Sed0006471 (gene) Chayote v1

Overview


Name	Sed0006471
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Stigma-specific STIG1-like protein 4
Location	LG07: 42161790 .. 42162212 (-)
RNA-Seq Expression	Sed0006471
Synteny	Sed0006471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCTCTCCATCTTCACCACAATCTTAGCTCATGTTTCCCTTCTCCTCTCCATTTCTTTCCTCATCCAAGCCCAAGACTTATCCCCTTCCCTTTGGCTAAACAACAAGCTCGACGTTAACGACGACAACAACGAGTTCTCAAAGCATAGTTCATGCTCTGCGAAACGACATTTCTGCTGGAAAGACGAAGACGATGAGCCAAAGCGGAAGAAGCTCATGAAGTGCTGCAACCGCCGATGCGTCGACTTTCGTTCCGACGTCAAAAACTGCGGTTTTTGTGGTAAAATCTGCCCGTTTCCACAACAATGCTGCAAAGGTTTCTGTGTTGATACAAACAACAGTCGATTTAACTGTGGACGATGTGGGAATAAATGTCGTTTTCGTGTTCGTTGTGTTTATGGCATGTGTGGATATGGTTAG

mRNA sequence

ATGCATCTCTCCATCTTCACCACAATCTTAGCTCATGTTTCCCTTCTCCTCTCCATTTCTTTCCTCATCCAAGCCCAAGACTTATCCCCTTCCCTTTGGCTAAACAACAAGCTCGACGTTAACGACGACAACAACGAGTTCTCAAAGCATAGTTCATGCTCTGCGAAACGACATTTCTGCTGGAAAGACGAAGACGATGAGCCAAAGCGGAAGAAGCTCATGAAGTGCTGCAACCGCCGATGCGTCGACTTTCGTTCCGACGTCAAAAACTGCGGTTTTTGTGGTAAAATCTGCCCGTTTCCACAACAATGCTGCAAAGGTTTCTGTGTTGATACAAACAACAGTCGATTTAACTGTGGACGATGTGGGAATAAATGTCGTTTTCGTGTTCGTTGTGTTTATGGCATGTGTGGATATGGTTAG

Coding sequence (CDS)

ATGCATCTCTCCATCTTCACCACAATCTTAGCTCATGTTTCCCTTCTCCTCTCCATTTCTTTCCTCATCCAAGCCCAAGACTTATCCCCTTCCCTTTGGCTAAACAACAAGCTCGACGTTAACGACGACAACAACGAGTTCTCAAAGCATAGTTCATGCTCTGCGAAACGACATTTCTGCTGGAAAGACGAAGACGATGAGCCAAAGCGGAAGAAGCTCATGAAGTGCTGCAACCGCCGATGCGTCGACTTTCGTTCCGACGTCAAAAACTGCGGTTTTTGTGGTAAAATCTGCCCGTTTCCACAACAATGCTGCAAAGGTTTCTGTGTTGATACAAACAACAGTCGATTTAACTGTGGACGATGTGGGAATAAATGTCGTTTTCGTGTTCGTTGTGTTTATGGCATGTGTGGATATGGTTAG

Protein sequence

MHLSIFTTILAHVSLLLSISFLIQAQDLSPSLWLNNKLDVNDDNNEFSKHSSCSAKRHFCWKDEDDEPKRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCVYGMCGYG

Homology

[Close]

BLAST of Sed0006471 vs. NCBI nr
Match: XP_038900147.1 (stigma-specific STIG1-like protein 1 [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42
Identity = 92/141 (65.25%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 8   TILAHVSLLLSISF--LIQAQDLSPSLWLNNKLDVND------DNNEFSKHSSCSAKRHF 67
           T LAH+ LL+S+SF  +I+A+D SP  WL  KL+ ND      ++N F+KH  CS K+ F
Sbjct: 5   TFLAHIFLLISLSFFIIIEAEDFSP--WLKGKLEDNDNEIDSNNHNRFTKH-DCSGKQIF 64

Query: 68  CWK-DEDDEPKRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFN 127
           C K D D     KK+MKCC  RCVD  SDVKNCG C KICPFPQQCCKGFCVDTNNSRFN
Sbjct: 65  CRKLDGDGLEGNKKIMKCCKHRCVDTDSDVKNCGSCSKICPFPQQCCKGFCVDTNNSRFN 124

Query: 128 CGRCGNKCRFRVRCVYGMCGY 140
           CG+CGN+CRFRVRCVYGMCGY
Sbjct: 125 CGKCGNRCRFRVRCVYGMCGY 142

[Close]

