Sed0006410 (gene) Chayote v1

Overview


Name	Sed0006410
Type	gene
Organism	Sechium edule (Chayote v1)
Description	small GTPase LIP1-like
Location	LG01: 694419 .. 700644 (+)
RNA-Seq Expression	Sed0006410
Synteny	Sed0006410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGGTTTTATTTCATCTGTCTCGCGCGCGCAGGGTTTATCTGACTGCACTCTCAAGTTTTCTTCTCTTTCAGATCTCATTTCCATAGCCATCTCCCAGATCGTCAATCCTCGCTTCATTTTTCATTCATCTCCAACCTTCAAACCCTAGCCTCTTGCTCGATTCCCGTTCGATTGGACATGGATTTTCCGATTTCACCTTTGATCTTCATCTAGTTCTCATGTGATATGGATTTCAGATTCAAATCGGATGTGCCTGTGCTGAGAAACTGCTCTTCGTCAAGGTTGTGCCAATTTGACGGTACTTAATTGTTGAATTCCTTCTTTCGAGGCGATTACGGTTTTGTAGGTGTTGAAGAAATCATGTTCTGGAAGGACCGTGATAGGGAGAGCAAAGAAATCAATGGAGCTCCTCTCTGTGGTCAGGTTCGAGTGCTTGTGGTTGGCGATTCAGGTGATTTTTCTTTCATTCTGCCTTTTATGATTGAATCTACTCATTGTTCTTCTGCTTTTGTTTTCCGTATTCTCTGTCGGCAGATACTTATTTCCACAGCTGAGTTCAGAGTTTAGGATGTGTGATTGTGAGGAGCTGATTGTGATCCTCTCGATAGAGTAACCTAACTTACAGGGAATCCGGAATTGTTCACATCTGAACTGAATTGGAACTTACTAGTAAACACGTCCAGAAAATTCAAAATTAGACCCTAAGCATATTCATCAGATCTGAGTTAATATATTCGAGAATAAGACTAGTTCTGAGCTGAATTTCAAATAGGTCGTCCACAAGGGGTGGCACAAGGGATTGAAGACTTGGGCTTTGAAGGTGTGGTCCCCCGAACTCACTTGTGACATTAATTTGTAGATACCTCCCATGTGTTCATTCGTTCGATGTCTCTCAGTGGTTACTCCGGGGATAGTGGAGCGAAGCTCTGATTTCTCGGTTTAAAAAAAAAAGAATTGCAAATAGGTCATCTTTCATCATCTAAAACTGCAAACAAGATACCCGTGCCAAAATGCTAATCAATCTTTATGTTTTAATTTCAGACCATAACTGATTTACTTAAGAATGTAACTGTGGGTGTTGATTTGATAATTTTTCATTCAATAATTCTCAAAAACTTTTCTAGGCTAGATAGTTTTTTTTTTAATGAAAGTACTGAACTTTCATTGCCTAATTTATATATGCATGTATGTTAATTAAGTCTATTGTTCGTAATTGGTTGACGACTTTAATAACTAGATTAGTCCCCAAGGGGTGGCACAGTGGTTGAAGACTTAGGCTTTGAGGGTATGCTCCCCTCAAGGTCCCAAGTTCGAAACTCAGCTATGACATTTCTCCTTCGATGTCTCCCGGTGCCTGGCCTAGGGACGGACGTGGTTACCTTTGTTTAAAAAAAAAAAGGACTTTAATAACTAGATGAAGTCTAATTTTATTATTGCTGCCTGGATTAGGCTTCTCTGAACAAAGTTTATTGCTTGTAATTTTTTTGAGTTCAACAACAATTAGGGGAGTGGGGGGATTGGAACCCACGACCTCTTTCTTGGTCATGGGCACACACTTATGCCGTGAGTTATTGCTCTTGTTGGTAGTTTATTGTTTGTCATTGGTTTATATTTAACATAAACATATAATTAATAATGCAAAAAATGATAAAGATTAGTCTATCATGTAGTTGAGTGCATATCTAAATTTCTGGCCATATTTCTTGATAAATTAGATTTCAATGTTTTCTAGGTGTGGGGAAAACTTCTCTCGTTCATCTAATTGTAAACGGTTCTTCCATTTCTTGCCCTTCTCAAACTATTGGCTGTACAGTTGGAGTTAAGGTAAGTCTCGCCTTCTGTCTCAAGTTACTCCAGTTATTCTTGAAAGTTCACTAATTATCAATTGTTCTATTTACTATTTTGGTAGCATATTACTTATGGAAATGCTGGTAGCTCTTCAAGTAGCATAACAGGTGATGCCGAGAGAGATTTCTTTGTTGAACTTTGGGATGTGTCAGGGCATGAGCGCTACAACGACTGTCGCTCTCTTTTCTATTCTCAAATTAATGGTAAGATCTTTGTACCTGCAGGTTTTTACATTCATTCTTAAAAATACTGGTGTGAATCTGTCTTATTCTTCAGCATGTTGCATAGACAATTCCAATAGGCACTATGTAGTCTGTACTAGTTTTTTTGCTAGGTATATCCTCGTGTTGTTGGCATATTTCTGAACTTTCTTAGCCTGCTAAGGCATTAGATGTTATATCAAATACAATTTGTGAGGCAAAATATTTATTGAAAAATAATTAACGATAAATAGATATGTAGATATGTAGTTGTAAATGAATATGCATAGTAATAAAAATTCATGTAAAATCTTAGAAGCATTTTTTTCTATGATCTGTATCGGTGTAAAAACAGGACTCCTTGTAACAAGCTTAAATTCTCCCTTAACAAATTTTTTTTGATAAGAAACAATTCATTGATAGTGAAATTAAGGAGCCAAAAGGCAATTACAACTCTCTTAACAAATTAAGGAATTATTTTCTAATTCCTTTGTATGGGTTTTACCTTTTGTATCCGAAAATGATTTCCTATCCGAAAATAAATAAATTAAAGAAAACATTCATGGCAACATGAACATTGCTCAATTGACTTAAGTGTGTGCTTGTGATCGAGGGGTCACGGGTTCAAATCCCTACTCCCAATGGAAAGAAATGATTTATACCAAAGAAAAAATATAGAAAGCTGGGAGAATCCTGGAGAAATAGTAGAGAAATTGTGATCTGGTGTGGACTTGTGGTTGTGCTGGGAATATGAAAAACAATGCAAGGGTTTTGTGTTTAGAATTAGGAACTTGTTCTGCTTTTTAACCGAAGCGCCTTAGTACTTCAACGGAAGGCATGTGTGCTAGAGTTGTGCCTAGCCTTAGGCTTGCACCTCTAGGTTCCTTTAAAATACTGACTCGGTTTGGGTTGCAAGCAATACAAGTACCCAGAGAAGGTAAAGTAATGCCTTGTTCTTCAATTTTTGAGAGCTTTCTTTTAGATTTCATGGCTTGAGAAGTTGAGAGAAACATTTGAATCTTCATCAAATTAGTCATTTGGGTGTTTGATTTCACTTTGTAGCTACAACCTTACTTGACAGAGTCTGTTTGTAGATGATCTTACGGGAACTATTTCTTGAGTTCTAACTCTAAGCATATCATTTGTACCTCTTTAACGGGGATATTCTATGTTCTTTCTAATACATACAGTTTAAGTTCTCTTAATGCCATTTGAAAGAAGTTCTTTGTAACTTGGCTTAGGGCTTGGCTTTTCTCCCTCTATTTTTTCTTTCTATATAGACATTTCCCCCCTTAAGTTTCTCATTTTTCTTGAAGTTTAAGTCATGTCCCTTTTCTCCTTTAATATTTCAATTAATACTTAAATTGTGTATGCAGGTGTCATTTTTGTTCATGATCTTTCACAGAGAAGAACAAAAGCAAGCCTACAGAAGTGGGCAGTTGATATTGCAACAGTTGGGACATTTTCAGCTCCCTTAGGATCTGGAGGTCCTGGTGGCCTTCCTGTGCCTTTTATTGTAATTGGTAACAAAGCGGATATTGTTGCTAATGAGGGTACTAGAGGAAGTAGTGGAAATCTAGTTGATGCTGCTCGCCAGTGGGTCGAGAAGCAGGGTCTGCTTCCCTTCAGTGAGGAAATTCCGTTAACTGAAAGTTTCCCTGGTGGTGGAGGACTTCTTGCTGTAAGAATTATAGTTTCTCCATCACATTTCTCATCCAAATTGATTATTAATATGTTTTTTAGATTGTTGGTGGTGGGTAATAGCTCTGAATTCTTTTATCAATTCCATTTCATTCATATCTTCTATACTTCGTATTTCTCCTGACATTTTGAAGTGAACGCTTTCTGCATTTGAAGAGTTTTGGATTACTTGAGATATGATTTTGTCTGATACAGCAATATAAAATAATGAATCAAACTTCTGCGAGCTTGGTTAGTTGACAATAGTGAACGTCGTGGTCGTAACTCGTAATAAAAAATAGCTCCCAATTCCTTTTGACTGTAATGAAAAATATAAAACTGTGAAGCTGCATAGTACTTTACTATTTCAATTGTCATCAGTCTTATGGTTGATATTCTGGACACAGGCTGCTAAAGAGGCGAGATATGACAAGGAAGCTGTAACTAAATTCTTCCGCATGGTCAGTTTTTATCATTTTATGTTCCTATTATCTTATTCACTGCCCTTTTTTCTTACCTCTAAATGATAACTCGTCTCCTCATACTATCCAATGTGCTGACTTTTTTTTTTCTTCAGCTCATCCGGAGAAGATATTTCTCAGATAGTTTACCAGCAGCCAACACTTGGTCCATGTCTCCAGTTCCAAAATCGGTACAGCGTCTAGATGACGGTATCAGTGATGAGGACCAGTCCTACAGTCGTTCAAGGTACTTCCATCAGAAAAACGTTTCTGCCTTTTCCCTCTACGCTTGCAAAGTTGCAACTGTTTTTTCTTCTTAAAACGTTAAGCTTTCTTGTTAAGGAGAGGGCGTTGATCTAATAGAAAGGTAATCCCAATACAGTTTGTCAGGGAGATTCTAGTCCCTGGTATACGTATATCCATTTTTTTTATCTCTATAAATTACGGTTGTCCTGCTGGGTTTTTTTTTCCATCACATCCATTTAAGTTCTCAACATCATAACCTTGGGTGAGAAATAAATGAAAAGTTACAAAAGAACGGTTTGATAAAATTATAATTATGCCAATGAGTCAATAGGGTAGAAAAGCTATAATCCTTAAAAGGTTTAGGGTTTAGGGGTCTCTAGGTTTAGTGGCTGAACAAGATATGTATGCCTTGAATTAGAACCGAAGTAATAACTAGAGCAGAGTAACTAGAGATGTATGAGACGATGAAAATGAATTTTTAGTTTTGCAACCATCCCCATTGATGAAATGATTTCATATGATTGATTGAATGTATATTAGTTTATTTTTCAGCTTATATCTTGACTAATAAACATAGCGTTGAAGGACAACTTTTGTAGGTGTAGAAGACACGTAGATTTGACTGAAATGCTGTCCTAGACATCTACTCTCACCCTCTTAAACTTTTTATTTTTTAATTTTAGAGATACAATGGATTAGCCCCGCCAAAATGCATTCTCAAACATATTTGAATATTAGAATGAAGCAAGTAGTACTGTTTTGAAGGGGATACCACGTTGGTAGAGGTTTGGACTTTGGAGTCTCCAATATATGCTCCTTTGGAGATCTTAGATTCAAAACTCACGAGTGAGCTTAATTGTAAGATTCATTGTTGTCTCTAGGCCTCGGCCTTGTAAAAAAAAATTGAATTCAACTTTGTAATTAGAAATTTCTTGGTAGTGCAAAAAAGATAAAGTAAAAAGAGGTTACTATATGTGAATCTTATTTAGAAAGTGTATAGTTAGTTACCTAAATGGCTGAAAAAAGAGTTATATACAAGTTCATCTTCGTAAGCGAATTGCAGAGTGCTCGTGATTCCACACAATCTCTTCCTTTACTTGCATTACCCTAACACTCGTTCATAGCTTATTGTACTGATGTCTAATTGCAGTTTTACCAGCGAAACGTACAAATACAACGCACTTCCTTCGCTCCCGGCACAGCGCAATCTTACTCCTCCCCCAACGCTTTACCCGCAGCAGCCATTTTCGGCTTCTGAAAACTACAACCTTCCGAAATTTGCTCTCCCAGCATCCCAGGAGTTCAACAATTTTACCAGATCGAAGCGCTCGGATATTAACGTATGATCAGTGAACGACAAGCTTGGGCAATAGCAATGGGTATGGTGTGGCATACTCTATACATGTAAGAGTTTGTCTGCACTTTGATTGATACGAAATCAGTTCATTAATTCTTTCATGGCTTCAGGGTTCTGTTTCTGTAACTGGTGTTTGATTCATAGTGTGCTTAATGACTTTAAAAACAACTACAAACCCATTCTTTTCGATCAAACTGGTGAAATTGTTTTGTTTACTATTGATGGAGGTAGAATTGGGAAATTAGATTAATTTTGGATAATTATTAGGTTAATTAATTTTACCCTCTTTGCCTTATAAATAGAAGGTTTTTATCATGTAATTCACAATCTTTTTATTATTATTAAAGAAAATTGGGTGTGTTTTTCTTTGAGAATTCTCCTTTTGTCCTTTTGGTTAATTTTACATGGTCAAGAGAGTCTTGTCAGTCCACG

mRNA sequence

GTCGGTTTTATTTCATCTGTCTCGCGCGCGCAGGGTTTATCTGACTGCACTCTCAAGTTTTCTTCTCTTTCAGATCTCATTTCCATAGCCATCTCCCAGATCGTCAATCCTCGCTTCATTTTTCATTCATCTCCAACCTTCAAACCCTAGCCTCTTGCTCGATTCCCGTTCGATTGGACATGGATTTTCCGATTTCACCTTTGATCTTCATCTAGTTCTCATGTGATATGGATTTCAGATTCAAATCGGATGTGCCTGTGCTGAGAAACTGCTCTTCGTCAAGGTTGTGCCAATTTGACGGTACTTAATTGTTGAATTCCTTCTTTCGAGGCGATTACGGTTTTGTAGGTGTTGAAGAAATCATGTTCTGGAAGGACCGTGATAGGGAGAGCAAAGAAATCAATGGAGCTCCTCTCTGTGGTCAGGTTCGAGTGCTTGTGGTTGGCGATTCAGGTGTGGGGAAAACTTCTCTCGTTCATCTAATTGTAAACGGTTCTTCCATTTCTTGCCCTTCTCAAACTATTGGCTGTACAGTTGGAGTTAAGCATATTACTTATGGAAATGCTGGTAGCTCTTCAAGTAGCATAACAGGTGATGCCGAGAGAGATTTCTTTGTTGAACTTTGGGATGTGTCAGGGCATGAGCGCTACAACGACTGTCGCTCTCTTTTCTATTCTCAAATTAATGGTGTCATTTTTGTTCATGATCTTTCACAGAGAAGAACAAAAGCAAGCCTACAGAAGTGGGCAGTTGATATTGCAACAGTTGGGACATTTTCAGCTCCCTTAGGATCTGGAGGTCCTGGTGGCCTTCCTGTGCCTTTTATTGTAATTGGTAACAAAGCGGATATTGTTGCTAATGAGGGTACTAGAGGAAGTAGTGGAAATCTAGTTGATGCTGCTCGCCAGTGGGTCGAGAAGCAGGGTCTGCTTCCCTTCAGTGAGGAAATTCCGTTAACTGAAAGTTTCCCTGGTGGTGGAGGACTTCTTGCTGCTGCTAAAGAGGCGAGATATGACAAGGAAGCTGTAACTAAATTCTTCCGCATGCTCATCCGGAGAAGATATTTCTCAGATAGTTTACCAGCAGCCAACACTTGGTCCATGTCTCCAGTTCCAAAATCGGTACAGCGTCTAGATGACGGTATCAGTGATGAGGACCAGTCCTACAGTCGTTCAAGTTTTACCAGCGAAACGTACAAATACAACGCACTTCCTTCGCTCCCGGCACAGCGCAATCTTACTCCTCCCCCAACGCTTTACCCGCAGCAGCCATTTTCGGCTTCTGAAAACTACAACCTTCCGAAATTTGCTCTCCCAGCATCCCAGGAGTTCAACAATTTTACCAGATCGAAGCGCTCGGATATTAACGTATGATCAGTGAACGACAAGCTTGGGCAATAGCAATGGGTATGGTGTGGCATACTCTATACATGTAAGAGTTTGTCTGCACTTTGATTGATACGAAATCAGTTCATTAATTCTTTCATGGCTTCAGGGTTCTGTTTCTGTAACTGGTGTTTGATTCATAGTGTGCTTAATGACTTTAAAAACAACTACAAACCCATTCTTTTCGATCAAACTGGTGAAATTGTTTTGTTTACTATTGATGGAGGTAGAATTGGGAAATTAGATTAATTTTGGATAATTATTAGGTTAATTAATTTTACCCTCTTTGCCTTATAAATAGAAGGTTTTTATCATGTAATTCACAATCTTTTTATTATTATTAAAGAAAATTGGGTGTGTTTTTCTTTGAGAATTCTCCTTTTGTCCTTTTGGTTAATTTTACATGGTCAAGAGAGTCTTGTCAGTCCACG

Coding sequence (CDS)

ATGTTCTGGAAGGACCGTGATAGGGAGAGCAAAGAAATCAATGGAGCTCCTCTCTGTGGTCAGGTTCGAGTGCTTGTGGTTGGCGATTCAGGTGTGGGGAAAACTTCTCTCGTTCATCTAATTGTAAACGGTTCTTCCATTTCTTGCCCTTCTCAAACTATTGGCTGTACAGTTGGAGTTAAGCATATTACTTATGGAAATGCTGGTAGCTCTTCAAGTAGCATAACAGGTGATGCCGAGAGAGATTTCTTTGTTGAACTTTGGGATGTGTCAGGGCATGAGCGCTACAACGACTGTCGCTCTCTTTTCTATTCTCAAATTAATGGTGTCATTTTTGTTCATGATCTTTCACAGAGAAGAACAAAAGCAAGCCTACAGAAGTGGGCAGTTGATATTGCAACAGTTGGGACATTTTCAGCTCCCTTAGGATCTGGAGGTCCTGGTGGCCTTCCTGTGCCTTTTATTGTAATTGGTAACAAAGCGGATATTGTTGCTAATGAGGGTACTAGAGGAAGTAGTGGAAATCTAGTTGATGCTGCTCGCCAGTGGGTCGAGAAGCAGGGTCTGCTTCCCTTCAGTGAGGAAATTCCGTTAACTGAAAGTTTCCCTGGTGGTGGAGGACTTCTTGCTGCTGCTAAAGAGGCGAGATATGACAAGGAAGCTGTAACTAAATTCTTCCGCATGCTCATCCGGAGAAGATATTTCTCAGATAGTTTACCAGCAGCCAACACTTGGTCCATGTCTCCAGTTCCAAAATCGGTACAGCGTCTAGATGACGGTATCAGTGATGAGGACCAGTCCTACAGTCGTTCAAGTTTTACCAGCGAAACGTACAAATACAACGCACTTCCTTCGCTCCCGGCACAGCGCAATCTTACTCCTCCCCCAACGCTTTACCCGCAGCAGCCATTTTCGGCTTCTGAAAACTACAACCTTCCGAAATTTGCTCTCCCAGCATCCCAGGAGTTCAACAATTTTACCAGATCGAAGCGCTCGGATATTAACGTATGA

Protein sequence

MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRRTKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAARQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLPAANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYPQQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV

Homology

[Close]

BLAST of Sed0006410 vs. NCBI nr
Match: XP_023007041.1 (small GTPase LIP1-like [Cucurbita maxima])

HSP 1 Score: 635.2 bits (1637), Expect = 3.2e-178
Identity = 314/336 (93.45%), Postives = 322/336 (95.83%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDR++KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGV
Sbjct: 1   MFWKDRDRDNKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCSSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IATVGTFSAPLGSGGPGGLPVPFIVIGNKADI A EGTRGSSGNLVDAA
Sbjct: 121 TKSSLQKWAVEIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIAAKEGTRGSSGNLVDAA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLLPFSEEIPLTESFPGGGGL+AAAKEARYDKEAVTKFFRMLIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLIAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
            ANTWSMS VPKSVQRLDDGISDEDQSYSR+S T+ETYKYN LP LPAQRNLTPPPTLYP
Sbjct: 241 EANTWSMSSVPKSVQRLDDGISDEDQSYSRASLTNETYKYNTLPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFSASENYNLPKFAL ASQE NN TRSKRSDINV
Sbjct: 301 QQPFSASENYNLPKFALSASQEINNSTRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. NCBI nr
Match: XP_022947826.1 (small GTPase LIP1-like [Cucurbita moschata])

HSP 1 Score: 633.6 bits (1633), Expect = 9.4e-178
Identity = 313/336 (93.15%), Postives = 321/336 (95.54%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDR++KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGV
Sbjct: 1   MFWKDRDRDNKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCSSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IATVGTFSAPLGSGGPGGLPVPFIVIGNKADI A EGTRGSSGNLVDAA
Sbjct: 121 TKSSLQKWAVEIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIAAKEGTRGSSGNLVDAA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLLPFSEEIPLTESFPGGGGL+AAAKEARYDKEAVTKFFRMLIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLIAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
            ANTWSMS VPKSVQRLDDGISDEDQSYSR+S T+ETYKYN LP LPAQRNLTPPPTLYP
Sbjct: 241 EANTWSMSSVPKSVQRLDDGISDEDQSYSRASLTNETYKYNTLPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFSASENYNLPKFAL  SQE NN TRSKRSDINV
Sbjct: 301 QQPFSASENYNLPKFALSTSQEINNSTRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. NCBI nr
Match: KAG7035249.1 (Small GTPase LIP1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 633.3 bits (1632), Expect = 1.2e-177
Identity = 313/336 (93.15%), Postives = 322/336 (95.83%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDR++KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGV
Sbjct: 1   MFWKDRDRDNKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCSSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IATVGTFSAPLGSGGPGGLPVPFIVIGNKADI A EGTRGSSGNLVDAA
Sbjct: 121 TKSSLQKWAVEIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIAAKEGTRGSSGNLVDAA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLLPFSEEIPLTESFPGGGGL+AAAKEARYDKEAVTKFFRMLIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLIAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
            ANTWSMS VPKSVQRLDDGISDEDQSYSR+S T+ETYKYN LP LPAQRNLTPPPTLYP
Sbjct: 241 EANTWSMSSVPKSVQRLDDGISDEDQSYSRASLTNETYKYNTLPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFSASENYNLPKFAL ASQE N+ TRSKRSDINV
Sbjct: 301 QQPFSASENYNLPKFALSASQEINSSTRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. NCBI nr
Match: XP_023533303.1 (small GTPase LIP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177
Identity = 313/336 (93.15%), Postives = 322/336 (95.83%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDR++KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGV
Sbjct: 1   MFWKDRDRDNKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCSSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IATVGTFSAPLGSGGPGGLPVPFIVIGNKADI A EGTRGSSGNLVDAA
Sbjct: 121 TKSSLQKWAVEIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIAAKEGTRGSSGNLVDAA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLLPFSEEIPLTESFPGGGGL+AAAKEARYDKEAVTKFFRMLIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLIAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
            ANTWSMS VPKSVQRLDDGISDEDQSYSR+S T+ETYKYN LP LPAQRNLTPPPTLYP
Sbjct: 241 EANTWSMSSVPKSVQRLDDGISDEDQSYSRASLTNETYKYNTLPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFSASENYNLPKFAL ASQE N+ TRSKRSDINV
Sbjct: 301 QQPFSASENYNLPKFALSASQETNSSTRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. NCBI nr
Match: KAG6605289.1 (Small GTPase LIP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 631.3 bits (1627), Expect = 4.7e-177
Identity = 312/335 (93.13%), Postives = 321/335 (95.82%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDR++KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGV
Sbjct: 1   MFWKDRDRDNKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCSSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IATVGTFSAPLGSGGPGGLPVPFIVIGNKADI A EGTRGSSGNLVDAA
Sbjct: 121 TKSSLQKWAVEIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIAAKEGTRGSSGNLVDAA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLLPFSEEIPLTESFPGGGGL+AAAKEARYDKEAVTKFFRMLIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLIAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
            ANTWSMS VPKSVQRLDDGISDEDQSYSR+S T+ETYKYN LP LPAQRNLTPPPTLYP
Sbjct: 241 EANTWSMSSVPKSVQRLDDGISDEDQSYSRASLTNETYKYNTLPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDIN 336
           QQPFSASENYNLPKFAL ASQE N+ TRSKRSDIN
Sbjct: 301 QQPFSASENYNLPKFALSASQEINSSTRSKRSDIN 335

[Close]

BLAST of Sed0006410 vs. ExPASy Swiss-Prot
Match: Q9C5J9 (Small GTPase LIP1 OS=Arabidopsis thaliana OX=3702 GN=LIP1 PE=1 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 7.8e-143
Identity = 258/340 (75.88%), Postives = 286/340 (84.12%), Query Frame = 0


Query: 2   FWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVK 61
           FW++R+RE+KE   APLCGQVRVLVVGDSGVGKTSLVHLI  GSSI  P QTIGCTVGVK
Sbjct: 3   FWRERERENKEQILAPLCGQVRVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVK 62

Query: 62  HITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRRT 121
           HITYG+  SSSSSI GD+ERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRRT
Sbjct: 63  HITYGSPASSSSSIQGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRRT 122

Query: 122 KASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAAR 181
           K SLQKWA ++A  GTFSAPL SGGPGGLPVP+IV+GNKADI A EGT+GSSGNLVDAAR
Sbjct: 123 KTSLQKWASEVAATGTFSAPLPSGGPGGLPVPYIVVGNKADIAAKEGTKGSSGNLVDAAR 182

Query: 182 QWVEKQGLLP-FSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 241
            WVEKQGLLP  SE++PL ESFPG GGL+AAAKE RYDKEA+ KFFRMLIRRRYFSD LP
Sbjct: 183 HWVEKQGLLPSSSEDLPLFESFPGNGGLIAAAKETRYDKEALNKFFRMLIRRRYFSDELP 242

Query: 242 AANTWSMSPVP-KSVQRLDDGISDEDQSYSRSSFTSETYKY-NALPSLPAQRNLTPPPTL 301
           AA+ WS+SPVP  S QRLD+  SD+DQ Y R+SF  + YKY N +P LPAQRNLTPPPTL
Sbjct: 243 AASPWSISPVPTSSSQRLDEITSDDDQFYKRTSFHGDPYKYNNTIPPLPAQRNLTPPPTL 302

Query: 302 YPQQPFSASENYNLPKFALPASQEF--NNFTRSKRSDINV 337
           YPQQP S  +NY +P+++L + QE   N   RSKR DINV
Sbjct: 303 YPQQPVSTPDNYTIPRYSLSSVQETTNNGSARSKRMDINV 342

[Close]

BLAST of Sed0006410 vs. ExPASy Swiss-Prot
Match: F4KFD8 (Small GTPase-like protein LIP2 OS=Arabidopsis thaliana OX=3702 GN=LIP2 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 7.9e-127
Identity = 237/338 (70.12%), Postives = 268/338 (79.29%), Query Frame = 0


Query: 2   FWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVK 61
           FW++R RE+KE   APLCGQ+RVLVVGDSGVGK+SLVHLIV GSSI  PSQTIGCTVGVK
Sbjct: 3   FWRERGRENKEHMVAPLCGQIRVLVVGDSGVGKSSLVHLIVKGSSIVRPSQTIGCTVGVK 62

Query: 62  HITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRRT 121
           H+TY +  SSSS I GD+ERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQR T
Sbjct: 63  HLTYASPASSSSIIKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRTT 122

Query: 122 KASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAAR 181
           K +LQKWA +++  G FSAPL SGGPGGLPVP+IVIGNKADI A  GT GSSGNLVDAAR
Sbjct: 123 KTNLQKWAGEVSVTGEFSAPLSSGGPGGLPVPYIVIGNKADIAAKGGTNGSSGNLVDAAR 182

Query: 182 QWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLPA 241
            WVEKQGLLP S+E+PL+ESFP   GL+ AAKEARYDKEA+TK F MLIRRRYFSD LP+
Sbjct: 183 HWVEKQGLLPHSDELPLSESFPSNVGLIMAAKEARYDKEALTKIFHMLIRRRYFSDELPS 242

Query: 242 -ANTWSMSPVPKSVQRLDDGISDEDQSYSRSSF-TSETYKYNALPSLPAQRNLTPPPTLY 301
            ++ WS+S  P   QRLD+G SDEDQ Y R+S    + YKYN LP    Q NL   PTLY
Sbjct: 243 PSSAWSLSHAPS--QRLDEGTSDEDQFYKRTSLREGDAYKYNTLP----QHNLMQSPTLY 302

Query: 302 PQQPFSASENYNLPKFALPASQEFNNFT-RSKRSDINV 337
           PQQP     NY +P+F+L + +E +N   RSKR DINV
Sbjct: 303 PQQP-PDRYNYAIPRFSLSSVEETSNGNGRSKRMDINV 333

[Close]

BLAST of Sed0006410 vs. ExPASy Swiss-Prot
Match: Q5HYI8 (Rab-like protein 3 OS=Homo sapiens OX=9606 GN=RABL3 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.6e-18
Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = 0


Query: 21  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSITGDAE 80
           +V+VLV+GDSGVGK+SLVHL+     +  PS T+GC+V V+   Y              E
Sbjct: 6   RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--------E 65

Query: 81  RDFFVELWDVSGH----ERYNDCRSLFYSQINGVIFVHDLSQRRTKASLQKWAV-----D 140
           + +++ELWDV G           R++FY+ +NG+IFVHDL+ +++  +L++W++     D
Sbjct: 66  KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRD 125

Query: 141 IATVGTF--SAPLGSGGPGGLPVPFIVIGNKAD 163
           +   G    +            +P +VIG K D
Sbjct: 126 LVPTGVLVTNGDYDQEQFADNQIPLLVIGTKLD 150

[Close]

BLAST of Sed0006410 vs. ExPASy Swiss-Prot
Match: Q6TNS7 (Rab-like protein 3 OS=Danio rerio OX=7955 GN=rabl3 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.0e-17
Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 0


Query: 21  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSITGDAE 80
           +V+VLV+GDSGVGK+SLVHL+     +  PS T+GC+V V+   Y              E
Sbjct: 6   RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYREGTPE--------E 65

Query: 81  RDFFVELWDVSGH----ERYNDCRSLFYSQINGVIFVHDLSQRRTKASLQKWAVDIATVG 140
           + F++ELWDV G           R++FY+ +NG+I VHDL+ +++  +L +W+++   + 
Sbjct: 66  KAFYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLE--ALS 125

Query: 141 TFSAPLG---SGGP------GGLPVPFIVIGNKAD 163
             S+P G   S G           VP ++IG K D
Sbjct: 126 KDSSPTGIIVSNGDYDREQFAENAVPLLLIGTKFD 150

[Close]

BLAST of Sed0006410 vs. ExPASy Swiss-Prot
Match: Q9D4V7 (Rab-like protein 3 OS=Mus musculus OX=10090 GN=Rabl3 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.0e-17
Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 0


Query: 21  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSITGDAE 80
           +V+VLV+GDSGVGK+SLVHL+ +   +  PS T+GC+V ++   Y              E
Sbjct: 6   RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDYKEGTPE--------E 65

Query: 81  RDFFVELWDVSGH----ERYNDCRSLFYSQINGVIFVHDLSQRRTKASLQKWAVDIATVG 140
           + +++ELWDV G           R++FY+ +NG+I VHDL+ +++  +L +W++++  + 
Sbjct: 66  KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEV--LN 125

Query: 141 TFSAPLGSGGPGG---------LPVPFIVIGNKAD 163
             + P G     G           +P +VIG K D
Sbjct: 126 RDAVPTGVLVTNGDYDREQFADNQIPLLVIGTKLD 150

[Close]

BLAST of Sed0006410 vs. ExPASy TrEMBL
Match: A0A6J1KZF8 (small GTPase LIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111499650 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.6e-178
Identity = 314/336 (93.45%), Postives = 322/336 (95.83%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDR++KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGV
Sbjct: 1   MFWKDRDRDNKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCSSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IATVGTFSAPLGSGGPGGLPVPFIVIGNKADI A EGTRGSSGNLVDAA
Sbjct: 121 TKSSLQKWAVEIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIAAKEGTRGSSGNLVDAA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLLPFSEEIPLTESFPGGGGL+AAAKEARYDKEAVTKFFRMLIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLIAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
            ANTWSMS VPKSVQRLDDGISDEDQSYSR+S T+ETYKYN LP LPAQRNLTPPPTLYP
Sbjct: 241 EANTWSMSSVPKSVQRLDDGISDEDQSYSRASLTNETYKYNTLPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFSASENYNLPKFAL ASQE NN TRSKRSDINV
Sbjct: 301 QQPFSASENYNLPKFALSASQEINNSTRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. ExPASy TrEMBL
Match: A0A6J1G7J8 (small GTPase LIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451586 PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 4.6e-178
Identity = 313/336 (93.15%), Postives = 321/336 (95.54%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDR++KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGV
Sbjct: 1   MFWKDRDRDNKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCSSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IATVGTFSAPLGSGGPGGLPVPFIVIGNKADI A EGTRGSSGNLVDAA
Sbjct: 121 TKSSLQKWAVEIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIAAKEGTRGSSGNLVDAA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLLPFSEEIPLTESFPGGGGL+AAAKEARYDKEAVTKFFRMLIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLIAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
            ANTWSMS VPKSVQRLDDGISDEDQSYSR+S T+ETYKYN LP LPAQRNLTPPPTLYP
Sbjct: 241 EANTWSMSSVPKSVQRLDDGISDEDQSYSRASLTNETYKYNTLPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFSASENYNLPKFAL  SQE NN TRSKRSDINV
Sbjct: 301 QQPFSASENYNLPKFALSTSQEINNSTRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. ExPASy TrEMBL
Match: A0A5D3CQH6 (Putative GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002130 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 2.0e-173
Identity = 307/336 (91.37%), Postives = 317/336 (94.35%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDRE KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSIS PSQTIGCTVGV
Sbjct: 1   MFWKDRDREHKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISSPSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGH+RY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHDRYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IATVGTFSAPLGSGGPGGLPVP+IVIGNK DI A EGTRGSSGNLVD A
Sbjct: 121 TKSSLQKWAVEIATVGTFSAPLGSGGPGGLPVPYIVIGNKVDIAAKEGTRGSSGNLVDVA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLL FSEEIPLTESFPGGGGLLAAAKEARYDKEAVT FFR LIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLSFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTNFFRTLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
           AA TWS+SPVPKSVQRLDD ISDE+QSYSR SF+SETYKYNALP LPAQRNLTPPPTLYP
Sbjct: 241 AAITWSVSPVPKSVQRLDDAISDEEQSYSRPSFSSETYKYNALPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFSASENY+LPKFAL ASQE NN +RSKRSDINV
Sbjct: 301 QQPFSASENYSLPKFALSASQEMNNSSRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. ExPASy TrEMBL
Match: A0A0A0LMU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297160 PE=4 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.4e-173
Identity = 306/336 (91.07%), Postives = 317/336 (94.35%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDRE KE+NG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSSIS PSQTIGCTVGV
Sbjct: 1   MFWKDRDREHKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISSPSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGH+RY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHDRYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IAT+GTFSAPLGSGGPGGLPVP+IVIGNK DI A EGTRGSSGNLVD A
Sbjct: 121 TKSSLQKWAVEIATIGTFSAPLGSGGPGGLPVPYIVIGNKVDIAAKEGTRGSSGNLVDVA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLL FSEEIPLTESFPGGGGLLAAAKEARYDKEAVT FFR LIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLSFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTNFFRTLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
           AA TWS+SPVPKSVQRLDD ISDE+QSYSR SF+SETYKYNALP LPAQRNLTPPPTLYP
Sbjct: 241 AAITWSVSPVPKSVQRLDDTISDEEQSYSRPSFSSETYKYNALPPLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFSASENY+LPKFAL ASQE NN +RSKRSDINV
Sbjct: 301 QQPFSASENYSLPKFALSASQEINNSSRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. ExPASy TrEMBL
Match: A0A6J1DTZ0 (small GTPase LIP1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024381 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 9.8e-173
Identity = 302/336 (89.88%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1   MFWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGV 60
           MFWKDRDRE+KE+NGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSS SCPSQTIGCTVGV
Sbjct: 1   MFWKDRDRENKELNGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSTSCPSQTIGCTVGV 60

Query: 61  KHITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRR 120
           KHITYGNAGSSSSSI GDAERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRR
Sbjct: 61  KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120

Query: 121 TKASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAA 180
           TK+SLQKWAV+IAT+GTFSAPLGSGGPGGLPVP+IVIGNK DI A +G RGSSGNLVD A
Sbjct: 121 TKSSLQKWAVEIATIGTFSAPLGSGGPGGLPVPYIVIGNKVDIAAKDGARGSSGNLVDVA 180

Query: 181 RQWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 240
           RQWVEKQGLLPFSEEIPLTESFPG GGLLAAAKEARYDKEAVTKFFR LIRRRYFSDSLP
Sbjct: 181 RQWVEKQGLLPFSEEIPLTESFPGSGGLLAAAKEARYDKEAVTKFFRSLIRRRYFSDSLP 240

Query: 241 AANTWSMSPVPKSVQRLDDGISDEDQSYSRSSFTSETYKYNALPSLPAQRNLTPPPTLYP 300
           A NTWS+SPV  SVQRLD+G+SD+DQSYS  S  SETYKYN LPSLPAQRNLTPPPTLYP
Sbjct: 241 APNTWSISPVSNSVQRLDEGVSDDDQSYSHGSIISETYKYNVLPSLPAQRNLTPPPTLYP 300

Query: 301 QQPFSASENYNLPKFALPASQEFNNFTRSKRSDINV 337
           QQPFS SENY+LPKFAL ASQE NN TRSKRSDINV
Sbjct: 301 QQPFSVSENYSLPKFALSASQEMNNSTRSKRSDINV 336

[Close]

BLAST of Sed0006410 vs. TAIR 10
Match: AT5G64813.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 508.1 bits (1307), Expect = 5.6e-144
Identity = 258/340 (75.88%), Postives = 286/340 (84.12%), Query Frame = 0


Query: 2   FWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVK 61
           FW++R+RE+KE   APLCGQVRVLVVGDSGVGKTSLVHLI  GSSI  P QTIGCTVGVK
Sbjct: 3   FWRERERENKEQILAPLCGQVRVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVK 62

Query: 62  HITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRRT 121
           HITYG+  SSSSSI GD+ERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQRRT
Sbjct: 63  HITYGSPASSSSSIQGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRRT 122

Query: 122 KASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAAR 181
           K SLQKWA ++A  GTFSAPL SGGPGGLPVP+IV+GNKADI A EGT+GSSGNLVDAAR
Sbjct: 123 KTSLQKWASEVAATGTFSAPLPSGGPGGLPVPYIVVGNKADIAAKEGTKGSSGNLVDAAR 182

Query: 182 QWVEKQGLLP-FSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLP 241
            WVEKQGLLP  SE++PL ESFPG GGL+AAAKE RYDKEA+ KFFRMLIRRRYFSD LP
Sbjct: 183 HWVEKQGLLPSSSEDLPLFESFPGNGGLIAAAKETRYDKEALNKFFRMLIRRRYFSDELP 242

Query: 242 AANTWSMSPVP-KSVQRLDDGISDEDQSYSRSSFTSETYKY-NALPSLPAQRNLTPPPTL 301
           AA+ WS+SPVP  S QRLD+  SD+DQ Y R+SF  + YKY N +P LPAQRNLTPPPTL
Sbjct: 243 AASPWSISPVPTSSSQRLDEITSDDDQFYKRTSFHGDPYKYNNTIPPLPAQRNLTPPPTL 302

Query: 302 YPQQPFSASENYNLPKFALPASQEF--NNFTRSKRSDINV 337
           YPQQP S  +NY +P+++L + QE   N   RSKR DINV
Sbjct: 303 YPQQPVSTPDNYTIPRYSLSSVQETTNNGSARSKRMDINV 342

[Close]

BLAST of Sed0006410 vs. TAIR 10
Match: AT5G09910.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 454.9 bits (1169), Expect = 5.6e-128
Identity = 237/338 (70.12%), Postives = 268/338 (79.29%), Query Frame = 0


Query: 2   FWKDRDRESKEINGAPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVK 61
           FW++R RE+KE   APLCGQ+RVLVVGDSGVGK+SLVHLIV GSSI  PSQTIGCTVGVK
Sbjct: 3   FWRERGRENKEHMVAPLCGQIRVLVVGDSGVGKSSLVHLIVKGSSIVRPSQTIGCTVGVK 62

Query: 62  HITYGNAGSSSSSITGDAERDFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRRT 121
           H+TY +  SSSS I GD+ERDFFVELWDVSGHERY DCRSLFYSQINGVIFVHDLSQR T
Sbjct: 63  HLTYASPASSSSIIKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRTT 122

Query: 122 KASLQKWAVDIATVGTFSAPLGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAAR 181
           K +LQKWA +++  G FSAPL SGGPGGLPVP+IVIGNKADI A  GT GSSGNLVDAAR
Sbjct: 123 KTNLQKWAGEVSVTGEFSAPLSSGGPGGLPVPYIVIGNKADIAAKGGTNGSSGNLVDAAR 182

Query: 182 QWVEKQGLLPFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTKFFRMLIRRRYFSDSLPA 241
            WVEKQGLLP S+E+PL+ESFP   GL+ AAKEARYDKEA+TK F MLIRRRYFSD LP+
Sbjct: 183 HWVEKQGLLPHSDELPLSESFPSNVGLIMAAKEARYDKEALTKIFHMLIRRRYFSDELPS 242

Query: 242 -ANTWSMSPVPKSVQRLDDGISDEDQSYSRSSF-TSETYKYNALPSLPAQRNLTPPPTLY 301
            ++ WS+S  P   QRLD+G SDEDQ Y R+S    + YKYN LP    Q NL   PTLY
Sbjct: 243 PSSAWSLSHAPS--QRLDEGTSDEDQFYKRTSLREGDAYKYNTLP----QHNLMQSPTLY 302

Query: 302 PQQPFSASENYNLPKFALPASQEFNNFT-RSKRSDINV 337
           PQQP     NY +P+F+L + +E +N   RSKR DINV
Sbjct: 303 PQQP-PDRYNYAIPRFSLSSVEETSNGNGRSKRMDINV 333

[Close]

BLAST of Sed0006410 vs. TAIR 10
Match: AT1G49300.1 (RAB GTPase homolog G3E )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 49/175 (28.00%), Postives = 80/175 (45.71%), Query Frame = 0


Query: 22  VRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSITGDAER 81
           ++V+++GDSGVGKTSL++  VN    +    TIG     K + +              +R
Sbjct: 9   LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 68

Query: 82  DFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRRTKASLQKWAVDIATVGTFSAP 141
            F +++WD +G ER+      FY   +  + V+D++  ++   L  W  +     + S P
Sbjct: 69  LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDP 128

Query: 142 LGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVD--AARQWVEKQGLLPFSE 195
                      PF+VIGNK D+       G S  +V    AR W   +G +P+ E
Sbjct: 129 EN--------FPFVVIGNKIDV------DGGSSRVVSEKKARAWCASKGNIPYYE 156

[Close]

BLAST of Sed0006410 vs. TAIR 10
Match: AT1G49300.2 (RAB GTPase homolog G3E )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 49/175 (28.00%), Postives = 80/175 (45.71%), Query Frame = 0


Query: 22  VRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSITGDAER 81
           ++V+++GDSGVGKTSL++  VN    +    TIG     K + +              +R
Sbjct: 9   LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 68

Query: 82  DFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRRTKASLQKWAVDIATVGTFSAP 141
            F +++WD +G ER+      FY   +  + V+D++  ++   L  W  +     + S P
Sbjct: 69  LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDP 128

Query: 142 LGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVD--AARQWVEKQGLLPFSE 195
                      PF+VIGNK D+       G S  +V    AR W   +G +P+ E
Sbjct: 129 EN--------FPFVVIGNKIDV------DGGSSRVVSEKKARAWCASKGNIPYYE 156

[Close]

BLAST of Sed0006410 vs. TAIR 10
Match: AT3G18820.1 (RAB GTPase homolog G3F )

HSP 1 Score: 70.5 bits (171), Expect = 3.0e-12
Identity = 45/173 (26.01%), Postives = 78/173 (45.09%), Query Frame = 0


Query: 22  VRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSITGDAER 81
           ++V+++GDSGVGKTSL++  VN    +    TIG     K + +              +R
Sbjct: 9   LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 68

Query: 82  DFFVELWDVSGHERYNDCRSLFYSQINGVIFVHDLSQRRTKASLQKWAVDIATVGTFSAP 141
            F +++WD +G ER+      FY   +  + V+D++  ++  +L  W  +     + S P
Sbjct: 69  LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDP 128

Query: 142 LGSGGPGGLPVPFIVIGNKADIVANEGTRGSSGNLVDAARQWVEKQGLLPFSE 195
                      PF++IGNK D+        S       A+ W   +G +P+ E
Sbjct: 129 EN--------FPFVLIGNKVDVDDGNSRVVSE----KKAKAWCASKGNIPYFE 156

The following BLAST results are available for this feature:

BLAST of Sed0006410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023007041.1	3.2e-178	93.45	small GTPase LIP1-like [Cucurbita maxima]	[more]
XP_022947826.1	9.4e-178	93.15	small GTPase LIP1-like [Cucurbita moschata]	[more]
KAG7035249.1	1.2e-177	93.15	Small GTPase LIP1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023533303.1	2.1e-177	93.15	small GTPase LIP1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605289.1	4.7e-177	93.13	Small GTPase LIP1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0006410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5J9	7.8e-143	75.88	Small GTPase LIP1 OS=Arabidopsis thaliana OX=3702 GN=LIP1 PE=1 SV=1	[more]
F4KFD8	7.9e-127	70.12	Small GTPase-like protein LIP2 OS=Arabidopsis thaliana OX=3702 GN=LIP2 PE=3 SV=1	[more]
Q5HYI8	4.6e-18	33.99	Rab-like protein 3 OS=Homo sapiens OX=9606 GN=RABL3 PE=1 SV=1	[more]
Q6TNS7	1.0e-17	35.48	Rab-like protein 3 OS=Danio rerio OX=7955 GN=rabl3 PE=2 SV=1	[more]
Q9D4V7	1.0e-17	32.90	Rab-like protein 3 OS=Mus musculus OX=10090 GN=Rabl3 PE=1 SV=1	[more]

BLAST of Sed0006410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZF8	1.6e-178	93.45	small GTPase LIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111499650 PE=4 SV=1	[more]
A0A6J1G7J8	4.6e-178	93.15	small GTPase LIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451586 PE=4 SV=1	[more]
A0A5D3CQH6	2.0e-173	91.37	Putative GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LMU9	4.4e-173	91.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297160 PE=4 SV=1	[more]
A0A6J1DTZ0	9.8e-173	89.88	small GTPase LIP1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024381 PE=4...	[more]

BLAST of Sed0006410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64813.1	5.6e-144	75.88	Ras-related small GTP-binding family protein	[more]
AT5G09910.1	5.6e-128	70.12	Ras-related small GTP-binding family protein	[more]
AT1G49300.1	1.6e-13	28.00	RAB GTPase homolog G3E	[more]
AT1G49300.2	1.6e-13	28.00	RAB GTPase homolog G3E	[more]
AT3G18820.1	3.0e-12	26.01	RAB GTPase homolog G3F	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 76..98 score: 23.11 coord: 22..43 score: 38.66 coord: 150..163 score: 38.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 22..236 e-value: 3.3E-8 score: -7.3
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 7..331
None	No IPR available	PANTHER	PTHR24073:SF1142	SMALL GTPASE LIP1	coord: 7..331
None	No IPR available	PROSITE	PS51419	RAB	coord: 10..262 score: 12.810046
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 23..167 e-value: 1.4E-17 score: 63.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 20..199 e-value: 5.0E-29 score: 103.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 21..191
IPR025662	Sigma-54 interaction domain, ATP-binding site 1	PROSITE	PS00675	SIGMA54_INTERACT_1	coord: 24..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006410.1	Sed0006410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding