAAAAIDALPSLDCSFALPAAASSPPPPAADDAEVSTSETSKSS 139

[Close]

BLAST of Sed0006488 vs. ExPASy Swiss-Prot
Match: Q2QM59 (Transcription factor PCF8 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF8 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.2e-17
Identity = 52/110 (47.27%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 37  SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKV 96
           + +R  R+ R +   GGKDRHSKV T RGLRDRR+RLSVPTAI  YD+QD+L + QPSK 
Sbjct: 32  AAWRTSRVARAAA--GGKDRHSKVVTSRGLRDRRVRLSVPTAIAFYDIQDRLGVDQPSKA 91

Query: 97  IDWLLDVTKLDIDKLPPLPIPTGFSPFHEQMLFPPQFDHNHNSSTTSSSS 147
           I+WL+      ID LP L               P   D   ++S TS SS
Sbjct: 92  IEWLIRAAAAAIDALPSLDCSFALPAAASSPPPPAADDAEVSTSETSKSS 139

[Close]

BLAST of Sed0006488 vs. ExPASy TrEMBL
Match: A0A6J1C023 (transcription factor TCP5-like OS=Momordica charantia OX=3673 GN=LOC111007241 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 1.2e-114
Identity = 253/348 (72.70%), Postives = 273/348 (78.45%), Query Frame = 0


Query: 1   MMKNSKEKMSCEAKQEGIINDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKV 60
           M+++SKEK  CEAKQEGII DGKYSFP+APTSSRQWSGFRNPRIVRVSRSFGGKDRHSKV
Sbjct: 1   MLRDSKEK-GCEAKQEGII-DGKYSFPRAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKV 60

Query: 61  CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGF 120
           CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IP GF
Sbjct: 61  CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGF 120

Query: 121 SPFHEQM-LFPPQFDHNHNSSTTSSSSQFPPLPPPIALKDHSSMALIGNHTTAMEKTKNW 180
           S FH  M LFP Q+D+     ++SSSSQF  LP P A+    S     N TT MEKTK W
Sbjct: 121 SQFHHPMSLFPAQYDY-----SSSSSSQFCSLPHPFAVDTKDSTTTHLNQTT-MEKTKLW 180

Query: 181 DIMDLGLQEKASLARKGKWIDGGNNIQQVDQDYNEQISTQKLLSNMMNNNPNAYNYIT-S 240
           D  DL  QEKASLA KGKWID G+N QQV +DYNEQIS QK +S  +NN  N+Y+Y T  
Sbjct: 181 D-TDLVPQEKASLATKGKWIDHGSNSQQV-EDYNEQISAQKFIS--INNYSNSYHYNTCD 240

Query: 241 NQTSQFG-NNIGVFSSQNEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSN 300
           +Q SQFG NN GVF SQ EAQTSSSS S+LF TPY  YITNPFESHIHFLSSNSH  L N
Sbjct: 241 HQHSQFGNNNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHA-LPN 300

Query: 301 SFM--SSALHPFGSQNLKPFPPNFNLKQLFHGDNNHNSSGKDGVNGSS 344
            FM  +S L PFGSQNLKPFP NFNLKQL H       SGKDG +G+S
Sbjct: 301 PFMPPNSPLQPFGSQNLKPFPANFNLKQLLH----DGGSGKDGADGNS 331

[Close]

BLAST of Sed0006488 vs. ExPASy TrEMBL
Match: A0A0A0LRU6 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 5.3e-105
Identity = 253/404 (62.62%), Postives = 279/404 (69.06%), Query Frame = 0


Query: 1   MMKNSKEKMSCEAKQEGII--------NDGKYSFPKAPT-SSRQWSGFRNPRIVRVSRSF 60
           +  NSK++  CEAK+EG++        NDGKYSFPKAPT SSRQWSGFRNPRIVRVSRSF
Sbjct: 2   LRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSF 61

Query: 61  GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKL 120
           GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID L
Sbjct: 62  GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNL 121

Query: 121 PPLPIPTGFSPFHEQMLFPPQFDHNH--------NSSTTSSSSQF-PPLPPPIALKDHSS 180
           PPL IP GFSPFH+QMLFP   D +H        +SS++SSSS+F   LPPP  L   S+
Sbjct: 122 PPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKST 181

Query: 181 MALIGNHTTAMEKTKNWDIMDLG-LQEKASLA------RKGKWIDGGNN----IQQVDQD 240
            A     T  +EKTK WD MDL  LQ+KA  A       KGKWIDG NN     QQV +D
Sbjct: 182 DAY--QTTMTVEKTKLWD-MDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQV-ED 241