BLAST of Sed0006471 vs. NCBI nr
Match: TYK23073.1 (stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 6.5e-40
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 11  AHVSLLLSI--SFLIQAQDLSPSLWL-----NNKLDVNDDNNEFSKHSSCSAKRHFCWKD 70
           AH+ LLLS+  S LIQA++ SP  WL     NN+LD N+D+N + K  +CS K+ FC K 
Sbjct: 8   AHIFLLLSLLFSLLIQAENFSP--WLKVKLNNNELD-NEDHNRYGKR-NCSGKQIFCRKL 67

Query: 71  ED--DEPKRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGR 130
           ++   + K+KK+MKCC  RCVD  SD+KNCG+CGKICPFPQQCC GFCVDTNN+RFNCG+
Sbjct: 68  DEYGSKWKKKKIMKCCKHRCVDTDSDIKNCGYCGKICPFPQQCCGGFCVDTNNNRFNCGK 127

Query: 131 CGNKCRFRVRCVYGMCGY 140
           CGN+C FRVRCVYGMCGY
Sbjct: 128 CGNRCPFRVRCVYGMCGY 141

[Close]

BLAST of Sed0006471 vs. NCBI nr
Match: XP_022139655.1 (stigma-specific STIG1-like protein 1 [Momordica charantia])

HSP 1 Score: 152.5 bits (384), Expect = 2.6e-33
Identity = 76/141 (53.90%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 13  VSLLLSISFLIQAQD------------LSPSLWLNNKLDVNDDNNEFSKHSSCSAKRHFC 72
           V +L+ +SFL++A+             L+PS WL  K+   D  N F KH  CS K   C
Sbjct: 10  VLVLVELSFLVRAEGFDGWRFGNNATVLAPSPWLRKKVIEEDYKNWFPKH-GCSHKS--C 69

Query: 73  WK-DEDDEPKRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNC 132
            K  ED  P+RKK MKCC  RCVD  SDV NCGFCG+ C FP+QCC+G CV+TN S+FNC
Sbjct: 70  RKGGEDGRPERKKKMKCCKNRCVDVGSDVNNCGFCGRRCSFPRQCCRGLCVNTNKSKFNC 129

Query: 133 GRCGNKCRFRVRCVYGMCGYG 141
           G+CG+KC FR+RC+YGMCGYG
Sbjct: 130 GKCGHKCPFRIRCIYGMCGYG 147

[Close]

BLAST of Sed0006471 vs. NCBI nr
Match: KAA0049791.1 (stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-29
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 74  MKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCV 133
           MKCC  RCVD  SD+KNCG+CGKICPFPQQCC GFCVDTNN+RFNCG+CGN+C FRVRCV
Sbjct: 1   MKCCKHRCVDTDSDIKNCGYCGKICPFPQQCCGGFCVDTNNNRFNCGKCGNRCPFRVRCV 60

Query: 134 YGMCGY 140
           YGMCGY
Sbjct: 61  YGMCGY 66

[Close]

BLAST of Sed0006471 vs. NCBI nr
Match: KAG6607787.1 (hypothetical protein SDJN03_01129, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037362.1 hypothetical protein SDJN02_00987, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129.0 bits (323), Expect = 3.1e-26
Identity = 63/106 (59.43%), Postives = 80/106 (75.47%), Query Frame = 0


Query: 10  LAHVSLLLSISFLIQA------QDLSPSLWLNNKLDVNDDNN---EFSKHSSCSAKRHFC 69
           LAH+SLLLS+ FLIQA      + L  S WLNNKLD   D++   EF ++ +CS K+HFC
Sbjct: 6   LAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFC 65

Query: 70  WKDEDDEPKRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCK 107
           WK++ D  KRKK+M+CC  RCVD RSDV+NCGFCGKICPFP++CC+
Sbjct: 66  WKNQKDGWKRKKIMRCCKHRCVDVRSDVENCGFCGKICPFPRRCCR 111

[Close]

BLAST of Sed0006471 vs. ExPASy Swiss-Prot
Match: Q9FLQ0 (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.3e-14
Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = 0


Query: 28  LSPSLWLNNKLDVNDDNNEFSKHSS--CSAKRHFCWKDEDDEPKRKKLMKCCNRRCVDFR 87
           + PS +L  K+D   +    + +++  C+     C    D        M CCN +C+D  
Sbjct: 50  IRPSRFLAEKVDKGKEPKARNPNAADHCNKDNEIC-SSSDYSTGANATMACCNNKCMDLS 109

Query: 88  SDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCVYGMCGY 140
           +D KNCG C   C F Q CC+G CV     + +CG C ++C     CVYG+C Y
Sbjct: 110 TDDKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNY 162

[Close]

BLAST of Sed0006471 vs. ExPASy Swiss-Prot
Match: Q9SZ28 (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g26880 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.9e-13
Identity = 30/66 (45.45%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 74  MKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCV 133
           M CCN +C+D  SD  NCG C   C F Q CC+G CV     + +CG+C + C     CV
Sbjct: 86  MTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCV 145

Query: 134 YGMCGY 140
           YG+C Y
Sbjct: 146 YGLCNY 151

[Close]

BLAST of Sed0006471 vs. ExPASy Swiss-Prot
Match: Q9LNN7 (Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 31/71 (43.66%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 69  KRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRF 128
           K   L+ CC + C +   D  NCG CG  C F Q+CC G C   N +  +CG+C  KC  
Sbjct: 97  KGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCAS 156

Query: 129 RVRCVYGMCGY 140
            V+C YG CGY
Sbjct: 157 GVKCEYGYCGY 167

[Close]

BLAST of Sed0006471 vs. ExPASy Swiss-Prot
Match: Q40579 (Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10
Identity = 27/64 (42.19%), Postives = 34/64 (53.12%), Query Frame = 0


Query: 76  CCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCVYG 135
           C N  CVD  ++  NCG CG +C    +CC G CVD      NCG+C N C    +C +G
Sbjct: 82  CFNYSCVDVSTNRFNCGSCGLVCNLGTRCCGGICVDIQKDNGNCGKCSNVCSPGQKCSFG 141

Query: 136 MCGY 140
            C Y
Sbjct: 142 FCDY 145

[Close]

BLAST of Sed0006471 vs. ExPASy Swiss-Prot
Match: Q6EEH1 (Protein STIG1 OS=Solanum lycopersicum OX=4081 GN=STIG1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09
Identity = 26/62 (41.94%), Postives = 33/62 (53.23%), Query Frame = 0


Query: 76  CCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCVYG 135
           C N  CVD  ++  NCG CG +C    +CC G CVD      NCG+C N C     C +G
Sbjct: 79  CFNYFCVDLFTNRFNCGSCGLVCIVGTRCCGGICVDIKKDNGNCGKCNNVCSPGQNCSFG 138

Query: 136 MC 138
           +C
Sbjct: 139 LC 140

[Close]

BLAST of Sed0006471 vs. ExPASy TrEMBL
Match: A0A0A0K719 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G180130 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.2e-41
Identity = 86/137 (62.77%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 10  LAHVSLLLSI--SFLIQAQDLSPSLWLNNKL---DVNDDNNEFSKHSSCSAKRHFCWKDE 69
           LAH+ LLLS+  S +I+A+  SP  WL  KL   ++++++N + KH +CS K+ FC K +
Sbjct: 7   LAHIFLLLSLFFSLVIKAEHFSP--WLKEKLNDDELDNEDNRYGKH-NCSGKQIFCRKLD 66

Query: 70  D--DEPKRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRC 129
           +   + KRKK+MKCC  RCVD  SD+KNCG+CGKICPFPQQCCKGFCVDTNN+RFNCG+C
Sbjct: 67  EYGSKGKRKKIMKCCKHRCVDTDSDIKNCGYCGKICPFPQQCCKGFCVDTNNNRFNCGKC 126

Query: 130 GNKCRFRVRCVYGMCGY 140
           GNKC FRVRCVYGMCGY
Sbjct: 127 GNKCPFRVRCVYGMCGY 140

[Close]

BLAST of Sed0006471 vs. ExPASy TrEMBL
Match: A0A5D3DHL9 (Stigma-specific STIG1-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00460 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 3.2e-40
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 11  AHVSLLLSI--SFLIQAQDLSPSLWL-----NNKLDVNDDNNEFSKHSSCSAKRHFCWKD 70
           AH+ LLLS+  S LIQA++ SP  WL     NN+LD N+D+N + K  +CS K+ FC K 
Sbjct: 8   AHIFLLLSLLFSLLIQAENFSP--WLKVKLNNNELD-NEDHNRYGKR-NCSGKQIFCRKL 67

Query: 71  ED--DEPKRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGR 130
           ++   + K+KK+MKCC  RCVD  SD+KNCG+CGKICPFPQQCC GFCVDTNN+RFNCG+
Sbjct: 68  DEYGSKWKKKKIMKCCKHRCVDTDSDIKNCGYCGKICPFPQQCCGGFCVDTNNNRFNCGK 127

Query: 131 CGNKCRFRVRCVYGMCGY 140
           CGN+C FRVRCVYGMCGY
Sbjct: 128 CGNRCPFRVRCVYGMCGY 141

[Close]

BLAST of Sed0006471 vs. ExPASy TrEMBL
Match: A0A6J1CCX1 (stigma-specific STIG1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111010504 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33
Identity = 76/141 (53.90%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 13  VSLLLSISFLIQAQD------------LSPSLWLNNKLDVNDDNNEFSKHSSCSAKRHFC 72
           V +L+ +SFL++A+             L+PS WL  K+   D  N F KH  CS K   C
Sbjct: 10  VLVLVELSFLVRAEGFDGWRFGNNATVLAPSPWLRKKVIEEDYKNWFPKH-GCSHKS--C 69

Query: 73  WK-DEDDEPKRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNC 132
            K  ED  P+RKK MKCC  RCVD  SDV NCGFCG+ C FP+QCC+G CV+TN S+FNC
Sbjct: 70  RKGGEDGRPERKKKMKCCKNRCVDVGSDVNNCGFCGRRCSFPRQCCRGLCVNTNKSKFNC 129

Query: 133 GRCGNKCRFRVRCVYGMCGYG 141
           G+CG+KC FR+RC+YGMCGYG
Sbjct: 130 GKCGHKCPFRIRCIYGMCGYG 147

[Close]

BLAST of Sed0006471 vs. ExPASy TrEMBL
Match: A0A5A7U868 (Stigma-specific STIG1-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001510 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.1e-29
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 74  MKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCV 133
           MKCC  RCVD  SD+KNCG+CGKICPFPQQCC GFCVDTNN+RFNCG+CGN+C FRVRCV
Sbjct: 1   MKCCKHRCVDTDSDIKNCGYCGKICPFPQQCCGGFCVDTNNNRFNCGKCGNRCPFRVRCV 60

Query: 134 YGMCGY 140
           YGMCGY
Sbjct: 61  YGMCGY 66

[Close]

BLAST of Sed0006471 vs. ExPASy TrEMBL
Match: A0A2N9IK28 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52700 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.3e-22
Identity = 54/111 (48.65%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 29  SPSLWLNNKLDVNDDNNEFSKHSSCSAKRHFCWKDEDDEPKRKKLMKCCNRRCVDFRSDV 88
           S S WL   ++   D    ++   C  K   C K  DD P+R    +CC   CVD  SDV
Sbjct: 55  SSSPWLKRIMNKPPD----TRAPGCWKKPWIC-KQGDDPPRR----RCCRNHCVDVTSDV 114

Query: 89  KNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCVYGMCGY 140
            NCG CG  CPF  QCC+G C++TN SRFNCG+CGN+C + V C+YGMCGY
Sbjct: 115 NNCGLCGIRCPFTWQCCRGLCINTNRSRFNCGKCGNRCPYGVLCIYGMCGY 156

[Close]

BLAST of Sed0006471 vs. TAIR 10
Match: AT1G50650.1 (Stigma-specific Stig1 family protein )

HSP 1 Score: 84.7 bits (208), Expect = 6.3e-17
Identity = 42/109 (38.53%), Postives = 54/109 (49.54%), Query Frame = 0


Query: 31  SLWLNNKLDVNDDNNEFSKHSSCSAKRHFCWKDEDDEPKRKKLMKCCNRRCVDFRSDVKN 90
           S WL + +      N + +      K   C +    E +    M+CC  +CVD  SD  +
Sbjct: 34  SSWLKSHIKAATTTN-WGRPKPPMCKPWICKRSGPSEAR----MRCCRNQCVDVLSDPNH 93

Query: 91  CGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCVYGMCGY 140
           C FC K C F   CC G CVDTN    NCG+CGN+C     C +GMCGY
Sbjct: 94  CRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFGMCGY 137

[Close]

BLAST of Sed0006471 vs. TAIR 10
Match: AT1G11925.1 (Stigma-specific Stig1 family protein )

HSP 1 Score: 78.6 bits (192), Expect = 4.5e-15
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 76  CCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCVYG 135
           CC ++CVD R++  NCG CGK C + + CC G+CV+    R +CG C  KC+    C YG
Sbjct: 76  CCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDRRHCGGCFKKCKKGRSCAYG 135

Query: 136 MCGY 140
           MC Y
Sbjct: 136 MCSY 139

[Close]

BLAST of Sed0006471 vs. TAIR 10
Match: AT5G55110.1 (Stigma-specific Stig1 family protein )

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-15
Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = 0


Query: 28  LSPSLWLNNKLDVNDDNNEFSKHSS--CSAKRHFCWKDEDDEPKRKKLMKCCNRRCVDFR 87
           + PS +L  K+D   +    + +++  C+     C    D        M CCN +C+D  
Sbjct: 50  IRPSRFLAEKVDKGKEPKARNPNAADHCNKDNEIC-SSSDYSTGANATMACCNNKCMDLS 109

Query: 88  SDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCVYGMCGY 140
           +D KNCG C   C F Q CC+G CV     + +CG C ++C     CVYG+C Y
Sbjct: 110 TDDKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNY 162

[Close]

BLAST of Sed0006471 vs. TAIR 10
Match: AT4G26880.1 (Stigma-specific Stig1 family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 30/66 (45.45%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 74  MKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRFRVRCV 133
           M CCN +C+D  SD  NCG C   C F Q CC+G CV     + +CG+C + C     CV
Sbjct: 86  MTCCNNKCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCV 145

Query: 134 YGMCGY 140
           YG+C Y
Sbjct: 146 YGLCNY 151

[Close]

BLAST of Sed0006471 vs. TAIR 10
Match: AT1G53130.1 (Stigma-specific Stig1 family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 31/71 (43.66%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 69  KRKKLMKCCNRRCVDFRSDVKNCGFCGKICPFPQQCCKGFCVDTNNSRFNCGRCGNKCRF 128
           K   L+ CC + C +   D  NCG CG  C F Q+CC G C   N +  +CG+C  KC  
Sbjct: 97  KGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCAS 156

Query: 129 RVRCVYGMCGY 140
            V+C YG CGY
Sbjct: 157 GVKCEYGYCGY 167

The following BLAST results are available for this feature:

BLAST of Sed0006471 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900147.1	1.1e-42	65.25	stigma-specific STIG1-like protein 1 [Benincasa hispida]	[more]
TYK23073.1	6.5e-40	63.04	stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]	[more]
XP_022139655.1	2.6e-33	53.90	stigma-specific STIG1-like protein 1 [Momordica charantia]	[more]
KAA0049791.1	2.3e-29	83.33	stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]	[more]
KAG6607787.1	3.1e-26	59.43	hypothetical protein SDJN03_01129, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0006471 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLQ0	8.3e-14	33.33	Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g5511...	[more]
Q9SZ28	1.9e-13	45.45	Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g2688...	[more]
Q9LNN7	1.6e-12	43.66	Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1	[more]
Q40579	1.1e-10	42.19	Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1	[more]
Q6EEH1	2.1e-09	41.94	Protein STIG1 OS=Solanum lycopersicum OX=4081 GN=STIG1 PE=1 SV=1	[more]

BLAST of Sed0006471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K719	2.2e-41	62.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G180130 PE=3 SV=1	[more]
A0A5D3DHL9	3.2e-40	63.04	Stigma-specific STIG1-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1CCX1	1.3e-33	53.90	stigma-specific STIG1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5A7U868	1.1e-29	83.33	Stigma-specific STIG1-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A2N9IK28	2.3e-22	48.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52700 PE=3 SV=1	[more]

BLAST of Sed0006471 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50650.1	6.3e-17	38.53	Stigma-specific Stig1 family protein	[more]
AT1G11925.1	4.5e-15	46.88	Stigma-specific Stig1 family protein	[more]
AT5G55110.1	5.9e-15	33.33	Stigma-specific Stig1 family protein	[more]
AT4G26880.1	1.3e-14	45.45	Stigma-specific Stig1 family protein	[more]
AT1G53130.1	1.1e-13	43.66	Stigma-specific Stig1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006969	Stigma-specific protein Stig1	PFAM	PF04885	Stig1	coord: 37..139 e-value: 3.0E-25 score: 89.3
IPR006969	Stigma-specific protein Stig1	PANTHER	PTHR33227	FAMILY NOT NAMED	coord: 30..139
None	No IPR available	PANTHER	PTHR33227:SF18	STIGMA-SPECIFIC STIG1-LIKE PROTEIN 4	coord: 30..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006471.1	Sed0006471.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042335	cuticle development
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005576	extracellular region