Homology
BLAST of Sed0006467 vs. NCBI nr
Match:
XP_038884734.1 (probable splicing factor 3A subunit 1 [Benincasa hispida])
HSP 1 Score: 1424.1 bits (3685), Expect = 0.0e+00
Identity = 750/813 (92.25%), Postives = 778/813 (95.69%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
MLGSFGPILTLPAPSEDSKP V DEII NNEVDKDN+NS P S+ATHTKTIGIIHPP
Sbjct: 1 MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPASVATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHAYYQHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQPS+AADSAA S SGPAAD+NETM AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSAAPASAPSGPAADNNETMSAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVEAIDFADDEDE+LPPPMTL+EVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLDEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMRA +LGENDNDKNDMKVDE+ EPPMRIVKNWKRPEER+ E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEESEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQNDATN+DARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDATNSDARNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPSLP +AHYST ISGGLP+ PPPQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMSAHYSTSISGGLPI-PPPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNV-PPPPGSQFTPLPVPRPFVPLPAPP 660
VQPP AIPG FFMNRPPS+PPPMSMNAPNM+V PPPPGSQFT + VPRPFVPLPAPP
Sbjct: 601 VQPPPPAIPGQQPFFMNRPPSMPPPMSMNAPNMSVPPPPPGSQFTHMQVPRPFVPLPAPP 660
Query: 661 PMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFL 720
PMNTM+ PPPMPQGVPPPPMPQGSLPPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFL
Sbjct: 661 PMNTMIQPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFL 720
Query: 721 AQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGK 780
AQHPGPVRITVSVPN DDGNLKGQVLEITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGK
Sbjct: 721 AQHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGK 780
Query: 781 PGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
PGFLKDN+SLAYYNVGAGE LS+SLRERGGRKR
Sbjct: 781 PGFLKDNMSLAYYNVGAGEALSISLRERGGRKR 812
BLAST of Sed0006467 vs. NCBI nr
Match:
XP_008441262.1 (PREDICTED: probable splicing factor 3A subunit 1 [Cucumis melo] >TYK06683.1 putative splicing factor 3A subunit 1 [Cucumis melo var. makuwa])
HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 748/812 (92.12%), Postives = 775/812 (95.44%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
MLGSFGPILTLPAPSEDSKP V DEII NNEVDKDN+NS P S+ATHTKTIGIIHPP
Sbjct: 1 MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQPS+ DS A VS SGPA+D+NET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVEAIDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMRA +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+ E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+ EDQNDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPSLP NAHYST ISGGLP+ PPPQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPI-PPPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP A+PG SFFMNRPPSIPPPMSMNAPNM+VPPPPGSQFT + VPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MNTM+ PPPMPQGVPPPPMPQGS+PPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGPVRITVSVPN DDGNLKGQVLEITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807
BLAST of Sed0006467 vs. NCBI nr
Match:
XP_022137825.1 (probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_022137826.1 probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia])
HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 740/812 (91.13%), Postives = 771/812 (94.95%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVVH---DEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
MLGSFGPILTLPAPSEDSK V DEII NN+ DKD +NS P S+ATHTKTIGIIHPP
Sbjct: 1 MLGSFGPILTLPAPSEDSKLTVQDEKDEIINNNDGDKDKTNSAPASVATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYY HRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYHHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQP +AADSAA SGPAADSNET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPALAPSGPAADSNETLAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLT KLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTLKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVE IDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEM+MDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMEMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMR +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+ E++HTKFVVSPITGEL
Sbjct: 361 EEGMRTARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQND TNND RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDGTNNDIRNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV P PQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV-PQPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP A+PG +FMNRPPS+PPPMSMNAPNM VPPPPGSQFTP+PVPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQPYFMNRPPSMPPPMSMNAPNMGVPPPPGSQFTPMPVPRPFVPLPAPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MNTMM+PPPMPQG+PPPPMPQGSLPPLPP+EAPPPLP+EPEPKRQKLDDSLL+PE+QFLA
Sbjct: 661 MNTMMLPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEEQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGP+RITVSVPN DDGNLKGQVL ITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVLGITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGEPLSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEPLSLSLRERGGRKR 811
BLAST of Sed0006467 vs. NCBI nr
Match:
XP_022931984.1 (probable splicing factor 3A subunit 1 [Cucurbita moschata])
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 744/812 (91.63%), Postives = 774/812 (95.32%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
MLGSFGPILTLPAPSEDSKP V DEII ++EVDKD +NSTPVS+ATHTKTIGIIHPP
Sbjct: 1 MLGSFGPILTLPAPSEDSKPTVQDEQDEIINDHEVDKDKTNSTPVSVATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHAYYQHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQPS+AADS A S SGPAADSNET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSTAPASAPSGPAADSNETVAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLTEKLKKSV DMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVIDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVEAIDFADDEDE+LPPPMTLEEV+R+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVVRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMRA +LGENDNDKNDMK+DE+PEPPMRIVKNWKRPEERI E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKIDEEPEPPMRIVKNWKRPEERIPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KKDDQPKQVIWDGHTGSIGRTANQAMSQN+VGED ND T NDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDPNDTTYNDARNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPS+PPNAHYS I+ GLPV PQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSMPPNAHYSNPIT-GLPV-HQPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP A+PG S+FMNRPPSIPPPMSMNAPNM+VPPPPGSQFTP+PVPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSYFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPAPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MN+MM PPPMPQGVPPPPMPQGSLPPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNSMMPPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGP+RITVSVPN DDGNLKGQVLEITVQ+L+ETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 810
BLAST of Sed0006467 vs. NCBI nr
Match:
XP_022158817.1 (probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_022158818.1 probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia])
HSP 1 Score: 1414.1 bits (3659), Expect = 0.0e+00
Identity = 738/812 (90.89%), Postives = 771/812 (94.95%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVVH---DEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
ML SFGPILTLPAPSEDSK V DEII NN+ DKD +NS P SIATHTKTIGIIHPP
Sbjct: 1 MLSSFGPILTLPAPSEDSKLTVQDEKDEIIDNNDGDKDKTNSAPASIATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQP +AADSAA S SGPAA+SNE + AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPASAPSGPAABSNEALAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVE IDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMRA +LGENDNDKNDMK+D +PEPPMRIVKNWKRPE+R+ E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKIDVEPEPPMRIVKNWKRPEDRVPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQND+ N D RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDSANYDVRNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPN HYSTQISGGLPV PPPQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNVHYSTQISGGLPV-PPPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP AIPG H +FMNRPPS+PPPMSMNAPNM+VPPPPGSQFTP+PVPRPFVPLP PPP
Sbjct: 601 VQPPPPAIPGQHPYFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPTPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MNTMM PPPMPQG+PPPPMPQGSLPPLPP+EAPPPLP+EPEPKRQKLDD+LL+PEDQFLA
Sbjct: 661 MNTMMPPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDALLMPEDQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGP+RITVSVPN DDGNLKGQV+EITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVVEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 811
BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match:
Q8RXF1 (Probable splicing factor 3A subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At1g14650 PE=1 SV=2)
HSP 1 Score: 943.7 bits (2438), Expect = 1.3e-273
Identity = 545/818 (66.63%), Postives = 627/818 (76.65%), Query Frame = 0
Query: 8 ILTLPAPSEDSK------PVVHDEIIINNEVDKDNSNST---PVSIATHTKTIGIIHPPP 67
IL L AP D K + D+ + E+ + +NS P ++ATHT+TIGIIHPPP
Sbjct: 7 ILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPP 66
Query: 68 DIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 127
DIR+IV+KT QFV+KNG EFEKRII +N N KFNFL SSDPYHA+YQH+L+E+RAQN+
Sbjct: 67 DIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKD 126
Query: 128 SAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPE 187
A Q ++ +D +G AAD +E +PD+ A F+ K LE PE E+YTVRLPE
Sbjct: 127 GA-QGTDDSDGTTDPQLDTG-AADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPE 186
Query: 188 GITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSK 247
GITGEELDIIKLTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL DAYS+
Sbjct: 187 GITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSE 246
Query: 248 VLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWH 307
VLMPPK L EKL+KS D+TTVLERC+HRLEW+RSQ+Q ++K EDE E ER+QMAMIDWH
Sbjct: 247 VLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWH 306
Query: 308 DFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEE-EIVEPGKEMEMDMDEEEMQLV 367
DFVVVE+IDFAD+EDEELPPPMTL+EVIR+SK S EE EIVEPGKE+EM+MDEEE++LV
Sbjct: 307 DFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLV 366
Query: 368 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 427
EGMRA L EN +N E PMRIVKNWKRPE+RI TE++ TK V+SPITGEL
Sbjct: 367 AEGMRAANLEENVKIEN----VHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGEL 426
Query: 428 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 487
IPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLARLRPDIFGTTE
Sbjct: 427 IPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTE 486
Query: 488 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 547
EEVSNAVKAEIE KKD+QPKQVIWDGHTGSIGRTANQA+SQN GE+Q D D + P
Sbjct: 487 EEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGDPNSFP 546
Query: 548 GPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIP 607
GPAAL PP+PGVP VRPLPPPP LALNLP PP+A Y P P+P + M+
Sbjct: 547 GPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQY----------PGAPRPLGVPMMQ 606
Query: 608 PVQPPHLAI----PGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFT-PLPVPRPFVP 667
P+ H PGH MNRPP + P M+VPPPPGSQF + +PRP+
Sbjct: 607 PMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPRPYGQ 666
Query: 668 LPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVP 727
L PP MM PPPMP G+ PPP PP+EAPPPLPEEPE KRQK D+S LVP
Sbjct: 667 L--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDESALVP 726
Query: 728 EDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQ 787
EDQFLAQHPGP I VS PN +D GQ +EITVQ+L+E VGSLKEKIAGEIQ+PANKQ
Sbjct: 727 EDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQ 785
Query: 788 KLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
KLSGK GFLKDN+SLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 787 KLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785
BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match:
Q8K4Z5 (Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1)
HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-112
Identity = 316/841 (37.57%), Postives = 460/841 (54.70%), Query Frame = 0
Query: 6 GPILTLPAP---SEDSKPVVHDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPPPDIRS 65
GP+ +P P + +SK + +E +D + S PV +GII+PPP++R+
Sbjct: 4 GPVQAVPPPPPVATESKQPIEEEA----SSKEDPTPSKPV--------VGIIYPPPEVRN 63
Query: 66 IVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQ 125
IVDKT FVA+NGPEFE RI N N KFNFLN +DPYHAYY+H++SEF+ + AQ+
Sbjct: 64 IVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EGKAQE 123
Query: 126 PSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEGITG 185
PS A + + + + K + + + PPE E + P I+
Sbjct: 124 PSAAIPKVMQQQQQA-----TQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSISA 183
Query: 186 EELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMP 245
+LD++KLTAQFVARNG+ FLT L +E N QF FL+P HS+F +FT L + Y+K+L+P
Sbjct: 184 FDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIP 243
Query: 246 PKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVV 305
PKGL KLKK + VL++ +R+EW + Q++ R+K E+E E+ER+ A IDWHDFVV
Sbjct: 244 PKGLFSKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVV 303
Query: 306 VEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGK-EMEMDMDEEEMQLVEE-- 365
VE +DF +E PPP T EE+ + I E+ E + EME++ DEE+ + EE
Sbjct: 304 VETVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDQEKAEETP 363
Query: 366 -----GMRATKLGE-NDNDKNDMKVDEQPEPPMR----------IVKNWKRPE--ERIST 425
+ + E +D+++ KV PE PM IV+ P+ + +
Sbjct: 364 SQLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPP 423
Query: 426 EKEHTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQDDEIS 485
+++VSPITGE IP ++M EHMRI L+DP++ EQ++R + + + A +I
Sbjct: 424 APAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIE 483
Query: 486 RNIVGLARLRPDIFGTTEEEVSNAV-KAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQN 545
++ LA R DIFG E + + + EI+K ++ +V WDGH+GS+ RT QA N
Sbjct: 484 SSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQAAQAN 543
Query: 546 VVGEDQNDATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYST 605
+ ++Q +A + +P P KP + PPPP A N+PS P T
Sbjct: 544 ITLQEQIEAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPSSAPPI---T 603
Query: 606 QISGGLPVPPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSI--PPPMSMNAPNMNVP 665
+ +PPP + V+S +P + P +A S P S+ P P ++AP +NV
Sbjct: 604 SVPRPPAMPPPVRTTVVSAVPVMPRPPMA-----SVVRLPPGSVIAPMPPIIHAPRINV- 663
Query: 666 PPPGSQFTPLPVPRPFVPLPAPPPM--NTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPP 725
P+P P + P PPPM T +P P VP P P+PP PP
Sbjct: 664 -------VPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAPVPAP-------APMPPVHPPP 723
Query: 726 PLPEEPEPKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDD---GNLKGQVLEITVQT 785
P+ +EP K+ K +DSL+ PE++FL ++ GPV I V VPN D L GQ L T+
Sbjct: 724 PMEDEPPSKKLKTEDSLM-PEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQGLVFTL-P 783
Query: 786 LTETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRK 809
LT+ V +K KI +PA KQKL + F+KD+ SLAYYN+ +G + L+L+ERGGRK
Sbjct: 784 LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIHLALKERGGRK 791
BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match:
A2VDN6 (Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 3.8e-111
Identity = 314/840 (37.38%), Postives = 454/840 (54.05%), Query Frame = 0
Query: 6 GPILTLPAPSEDSKPVVHDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPPPDIRSIVD 65
GP+ +P P P + E +STP +GII+PPP++R+IVD
Sbjct: 4 GPVQAVPPP----PPAATEPKQPTEEEASSKEDSTP-----SKPVVGIIYPPPEVRNIVD 63
Query: 66 KTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSE 125
KT FVA+NGPEFE RI N N KFNFLN +DPYHAYY+H++SEF+ + AQ+PS
Sbjct: 64 KTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EGKAQEPSA 123
Query: 126 AADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEGITGEEL 185
A + S + + K + + + PPE E + P I+ +L
Sbjct: 124 AIPKVMQQQQQA-----SQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSISAFDL 183
Query: 186 DIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKG 245
D++KLTAQFVARNG+ FLT L +E N QF FL+P HS+F +FT L + Y+K+L+PPKG
Sbjct: 184 DVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKG 243
Query: 246 LTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEA 305
L KLKK + VL++ +R+EW + Q++ R+K E+E E+ER+ A IDWHDFVVVE
Sbjct: 244 LFTKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVET 303
Query: 306 IDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGK-EMEMDMDEEEMQLVEEGMRAT 365
+DF +E PPP T EE+ + I E+ E + EME++ DEE+ + + +
Sbjct: 304 VDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPS 363
Query: 366 KLGE----------NDNDKNDMKVDEQPEPPMR----------IVKNWKRPE--ERISTE 425
+L + +D+++ KV PE PM IV+ P+ + +
Sbjct: 364 QLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPA 423
Query: 426 KEHTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQDDEISR 485
+++VSPITGE IP ++M EHMRI L+DP++ EQ++R + + + A +I
Sbjct: 424 PAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIES 483
Query: 486 NIVGLARLRPDIFGTTEEEVSNAV-KAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQNV 545
++ LA R DIFG E + + + EI+K ++ +V WDGH+GS+ RT QA N+
Sbjct: 484 SLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQAAQANI 543
Query: 546 VGEDQNDATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQ 605
++Q +A + +P P KP + PPPP A N+PS P T
Sbjct: 544 TLQEQIEAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPSSAPPI---TS 603
Query: 606 ISGGLPVPPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSI--PPPMSMNAPNMNVPP 665
+ +PPP + V+S +P + P +A S P S+ P P ++AP +NV
Sbjct: 604 VPRPPAMPPPVRTTVVSAVPVMPRPPMA-----SVVRLPPGSVIAPMPPIIHAPRINV-- 663
Query: 666 PPGSQFTPLPVPRPFVPLPAPPPM--NTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPP 725
P+P P + P PPPM T +P P VP P P+PP PPP
Sbjct: 664 ------VPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVPAP-------APMPPVHPPPP 723
Query: 726 LPEEPEPKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDD---GNLKGQVLEITVQTL 785
+ +EP K+ K +DSL+ PE++FL ++ GPV I V VPN D L GQVL T+ L
Sbjct: 724 MEDEPASKKLKTEDSLM-PEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTL-PL 783
Query: 786 TETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
T+ V +K KI +PA KQKL + F+KD+ SLAYYN+ G + L+L+ERGGRK+
Sbjct: 784 TDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793
BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match:
Q15459 (Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 3.8e-111
Identity = 312/834 (37.41%), Postives = 455/834 (54.56%), Query Frame = 0
Query: 12 PAPSEDSKPVVHDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPPPDIRSIVDKTGQFV 71
P P+E +P + +D++ S PV +GII+PPP++R+IVDKT FV
Sbjct: 14 PVPTEPKQPTEEEA-----SSKEDSAPSKPV--------VGIIYPPPEVRNIVDKTASFV 73
Query: 72 AKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSEAADSAA 131
A+NGPEFE RI N N KFNFLN +DPYHAYY+H++SEF+ + AQ+PS A
Sbjct: 74 ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EGKAQEPSAAIPKVM 133
Query: 132 SVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEGITGEELDIIKLT 191
+ + + + K + + + PPE E + P I+ +LD++KLT
Sbjct: 134 QQQQQT-----TQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSISAFDLDVVKLT 193
Query: 192 AQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLK 251
AQFVARNG+ FLT L +E N QF FL+P HS+F +FT L + Y+K+L+PPKGL KLK
Sbjct: 194 AQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFSKLK 253
Query: 252 KSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADD 311
K + VL++ +R+EW + Q++ R+K E+E E+ER+ A IDWHDFVVVE +DF +
Sbjct: 254 KEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPN 313
Query: 312 EDEELPPPMTLEEVIRKSKISVAEEEIVEPGK-EMEMDMDEEEMQLVEEGMRATKLGE-- 371
E PPP T EE+ + I E+ E + EME++ DEE+ + + ++L +
Sbjct: 314 EQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDDKQEKAEEPPSQLDQDT 373
Query: 372 --------NDNDKNDMKVDEQPEPPMR----------IVKNWKRPE--ERISTEKEHTKF 431
+D+++ KV PE PM IV+ P+ + + ++
Sbjct: 374 QVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEY 433
Query: 432 VVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQDDEISRNIVGLA 491
+VSPITGE IP ++M EHMRI L+DP++ EQ++R + + + A +I ++ LA
Sbjct: 434 LVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLA 493
Query: 492 RLRPDIFGTTEEEVSNAV-KAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQN 551
R DIFG E + + + EI+K ++ +V WDGH+GS+ RT QA N+ ++Q
Sbjct: 494 ERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQAAQANITLQEQI 553
Query: 552 DATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLP 611
+A + +P P KP + PPPP A N+PS P T +
Sbjct: 554 EAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPSSAPPI---TSVPRPPT 613
Query: 612 VPPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSI--PPPMSMNAPNMNVPPPPGSQF 671
+PPP + V+S +P + P +A S P S+ P P ++AP +NV
Sbjct: 614 MPPPVRTTVVSAVPVMPRPPMA-----SVVRLPPGSVIAPMPPIIHAPRINV-------- 673
Query: 672 TPLPVPRPFVPLPAPPPM--NTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPE 731
P+P P + P PPPM T +P P VP P P+PP PPP+ +EP
Sbjct: 674 VPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVPAP-------APMPPVHPPPPMEDEPT 733
Query: 732 PKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDD---GNLKGQVLEITVQTLTETVGS 791
K+ K +DSL+ PE++FL ++ GPV I V VPN D L GQVL T+ LT+ V
Sbjct: 734 SKKLKTEDSLM-PEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTL-PLTDQVSV 793
Query: 792 LKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
+K KI +PA KQKL + F+KD+ SLAYYN+ G + L+L+ERGGRK+
Sbjct: 794 IKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793
BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match:
Q86A14 (Probable splicing factor 3A subunit 1 OS=Dictyostelium discoideum OX=44689 GN=sf3a1 PE=3 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 6.8e-68
Identity = 241/831 (29.00%), Postives = 395/831 (47.53%), Query Frame = 0
Query: 59 DIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 118
++++I+DKT + AK G FE ++ N KFNF+ D Y+ YY++++ E +A+ Q+
Sbjct: 12 ELKTIIDKTAAYAAKLGESFENKVKQREGHNAKFNFMKEGDQYYPYYRNKIVENKAKIQA 71
Query: 119 SAQQPSEAADS-------------------AASVSGSSGPAADSNETMVAKPDVSA---- 178
A + AA+ + + ++ P ++ T+V P ++
Sbjct: 72 DAAAAAAAANPKTPSTTTTTTTTTTATTPLPTATATTTSPTPTTSSTIVPVPQTNSTQQL 131
Query: 179 ------------LFK--------PVRKILEPPEAEQYTVRLPEGITGEELDIIKLTAQFV 238
+F+ P +K P+ Y + +P+ +T ELD I+LTAQF+
Sbjct: 132 QQQQQQQQQTTPVFEKPQPPPPPPPKKEPTQPDPLLYILDVPDFMTPLELDTIRLTAQFI 191
Query: 239 ARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLKKS-V 298
A+NG SF L SRE+ N QF FLKPT+ ++ +F +L ++Y++++ PP+G+ E+LK +
Sbjct: 192 AKNGDSFFMELASREVKNSQFDFLKPTNHLYEWFRALVESYAQIIYPPQGIKEQLKSNYF 251
Query: 299 TDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADDEDE 358
++ T+LER ++R E+ + ++ QK E+ ++E+ +A IDWHDFV+V+ I+F +D+ +
Sbjct: 252 SNKQTILERAMNRCEYNQLKEIEEQKKEEREDEEKTIIASIDWHDFVIVDTIEFNEDDLD 311
Query: 359 ELPPPMTLEEVIRKSKISVAEE-------------EIVEPGKEMEMDMDEEEMQLVEEGM 418
+LP P T +++I + + +E +MEM+MD+E+ E+ +
Sbjct: 312 DLPQPRTFDQLIAGDTPFGGSDFDNDGHGSNGKGGQDMEMEMDMEMEMDDEDNNNNEDEI 371
Query: 419 RATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGELIPIN 478
+ L + N + + + ++IVK++++ + + + + IP++
Sbjct: 372 EESSLSSTNTTGN---LPPKDQSKLKIVKDYQKSNSSVKSNAPTKLTQLCQFCKQEIPLD 431
Query: 479 EMSEHMRISLIDPKYKEQKERMFAKIRE-----TTLAQDDEISRNIVGLARLRPDIFGTT 538
EM EHMRI LI + ++ + TL QDD+I+RN+ A R DIFG T
Sbjct: 432 EMQEHMRIELIQKQQRDSRLGGGGSSNNNNNLTNTLTQDDDIARNLQSFASKRVDIFGET 491
Query: 539 EEEVSNAVKAEIEKKDDQPKQ---VIWDGHTGSIGR----------TANQAMSQNVVGED 598
E +K+D+QP Q VIWDGH+GSI R A QA Q
Sbjct: 492 ESS---------KKQDEQPTQAPKVIWDGHSGSIPRVQAAQQAAQLAAQQAAQQKAAAIA 551
Query: 599 QNDATNNDARNLPGPAALPPKP-GVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV 658
A+ A PP+P G+ PPG+ +PP +
Sbjct: 552 AQQASQQQASQQQQQQLQPPQPIGIHHHPQRHLPPGM------MPPGM-----------M 611
Query: 659 PPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPL 718
PP PP M+PP P PPP M P M PPPPG
Sbjct: 612 PPGMMPP--GMMPPGMVP------------------PPPFGMIPPGMVPPPPPG------ 671
Query: 719 PVPRPFVPLPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPP---LPPDEAPPPLPEEPEPK 778
+M P P G+ PP Q LPP P + EEP+ K
Sbjct: 672 ------------------LMIPTAPPGLMIPPTQQQQLPPQTNTSPSSSSSIKVEEPQSK 731
Query: 779 RQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKI 809
+ K+DD +L+PE +L +P PV +TV + + K + +IT+Q T+++ LKEKI
Sbjct: 732 KLKIDD-VLIPESVWLQNNPNPVNLTVEMAD------KSNIYQITLQP-TDSISLLKEKI 760
BLAST of Sed0006467 vs. ExPASy TrEMBL
Match:
A0A5D3C426 (Putative splicing factor 3A subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001770 PE=4 SV=1)
HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 748/812 (92.12%), Postives = 775/812 (95.44%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
MLGSFGPILTLPAPSEDSKP V DEII NNEVDKDN+NS P S+ATHTKTIGIIHPP
Sbjct: 1 MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQPS+ DS A VS SGPA+D+NET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVEAIDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMRA +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+ E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+ EDQNDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPSLP NAHYST ISGGLP+ PPPQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPI-PPPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP A+PG SFFMNRPPSIPPPMSMNAPNM+VPPPPGSQFT + VPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MNTM+ PPPMPQGVPPPPMPQGS+PPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGPVRITVSVPN DDGNLKGQVLEITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807
BLAST of Sed0006467 vs. ExPASy TrEMBL
Match:
A0A1S3B308 (probable splicing factor 3A subunit 1 OS=Cucumis melo OX=3656 GN=LOC103485445 PE=4 SV=1)
HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 748/812 (92.12%), Postives = 775/812 (95.44%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
MLGSFGPILTLPAPSEDSKP V DEII NNEVDKDN+NS P S+ATHTKTIGIIHPP
Sbjct: 1 MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQPS+ DS A VS SGPA+D+NET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVEAIDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMRA +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+ E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+ EDQNDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPSLP NAHYST ISGGLP+ PPPQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPI-PPPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP A+PG SFFMNRPPSIPPPMSMNAPNM+VPPPPGSQFT + VPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MNTM+ PPPMPQGVPPPPMPQGS+PPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGPVRITVSVPN DDGNLKGQVLEITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807
BLAST of Sed0006467 vs. ExPASy TrEMBL
Match:
A0A6J1C7R8 (probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009168 PE=4 SV=1)
HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 740/812 (91.13%), Postives = 771/812 (94.95%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVVH---DEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
MLGSFGPILTLPAPSEDSK V DEII NN+ DKD +NS P S+ATHTKTIGIIHPP
Sbjct: 1 MLGSFGPILTLPAPSEDSKLTVQDEKDEIINNNDGDKDKTNSAPASVATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYY HRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYHHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQP +AADSAA SGPAADSNET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPALAPSGPAADSNETLAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLT KLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTLKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVE IDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEM+MDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMEMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMR +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+ E++HTKFVVSPITGEL
Sbjct: 361 EEGMRTARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQND TNND RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDGTNNDIRNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV P PQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV-PQPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP A+PG +FMNRPPS+PPPMSMNAPNM VPPPPGSQFTP+PVPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQPYFMNRPPSMPPPMSMNAPNMGVPPPPGSQFTPMPVPRPFVPLPAPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MNTMM+PPPMPQG+PPPPMPQGSLPPLPP+EAPPPLP+EPEPKRQKLDDSLL+PE+QFLA
Sbjct: 661 MNTMMLPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEEQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGP+RITVSVPN DDGNLKGQVL ITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVLGITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGEPLSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEPLSLSLRERGGRKR 811
BLAST of Sed0006467 vs. ExPASy TrEMBL
Match:
A0A6J1DX59 (probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025286 PE=4 SV=1)
HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 739/812 (91.01%), Postives = 771/812 (94.95%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVVH---DEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
ML SFGPILTLPAPSEDSK V DEII NN+ DKD +NS P SIATHTKTIGIIHPP
Sbjct: 1 MLSSFGPILTLPAPSEDSKLTVQDEKDEIIDNNDGDKDKTNSAPASIATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQP +AADSAA S SGPAADSNE + AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPASAPSGPAADSNEALAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVE IDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMRA +LGENDNDKNDMK+D +PEPPMRIVKNWKRPE+R+ E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKIDVEPEPPMRIVKNWKRPEDRVPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQND+ N D RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDSANYDVRNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPN HYSTQISGGLPV PPPQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNVHYSTQISGGLPV-PPPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP AIPG H +FMNRPPS+PPPMSMNAPNM+VPPPPGSQFTP+PVPRPFVPLP PPP
Sbjct: 601 VQPPPPAIPGQHPYFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPTPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MNTMM PPPMPQG+PPPPMPQGSLPPLPP+EAPPPLP+EPEPKRQKLDD+LL+PEDQFLA
Sbjct: 661 MNTMMPPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDALLMPEDQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGP+RITVSVPN DDGNLKGQV+EITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVVEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 811
BLAST of Sed0006467 vs. ExPASy TrEMBL
Match:
A0A6J1EVS5 (probable splicing factor 3A subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111438316 PE=4 SV=1)
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 744/812 (91.63%), Postives = 774/812 (95.32%), Query Frame = 0
Query: 1 MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
MLGSFGPILTLPAPSEDSKP V DEII ++EVDKD +NSTPVS+ATHTKTIGIIHPP
Sbjct: 1 MLGSFGPILTLPAPSEDSKPTVQDEQDEIINDHEVDKDKTNSTPVSVATHTKTIGIIHPP 60
Query: 61 PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61 PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHAYYQHRLSEFRAQNQ 120
Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
SSAQQPS+AADS A S SGPAADSNET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSTAPASAPSGPAADSNETVAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
KVLMPPKGLTEKLKKSV DMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVIDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
HDFVVVEAIDFADDEDE+LPPPMTLEEV+R+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVVRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
EEGMRA +LGENDNDKNDMK+DE+PEPPMRIVKNWKRPEERI E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKIDEEPEPPMRIVKNWKRPEERIPAERDHTKFVVSPITGEL 420
Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
EEVSNAVKAEIE KKDDQPKQVIWDGHTGSIGRTANQAMSQN+VGED ND T NDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDPNDTTYNDARNLP 540
Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
GPAALPPKPGVPSVRPLPPPPGLALNLPS+PPNAHYS I+ GLPV PQPPVISMIP
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSMPPNAHYSNPIT-GLPV-HQPQPPVISMIPS 600
Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
VQPP A+PG S+FMNRPPSIPPPMSMNAPNM+VPPPPGSQFTP+PVPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSYFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPAPPP 660
Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
MN+MM PPPMPQGVPPPPMPQGSLPPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNSMMPPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720
Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
QHPGP+RITVSVPN DDGNLKGQVLEITVQ+L+ETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKP 780
Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 810
BLAST of Sed0006467 vs. TAIR 10
Match:
AT1G14650.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein )
HSP 1 Score: 943.7 bits (2438), Expect = 9.5e-275
Identity = 545/818 (66.63%), Postives = 627/818 (76.65%), Query Frame = 0
Query: 8 ILTLPAPSEDSK------PVVHDEIIINNEVDKDNSNST---PVSIATHTKTIGIIHPPP 67
IL L AP D K + D+ + E+ + +NS P ++ATHT+TIGIIHPPP
Sbjct: 7 ILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPP 66
Query: 68 DIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 127
DIR+IV+KT QFV+KNG EFEKRII +N N KFNFL SSDPYHA+YQH+L+E+RAQN+
Sbjct: 67 DIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKD 126
Query: 128 SAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPE 187
A Q ++ +D +G AAD +E +PD+ A F+ K LE PE E+YTVRLPE
Sbjct: 127 GA-QGTDDSDGTTDPQLDTG-AADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPE 186
Query: 188 GITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSK 247
GITGEELDIIKLTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL DAYS+
Sbjct: 187 GITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSE 246
Query: 248 VLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWH 307
VLMPPK L EKL+KS D+TTVLERC+HRLEW+RSQ+Q ++K EDE E ER+QMAMIDWH
Sbjct: 247 VLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWH 306
Query: 308 DFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEE-EIVEPGKEMEMDMDEEEMQLV 367
DFVVVE+IDFAD+EDEELPPPMTL+EVIR+SK S EE EIVEPGKE+EM+MDEEE++LV
Sbjct: 307 DFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLV 366
Query: 368 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 427
EGMRA L EN +N E PMRIVKNWKRPE+RI TE++ TK V+SPITGEL
Sbjct: 367 AEGMRAANLEENVKIEN----VHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGEL 426
Query: 428 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 487
IPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLARLRPDIFGTTE
Sbjct: 427 IPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTE 486
Query: 488 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 547
EEVSNAVKAEIE KKD+QPKQVIWDGHTGSIGRTANQA+SQN GE+Q D D + P
Sbjct: 487 EEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGDPNSFP 546
Query: 548 GPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIP 607
GPAAL PP+PGVP VRPLPPPP LALNLP PP+A Y P P+P + M+
Sbjct: 547 GPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQY----------PGAPRPLGVPMMQ 606
Query: 608 PVQPPHLAI----PGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFT-PLPVPRPFVP 667
P+ H PGH MNRPP + P M+VPPPPGSQF + +PRP+
Sbjct: 607 PMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPRPYGQ 666
Query: 668 LPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVP 727
L PP MM PPPMP G+ PPP PP+EAPPPLPEEPE KRQK D+S LVP
Sbjct: 667 L--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDESALVP 726
Query: 728 EDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQ 787
EDQFLAQHPGP I VS PN +D GQ +EITVQ+L+E VGSLKEKIAGEIQ+PANKQ
Sbjct: 727 EDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQ 785
Query: 788 KLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
KLSGK GFLKDN+SLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 787 KLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785
BLAST of Sed0006467 vs. TAIR 10
Match:
AT1G14650.2 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein )
HSP 1 Score: 943.7 bits (2438), Expect = 9.5e-275
Identity = 545/818 (66.63%), Postives = 627/818 (76.65%), Query Frame = 0
Query: 8 ILTLPAPSEDSK------PVVHDEIIINNEVDKDNSNST---PVSIATHTKTIGIIHPPP 67
IL L AP D K + D+ + E+ + +NS P ++ATHT+TIGIIHPPP
Sbjct: 7 ILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPP 66
Query: 68 DIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 127
DIR+IV+KT QFV+KNG EFEKRII +N N KFNFL SSDPYHA+YQH+L+E+RAQN+
Sbjct: 67 DIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKD 126
Query: 128 SAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPE 187
A Q ++ +D +G AAD +E +PD+ A F+ K LE PE E+YTVRLPE
Sbjct: 127 GA-QGTDDSDGTTDPQLDTG-AADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPE 186
Query: 188 GITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSK 247
GITGEELDIIKLTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL DAYS+
Sbjct: 187 GITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSE 246
Query: 248 VLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWH 307
VLMPPK L EKL+KS D+TTVLERC+HRLEW+RSQ+Q ++K EDE E ER+QMAMIDWH
Sbjct: 247 VLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWH 306
Query: 308 DFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEE-EIVEPGKEMEMDMDEEEMQLV 367
DFVVVE+IDFAD+EDEELPPPMTL+EVIR+SK S EE EIVEPGKE+EM+MDEEE++LV
Sbjct: 307 DFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLV 366
Query: 368 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 427
EGMRA L EN +N E PMRIVKNWKRPE+RI TE++ TK V+SPITGEL
Sbjct: 367 AEGMRAANLEENVKIEN----VHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGEL 426
Query: 428 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 487
IPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLARLRPDIFGTTE
Sbjct: 427 IPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTE 486
Query: 488 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 547
EEVSNAVKAEIE KKD+QPKQVIWDGHTGSIGRTANQA+SQN GE+Q D D + P
Sbjct: 487 EEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGDPNSFP 546
Query: 548 GPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIP 607
GPAAL PP+PGVP VRPLPPPP LALNLP PP+A Y P P+P + M+
Sbjct: 547 GPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQY----------PGAPRPLGVPMMQ 606
Query: 608 PVQPPHLAI----PGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFT-PLPVPRPFVP 667
P+ H PGH MNRPP + P M+VPPPPGSQF + +PRP+
Sbjct: 607 PMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPRPYGQ 666
Query: 668 LPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVP 727
L PP MM PPPMP G+ PPP PP+EAPPPLPEEPE KRQK D+S LVP
Sbjct: 667 L--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDESALVP 726
Query: 728 EDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQ 787
EDQFLAQHPGP I VS PN +D GQ +EITVQ+L+E VGSLKEKIAGEIQ+PANKQ
Sbjct: 727 EDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQ 785
Query: 788 KLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
KLSGK GFLKDN+SLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 787 KLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785
BLAST of Sed0006467 vs. TAIR 10
Match:
AT1G14640.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein )
HSP 1 Score: 789.3 bits (2037), Expect = 3.0e-228
Identity = 469/778 (60.28%), Postives = 561/778 (72.11%), Query Frame = 0
Query: 8 ILTLPAPSEDSK------PVVHDEIIINNEV--DKDNSNSTPVSIATHTKTIGIIHPPPD 67
IL L AP D + DE I NE +++NS TP+++ATHT IGII+PPP+
Sbjct: 7 ILPLEAPPADGNLGPLPPSQLTDEEIKENEFQGEQNNSIQTPIAVATHTNPIGIIYPPPE 66
Query: 68 IRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSS 127
IR IV+ T QFV++NG F ++ A N F+FL S +PYH +Y+++++E+ +
Sbjct: 67 IRKIVETTAQFVSQNGLAFGNKVKTEKANNANFSFLKSDNPYHGFYRYKVTEYSCHIRDG 126
Query: 128 AQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEG 187
AQ V + P D AKPD+ A F+ RKILE PE E+YTVRLPEG
Sbjct: 127 AQ--------GTDVDDTEDPKLDDESD--AKPDLQAQFRAPRKILEAPEPEKYTVRLPEG 186
Query: 188 ITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKV 247
I ELDIIK TAQFVARNG+SFL L RE+NN QF F+KPTHSMF FFTSL DAYS+V
Sbjct: 187 IMEAELDIIKHTAQFVARNGQSFLRELMRREVNNSQFQFMKPTHSMFTFFTSLVDAYSEV 246
Query: 248 LMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHD 307
LMPP+ L EKL+KSV D+TTVLERC++RLEW+R Q++ + K EDE E+ER+QM MIDW D
Sbjct: 247 LMPPRDLKEKLRKSVADLTTVLERCLNRLEWDRFQEEEKNKEEDEKEKERVQMVMIDWKD 306
Query: 308 FVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEE-EIVEPGKEMEMDMDEEEMQLVE 367
F VVE+IDFAD+ED++LP PMTLEEVIR+SK+S EE EIVEPGKE+EMDMDEEE++LV
Sbjct: 307 FAVVESIDFADEEDKDLPMPMTLEEVIRRSKVSAMEEDEIVEPGKEVEMDMDEEEVKLVA 366
Query: 368 EGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGELI 427
EGMRA L E V+ + E PMRIVKNWKRPE+R TE++ +K V+S ITGELI
Sbjct: 367 EGMRAANLEEYVG-----SVEIEEEAPMRIVKNWKRPEDRFLTERDSSKVVISRITGELI 426
Query: 428 PINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTEE 487
PI EMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLARLRPDIFGTTEE
Sbjct: 427 PITEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEE 486
Query: 488 EVSNAVKAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLPGP 547
EVSNAVKA+IEKKD+QPKQVIWDGHTGSIGRTANQA++QN GE Q D D + PGP
Sbjct: 487 EVSNAVKADIEKKDEQPKQVIWDGHTGSIGRTANQALTQNSNGE-QGDGVYGDPNSFPGP 546
Query: 548 AAL-PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPPV 607
AA PP+PGVP+VRPLPPP LALNLP PP+ Y P P+P + M+ P+
Sbjct: 547 AAFPPPRPGVPTVRPLPPPQNLALNLPRPPPSVQY----------PGAPRPLGVPMMQPM 606
Query: 608 QPPH---LAIP-GHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPA 667
H ++ P GH S M+RPP + P M VPPPPGSQF+ + VP+P+ L
Sbjct: 607 YQQHQLSMSGPHGHPSMMMSRPPQMQPV-------MRVPPPPGSQFSHMQVPQPYGQL-- 666
Query: 668 PPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQ 727
PP MM PPPM + +PPPP PP EAPPPLPEEPEPKRQKLD+S LVPEDQ
Sbjct: 667 PPLSMGMMQPPPMAE-MPPPP---------PPGEAPPPLPEEPEPKRQKLDESALVPEDQ 726
Query: 728 FLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQK 772
FLAQHPGP I VS PN +D GQV+EITVQ+L+E VGSLKEKIAGE+Q+PANKQK
Sbjct: 727 FLAQHPGPATIRVSKPNEND----GQVMEITVQSLSENVGSLKEKIAGEMQIPANKQK 735
BLAST of Sed0006467 vs. TAIR 10
Match:
AT5G12280.1 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )
HSP 1 Score: 126.7 bits (317), Expect = 8.4e-29
Identity = 72/110 (65.45%), Postives = 84/110 (76.36%), Query Frame = 0
Query: 690 PPLPEEPEPKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLT 749
PPL E E + D+S+LVPEDQFLAQHPG I VSVP+ DD +V++ITVQ+L+
Sbjct: 314 PPLGGESE--EPEFDESVLVPEDQFLAQHPGSSTIMVSVPDPDD----WKVVKITVQSLS 373
Query: 750 ETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLS 800
E V SLKEKI+GEIQ P NKQKL GK GFLKDN SLA+YNVGAGE L+LS
Sbjct: 374 ENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNVGAGEILTLS 417
HSP 2 Score: 63.9 bits (154), Expect = 6.7e-10
Identity = 81/300 (27.00%), Postives = 122/300 (40.67%), Query Frame = 0
Query: 32 VDKDNSNSTPVSIATHTKTIGIIHPPPDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVK 91
++KDNSN P PP ++R +DK + VA+ G E++I+
Sbjct: 77 LEKDNSNEAPA------------EPPREMRIHMDKIARVVARKGLRIERKIM-------- 136
Query: 92 FNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSEAADSAASVSGSSGPAADSNETMVAKP 151
+SE+ A+NQ Q EA PA K
Sbjct: 137 ----------------NVSEYLAKNQDEGAQEPEA------------PA-------TLKG 196
Query: 152 DVSALFKPVRKILEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREI 211
D +P +L P + LPEG T E++D I LTAQ V R G+ F L
Sbjct: 197 DAQHYRRPF--LLSDPAPKFPDYVLPEGYTIEDVDTIFLTAQIVGRYGEEFWLDLIKEVD 256
Query: 212 NNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWE 271
N PQF FLKP S F +F L+ ++ +GL K + + M V + + L
Sbjct: 257 NKPQFEFLKPADSKFDYFNRLS------VVASEGLKRSEKLTSSRMAIVSKAFFYHL--- 308
Query: 272 RSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADDEDEELP---PPMTLEEVIRK 329
R Q++ R+ E + + + FV + FAD +DE+LP P ++ ++ K
Sbjct: 317 RRQNEKRELTHKEGAAKACTL-FGALYAFVGPDGC-FADIKDEDLPLLQHPSAIKNILTK 308
BLAST of Sed0006467 vs. TAIR 10
Match:
AT5G06520.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein )
HSP 1 Score: 118.2 bits (295), Expect = 3.0e-26
Identity = 103/298 (34.56%), Postives = 146/298 (48.99%), Query Frame = 0
Query: 34 KDNSNSTPVSIATHTKTIGIIHPPPDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFN 93
+ NSN P S+A I PPP+IRS V+ T V+KNG E E++++ + + +
Sbjct: 382 QSNSNKAPASVAP-------IEPPPEIRSCVENTALIVSKNGLEIERKMMELSMNDARHR 441
Query: 94 FLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDV 153
F+ S+DPYHA+YQ +L+E+RAQNQ A D +V S G
Sbjct: 442 FVWSTDPYHAFYQLKLAEYRAQNQDRAH------DIQPNVLRSFGFG------------- 501
Query: 154 SALFKPVRKILEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINN 213
E PE E IT +EL IIKLTAQF+AR G +F+ GL R + N
Sbjct: 502 ----------FEFPEKE---------ITLKELGIIKLTAQFMARYGMNFVQGLRKRVVGN 561
Query: 214 PQFHFLKPT-HSMFMFFTSLADAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWER 273
PQF FL+ T +S F F+ L AYS+VLMP K L KS TV++ + L+ E+
Sbjct: 562 PQFKFLESTNNSRFSFYNGLVIAYSRVLMPSK----MLSKSDDCTATVVDGFLSCLQLEK 617
Query: 274 SQDQARQKAEDEIEQERIQMAMIDWHD-FVVVEAIDFADDEDE------ELPPPMTLE 324
+E + + MID D F +E D++ + + ++ PP T E
Sbjct: 622 -------------REEGVDIDMIDLLDCFARLEDADYSANVPQPQHLSTQMQPPHTPE 617
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038884734.1 | 0.0e+00 | 92.25 | probable splicing factor 3A subunit 1 [Benincasa hispida] | [more] |
XP_008441262.1 | 0.0e+00 | 92.12 | PREDICTED: probable splicing factor 3A subunit 1 [Cucumis melo] >TYK06683.1 puta... | [more] |
XP_022137825.1 | 0.0e+00 | 91.13 | probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_02213... | [more] |
XP_022931984.1 | 0.0e+00 | 91.63 | probable splicing factor 3A subunit 1 [Cucurbita moschata] | [more] |
XP_022158817.1 | 0.0e+00 | 90.89 | probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_02215... | [more] |
Match Name | E-value | Identity | Description | |
Q8RXF1 | 1.3e-273 | 66.63 | Probable splicing factor 3A subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At1g146... | [more] |
Q8K4Z5 | 4.5e-112 | 37.57 | Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 | [more] |
A2VDN6 | 3.8e-111 | 37.38 | Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1 | [more] |
Q15459 | 3.8e-111 | 37.41 | Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1 | [more] |
Q86A14 | 6.8e-68 | 29.00 | Probable splicing factor 3A subunit 1 OS=Dictyostelium discoideum OX=44689 GN=sf... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C426 | 0.0e+00 | 92.12 | Putative splicing factor 3A subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A1S3B308 | 0.0e+00 | 92.12 | probable splicing factor 3A subunit 1 OS=Cucumis melo OX=3656 GN=LOC103485445 PE... | [more] |
A0A6J1C7R8 | 0.0e+00 | 91.13 | probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 ... | [more] |
A0A6J1DX59 | 0.0e+00 | 91.01 | probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 ... | [more] |
A0A6J1EVS5 | 0.0e+00 | 91.63 | probable splicing factor 3A subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111438... | [more] |
Match Name | E-value | Identity | Description | |
AT1G14650.1 | 9.5e-275 | 66.63 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin fa... | [more] |
AT1G14650.2 | 9.5e-275 | 66.63 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin fa... | [more] |
AT1G14640.1 | 3.0e-228 | 60.28 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | [more] |
AT5G12280.1 | 8.4e-29 | 65.45 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein | [more] |
AT5G06520.1 | 3.0e-26 | 34.56 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | [more] |