Query: 241 YNEQISTQKLLS---------NMMNNNPNA-YNYITSN------------QTSQFGNN-- 300
           YNEQIS+QKLLS         NMMNNN +  YN   S+              SQFGNN  
Sbjct: 242 YNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNN 301

Query: 301 -IGVFSSQ-----NEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNSFMS 344
             GVF SQ      +   SSSSSSSLF TPY  YITNPFESHIHFLSSNSH  LSN FMS
Sbjct: 302 SNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHA-LSNPFMS 361

[Close]

BLAST of Sed0006488 vs. ExPASy TrEMBL
Match: A0A1S3BX07 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 6.4e-103
Identity = 251/398 (63.07%), Postives = 274/398 (68.84%), Query Frame = 0


Query: 4   NSKEKMSCEAKQEGII--------NDGKYSFPKAPT-SSRQWSGFRNPRIVRVSRSFGGK 63
           NSK++   EAK+EGI         NDGKYSFPKAPT SSRQWSGFRNPRIVRVSRSFGGK
Sbjct: 14  NSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGK 73

Query: 64  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL 123
           DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPPL
Sbjct: 74  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 133

Query: 124 PIPTGFSPFHEQMLFPPQFD---HNHNSSTTSSSSQF-PPLPPPIALKDHSSMALIGNHT 183
            IP GFSPFH+QMLFP   D   H + SS++SSSS+F    PPP  L   S+ A     T
Sbjct: 134 QIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKSTDAY--QTT 193

Query: 184 TAMEKTKNWDIMDLG-LQEKASLA------RKGKWIDGGNN----IQQVDQDYNEQISTQ 243
             +EKTK WD MDL  L EKA  A       KGKWIDG NN     QQV +DYNEQIS+Q
Sbjct: 194 MTVEKTKLWD-MDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQV-EDYNEQISSQ 253

Query: 244 KLLS---------NMMNNNPNA-YNYITSN-------------QTSQFGNN---IGVFSS 303
           KLLS         NMMNNN +  YN   S+               SQFGNN    G+F S
Sbjct: 254 KLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNSNGIFPS 313

Query: 304 Q-----NEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNSFMSSALHPFG 344
           Q       + +SSSSSSSLF TPY  YITNPFESHIHFLSSNSH   +N FMSS+LHPF 
Sbjct: 314 QLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSSSLHPFA 373

[Close]

BLAST of Sed0006488 vs. ExPASy TrEMBL
Match: A0A5A7UWW8 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003030 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 6.4e-103
Identity = 251/398 (63.07%), Postives = 274/398 (68.84%), Query Frame = 0


Query: 4   NSKEKMSCEAKQEGII--------NDGKYSFPKAPT-SSRQWSGFRNPRIVRVSRSFGGK 63
           NSK++   EAK+EGI         NDGKYSFPKAPT SSRQWSGFRNPRIVRVSRSFGGK
Sbjct: 6   NSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGK 65

Query: 64  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL 123
           DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPPL
Sbjct: 66  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 125

Query: 124 PIPTGFSPFHEQMLFPPQFD---HNHNSSTTSSSSQF-PPLPPPIALKDHSSMALIGNHT 183
            IP GFSPFH+QMLFP   D   H + SS++SSSS+F    PPP  L   S+ A     T
Sbjct: 126 QIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKSTDAY--QTT 185

Query: 184 TAMEKTKNWDIMDLG-LQEKASLA------RKGKWIDGGNN----IQQVDQDYNEQISTQ 243
             +EKTK WD MDL  L EKA  A       KGKWIDG NN     QQV +DYNEQIS+Q
Sbjct: 186 MTVEKTKLWD-MDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQV-EDYNEQISSQ 245

Query: 244 KLLS---------NMMNNNPNA-YNYITSN-------------QTSQFGNN---IGVFSS 303
           KLLS         NMMNNN +  YN   S+               SQFGNN    G+F S
Sbjct: 246 KLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNSNGIFPS 305

Query: 304 Q-----NEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNSFMSSALHPFG 344
           Q       + +SSSSSSSLF TPY  YITNPFESHIHFLSSNSH   +N FMSS+LHPF 
Sbjct: 306 QLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSSSLHPFA 365

[Close]

BLAST of Sed0006488 vs. ExPASy TrEMBL
Match: A0A6J1JE53 (transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 1.2e-101
Identity = 229/348 (65.80%), Postives = 251/348 (72.13%), Query Frame = 0


Query: 1   MMKNSKEKMSCEAKQEGIINDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKV 60
           M++NSKEK   E+K+E     GKY FPKAPTSS QWSGFRNPRIVRVSRSFGGKDRHSKV
Sbjct: 1   MLRNSKEK-GFESKEE-----GKYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKDRHSKV 60

Query: 61  CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGF 120
           CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IPTGF
Sbjct: 61  CTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGF 120

Query: 121 SPFHEQMLFPPQFD-HNHNSSTTSSSSQF-PPLPPPIALKDHSSMALIGNHTTAMEKTKN 180
           SPFH+QM FPP  D H+H+  ++SSSSQF   LPPP A+          + +TA+EKTK 
Sbjct: 121 SPFHQQMFFPPYDDQHHHHHHSSSSSSQFCNSLPPPFAVNVKGD-----SSSTAVEKTKI 180

Query: 181 WDIMDLGLQEKASLARKGKWIDGGNNIQQVDQDYNEQISTQKLLSNMMNNNPNAYNYITS 240
           WD MDL LQ KAS   KGKWIDG +N  Q  +DYN                   +    S
Sbjct: 181 WD-MDLALQGKASSLTKGKWIDGSSN--QHVEDYN-------------------FTPYNS 240

Query: 241 NQTSQFGNNIGVFSSQNEAQTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNLSNS 300
             +SQFGNN GVF SQ EA TSSSS+S+LF TPY  YITNPFESHIHFLSSNSH  LSN 
Sbjct: 241 YNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHA-LSNP 300

Query: 301 FMSSALHPFGSQNLKPF-PPNFNLKQLFHG--DNNHNSSGKDGVNGSS 344
           F+ SALHPF SQNLKPF   +FN KQL H    N  + S KDG  G S
Sbjct: 301 FVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGAAGDS 314

[Close]

BLAST of Sed0006488 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 176.0 bits (445), Expect = 5.1e-44
Identity = 133/337 (39.47%), Postives = 177/337 (52.52%), Query Frame = 0


Query: 27  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 86
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 87  DKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGFSPFHEQMLFPPQFDHNHNSSTTSSS 146
           D+L L QPSKVIDWLL+  K D+DKLPPL  P GF+  +  ++F         SSTTS++
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTT 155

Query: 147 SQFPPLPPPIALKDHSSMALIGNHTTAMEKTKNWDIMDLGLQEKASL-ARKGKWIDGGNN 206
             FP           +++  + N            + D    ++ S    KGKWI    N
Sbjct: 156 --FP----------GTNLGFLENWDLGGSSRTRARLTDTTTTQRESFDLDKGKWIKNDEN 215

Query: 207 IQQVDQDYNEQISTQKLLSNMMNNNPNAYNYITSNQT-SQFGNNIGVFSSQNEA------ 266
             Q  Q +N     Q  L+N  NN    YN     Q+  Q GNN+ V  S   A      
Sbjct: 216 SNQDHQGFNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNL 275

Query: 267 -----QTSSSSSSSLFSTPYGPYITNPFESHIHFLSSNSHPNL-----------SNSFMS 326
                 +S+   S LF  P  P +++ F ++  FL ++ H ++           SNS  +
Sbjct: 276 NLHPPSSSAGDGSQLFFGPTPPAMSSLFPTYPSFLGASHHHHVVDGAGHLQLFSSNSNTA 335

Query: 327 SALH--PFGSQNLKPFPPNFNLKQLFHGDNNHNSSGK 337
           S  H  P  +  ++PF    +L    H  ++H+S  +
Sbjct: 336 SQQHMMPGNTSLIRPF---HHLMSSNHDTDHHSSDNE 357

[Close]

BLAST of Sed0006488 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 142.5 bits (358), Expect = 6.3e-34
Identity = 75/132 (56.82%), Postives = 91/132 (68.94%), Query Frame = 0


Query: 3   KNSKEKMSCEAKQEGIINDGKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           +  +E    + + E     GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPLPI P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSPFHEQMLF 130
             FS F+    F
Sbjct: 140 ENFSIFNHHQSF 151

[Close]

BLAST of Sed0006488 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 142.5 bits (358), Expect = 6.3e-34
Identity = 75/132 (56.82%), Postives = 91/132 (68.94%), Query Frame = 0


Query: 3   KNSKEKMSCEAKQEGIINDGKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           +  +E    + + E     GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPLPI P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSPFHEQMLF 130
             FS F+    F
Sbjct: 140 ENFSIFNHHQSF 151

[Close]

BLAST of Sed0006488 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-31
Identity = 94/252 (37.30%), Postives = 129/252 (51.19%), Query Frame = 0


Query: 39  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 98
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 99  WLLDVTKLDIDKLPPLPIPTGFSPFHEQMLFPPQFDHNHNSSTTSSSSQFPPLPPPIALK 158
           WLL+V K D+D LPPL  P GF              H  N + T     FP         
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF--------------HQLNPNLTGLGESFP--------- 138

Query: 159 DHSSMALIGNHTTAMEKTKNWDIMDLGLQEKASL-ARKGKWIDGGNNIQQVD--QDYNEQ 218
                                 + DLG  ++ +L   K KW++  +    +D    ++  
Sbjct: 139 ---------------------GVFDLGRTQREALDLEKRKWVNLDHVFDHIDHHNHFSNS 198

Query: 219 ISTQKLLSNMMNNNPNAYNY-----------ITSNQTSQFGNNIGVFSSQNEAQTSSSSS 277
           I + KL    + ++ ++Y+Y            + N T  F NN   +++ N    ++ + 
Sbjct: 199 IQSNKLYFPTITSSSSSYHYNLGHLQQSLLDQSGNVTVAFSNN---YNNNNLNPPAAETM 223

[Close]

BLAST of Sed0006488 vs. TAIR 10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 )

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17
Identity = 89/288 (30.90%), Postives = 123/288 (42.71%), Query Frame = 0


Query: 34  RQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQP 93
           R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L   QP
Sbjct: 32  RNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 91

Query: 94  SKVIDWLLDVTKLDIDKLPPLPIPTGFSPFHEQMLFPPQFDH-----NHNSSTTSSSSQF 153
           SK ++WL++     I  LP               L    FDH     N   S  SS +  
Sbjct: 92  SKAVEWLINAASDSITDLP---------------LLNTNFDHLDQNQNQTKSACSSGTSE 151

Query: 154 PPLPPPIALKDHSSMALIGNHTTAMEKTKN--------WDIMDLGLQEKASLARKGKWID 213
             L      +            TA ++ K+          ++  G  ++ S      W  
Sbjct: 152 SSLLSLSRTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFDQQPS---NRNWTG 211

Query: 214 GGNNIQQVD-------------------QDYNEQISTQKLLSNMMNNNPNAYNYITSNQT 273
           G +    V                     DYN  IS+    S+ +N   ++   + SN  
Sbjct: 212 GSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSS---SSAINGGYSSRGTLQSNSQ 271

Query: 274 SQFGNNIGVFSSQNEAQTSSSSSSSLFSTPYGPYITN--PFESHIHFL 288
           S F NN    + ++   +SSSSSS + S     ++    P + H H L
Sbjct: 272 SLFLNNNNNITQRSSISSSSSSSSPMDSQSISFFMATPPPLDHHNHQL 297

The following BLAST results are available for this feature:

BLAST of Sed0006488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135226.1	2.6e-114	72.70	transcription factor TCP5-like [Momordica charantia]	[more]
XP_038879592.1	6.8e-107	64.57	transcription factor TCP5-like [Benincasa hispida]	[more]
XP_011648477.1	1.1e-104	62.62	transcription factor TCP5 [Cucumis sativus] >KGN63734.1 hypothetical protein Csa...	[more]
KAA0057999.1	1.3e-102	63.07	transcription factor TCP5 [Cucumis melo var. makuwa]	[more]
XP_008453284.1	1.3e-102	63.07	PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: t...	[more]

BLAST of Sed0006488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	7.2e-43	39.47	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9S7W5	8.8e-33	56.82	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9LEZ9	1.4e-30	37.30	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
A2ZMR9	5.2e-17	47.27	Transcription factor PCF8 OS=Oryza sativa subsp. indica OX=39946 GN=PCF8 PE=4 SV...	[more]
Q2QM59	5.2e-17	47.27	Transcription factor PCF8 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF8 PE=2 ...	[more]

BLAST of Sed0006488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C023	1.2e-114	72.70	transcription factor TCP5-like OS=Momordica charantia OX=3673 GN=LOC111007241 PE...	[more]
A0A0A0LRU6	5.3e-105	62.62	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV...	[more]
A0A1S3BX07	6.4e-103	63.07	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]
A0A5A7UWW8	6.4e-103	63.07	Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1JE53	1.2e-101	65.80	transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 ...	[more]

BLAST of Sed0006488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	5.1e-44	39.47	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.1	6.3e-34	56.82	plastid transcription factor 1	[more]
AT3G02150.2	6.3e-34	56.82	plastid transcription factor 1	[more]
AT5G08070.1	1.0e-31	37.30	TCP domain protein 17	[more]
AT1G30210.1	1.1e-17	30.90	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 53..178 e-value: 3.0E-23 score: 83.1
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 53..111 score: 26.691658
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..343
None	No IPR available	PANTHER	PTHR31072:SF168	TRANSCRIPTION FACTOR TCP5	coord: 3..341
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 3..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006488.1	Sed0006488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding