Homology
BLAST of Sed0006442 vs. NCBI nr
Match:
XP_023540929.1 (pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pepo] >XP_023540930.1 pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pepo] >XP_023540931.1 pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pepo] >XP_023540932.1 pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1639.4 bits (4244), Expect = 0.0e+00
Identity = 792/896 (88.39%), Postives = 849/896 (94.75%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPPK NFN SPE++QE+LRSSLLKALSS+KNT+QLR VHS I++SGF LSVVFSGKL
Sbjct: 1 MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGFGLSVVFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQLKDP SSVSVFR+VSPTRNVYQWNSIIRALT NGLFTQALGYYTEMR+TKL+PD
Sbjct: 61 ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
A+TFPSVINSCAR+LDLKMGR VHEHV EMGF+SDLYIGNAL+DMY RFGDLENARY+FD
Sbjct: 121 AYTFPSVINSCARLLDLKMGRDVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMS+RDSVSWNSLISGYCSNGFW+ AL++Y++ RMIGMVPDCFT+SSVLLACGSL AVEE
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEEALDMYHKSRMIGMVPDCFTMSSVLLACGSLTAVEE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
GLKIH V+EKIGIGGD++ GNGLLSMYFKFERPRE GRVF+EMA KDSVTWNTMICG+S+
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFAEMAAKDSVTWNTMICGYSQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LG HEESVKLFM MIDEF PDVLSVTSTIRACGHLGDL++GK+VHKYLIGRGYECD VAC
Sbjct: 301 LGWHEESVKLFMAMIDEFVPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFDTM CKDSVTWNSLINGYTQ GY+KEGVENFK+MKRE+KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNCKDSVTWNSLINGYTQRGYFKEGVENFKMMKRESKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLS+ SQLADI+QGRGIHCDVIK GFEDEL+IGNAL+DMY+KC +DDLLKAF
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYMR D+ISWNTLIASSVHFDDCT+GFRAINEMRTEGLMPDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIH CIFKLG E DVPIGNALIEMYSKCGSLE C++VFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDMESSGV+PDSVAFIA IFA SHSGMVK+GL+ FDRMKTDYNIEP+
Sbjct: 601 MYGEGKKALKAFQDMESSGVMPDSVAFIALIFAFSHSGMVKDGLAFFDRMKTDYNIEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLA+AEEFILSMPMKPDASLWGALLSACRA SGH DIAQRVS QIL
Sbjct: 661 EHYACVVDLLARSGLLARAEEFILSMPMKPDASLWGALLSACRA-SGHTDIAQRVSNQIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
QLNSDNTGYYVLVSN+YATLGKWDQVR+VRN++K KGLKKEPGSSWIEIQKRVYVFRTSD
Sbjct: 721 QLNSDNTGYYVLVSNVYATLGKWDQVRLVRNTMKNKGLKKEPGSSWIEIQKRVYVFRTSD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKV+DFLEYL GLMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVRDFLEYLTGLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFK GTCSCGDHW
Sbjct: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKDGTCSCGDHW 895
BLAST of Sed0006442 vs. NCBI nr
Match:
KAG6597217.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1639.0 bits (4243), Expect = 0.0e+00
Identity = 791/896 (88.28%), Postives = 849/896 (94.75%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPPK NFN SPE++QE+LRSSLLKALSS+KNT+QLR VHS I++SG LSVVFSGKL
Sbjct: 1 MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGLGLSVVFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQLKDP SSVSVFR+VSPTRNVYQWNSIIRALT NGLFTQALGYYTEMR+TKL+PD
Sbjct: 61 ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
A+TFPSVINSCARILDLKMGR+VHEHV EMGF+SDLYIGNAL+DMY RFGDLENARY+FD
Sbjct: 121 AYTFPSVINSCARILDLKMGRVVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMSDRDSVSWNSLISGYCSNGFW+ AL++Y++ R+IGMVPDCFT+SSVLLACGSL AVEE
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRIIGMVPDCFTMSSVLLACGSLTAVEE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
GLKIH V+EKIGIGGD++ GNGLLSMYFKFERPRE GRVF+EMA KDSVTWNTMICG+S+
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFTEMAAKDSVTWNTMICGYSQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LG HEESVKLFM MIDEF PDVLSVTSTIRACGHLGDL++GK+VHKYLIGRGYECD VAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFDTM CKDSVTWNSLINGYTQ GYYKEG+ENFK+MKRE+KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNCKDSVTWNSLINGYTQRGYYKEGMENFKIMKRESKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLS+ SQLADI+QGRGIHCDVIK GFEDEL+IGNAL+DMY+KC +DDLLKAF
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYMR D+ISWNTLIASSVHFDDCT+G+RAI+EMRTEGLMPDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGYRAISEMRTEGLMPDEATILGILPMCSLLAARR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIH CIFKLG E DVPIGNALIEMYSKCGSLE C++VFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDMESSGVIPDSVAFIA IFA SHSGMVK+GL+ FDRMKTDYNIEP+
Sbjct: 601 MYGEGKKALKAFQDMESSGVIPDSVAFIALIFAFSHSGMVKDGLAFFDRMKTDYNIEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLA+AEEFILSMPMKPDASLWGALLSACRA SGH DIAQRVS QIL
Sbjct: 661 EHYACVVDLLARSGLLARAEEFILSMPMKPDASLWGALLSACRA-SGHTDIAQRVSNQIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
QLNSDNTGYYVLVSN+YATLGKWDQVR+VRN++K KGLKKEPGSSWIEIQKRVYVFRTSD
Sbjct: 721 QLNSDNTGYYVLVSNVYATLGKWDQVRLVRNTMKNKGLKKEPGSSWIEIQKRVYVFRTSD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKV+DFLEYL GLMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVRDFLEYLTGLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFK GTCSCGDHW
Sbjct: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKDGTCSCGDHW 895
BLAST of Sed0006442 vs. NCBI nr
Match:
KAG7028688.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1637.5 bits (4239), Expect = 0.0e+00
Identity = 790/896 (88.17%), Postives = 849/896 (94.75%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPPK NFN SPE++QE+LRSSLLKALSS+KNT+QLR VHS I++SG LSVVFSGKL
Sbjct: 1 MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGLGLSVVFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQLKDP SSVSVFR+VSPTRNVYQWNSIIRALT NGLFTQALGYYTEMR+TKL+PD
Sbjct: 61 ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
A+TFPSVINSCARILDLKMGR+VHEHV EMGF+SDLYIGNAL+DMY RFGDLENARY+FD
Sbjct: 121 AYTFPSVINSCARILDLKMGRVVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMSDRDSVSWNSLISGYCSNGFW+ AL++Y++ RMIGMVPDCFT+SSVLLACGSL AVEE
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRMIGMVPDCFTMSSVLLACGSLTAVEE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
GLKIH V+EKIGIGGD++ GNGLLSMYFKFERPRE GRVF+EMA KDSVTWNTMICG+S+
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFTEMAAKDSVTWNTMICGYSQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LG HEESVKLFM MIDEF PDVLSVTSTIRACGHLGDL++GK+VHKYLIGRGYECD VAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFDTM CKDSVTWNSLINGYTQ GYYK+G+ENFK+MKRE+KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNCKDSVTWNSLINGYTQRGYYKKGMENFKIMKRESKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLS+ SQLADI+QGRGIHCDVIK GFEDEL+IGNAL+DMY+KC +DDLLKAF
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYMR D+ISWNTLIASSVHFDDCT+G+RAI+EMRTEGLMPDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGYRAISEMRTEGLMPDEATILGILPMCSLLAARR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIH CIFKLG E DVPIGNALIEMYSKCGSLE C++VFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDMESSGVIPDSVAFIA IFA SHSGMV++GL+ FDRMKTDYNIEP+
Sbjct: 601 MYGEGKKALKAFQDMESSGVIPDSVAFIALIFAFSHSGMVEDGLAFFDRMKTDYNIEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLA+AEEFILSMPMKPDASLWGALLSACRA SGH DIAQRVS QIL
Sbjct: 661 EHYACVVDLLARSGLLARAEEFILSMPMKPDASLWGALLSACRA-SGHTDIAQRVSNQIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
QLNSDNTGYYVLVSN+YATLGKWDQVR+VRN++K KGLKKEPGSSWIEIQKRVYVFRTSD
Sbjct: 721 QLNSDNTGYYVLVSNVYATLGKWDQVRLVRNTMKNKGLKKEPGSSWIEIQKRVYVFRTSD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKV+DFLEYL GLMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVRDFLEYLTGLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFK GTCSCGDHW
Sbjct: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKDGTCSCGDHW 895
BLAST of Sed0006442 vs. NCBI nr
Match:
XP_022949990.1 (pentatricopeptide repeat-containing protein At3g03580 [Cucurbita moschata] >XP_022949997.1 pentatricopeptide repeat-containing protein At3g03580 [Cucurbita moschata] >XP_022950002.1 pentatricopeptide repeat-containing protein At3g03580 [Cucurbita moschata])
HSP 1 Score: 1630.9 bits (4222), Expect = 0.0e+00
Identity = 787/896 (87.83%), Postives = 847/896 (94.53%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPPK NFN SPE++QE+LRSSLLKALSS+KNT+QLR VHS I++SG LSVVFSGKL
Sbjct: 1 MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGLGLSVVFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQLKDP SSVSVFR+VSPTRNVYQWNSIIRALT NGLFTQALGYYTEMR+TKL+PD
Sbjct: 61 ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
A+TFPSVINSCAR+LDLKMGR+VHEHV EMGF+SDLYIGNAL+DMY RFGDLENARY+FD
Sbjct: 121 AYTFPSVINSCARLLDLKMGRVVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMSDRDSVSWNSLISGYCSNGFW+ AL++Y++ R+IGMVPDCFT+SSVLLACGSL AVEE
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRIIGMVPDCFTMSSVLLACGSLTAVEE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
GLKIH V+EKIGIGGD++ GNGLLSMYFKFERPRE GRVF+EMA KDSVTWNTMICG+S+
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFTEMAAKDSVTWNTMICGYSQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LG HEESVKLFM MIDEF PDVLSVTSTIRACGHLGDL++GK+VHKYLIGRGYECD VAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFDTM KDSVTWNSLINGYTQ GYYKEG+ENFK+MKRE+KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNRKDSVTWNSLINGYTQRGYYKEGMENFKIMKRESKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLS+ SQLADI+QGRGIHCDVIK GFEDEL+IGNAL+DMY+KC +DDLLKAF
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYMR D+ISWNTLIASSVHFDDCT+G++AI+EMRTEGLMPDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGYQAISEMRTEGLMPDEATILGILPMCSLLAARR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIH CIFKLG E DVPIGNALIEMYSKCGSLE C++VFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDMESSGVIPDSVAFIA IFA SHSGMVK+GL+ FDRMKTDYNIEP+
Sbjct: 601 MYGEGKKALKAFQDMESSGVIPDSVAFIALIFAFSHSGMVKDGLAFFDRMKTDYNIEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLA+AEEFILSMPMKPDASLWGALLSACR SGH DIAQRVS QIL
Sbjct: 661 EHYACVVDLLARSGLLARAEEFILSMPMKPDASLWGALLSACR-VSGHTDIAQRVSNQIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
QLNSDNTGYYVLVSN+YATLGKWDQVR+VRN++K KGLKKEPGSSWIEIQKRVYVFRTSD
Sbjct: 721 QLNSDNTGYYVLVSNVYATLGKWDQVRLVRNTMKNKGLKKEPGSSWIEIQKRVYVFRTSD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKV+DFLEYL GLMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVRDFLEYLTGLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFK GTCSCGDHW
Sbjct: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKDGTCSCGDHW 895
BLAST of Sed0006442 vs. NCBI nr
Match:
XP_038897296.1 (pentatricopeptide repeat-containing protein At3g03580 [Benincasa hispida])
HSP 1 Score: 1624.4 bits (4205), Expect = 0.0e+00
Identity = 780/896 (87.05%), Postives = 843/896 (94.08%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
M PPK C NFN SPE+SQE +RSSLLKALSS+KNT+QLRTVHSLI+ SG ALSV+FSGKL
Sbjct: 1 MTPPKFCSNFNSSPETSQEFIRSSLLKALSSAKNTSQLRTVHSLIITSGLALSVIFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQLKDP SSVSVFR+VSPT NVYQWNSIIRALTHNGLFTQALGYYT+MR+ KL+PD
Sbjct: 61 ISKYAQLKDPISSVSVFRTVSPTHNVYQWNSIIRALTHNGLFTQALGYYTKMREKKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
AFTFPSVINSC R+LDLK GRIVHEH+VEMGF+SDLYIGNAL+DMYSR DL+NAR VF+
Sbjct: 121 AFTFPSVINSCGRLLDLKTGRIVHEHIVEMGFESDLYIGNALIDMYSRSVDLDNARNVFE 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMSDRD VSWNSLISGYC NGFW+ AL++Y++ RM GMVPDCFT+SSVLL+CGSL A++E
Sbjct: 181 EMSDRDRVSWNSLISGYCCNGFWEEALDMYHKSRMTGMVPDCFTMSSVLLSCGSLMAIKE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
G+ +H +EKIGIGGDVI GNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICG+S+
Sbjct: 241 GVTVHGAIEKIGIGGDVIIGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGYSQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LGRHEESVKLFMEMIDEFTPDVL++TSTIRACGHLGDLQVGKFVHKYLIG GYECD +AC
Sbjct: 301 LGRHEESVKLFMEMIDEFTPDVLTITSTIRACGHLGDLQVGKFVHKYLIGSGYECDTIAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFD+ KCKDSVTWNS+INGYTQSGYYKEGVE FK+MK E+KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDSTKCKDSVTWNSIINGYTQSGYYKEGVEKFKMMKMESKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLSIFSQLA+INQGRGIHCDVIKFGF+ EL+IGN+L+DMY+KC ++DLLK F
Sbjct: 421 DSVTFVLLLSIFSQLAEINQGRGIHCDVIKFGFDAELIIGNSLLDMYAKCGGMNDLLKMF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYMR HD+ISWNTLIASSVHFDDC +GFRAINEMRTEGL+PDEAT+LGILPM SLLA R+
Sbjct: 481 SYMRAHDIISWNTLIASSVHFDDCNVGFRAINEMRTEGLVPDEATVLGILPMSSLLAVRQ 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIHGCIFKLGFES VPIGNALIEMYSKCGSLE CS+VF+YMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHGCIFKLGFESHVPIGNALIEMYSKCGSLENCSKVFDYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDMESSGV PDSVAFIA IFACSHSGMVKEGL+ FDRMKTDYNIEP+
Sbjct: 601 MYGEGKKALKAFQDMESSGVFPDSVAFIAVIFACSHSGMVKEGLTFFDRMKTDYNIEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLAQAEEFILSMP+KPDASLWGALLSACRA SGH +IAQRVSKQIL
Sbjct: 661 EHYACVVDLLARSGLLAQAEEFILSMPLKPDASLWGALLSACRA-SGHTNIAQRVSKQIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
QLNSD+TGYYVLVSNIY+TLGKWDQVRMVRNS+KTKGLKKEPGSSWIEIQKR+YVFRT D
Sbjct: 721 QLNSDDTGYYVLVSNIYSTLGKWDQVRMVRNSMKTKGLKKEPGSSWIEIQKRIYVFRTGD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKVKD LEYL GLMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVKDLLEYLVGLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGSPLLVMKNLR CGDCHTVTKYITKIMQREILVRDANRFHLFK GTCSCGDHW
Sbjct: 841 TKPGSPLLVMKNLRACGDCHTVTKYITKIMQREILVRDANRFHLFKNGTCSCGDHW 895
BLAST of Sed0006442 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 1016.1 bits (2626), Expect = 2.4e-295
Identity = 483/872 (55.39%), Postives = 655/872 (75.11%), Query Frame = 0
Query: 27 KALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKLISKYAQLKDPFSSVSVFRSVSPTRNV 86
+ALSSS N +LR +H+L++ G S FSGKLI KY+ ++P SS+SVFR VSP +NV
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 87 YQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPDAFTFPSVINSCARILDLKMGRIVHEH 146
Y WNSIIRA + NGLF +AL +Y ++R++K+ PD +TFPSVI +CA + D +MG +V+E
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 147 VVEMGFDSDLYIGNALVDMYSRFGDLENARYVFDEMSDRDSVSWNSLISGYCSNGFWDGA 206
+++MGF+SDL++GNALVDMYSR G L AR VFDEM RD VSWNSLISGY S+G+++ A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 207 LNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEEGLKIHAVVEKIGIGGDVIAGNGLLSM 266
L +Y+E + +VPD FT+SSVL A G+L V++G +H K G+ V+ NGL++M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 267 YFKFERPREAGRVFSEMAVKDSVTWNTMICGHSKLGRHEESVKLFMEMIDEFTPDVLSVT 326
Y KF RP +A RVF EM V+DSV++NTMICG+ KL EESV++F+E +D+F PD+L+V+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVS 311
Query: 327 STIRACGHLGDLQVGKFVHKYLIGRGYECDIVACNILIDMYAKCGDLLAAQEVFDTMKCK 386
S +RACGHL DL + K+++ Y++ G+ + NILID+YAKCGD++ A++VF++M+CK
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 387 DSVTWNSLINGYTQSGYYKEGVENFKLMK-RETKPDSVTLVLLLSIFSQLADINQGRGIH 446
D+V+WNS+I+GY QSG E ++ FK+M E + D +T ++L+S+ ++LAD+ G+G+H
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431
Query: 447 CDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAFSYMRDHDVISWNTLIASSVHFDDCT 506
+ IK G +L + NAL+DMY+KC E+ D LK FS M D ++WNT+I++ V F D
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 507 IGFRAINEMRTEGLMPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPIGNALI 566
G + +MR ++PD AT L LPMC+ LAA+R GKEIH C+ + G+ES++ IGNALI
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 567 EMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFGMYGEGKKALKTFQDMESSGVIPDSV 626
EMYSKCG LE S VF M +DVVTWT +I A+GMYGEG+KAL+TF DME SG++PDSV
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 627 AFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKTKHYACVVDLLARSGLLAQAEEFILS 686
FIA I+ACSHSG+V EGL+ F++MKT Y I+P +HYACVVDLL+RS +++AEEFI +
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671
Query: 687 MPMKPDASLWGALLSACRATSGHMDIAQRVSKQILQLNSDNTGYYVLVSNIYATLGKWDQ 746
MP+KPDAS+W ++L ACR TSG M+ A+RVS++I++LN D+ GY +L SN YA L KWD+
Sbjct: 672 MPIKPDASIWASVLRACR-TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 731
Query: 747 VRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSDKSFEQYDKVKDFLEYLAGLMAKEGY 806
V ++R S+K K + K PG SWIE+ K V+VF + D S Q + + LE L LMAKEGY
Sbjct: 732 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 791
Query: 807 VADLQFALYDV-EEDDKKDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTK 866
+ D + ++ EE++K+ ++CGHSERLAIAFGLLNT+PG+PL VMKNLRVCGDCH VTK
Sbjct: 792 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 851
Query: 867 YITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
I+KI+ REILVRDANRFHLFK GTCSC D W
Sbjct: 852 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
BLAST of Sed0006442 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 595.5 bits (1534), Expect = 9.9e-169
Identity = 313/837 (37.40%), Postives = 491/837 (58.66%), Query Frame = 0
Query: 80 VSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPDAFTFPSVINSCARILDLKM 139
+S +R+ W ++R+ + L +A+ Y +M ++PD + FP+++ + A + D+++
Sbjct: 56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 140 GRIVHEHVVEMGFDSD-LYIGNALVDMYSRFGDLENARYVFDEMSDRDSVSWNSLISGYC 199
G+ +H HV + G+ D + + N LV++Y + GD VFD +S+R+ VSWNSLIS C
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 200 SNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVE---EGLKIHAVVEKIGIGG 259
S W+ AL + + P FTL SV+ AC +L E G ++HA + G
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235
Query: 260 DVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSKLGRHEESVKLFMEMI 319
I N L++MY K + + + +D VTWNT++ + + E+++ EM+
Sbjct: 236 SFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 295
Query: 320 DE-FTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRG-YECDIVACNILIDMYAKCGDL 379
E PD +++S + AC HL L+ GK +H Y + G + + + L+DMY C +
Sbjct: 296 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 355
Query: 380 LAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRET--KPDSVTLVLLLSI 439
L+ + VFD M + WN++I GY+Q+ + KE + F M+ +S T+ ++
Sbjct: 356 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 415
Query: 440 FSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAFSYMRDHDVISW 499
+ ++ IH V+K G + + + N LMDMYS+ ++D ++ F M D D+++W
Sbjct: 416 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 475
Query: 500 NTLIAS---SVHFDDCTIGFRAINEMRTE--------GLMPDEATILGILPMCSLLAARR 559
NT+I S H +D + + + + L P+ T++ ILP C+ L+A
Sbjct: 476 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 535
Query: 560 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 619
+GKEIH K +DV +G+AL++MY+KCG L+ +VF+ + +K+V+TW +I A+G
Sbjct: 536 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 595
Query: 620 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 679
M+G G++A+ + M GV P+ V FI+ ACSHSGMV EGL +F MK DY +EP +
Sbjct: 596 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 655
Query: 680 KHYACVVDLLARSGLLAQAEEFILSMPMK-PDASLWGALLSACRATSGHMDIAQRVSKQI 739
HYACVVDLL R+G + +A + + MP A W +LL A R +++I + ++ +
Sbjct: 656 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR-IHNNLEIGEIAAQNL 715
Query: 740 LQLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTS 799
+QL + +YVL++NIY++ G WD+ VR ++K +G++KEPG SWIE V+ F
Sbjct: 716 IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAG 775
Query: 800 DKSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLL 859
D S Q +K+ +LE L M KEGYV D L++VEED+K+ +LCGHSE+LAIAFG+L
Sbjct: 776 DSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGIL 835
Query: 860 NTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
NT PG+ + V KNLRVC DCH TK+I+KI+ REI++RD RFH FK GTCSCGD+W
Sbjct: 836 NTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of Sed0006442 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 587.4 bits (1513), Expect = 2.7e-166
Identity = 298/858 (34.73%), Postives = 492/858 (57.34%), Query Frame = 0
Query: 41 VHSLIVVSGFALSVVFSGKLISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNG 100
+H+ I+ G S V LI Y++ + VF + ++ W ++I L+ N
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR-LKDHSSWVAMISGLSKNE 268
Query: 101 LFTQALGYYTEMRQTKLRPDAFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGN 160
+A+ + +M + P + F SV+++C +I L++G +H V+++GF SD Y+ N
Sbjct: 269 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 328
Query: 161 ALVDMYSRFGDLENARYVFDEMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVP 220
ALV +Y G+L +A ++F MS RD+V++N+LI+G G+ + A+ ++ + G+ P
Sbjct: 329 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 388
Query: 221 DCFTLSSVLLACGSLAAVEEGLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVF 280
D TL+S+++AC + + G ++HA K+G + LL++Y K A F
Sbjct: 389 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 448
Query: 281 SEMAVKDSVTWNTMICGHSKLGRHEESVKLFMEM-IDEFTPDVLSVTSTIRACGHLGDLQ 340
E V++ V WN M+ + L S ++F +M I+E P+ + S ++ C LGDL+
Sbjct: 449 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 508
Query: 341 VGKFVHKYLIGRGYECDIVACNILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYT 400
+G+ +H +I ++ + C++LIDMYAK G L A ++ KD V+W ++I GYT
Sbjct: 509 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 568
Query: 401 QSGYYKEGVENFK-LMKRETKPDSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELV 460
Q + + + F+ ++ R + D V L +S + L + +G+ IH GF +L
Sbjct: 569 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 628
Query: 461 IGNALMDMYSKCSELDDLLKAFSYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEG 520
NAL+ +YS+C ++++ AF D I+WN L++ + R M EG
Sbjct: 629 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 688
Query: 521 LMPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCS 580
+ + T + S A +QGK++H I K G++S+ + NALI MY+KCGS+
Sbjct: 689 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 748
Query: 581 EVFNYMKEKDVVTWTALISAFGMYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSG 640
+ F + K+ V+W A+I+A+ +G G +AL +F M S V P+ V + + ACSH G
Sbjct: 749 KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 808
Query: 641 MVKEGLSLFDRMKTDYNIEPKTKHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGAL 700
+V +G++ F+ M ++Y + PK +HY CVVD+L R+GLL++A+EFI MP+KPDA +W L
Sbjct: 809 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTL 868
Query: 701 LSACRATSGHMDIAQRVSKQILQLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGL 760
LSAC +M+I + + +L+L +++ YVL+SN+YA KWD + R +K KG+
Sbjct: 869 LSAC-VVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 928
Query: 761 KKEPGSSWIEIQKRVYVFRTSDKSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEE 820
KKEPG SWIE++ ++ F D++ D++ ++ + L ++ GYV D L +++
Sbjct: 929 KKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQH 988
Query: 821 DDKKDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRD 880
+ K ++ HSE+LAI+FGLL+ P+ VMKNLRVC DCH K+++K+ REI+VRD
Sbjct: 989 EQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRD 1048
Query: 881 ANRFHLFKGGTCSCGDHW 897
A RFH F+GG CSC D+W
Sbjct: 1049 AYRFHHFEGGACSCKDYW 1064
BLAST of Sed0006442 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 586.3 bits (1510), Expect = 6.0e-166
Identity = 296/784 (37.76%), Postives = 477/784 (60.84%), Query Frame = 0
Query: 120 DAFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVF 179
D T SV+ CA LK G+ V + GF D +G+ L MY+ GDL+ A VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 180 DEMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVE 239
DE+ ++ WN L++ +G + G++ ++ + G+ D +T S V + SL +V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 240 EGLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHS 299
G ++H + K G G GN L++ Y K +R A +VF EM +D ++WN++I G+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 300 KLGRHEESVKLFMEM-IDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIV 359
G E+ + +F++M + D+ ++ S C + +G+ VH + + +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 360 ACNILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRE- 419
CN L+DMY+KCGDL +A+ VF M + V++ S+I GY + G E V+ F+ M+ E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 420 TKPDSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLL 479
PD T+ +L+ ++ +++G+ +H + + ++ + NALMDMY+KC + +
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 480 KAFSYMRDHDVISWNTLI---ASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCS 539
FS MR D+ISWNT+I + + + ++ F + E + PDE T+ +LP C+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR--FSPDERTVACVLPACA 512
Query: 540 LLAARRQGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTA 599
L+A +G+EIHG I + G+ SD + N+L++MY+KCG+L +F+ + KD+V+WT
Sbjct: 513 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 572
Query: 600 LISAFGMYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDY 659
+I+ +GM+G GK+A+ F M +G+ D ++F++ ++ACSHSG+V EG F+ M+ +
Sbjct: 573 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 632
Query: 660 NIEPKTKHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDI--A 719
IEP +HYAC+VD+LAR+G L +A FI +MP+ PDA++WGALL CR H D+ A
Sbjct: 633 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI---HHDVKLA 692
Query: 720 QRVSKQILQLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKR 779
++V++++ +L +NTGYYVL++NIYA KW+QV+ +R I +GL+K PG SWIEI+ R
Sbjct: 693 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 752
Query: 780 VYVFRTSDKSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERL 839
V +F D S + + ++ FL + M +EGY ++AL D EE +K++ LCGHSE+L
Sbjct: 753 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 812
Query: 840 AIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSC 897
A+A G++++ G + V KNLRVCGDCH + K+++K+ +REI++RD+NRFH FK G CSC
Sbjct: 813 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 871
BLAST of Sed0006442 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 575.5 bits (1482), Expect = 1.1e-162
Identity = 311/878 (35.42%), Postives = 509/878 (57.97%), Query Frame = 0
Query: 25 LLKALSSSKNTTQLRTVHSLIVVSGFALSVVF-SGKLISKYAQLKDPFSSVSVFRSVSPT 84
+L+ + +Q R +HS I + + + F +GKL+ Y + + VF + P
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM-PD 145
Query: 85 RNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPDAFTFPSVINSCARILDLKMGRIV 144
R + WN++I A NG AL Y MR + +FP+++ +CA++ D++ G +
Sbjct: 146 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 205
Query: 145 HEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFDEMSDR-DSVSWNSLISGYCSNGF 204
H +V++G+ S +I NALV MY++ DL AR +FD ++ D+V WNS++S Y ++G
Sbjct: 206 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 265
Query: 205 WDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEEGLKIHAVVEKIGI-GGDVIAGN 264
L ++ E M G P+ +T+ S L AC + + G +IHA V K ++ N
Sbjct: 266 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 325
Query: 265 GLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSKLGRHEESVKLFMEMIDE-FTP 324
L++MY + + +A R+ +M D VTWN++I G+ + ++E+++ F +MI
Sbjct: 326 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 385
Query: 325 DVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVACNILIDMYAKCGDLLAAQEVF 384
D +S+TS I A G L +L G +H Y+I G++ ++ N LIDMY+KC F
Sbjct: 386 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 445
Query: 385 DTMKCKDSVTWNSLINGYTQSGYYKEGVENFK-LMKRETKPDSVTLVLLLSIFSQLADIN 444
M KD ++W ++I GY Q+ + E +E F+ + K+ + D + L +L S L +
Sbjct: 446 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 505
Query: 445 QGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAFSYMRDHDVISWNTLIASSV 504
+ IHC +++ G D VI N L+D+Y KC + + F ++ DV+SW ++I+SS
Sbjct: 506 IVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 565
Query: 505 HFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVP 564
+ + M GL D +L IL + L+A +G+EIH + + GF +
Sbjct: 566 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 625
Query: 565 IGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFGMYGEGKKALKTFQDMESSG 624
I A+++MY+ CG L+ VF+ ++ K ++ +T++I+A+GM+G GK A++ F M
Sbjct: 626 IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 685
Query: 625 VIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKTKHYACVVDLLARSGLLAQA 684
V PD ++F+A ++ACSH+G++ EG M+ +Y +EP +HY C+VD+L R+ + +A
Sbjct: 686 VSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEA 745
Query: 685 EEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQILQLNSDNTGYYVLVSNIYAT 744
EF+ M +P A +W ALL+ACR+ S +I + ++++L+L N G VLVSN++A
Sbjct: 746 FEFVKMMKTEPTAEVWCALLAACRSHS-EKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 805
Query: 745 LGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSDKSFEQYDKVKDFLEYLAGL 804
G+W+ V VR +K G++K PG SWIE+ +V+ F DKS + ++ + L +
Sbjct: 806 QGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRK 865
Query: 805 MAKE-GYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGD 864
+ +E GYVAD +F L++V+E +K ML GHSER+AIA+GLL T + L + KNLRVC D
Sbjct: 866 LEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRD 925
Query: 865 CHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
CHT K ++K+ +R+I++RDANRFH F+ G CSCGD W
Sbjct: 926 CHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
BLAST of Sed0006442 vs. ExPASy TrEMBL
Match:
A0A6J1GDL7 (pentatricopeptide repeat-containing protein At3g03580 OS=Cucurbita moschata OX=3662 GN=LOC111453213 PE=3 SV=1)
HSP 1 Score: 1630.9 bits (4222), Expect = 0.0e+00
Identity = 787/896 (87.83%), Postives = 847/896 (94.53%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPPK NFN SPE++QE+LRSSLLKALSS+KNT+QLR VHS I++SG LSVVFSGKL
Sbjct: 1 MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGLGLSVVFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQLKDP SSVSVFR+VSPTRNVYQWNSIIRALT NGLFTQALGYYTEMR+TKL+PD
Sbjct: 61 ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
A+TFPSVINSCAR+LDLKMGR+VHEHV EMGF+SDLYIGNAL+DMY RFGDLENARY+FD
Sbjct: 121 AYTFPSVINSCARLLDLKMGRVVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMSDRDSVSWNSLISGYCSNGFW+ AL++Y++ R+IGMVPDCFT+SSVLLACGSL AVEE
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRIIGMVPDCFTMSSVLLACGSLTAVEE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
GLKIH V+EKIGIGGD++ GNGLLSMYFKFERPRE GRVF+EMA KDSVTWNTMICG+S+
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFTEMAAKDSVTWNTMICGYSQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LG HEESVKLFM MIDEF PDVLSVTSTIRACGHLGDL++GK+VHKYLIGRGYECD VAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFDTM KDSVTWNSLINGYTQ GYYKEG+ENFK+MKRE+KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNRKDSVTWNSLINGYTQRGYYKEGMENFKIMKRESKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLS+ SQLADI+QGRGIHCDVIK GFEDEL+IGNAL+DMY+KC +DDLLKAF
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYMR D+ISWNTLIASSVHFDDCT+G++AI+EMRTEGLMPDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGYQAISEMRTEGLMPDEATILGILPMCSLLAARR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIH CIFKLG E DVPIGNALIEMYSKCGSLE C++VFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDMESSGVIPDSVAFIA IFA SHSGMVK+GL+ FDRMKTDYNIEP+
Sbjct: 601 MYGEGKKALKAFQDMESSGVIPDSVAFIALIFAFSHSGMVKDGLAFFDRMKTDYNIEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLA+AEEFILSMPMKPDASLWGALLSACR SGH DIAQRVS QIL
Sbjct: 661 EHYACVVDLLARSGLLARAEEFILSMPMKPDASLWGALLSACR-VSGHTDIAQRVSNQIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
QLNSDNTGYYVLVSN+YATLGKWDQVR+VRN++K KGLKKEPGSSWIEIQKRVYVFRTSD
Sbjct: 721 QLNSDNTGYYVLVSNVYATLGKWDQVRLVRNTMKNKGLKKEPGSSWIEIQKRVYVFRTSD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKV+DFLEYL GLMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVRDFLEYLTGLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFK GTCSCGDHW
Sbjct: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKDGTCSCGDHW 895
BLAST of Sed0006442 vs. ExPASy TrEMBL
Match:
A0A6J1IH14 (pentatricopeptide repeat-containing protein At3g03580 OS=Cucurbita maxima OX=3661 GN=LOC111475085 PE=3 SV=1)
HSP 1 Score: 1619.0 bits (4191), Expect = 0.0e+00
Identity = 783/896 (87.39%), Postives = 840/896 (93.75%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPPK C NFN SPE++QEVLRSSLLKALSS+KNT+QLR +HS I++SG LSVVFSGKL
Sbjct: 1 MKPPKFCSNFNSSPETAQEVLRSSLLKALSSAKNTSQLRALHSWIIISGLGLSVVFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQLKDP SSVSVFR+VSPTRNVYQWNSIIRALT NGLFTQALGYYTEMR+TKL+PD
Sbjct: 61 ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
A+TFPSVINSCAR+LDLKMGR+VHEHV EMG +SDLYIGNAL+DMY RFGDLE ARY+FD
Sbjct: 121 AYTFPSVINSCARLLDLKMGRVVHEHVEEMGIESDLYIGNALIDMYCRFGDLEKARYMFD 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMSDRDSVSWNSLISGYCSNGFW+ AL++Y++ RM G+VPDCFT+SSVLLACGSL AVEE
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRMSGIVPDCFTMSSVLLACGSLTAVEE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
GLKIH V+EKIGIGGD++ GNGLLSMYFKFER RE GRVF+EMA KDSVTWNTMI G+S+
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERLRETGRVFAEMAAKDSVTWNTMIYGYSQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LG HEESVKLFM MIDEF PDVLSVTSTIRACGHLGDL++GK+VHKYLIGRGYECD VAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFDTM CKDSVTWNSLINGY Q YYKEGVENFK+MKRE+KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNCKDSVTWNSLINGYIQRVYYKEGVENFKMMKRESKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLS+ SQLADI+QGRGIHCDVIK GFEDEL+IGNAL+DMY+KC +DDL KAF
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLSKAF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYMR D+ISWNTLIASSVHFDDCT+GFRAINEMRTEGLMPDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIH CIF LG E DVPIGNALIEMYSKCGSLE C++VFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFNLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDMESSGVIPDSVAFIA IFA SHSGMVK+GL+ FDRMKTDYNIEP+
Sbjct: 601 MYGEGKKALKAFQDMESSGVIPDSVAFIALIFAFSHSGMVKDGLAFFDRMKTDYNIEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLA+AEEFILSMPMKPD SLWGALLSACRA SGH DIAQRVS QIL
Sbjct: 661 EHYACVVDLLARSGLLARAEEFILSMPMKPDVSLWGALLSACRA-SGHTDIAQRVSNQIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
QLNSDNTGYYVLVSN+YATLGKWDQVR+VRN++K KGLKKEPGSSWIEIQKRVYVFRTSD
Sbjct: 721 QLNSDNTGYYVLVSNVYATLGKWDQVRLVRNTMKNKGLKKEPGSSWIEIQKRVYVFRTSD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKV+DFLEYL GLMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVRDFLEYLTGLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGSPLLVMKNLRVCGDCHTVTKYITKI+QREILVRDANRFHLFK GTCSCGDHW
Sbjct: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIVQREILVRDANRFHLFKDGTCSCGDHW 895
BLAST of Sed0006442 vs. ExPASy TrEMBL
Match:
A0A0A0L4F4 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126920 PE=3 SV=1)
HSP 1 Score: 1590.9 bits (4118), Expect = 0.0e+00
Identity = 767/896 (85.60%), Postives = 833/896 (92.97%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPPK C NFN++PE SQE LRSSLLK LSS+KNT QLRTVHSLI+ SG +LSV+FSGKL
Sbjct: 1 MKPPKFCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQ+KDP SSVSVFRS+SPT NVY WNSIIRALTHNGLFTQALGYYTEMR+ KL+PD
Sbjct: 61 ISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
AFTFPSVINSCARILDL++G IVHEH +EMGF+SDLYIGNAL+DMYSRF DL+NARYVF+
Sbjct: 121 AFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFE 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMS+RDSVSWNSLISGYCSNGFW+ AL++Y+++RM GMVPDCFT+SSVLLACGSL AV+E
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
G+ +H V+EKIGI GDVI GNGLLSMYFKFER REA RVFS+MAVKDSVTWNTMICG+++
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LGRHE SVKLFM+MID F PD+LS+TSTIRACG GDLQVGKFVHKYLIG G+ECD VAC
Sbjct: 301 LGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFDT KCKDSVTWNSLINGYTQSGYYKEG+E+FK+MK E KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLSIFSQLADINQGRGIHCDVIKFGFE EL+IGN+L+D+Y+KC E+DDLLK F
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYM HD+ISWNT+IASSVHFDDCT+GF+ INEMRTEGLMPDEAT+LGILPMCSLLA RR
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIHG IFK GFES+VPIGNALIEMYSKCGSLE C +VF YMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDME SGV+PDSVAFIAFIFACSHSGMVKEGL FDRMKTDYN+EP+
Sbjct: 601 MYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRA G+ +IAQRVSK+IL
Sbjct: 661 EHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRA-RGNTNIAQRVSKKIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
+LNSD+TGYYVLVSNIYATLGKWDQV+ VRNS+KTKGLKKEPGSSWIEIQKRVYVFRT D
Sbjct: 721 ELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKVKD LEYL LMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFH FK G CSCGDHW
Sbjct: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895
BLAST of Sed0006442 vs. ExPASy TrEMBL
Match:
A0A6J1D0T4 (pentatricopeptide repeat-containing protein At3g03580 OS=Momordica charantia OX=3673 GN=LOC111016001 PE=3 SV=1)
HSP 1 Score: 1590.9 bits (4118), Expect = 0.0e+00
Identity = 771/896 (86.05%), Postives = 837/896 (93.42%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPP+ C FN SPE++QEVLRSSLLKALSS+KNT+QLR +HSLI++SG +LSVVFSGKL
Sbjct: 1 MKPPRFC--FNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKYAQLKDP SSVSVFR+VSPT NVYQWNSIIRA THNGLFTQALGYYTEMR+ KL+PD
Sbjct: 61 ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
A+TFPSVINSCAR+LDL MG +VHEHV+EMGF SDLYIGNAL+DMYSRFGDL+ ARYVF+
Sbjct: 121 AYTFPSVINSCARLLDLNMGHVVHEHVMEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMSDRDSVSWNSLISGYCSNGFW+ AL +Y++ RMIGMVPD FT +SVLLACGSL AV+E
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFT-TSVLLACGSLMAVKE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
GL +H +EKIGIG DVI GNGLLSMYFKFERPREAG+VF EM VKDSV+WNTMICG+S+
Sbjct: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVSWNTMICGYSQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LG++EESVKLFMEMID+FTPD+LSVTSTIRACGHL DLQVGK+VH YLIG GYECD VAC
Sbjct: 301 LGQYEESVKLFMEMIDKFTPDLLSVTSTIRACGHLADLQVGKYVHNYLIGSGYECDTVAC 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQ+VFD MKCKDSVTWNSLINGYTQ GYYKEGVE FK+MKRE +
Sbjct: 361 NILIDMYAKCGDLLAAQQVFDAMKCKDSVTWNSLINGYTQHGYYKEGVETFKMMKRENEL 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLS+FSQLA+I+QGRGIHCD+IK GFE ELVIGNAL+DMY+KC +DDLL+ F
Sbjct: 421 DSVTFVLLLSMFSQLANIDQGRGIHCDMIKLGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
+YMR HD+ISWNTLIASSVHFDDC+IGF+AI MRTEGL+PDEATILGILPMCSLLAARR
Sbjct: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAIIRMRTEGLIPDEATILGILPMCSLLAARR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIHGCIFKLGFESDVP GNALIEMYSKCGSLE C++VFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDMESSGV PDSVAFIA IFACSHSGMVKEGL+ FDRMKTDYNIEP
Sbjct: 601 MYGEGKKALKAFQDMESSGVFPDSVAFIALIFACSHSGMVKEGLTYFDRMKTDYNIEPMM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLAQAEEFILSMP+KPDASLWGALLSACRAT GH +IAQRVSKQIL
Sbjct: 661 EHYACVVDLLARSGLLAQAEEFILSMPIKPDASLWGALLSACRAT-GHTNIAQRVSKQIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
QLNSD+TGYYVLVSNIYATLGKWDQVRMVRNS+KTKGLKKEPGSSWIEIQKR YVFRT D
Sbjct: 721 QLNSDDTGYYVLVSNIYATLGKWDQVRMVRNSMKTKGLKKEPGSSWIEIQKRFYVFRTGD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKVKD LEYLAGLMAKEGYVADLQF+L+DVEEDDK+D+LCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVKDLLEYLAGLMAKEGYVADLQFSLHDVEEDDKRDILCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPG+PLLVMKNLRVCGDCHTVTKYITK+MQREILVRDANRFHLFK GTCSCGDHW
Sbjct: 841 TKPGTPLLVMKNLRVCGDCHTVTKYITKVMQREILVRDANRFHLFKDGTCSCGDHW 892
BLAST of Sed0006442 vs. ExPASy TrEMBL
Match:
A0A5A7TZN0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002920 PE=3 SV=1)
HSP 1 Score: 1578.1 bits (4085), Expect = 0.0e+00
Identity = 762/896 (85.04%), Postives = 834/896 (93.08%), Query Frame = 0
Query: 1 MKPPKLCFNFNHSPESSQEVLRSSLLKALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKL 60
MKPPK C NFN++PE SQE+LRSSLLK LSS+KNT QLRTVHSLI+ SG +LSV+FSGKL
Sbjct: 1 MKPPKFCSNFNNTPEPSQELLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKL 60
Query: 61 ISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPD 120
ISKY+Q+KDP SSVSVFRS+SPT NVY WNSIIRALTHNGLFTQALGYY EMR+ KL+PD
Sbjct: 61 ISKYSQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYHEMREKKLQPD 120
Query: 121 AFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFD 180
AFTFPSVINSCAR+LDL++G IVH+HV+EMGF+SDLYIGNAL+DMYSRF DL+NARYVF+
Sbjct: 121 AFTFPSVINSCARLLDLELGCIVHQHVMEMGFESDLYIGNALIDMYSRFVDLDNARYVFE 180
Query: 181 EMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEE 240
EMS+RDSVSWNSLISGYCSNGFW+ AL++Y+++RM GMVPD FT+SSVLLACGSL AV+E
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEEALDMYHKFRMTGMVPDYFTMSSVLLACGSLMAVKE 240
Query: 241 GLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSK 300
G+ +H V+EKIGI GDVI GNGLLSMYFKFER REA +FSEMAVKDSVTWNTMICG+++
Sbjct: 241 GVAVHGVIEKIGITGDVIIGNGLLSMYFKFERLREARWIFSEMAVKDSVTWNTMICGYAQ 300
Query: 301 LGRHEESVKLFMEMIDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVAC 360
LGRHEESVKLFMEMID F PD+LS+TSTIRACG G+LQ+GKFVHKYLIG G+ECD VA
Sbjct: 301 LGRHEESVKLFMEMIDGFIPDMLSITSTIRACGQSGNLQIGKFVHKYLIGSGFECDTVAN 360
Query: 361 NILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRETKP 420
NILIDMYAKCGDLLAAQEVFDT KCKDSVTWNSLINGYTQSGYYKEG+E+FK+MK E+KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMESKP 420
Query: 421 DSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAF 480
DSVT VLLLSIFSQLADINQGRGI CDVIKFGFE EL+IGN+L+DMY+KC E+DDLLK F
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIQCDVIKFGFEAELIIGNSLLDMYAKCGEMDDLLKVF 480
Query: 481 SYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540
SYM HD ISWNT+IASSVHFDDCT+GF+ INEMRTEGLMPDEAT+LGILPMCSLLA RR
Sbjct: 481 SYMSAHDNISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540
Query: 541 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 600
QGKEIHG IFKLGFES+VPIGNALIEMYSKCGSLE C++VFNYM+EKDVVTWTALISAFG
Sbjct: 541 QGKEIHGYIFKLGFESNVPIGNALIEMYSKCGSLENCTKVFNYMEEKDVVTWTALISAFG 600
Query: 601 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 660
MYGEGKKALK FQDME SGV PDSVAFIAFIFACSHSGMV EGL FDRMKTDYN+EP+
Sbjct: 601 MYGEGKKALKAFQDMELSGVFPDSVAFIAFIFACSHSGMVNEGLRFFDRMKTDYNLEPRM 660
Query: 661 KHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQIL 720
+HYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRA SG+ +IAQRVSK+IL
Sbjct: 661 EHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRA-SGNTNIAQRVSKKIL 720
Query: 721 QLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSD 780
+LNSDNTGYYVLVSNIYATLGKWDQV+MVRNS+KTKGLKK+PGSSWIEIQKRVYVFRT D
Sbjct: 721 ELNSDNTGYYVLVSNIYATLGKWDQVKMVRNSMKTKGLKKDPGSSWIEIQKRVYVFRTGD 780
Query: 781 KSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLN 840
KSFEQYDKVKD LEYL GLMAKEGYVADLQFAL+DVEEDDK+DMLCGHSERLAIAFGLLN
Sbjct: 781 KSFEQYDKVKDLLEYLVGLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLN 840
Query: 841 TKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
TKPGS LLVMKNLRVCGDCHTVTKYI+KIMQREILVRDANRFH FK G CSCGDHW
Sbjct: 841 TKPGSSLLVMKNLRVCGDCHTVTKYISKIMQREILVRDANRFHRFKDGACSCGDHW 895
BLAST of Sed0006442 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1016.1 bits (2626), Expect = 1.7e-296
Identity = 483/872 (55.39%), Postives = 655/872 (75.11%), Query Frame = 0
Query: 27 KALSSSKNTTQLRTVHSLIVVSGFALSVVFSGKLISKYAQLKDPFSSVSVFRSVSPTRNV 86
+ALSSS N +LR +H+L++ G S FSGKLI KY+ ++P SS+SVFR VSP +NV
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 87 YQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPDAFTFPSVINSCARILDLKMGRIVHEH 146
Y WNSIIRA + NGLF +AL +Y ++R++K+ PD +TFPSVI +CA + D +MG +V+E
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 147 VVEMGFDSDLYIGNALVDMYSRFGDLENARYVFDEMSDRDSVSWNSLISGYCSNGFWDGA 206
+++MGF+SDL++GNALVDMYSR G L AR VFDEM RD VSWNSLISGY S+G+++ A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 207 LNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVEEGLKIHAVVEKIGIGGDVIAGNGLLSM 266
L +Y+E + +VPD FT+SSVL A G+L V++G +H K G+ V+ NGL++M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 267 YFKFERPREAGRVFSEMAVKDSVTWNTMICGHSKLGRHEESVKLFMEMIDEFTPDVLSVT 326
Y KF RP +A RVF EM V+DSV++NTMICG+ KL EESV++F+E +D+F PD+L+V+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVS 311
Query: 327 STIRACGHLGDLQVGKFVHKYLIGRGYECDIVACNILIDMYAKCGDLLAAQEVFDTMKCK 386
S +RACGHL DL + K+++ Y++ G+ + NILID+YAKCGD++ A++VF++M+CK
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 387 DSVTWNSLINGYTQSGYYKEGVENFKLMK-RETKPDSVTLVLLLSIFSQLADINQGRGIH 446
D+V+WNS+I+GY QSG E ++ FK+M E + D +T ++L+S+ ++LAD+ G+G+H
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431
Query: 447 CDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAFSYMRDHDVISWNTLIASSVHFDDCT 506
+ IK G +L + NAL+DMY+KC E+ D LK FS M D ++WNT+I++ V F D
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 507 IGFRAINEMRTEGLMPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPIGNALI 566
G + +MR ++PD AT L LPMC+ LAA+R GKEIH C+ + G+ES++ IGNALI
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 567 EMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFGMYGEGKKALKTFQDMESSGVIPDSV 626
EMYSKCG LE S VF M +DVVTWT +I A+GMYGEG+KAL+TF DME SG++PDSV
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 627 AFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKTKHYACVVDLLARSGLLAQAEEFILS 686
FIA I+ACSHSG+V EGL+ F++MKT Y I+P +HYACVVDLL+RS +++AEEFI +
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671
Query: 687 MPMKPDASLWGALLSACRATSGHMDIAQRVSKQILQLNSDNTGYYVLVSNIYATLGKWDQ 746
MP+KPDAS+W ++L ACR TSG M+ A+RVS++I++LN D+ GY +L SN YA L KWD+
Sbjct: 672 MPIKPDASIWASVLRACR-TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 731
Query: 747 VRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSDKSFEQYDKVKDFLEYLAGLMAKEGY 806
V ++R S+K K + K PG SWIE+ K V+VF + D S Q + + LE L LMAKEGY
Sbjct: 732 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 791
Query: 807 VADLQFALYDV-EEDDKKDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTK 866
+ D + ++ EE++K+ ++CGHSERLAIAFGLLNT+PG+PL VMKNLRVCGDCH VTK
Sbjct: 792 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 851
Query: 867 YITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
I+KI+ REILVRDANRFHLFK GTCSC D W
Sbjct: 852 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
BLAST of Sed0006442 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 595.5 bits (1534), Expect = 7.1e-170
Identity = 313/837 (37.40%), Postives = 491/837 (58.66%), Query Frame = 0
Query: 80 VSPTRNVYQWNSIIRALTHNGLFTQALGYYTEMRQTKLRPDAFTFPSVINSCARILDLKM 139
+S +R+ W ++R+ + L +A+ Y +M ++PD + FP+++ + A + D+++
Sbjct: 56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 140 GRIVHEHVVEMGFDSD-LYIGNALVDMYSRFGDLENARYVFDEMSDRDSVSWNSLISGYC 199
G+ +H HV + G+ D + + N LV++Y + GD VFD +S+R+ VSWNSLIS C
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 200 SNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVE---EGLKIHAVVEKIGIGG 259
S W+ AL + + P FTL SV+ AC +L E G ++HA + G
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235
Query: 260 DVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSKLGRHEESVKLFMEMI 319
I N L++MY K + + + +D VTWNT++ + + E+++ EM+
Sbjct: 236 SFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 295
Query: 320 DE-FTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRG-YECDIVACNILIDMYAKCGDL 379
E PD +++S + AC HL L+ GK +H Y + G + + + L+DMY C +
Sbjct: 296 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 355
Query: 380 LAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRET--KPDSVTLVLLLSI 439
L+ + VFD M + WN++I GY+Q+ + KE + F M+ +S T+ ++
Sbjct: 356 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 415
Query: 440 FSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLLKAFSYMRDHDVISW 499
+ ++ IH V+K G + + + N LMDMYS+ ++D ++ F M D D+++W
Sbjct: 416 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 475
Query: 500 NTLIAS---SVHFDDCTIGFRAINEMRTE--------GLMPDEATILGILPMCSLLAARR 559
NT+I S H +D + + + + L P+ T++ ILP C+ L+A
Sbjct: 476 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 535
Query: 560 QGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFG 619
+GKEIH K +DV +G+AL++MY+KCG L+ +VF+ + +K+V+TW +I A+G
Sbjct: 536 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 595
Query: 620 MYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKT 679
M+G G++A+ + M GV P+ V FI+ ACSHSGMV EGL +F MK DY +EP +
Sbjct: 596 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 655
Query: 680 KHYACVVDLLARSGLLAQAEEFILSMPMK-PDASLWGALLSACRATSGHMDIAQRVSKQI 739
HYACVVDLL R+G + +A + + MP A W +LL A R +++I + ++ +
Sbjct: 656 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR-IHNNLEIGEIAAQNL 715
Query: 740 LQLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTS 799
+QL + +YVL++NIY++ G WD+ VR ++K +G++KEPG SWIE V+ F
Sbjct: 716 IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAG 775
Query: 800 DKSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLL 859
D S Q +K+ +LE L M KEGYV D L++VEED+K+ +LCGHSE+LAIAFG+L
Sbjct: 776 DSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGIL 835
Query: 860 NTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
NT PG+ + V KNLRVC DCH TK+I+KI+ REI++RD RFH FK GTCSCGD+W
Sbjct: 836 NTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of Sed0006442 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 587.4 bits (1513), Expect = 1.9e-167
Identity = 298/858 (34.73%), Postives = 492/858 (57.34%), Query Frame = 0
Query: 41 VHSLIVVSGFALSVVFSGKLISKYAQLKDPFSSVSVFRSVSPTRNVYQWNSIIRALTHNG 100
+H+ I+ G S V LI Y++ + VF + ++ W ++I L+ N
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR-LKDHSSWVAMISGLSKNE 268
Query: 101 LFTQALGYYTEMRQTKLRPDAFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGN 160
+A+ + +M + P + F SV+++C +I L++G +H V+++GF SD Y+ N
Sbjct: 269 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 328
Query: 161 ALVDMYSRFGDLENARYVFDEMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVP 220
ALV +Y G+L +A ++F MS RD+V++N+LI+G G+ + A+ ++ + G+ P
Sbjct: 329 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 388
Query: 221 DCFTLSSVLLACGSLAAVEEGLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVF 280
D TL+S+++AC + + G ++HA K+G + LL++Y K A F
Sbjct: 389 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 448
Query: 281 SEMAVKDSVTWNTMICGHSKLGRHEESVKLFMEM-IDEFTPDVLSVTSTIRACGHLGDLQ 340
E V++ V WN M+ + L S ++F +M I+E P+ + S ++ C LGDL+
Sbjct: 449 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 508
Query: 341 VGKFVHKYLIGRGYECDIVACNILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYT 400
+G+ +H +I ++ + C++LIDMYAK G L A ++ KD V+W ++I GYT
Sbjct: 509 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 568
Query: 401 QSGYYKEGVENFK-LMKRETKPDSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELV 460
Q + + + F+ ++ R + D V L +S + L + +G+ IH GF +L
Sbjct: 569 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 628
Query: 461 IGNALMDMYSKCSELDDLLKAFSYMRDHDVISWNTLIASSVHFDDCTIGFRAINEMRTEG 520
NAL+ +YS+C ++++ AF D I+WN L++ + R M EG
Sbjct: 629 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 688
Query: 521 LMPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCS 580
+ + T + S A +QGK++H I K G++S+ + NALI MY+KCGS+
Sbjct: 689 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 748
Query: 581 EVFNYMKEKDVVTWTALISAFGMYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSG 640
+ F + K+ V+W A+I+A+ +G G +AL +F M S V P+ V + + ACSH G
Sbjct: 749 KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 808
Query: 641 MVKEGLSLFDRMKTDYNIEPKTKHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGAL 700
+V +G++ F+ M ++Y + PK +HY CVVD+L R+GLL++A+EFI MP+KPDA +W L
Sbjct: 809 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTL 868
Query: 701 LSACRATSGHMDIAQRVSKQILQLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGL 760
LSAC +M+I + + +L+L +++ YVL+SN+YA KWD + R +K KG+
Sbjct: 869 LSAC-VVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 928
Query: 761 KKEPGSSWIEIQKRVYVFRTSDKSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEE 820
KKEPG SWIE++ ++ F D++ D++ ++ + L ++ GYV D L +++
Sbjct: 929 KKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQH 988
Query: 821 DDKKDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRD 880
+ K ++ HSE+LAI+FGLL+ P+ VMKNLRVC DCH K+++K+ REI+VRD
Sbjct: 989 EQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRD 1048
Query: 881 ANRFHLFKGGTCSCGDHW 897
A RFH F+GG CSC D+W
Sbjct: 1049 AYRFHHFEGGACSCKDYW 1064
BLAST of Sed0006442 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 586.3 bits (1510), Expect = 4.3e-167
Identity = 296/784 (37.76%), Postives = 477/784 (60.84%), Query Frame = 0
Query: 120 DAFTFPSVINSCARILDLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVF 179
D T SV+ CA LK G+ V + GF D +G+ L MY+ GDL+ A VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 180 DEMSDRDSVSWNSLISGYCSNGFWDGALNVYYEYRMIGMVPDCFTLSSVLLACGSLAAVE 239
DE+ ++ WN L++ +G + G++ ++ + G+ D +T S V + SL +V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 240 EGLKIHAVVEKIGIGGDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHS 299
G ++H + K G G GN L++ Y K +R A +VF EM +D ++WN++I G+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 300 KLGRHEESVKLFMEM-IDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIV 359
G E+ + +F++M + D+ ++ S C + +G+ VH + + +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 360 ACNILIDMYAKCGDLLAAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMKRE- 419
CN L+DMY+KCGDL +A+ VF M + V++ S+I GY + G E V+ F+ M+ E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 420 TKPDSVTLVLLLSIFSQLADINQGRGIHCDVIKFGFEDELVIGNALMDMYSKCSELDDLL 479
PD T+ +L+ ++ +++G+ +H + + ++ + NALMDMY+KC + +
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 480 KAFSYMRDHDVISWNTLI---ASSVHFDDCTIGFRAINEMRTEGLMPDEATILGILPMCS 539
FS MR D+ISWNT+I + + + ++ F + E + PDE T+ +LP C+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR--FSPDERTVACVLPACA 512
Query: 540 LLAARRQGKEIHGCIFKLGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTA 599
L+A +G+EIHG I + G+ SD + N+L++MY+KCG+L +F+ + KD+V+WT
Sbjct: 513 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 572
Query: 600 LISAFGMYGEGKKALKTFQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDY 659
+I+ +GM+G GK+A+ F M +G+ D ++F++ ++ACSHSG+V EG F+ M+ +
Sbjct: 573 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 632
Query: 660 NIEPKTKHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDI--A 719
IEP +HYAC+VD+LAR+G L +A FI +MP+ PDA++WGALL CR H D+ A
Sbjct: 633 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI---HHDVKLA 692
Query: 720 QRVSKQILQLNSDNTGYYVLVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKR 779
++V++++ +L +NTGYYVL++NIYA KW+QV+ +R I +GL+K PG SWIEI+ R
Sbjct: 693 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 752
Query: 780 VYVFRTSDKSFEQYDKVKDFLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERL 839
V +F D S + + ++ FL + M +EGY ++AL D EE +K++ LCGHSE+L
Sbjct: 753 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 812
Query: 840 AIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSC 897
A+A G++++ G + V KNLRVCGDCH + K+++K+ +REI++RD+NRFH FK G CSC
Sbjct: 813 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 871
BLAST of Sed0006442 vs. TAIR 10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 564.7 bits (1454), Expect = 1.3e-160
Identity = 297/765 (38.82%), Postives = 448/765 (58.56%), Query Frame = 0
Query: 136 DLKMGRIVHEHVVEMGFDSDLYIGNALVDMYSRFGDLENARYVFDEMSDRDSVSWNSLIS 195
+L+ + +H +V ++ I LV++Y G++ AR+ FD + +RD +WN +IS
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 196 GYCSNGFWDGALNVYYEYRM-IGMVPDCFTLSSVLLACGSLAAVEEGLKIHAVVEKIGIG 255
GY G + + + + G+ PD T SVL AC V +G KIH + K G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFM 185
Query: 256 GDVIAGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGHSKLGRHEESVKLFMEM 315
DV L+ +Y +++ A +F EM V+D +WN MI G+ + G +E++ L +
Sbjct: 186 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 245
Query: 316 IDEFTPDVLSVTSTIRACGHLGDLQVGKFVHKYLIGRGYECDIVACNILIDMYAKCGDLL 375
D ++V S + AC GD G +H Y I G E ++ N LID+YA+ G L
Sbjct: 246 ---RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 305
Query: 376 AAQEVFDTMKCKDSVTWNSLINGYTQSGYYKEGVENFKLMK-RETKPDSVTLVLLLSIFS 435
Q+VFD M +D ++WNS+I Y + + F+ M+ +PD +TL+ L SI S
Sbjct: 306 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 365
Query: 436 QLADINQGRGIHCDVIKFG-FEDELVIGNALMDMYSKCSELDDLLKAFSYMRDHDVISWN 495
QL DI R + ++ G F +++ IGNA++ MY+K +D F+++ + DVISWN
Sbjct: 366 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 425
Query: 496 TLIASSVHFDDCTIGFRAINEMRTEG-LMPDEATILGILPMCSLLAARRQGKEIHGCIFK 555
T+I+ + N M EG + ++ T + +LP CS A RQG ++HG + K
Sbjct: 426 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 485
Query: 556 LGFESDVPIGNALIEMYSKCGSLEKCSEVFNYMKEKDVVTWTALISAFGMYGEGKKALKT 615
G DV + +L +MY KCG LE +F + + V W LI+ G +G G+KA+
Sbjct: 486 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 545
Query: 616 FQDMESSGVIPDSVAFIAFIFACSHSGMVKEGLSLFDRMKTDYNIEPKTKHYACVVDLLA 675
F++M GV PD + F+ + ACSHSG+V EG F+ M+TDY I P KHY C+VD+
Sbjct: 546 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 605
Query: 676 RSGLLAQAEEFILSMPMKPDASLWGALLSACRATSGHMDIAQRVSKQILQLNSDNTGYYV 735
R+G L A +FI SM ++PDAS+WGALLSACR G++D+ + S+ + ++ ++ GY+V
Sbjct: 606 RAGQLETALKFIKSMSLQPDASIWGALLSACR-VHGNVDLGKIASEHLFEVEPEHVGYHV 665
Query: 736 LVSNIYATLGKWDQVRMVRNSIKTKGLKKEPGSSWIEIQKRVYVFRTSDKSFEQYDKVKD 795
L+SN+YA+ GKW+ V +R+ KGL+K PG S +E+ +V VF T +++ Y+++
Sbjct: 666 LLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYR 725
Query: 796 FLEYLAGLMAKEGYVADLQFALYDVEEDDKKDMLCGHSERLAIAFGLLNTKPGSPLLVMK 855
L L + GYV D +F L DVE+D+K+ +L HSERLAIAF L+ T + + + K
Sbjct: 726 ELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFK 785
Query: 856 NLRVCGDCHTVTKYITKIMQREILVRDANRFHLFKGGTCSCGDHW 897
NLRVCGDCH+VTK+I+KI +REI+VRD+NRFH FK G CSCGD+W
Sbjct: 786 NLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023540929.1 | 0.0e+00 | 88.39 | pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pep... | [more] |
KAG6597217.1 | 0.0e+00 | 88.28 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG7028688.1 | 0.0e+00 | 88.17 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022949990.1 | 0.0e+00 | 87.83 | pentatricopeptide repeat-containing protein At3g03580 [Cucurbita moschata] >XP_0... | [more] |
XP_038897296.1 | 0.0e+00 | 87.05 | pentatricopeptide repeat-containing protein At3g03580 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9SS60 | 2.4e-295 | 55.39 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
Q7Y211 | 9.9e-169 | 37.40 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
Q9SVP7 | 2.7e-166 | 34.73 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 6.0e-166 | 37.76 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9M1V3 | 1.1e-162 | 35.42 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GDL7 | 0.0e+00 | 87.83 | pentatricopeptide repeat-containing protein At3g03580 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1IH14 | 0.0e+00 | 87.39 | pentatricopeptide repeat-containing protein At3g03580 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0L4F4 | 0.0e+00 | 85.60 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G1269... | [more] |
A0A6J1D0T4 | 0.0e+00 | 86.05 | pentatricopeptide repeat-containing protein At3g03580 OS=Momordica charantia OX=... | [more] |
A0A5A7TZN0 | 0.0e+00 | 85.04 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT3G03580.1 | 1.7e-296 | 55.39 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G57430.1 | 7.1e-170 | 37.40 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G13650.1 | 1.9e-167 | 34.73 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18750.1 | 4.3e-167 | 37.76 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G33990.1 | 1.3e-160 | 38.82 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |