Homology
BLAST of Sed0006389 vs. NCBI nr
Match:
KAG7015576.1 (Poly(A)-specific ribonuclease PARN [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 593/713 (83.17%), Postives = 653/713 (91.58%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
MN RPLWA TR CFIRT YSSAA T PATA+NS FPLKNVTKSNF+AVLSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSCFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVAIDLEMTGITSAPWRES EFDRFDVRYLKVKDSAEKFAVVQFGVCPFRW+ AKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
F+AHPHNFFVFPRH I++DG SSEFLCQTTSIEFLAKYQF+FNACIHEGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RLNF + D+ S++SS+V NIRD+KRIGIADVLFKERMKNRLHEWRDRLLSER+ME
Sbjct: 181 ARKRLNFAHGDETSDASSNV-TNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE SN YQRQF+TIFFKMRPA +LSDFTSHQT+LIQLVIKKHF+DLCFV VDDGDANL
Sbjct: 241 QGQEGSNNYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVDSRDDKEL M+EVNSDRQ+AAE+KIQSAIGFRHVIDLLSSEKKLIIGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
IAHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKIL+NGN +LQQRMK+SSTSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGVLQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 480
LCPHIAFSSQSN +F+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+G
Sbjct: 421 LCPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVS 540
IDFV PSENL ++EKLQKH+NHLYLSW SGDIIDLSTG RMTE LR NRSKKHQAK+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKIS 540
Query: 541 FENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLK 600
FENIVLIWGFP NLNARKIKECI+KVFGL N+VSVYH+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 ENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 660
+NLERHDDPISVLHPL+ELF + +T AAGYEAY+E CSSP+ ++L ADQAEAVG+N+K
Sbjct: 601 KNLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTT 660
Query: 661 SIKLETIKSQMHEAVNIS-TVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
SIK E++KSQMHEA N S T D L++ T +QGME+G ND+ +T++++L+SSSM
Sbjct: 661 SIKPESVKSQMHEAANSSLTADMLNETTEVQGMEVGANDLRNTNYHILQSSSM 710
BLAST of Sed0006389 vs. NCBI nr
Match:
XP_022932379.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita moschata])
HSP 1 Score: 1191.4 bits (3081), Expect = 0.0e+00
Identity = 595/713 (83.45%), Postives = 652/713 (91.44%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
MN RPLWA TR CFIRT YSSAA T PATA+NS+FPLKNVTKSNF+AVLSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTTPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVAIDLEMTGITSAPWRES EFDRFDVRYLKVKDSAEKFAVVQFGVCPFRW+ AKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
F+AHPHNFFVFPRH I +DG SSEFLCQTTSIEFLAKYQF+FNACIHEGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEILVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RLNF + D+ S++SS+V NIRD+KRIGIADVLFKERMKNRLHEWRDRLLSER+ME
Sbjct: 181 ARKRLNFAHGDETSDASSNV-TNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE SN YQRQF+TIFFKMRPA +LSDFTSHQT+LIQLVIKKHF+DLCFV VDDGDANL
Sbjct: 241 QGQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVDSRDDKEL M+EVNSDRQ+AAE+KIQSAIGFRHVIDLLSSEKKLIIGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
IAHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKIL+NGN ILQQRMK+SSTSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 480
LCPHIAFSSQSN +F+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+G
Sbjct: 421 LCPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVS 540
IDFV PSENL ++EKLQKH+NHLYLSW SGDIIDLSTG RMTE LR NRSKKHQAK+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKIS 540
Query: 541 FENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLK 600
FENIVLIWGFP NLNARKIKECI+KVFGL N+VSVYH+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 ENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 660
+NLERHDDPISVLHPL+ELF + T AAGYEAY+E CSSP+ ++L ADQAEAVG+N+K
Sbjct: 601 KNLERHDDPISVLHPLTELFGAKGTNAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTT 660
Query: 661 SIKLETIKSQMHEAVNIS-TVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
SIK E++KSQMHEA N S T D L++ T +QGME+G ND+ +T++++LRSSSM
Sbjct: 661 SIKPESVKSQMHEAANNSLTADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of Sed0006389 vs. NCBI nr
Match:
KAG6577517.1 (Poly(A)-specific ribonuclease PARN, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1185.6 bits (3066), Expect = 0.0e+00
Identity = 590/713 (82.75%), Postives = 651/713 (91.30%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
MN RPLWA TR CFIRT YSSAA T PATA+NS FPLKNVTKSNF+AVLSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSCFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVAIDLEMTGITSAPWRES EFDRFDVRYLKVKDSAEKFAVVQFGVCPFRW+ AKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
F+AHPHNFFVFPRH I++DG SSEFLCQTTSIEFLAKYQF+FN CIHEGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNFCIHEGISYLSRAHEDA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RLNF + D+ S++SS+V NIRD+KRIGIADVLFKERMKNRLHEWRDRLLSER+ME
Sbjct: 181 ARKRLNFAHGDETSDASSNV-TNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE SN YQRQF+TIFFKMRPA +LSDFTSHQT+LIQLVIKKHF+DLCF+ VDDGDANL
Sbjct: 241 QGQEGSNNYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFIVVDDGDANL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVDSRDDKEL M+EVNSDRQ+AAE+KIQSAIGFRHVIDLLSSEKKLIIGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
IAHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKIL+NGN +LQQRMK+SSTSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGVLQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 480
LCPHIAFSSQSN +F+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+G
Sbjct: 421 LCPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVS 540
IDFV PSENL ++EKLQKH+NHLYLSW SGDIIDLSTG RMTE LR NRSKKHQAK+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKIS 540
Query: 541 FENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLK 600
FENIVLIWGFP NLNARKIKECI+KVFGL N+VSVYH+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 ENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 660
+ LERHDDPISVLHPL+ELF + +T AAGYEAY+E CSSP+ ++L ADQAEAVG+N+K
Sbjct: 601 KILERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTT 660
Query: 661 SIKLETIKSQMHEAVNIS-TVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
SIK E++KSQMHEA N S T D L++ T +QGME+G ND+ +T++++L+SSSM
Sbjct: 661 SIKPESVKSQMHEAANSSLTADMLNETTEVQGMEVGANDLRNTNYHILQSSSM 710
BLAST of Sed0006389 vs. NCBI nr
Match:
XP_023553318.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1180.2 bits (3052), Expect = 0.0e+00
Identity = 588/713 (82.47%), Postives = 650/713 (91.16%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
MN RPLWA TR CF RT YSSAA + PATA+NS+FPLKNVTKSNF+AVLSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFTRTATYSSAAVSSPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVAIDLEMTGITSAPWRES EFDRFDVRYLKVKDSAEKFAVVQFGVCPFRW+ AKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
F+AHPHNFFVFPRH I++DG SSEFLCQTTSIEFLAKYQF+FNACIHEGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RLNF + D+ ++SS+V NIRD KRIGIADVLFKERMKNRLHEWRDRLLSER+ME
Sbjct: 181 ARKRLNFAHGDETLDASSNV-TNIRDPKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE SN YQRQF+TIFFKMRPA +LSDFTSHQT+LIQLVIKKHF+DLCFV VDDGDANL
Sbjct: 241 QGQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVDSRDDKEL M+EVNSD+++AAE+KIQSAIGFRHVIDLLSSEKKLIIGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNSDQREAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
IAHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKIL+NGN ILQQRMK+SSTSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 480
LCPHIAFSSQSN +F+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+G
Sbjct: 421 LCPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVS 540
IDFV PSENL ++EKLQKH+NHLYLSW SGDIIDLSTG R TE LR NRSKKHQAK+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRTTEPLRSNRSKKHQAKIS 540
Query: 541 FENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLK 600
FENIVLIWGFP NLNARKIKECI+KVFGL N+VSVYH+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 ENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 660
+NLERHDDPISVLHPL+ELF + +T AAGYEAY+E CSSP+ ++L ADQAEAVG+N+K
Sbjct: 601 KNLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTT 660
Query: 661 SIKLETIKSQMHEAVNIS-TVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
SIK E++KSQMHEA N + T D L++ T +QGME+G ND+ +T++++LRSSSM
Sbjct: 661 SIKPESVKSQMHEAANNNLTADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of Sed0006389 vs. NCBI nr
Match:
XP_023007721.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita maxima])
HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 587/713 (82.33%), Postives = 647/713 (90.74%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
MN RPLWA TR CFIRT YSSAA T PATA+NS+FPLKNVTKSNF+AVLSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVAIDLEMTGITSAPWRES EFDRFDVRYLKVKDSAEKFAVVQFGVCPFRW+ AKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
F+AHPHNFFVFPRH I++DG SSEFLCQTTSIEFLAKYQF+FNACIHEGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RLNF + D+ ++SS+V NIR++KRIGIADVLFKERMKNRLHEWRDRLLSER+ME
Sbjct: 181 ARKRLNFAHGDETLDASSNV-TNIRNQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE +N YQRQF+TIFFKMRPA +LSDFTSHQT+LIQLVIKKHF+DLCFV VDDG+ANL
Sbjct: 241 QGQEGANDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGNANL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVDSRDDKEL M+EVN DRQ+AAE+KIQSAIGFRHVIDLLSSEKKLIIGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNCDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
IAHIH KFIGSLP TAEEFVSSIGK FP IMDTKIL+NGN ILQQRMK+SSTSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPLTAEEFVSSIGKRFPLIMDTKILLNGNGILQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 480
LCPHIAFSSQSN +FNSGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+G
Sbjct: 421 LCPHIAFSSQSNPAFNSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVS 540
IDFV PSENL ++EKLQKH+NHLYLSW SGDIIDLSTG RMTE LR NRSK+HQ K+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKRHQVKIS 540
Query: 541 FENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLK 600
FENIVLIWGFP NLNARKIKECI+KVFGL N+VSVYH+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 ENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 660
ENLERHDDPISVLHPL+ELF + +T AAGYEAY+E CSSP+ ++L ADQAEAVG+N+K
Sbjct: 601 ENLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTM 660
Query: 661 SIKLETIKSQMHEAVNIS-TVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
SIKL+++K QMHEA N S T D L + T +QGME+G ND+ +T++++LRSSSM
Sbjct: 661 SIKLKSVKGQMHEAANSSLTADMLKETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of Sed0006389 vs. ExPASy Swiss-Prot
Match:
Q9LG26 (Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 SV=2)
HSP 1 Score: 741.5 bits (1913), Expect = 8.9e-213
Identity = 370/634 (58.36%), Postives = 468/634 (73.82%), Query Frame = 0
Query: 28 TPPATAANSTFPLKNVTKSNFDAVLSELRTHVRASDFVAIDLEMTGITSAPWRESLEFDR 87
T A +A + FPLK+VT+SNF+ L++LR+ V+A+DFVAIDLEMTG+TSAPWR+SLEFDR
Sbjct: 26 TSTAASATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDR 85
Query: 88 FDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNSFIAHPHNFFVFPRHAIEIDGSSSEFLC 147
+DVRYLKVKDSAEKFAVVQFGVCPFRW+ SF+++PHNFFVFPR + D + EFLC
Sbjct: 86 YDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLC 145
Query: 148 QTTSIEFLAKYQFNFNACIHEGISYLSRAHEDAARSRLNFTYEDDRSESSSSVNNNIRDE 207
QTTS++FLAKYQF+FN CIHEGISYLSR E+ A RL + +D +SS +
Sbjct: 146 QTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGET----EEL 205
Query: 208 KRIGIADVLFKERMKNRLHEWRDRLLSERSMEFQGQESSNGYQRQFQTIFFKMRPAFSLS 267
K + +ADVLF RM+ L+EWR LL + + SNG + +T+F MRPA SL
Sbjct: 206 KLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLK 265
Query: 268 DFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANLQQLVVYVDSRDDKELFMKEVNSDRQQA 327
FTSHQ R++ V++KHF DL ++ +D ++ + +VVY DS DKE MKE +R++
Sbjct: 266 GFTSHQLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIVVYTDSDSDKENLMKEAKDERKRL 325
Query: 328 AEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHF 387
AE KIQSAIGFR VIDLL+SEKKLI+GHNCFLDIAH++SKF+G LPSTAE+FV+SI HF
Sbjct: 326 AERKIQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHF 385
Query: 388 PYIMDTKILINGNTILQQRMKRSSTSLSSAFGLLCPHIAFSSQSNTSF-NSGVQVEVQVD 447
PYI+DTKIL+N N +L QRMK+SSTSLSSAF LCP I FSS+S+ SF V ++V++D
Sbjct: 386 PYIVDTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEID 445
Query: 448 DLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLGIDFVSGSPSENLVEHEKLQKHVNHLY 507
++R SNWN+G KHEAGYDAFMTGC+FAQACN LG DF S ++ ++EKL+K++N LY
Sbjct: 446 NVRCSNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLY 505
Query: 508 LSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVSFENIVLIWGFPTNLNARKIKECIAKV 567
LSW GDIIDL TG ++ RV++ K +ENIVLIW FP L AR IKECI K
Sbjct: 506 LSWTRGDIIDLRTGHSNADNWRVSKFK-------YENIVLIWNFPRKLKARGIKECICKA 565
Query: 568 FGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLKENLERHDDPISVLHPLSELFESGNTQ 627
FG +V SVYH+D+SAVFV F E+V +FL LK LE D P+SVLHPLS++ E GNT
Sbjct: 566 FGSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTG 625
Query: 628 AAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 661
AA YEAY+E CSS +S ++ +DQAE VGV + +
Sbjct: 626 AADYEAYKEICSSHVSEVMFSDQAETVGVKSRTR 648
BLAST of Sed0006389 vs. ExPASy Swiss-Prot
Match:
Q8W4C3 (Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g25430 PE=2 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 3.8e-54
Identity = 172/616 (27.92%), Postives = 286/616 (46.43%), Query Frame = 0
Query: 31 ATAANS------TFPLKNVTKSNFDAVLSELRTHVRASDFVAIDLEMTGITSAPWRESLE 90
ATA N+ + +K V KSNF L E+RT + +SDF+A+ L+ TG +A W
Sbjct: 11 ATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSA 70
Query: 91 FDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNSFIAHPHNFFVFPRHAIEIDGSSSE 150
D YLK K +AE++ ++QF +CPF +K HP+NF +FPR ++ S
Sbjct: 71 IDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNFHLFPRDELKCGMPSYS 130
Query: 151 FLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDAARSRLNFTYEDDRSESSSSVNNNI 210
F CQ + + +A+ F+FN CI+EGISYLSRA E A++ F E+ S +V+++
Sbjct: 131 FSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASK----FLSENPILADSVTVSSS- 190
Query: 211 RDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEFQGQESSNGYQRQFQTIFFKMRPAF 270
+AD +F R+++R+ WR + S S+ + + + R
Sbjct: 191 ----PATVADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCL 250
Query: 271 SLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANLQQL-VVYVDSRDDKELFMKEVNS- 330
++ + Q +LI ++ + D+ + V Q + V++ S++DK+LF +E+
Sbjct: 251 TIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDL 310
Query: 331 DRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSS 390
++++ V+ GFR V+D +SS +K ++ N D IH+KF+G LPS ++F SS
Sbjct: 311 EKEENRRVR-----GFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSS 370
Query: 391 IGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGLLCPHIAFSSQSNTSFNSGVQVE 450
+ FP ++D L Q MK S LS+ ++ + S F + V VE
Sbjct: 371 LSSAFPNVVD----------LSQFMKEIS-PLSN-----ISNLPAAMSSLNRFFAPVDVE 430
Query: 451 VQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLGIDFVSGSPSENLVEHEKLQKHV 510
V H G +A M +FA+ C + D + +E+ + +H
Sbjct: 431 VANQGCPVKLDEGHQSH--GQNAVMISQLFAKLCTIQKSDLSTIQSNEDF-QALASDEHA 490
Query: 511 NHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVSFENIVLIWGFPTNLNARKIKEC 570
N +++ ++ V K+ +VS EN+V IWG + A K+K
Sbjct: 491 N------------SVTSCSKNAGDENVKVWSKNSRRVSSENLVFIWGLGKKMTAAKLKNV 550
Query: 571 IAKVFGLI-NVVSVYHLDESAVFVQFTKPEMVSEFLDLKENLERHDDPISVLHPLSELFE 630
+ K + V ++D S+ + F + FL N E+ D L E+
Sbjct: 551 LQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDG------SLREMVA 572
Query: 631 SGNTQAAGYEAYEETC 638
G + AGYE Y+ C
Sbjct: 611 EG-LRGAGYETYKRAC 572
BLAST of Sed0006389 vs. ExPASy Swiss-Prot
Match:
Q7ZU92 (Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2)
HSP 1 Score: 162.9 bits (411), Expect = 1.3e-38
Identity = 129/475 (27.16%), Postives = 214/475 (45.05%), Query Frame = 0
Query: 43 VTKSNFDAVLSELRTHVRASDFVAIDLEMTGITSAPWRESLE--FDRFDVRYLKVKDSAE 102
VT+ NF VL E+ V+ +DF++ID E TGI+ P +L D + RY K++ +
Sbjct: 3 VTRQNFKEVLPEVCNAVQEADFISIDGEFTGISDGPSVSALTNGLDTPEERYTKLRKHSM 62
Query: 103 KFAVVQFGVCPFRWNYAKNSFIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQF 162
F + QFGVC FR++ ++++I NF++FP+ +F+CQ++SI+FLA F
Sbjct: 63 NFLLFQFGVCTFRYDQNQSTYITKAFNFYIFPK-PFSRTSPDIKFICQSSSIDFLASQGF 122
Query: 163 NFNACIHEGISYLSRAHEDAARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKER 222
+FN GI YL++ E R + YE+ R + + + + G+ +V +R
Sbjct: 123 DFNKVFRSGIPYLNQEEECQLREQ----YEERRGQMNGAGPVSYTPPSGTGVCNVPEDQR 182
Query: 223 MKNRLHEWRDRLLSERSMEFQGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLV 282
R E + L + + + E G+QR+ + Q +
Sbjct: 183 EFIRSVEEKVEALLKNTDQTLDLEPCTGFQRKL----------------------IYQTL 242
Query: 283 IKKHFKDLCFVSVDDGDANLQQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRH 342
K+ K L V+ + ++ + + DD+E +E +QQ + ++ A+GF
Sbjct: 243 NSKYSKGL---HVEALETEKKERFIQISKVDDEERRRRE--QQKQQREQEELNDAVGFSR 302
Query: 343 VIDLLSSEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKIL---- 402
VI +S KL++GHN LD+ H +F G LP ++F FP ++DTK++
Sbjct: 303 VIRAISKSGKLVVGHNMLLDVMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDTKLMASTQ 362
Query: 403 ----INGNTILQQRMKRSSTSLSSAFGLLCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSN 462
I NT L + K+ CP + L+S +
Sbjct: 363 PFKEIIHNTSLAELHKQLRQKPFRPPTTECP----------------------EGLQSYD 422
Query: 463 WNSGDKHEAGYDAFMTGCVFAQACNLLGIDFVSGSPSENLVEHEKLQKHVNHLYL 508
++ HEAGYDAF+TG F N LG F++ S + L+ N L+L
Sbjct: 423 TSTEQLHEAGYDAFITGLCFISMANYLG-SFLTPPKSHISARSKLLEPFYNKLFL 422
BLAST of Sed0006389 vs. ExPASy Swiss-Prot
Match:
Q90ZA1 (Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 4.6e-36
Identity = 124/454 (27.31%), Postives = 203/454 (44.71%), Query Frame = 0
Query: 43 VTKSNFDAVLSELRTHVRASDFVAIDLEMTGITSAPWRESLE--FDRFDVRYLKVKDSAE 102
+T+SNF L ++ + +DF+AID E +GI+ P +L FD + RY K+K +
Sbjct: 3 ITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKHSM 62
Query: 103 KFAVVQFGVCPFRWNYAKNSFIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQF 162
+F + QFG+C F ++ + ++ NF++FP+ + +F+CQ++SI+FLA F
Sbjct: 63 EFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPK-PFNRNSPDKKFVCQSSSIDFLANQGF 122
Query: 163 NFNACIHEGISYLSRAHEDAARSRLNFTYEDDRSES------------SSSVNNNIRDEK 222
+FN GI YL++ E R + YED RS+S SS +I DE+
Sbjct: 123 DFNKVFRNGIPYLNQEEERVLRDQ----YEDRRSQSNGASTMSYISPNSSKTPVSIPDEQ 182
Query: 223 RIGIADVLFKERMKNRLHEWRDRLLSERSMEFQGQESSNGYQRQ--FQTIFFKMRPAFSL 282
+ I V+ ER+++ L ++SM E GYQR+ +QT+ +K
Sbjct: 183 KGFIDKVV--ERVEDFLKN------EQKSMNV---EPCTGYQRKLIYQTLNWKYPRG--- 242
Query: 283 SDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANLQQLVVYVDSRDDKELFMKEVNSDRQQ 342
+ V+ ++ ++ + + D++E K + +Q
Sbjct: 243 ------------------------IHVETVESEKKERYIVISKVDEEE--RKRMEQQKQA 302
Query: 343 AAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKH 402
++ A+GF +I +SS KL++GHN LD+ H +F LP EF
Sbjct: 303 KEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCV 362
Query: 403 FPYIMDTKILINGNTILQQRMKRSSTSLSSAFGLLCPHIAFSSQSNTSFNSGVQVEVQVD 462
FP ++DTK++ + N + S L F S +
Sbjct: 363 FPRVLDTKLMASTNPFKEIIYNTSLAELEKRL----KEAPFKPPKVDS----------AE 397
Query: 463 DLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 481
+S N S HEAGYDA++TG F N LG
Sbjct: 423 GFQSYNTASEQLHEAGYDAYITGLCFISMANYLG 397
BLAST of Sed0006389 vs. ExPASy Swiss-Prot
Match:
P69341 (Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2)
HSP 1 Score: 150.2 bits (378), Expect = 8.8e-35
Identity = 128/476 (26.89%), Postives = 214/476 (44.96%), Query Frame = 0
Query: 43 VTKSNFDAVLSELRTHVRASDFVAIDLEMTGITSAPWRESLE--FDRFDVRYLKVKDSAE 102
+ +SNF + L ++ + +DF AID E +GI+ P +L FD + RY K+K +
Sbjct: 3 IIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKHSM 62
Query: 103 KFAVVQFGVCPFRWNYAKNSFIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQF 162
F + QFG+C F+++Y + +I NF+VFP+ +F+CQ++SI+FLA F
Sbjct: 63 DFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK-PFNRSSPDVKFVCQSSSIDFLASQGF 122
Query: 163 NFNACIHEGISYLSRAHEDAARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKER 222
+FN GI YL++ E R + Y++ RS+S+ + + + ++
Sbjct: 123 DFNKVFRNGIPYLNQEEERQLREQ----YDEKRSQSNGAGALSYTSPNTSKCPVTIPDDQ 182
Query: 223 MKNRLHEWRDRLLSERSMEFQGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLI-QL 282
K + D+++ + Q +E+ N L T Q +LI Q
Sbjct: 183 KK-----FIDQVVEKIEDLLQSEENKN----------------LDLEPCTGFQRKLIYQT 242
Query: 283 VIKKHFKDLCFVSVDDGDANLQQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFR 342
+ K+ K + V+ + ++ + + D++E +E ++ E + A+GF
Sbjct: 243 LSWKYPKG---IHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEE--LNDAVGFS 302
Query: 343 HVIDLLSSEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKIL--- 402
VI +++ KL+IGHN LD+ H +F LP+ EF FP ++DTK++
Sbjct: 303 RVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVFPRLLDTKLMAST 362
Query: 403 -----INGNTILQQRMKRSSTSLSSAFGLLCPHIAFSSQSNTSFNSGVQVEVQVDDLRSS 462
I NT L + KR T FN +VE + S
Sbjct: 363 QPFKDIINNTSLAELEKR--------------------LKETPFNP-PKVE-SAEGFPSY 422
Query: 463 NWNSGDKHEAGYDAFMTGCVFAQACNLLGIDFVSGSPSENLVEHEKLQKHVNHLYL 508
+ S HEAGYDA++TG F N LG F+S S + ++ N L+L
Sbjct: 423 DTASEQLHEAGYDAYITGLCFISMANYLG-SFLSPPKSHVSARSKLIEPFFNKLFL 424
BLAST of Sed0006389 vs. ExPASy TrEMBL
Match:
A0A6J1EWU6 (poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438751 PE=3 SV=1)
HSP 1 Score: 1191.4 bits (3081), Expect = 0.0e+00
Identity = 595/713 (83.45%), Postives = 652/713 (91.44%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
MN RPLWA TR CFIRT YSSAA T PATA+NS+FPLKNVTKSNF+AVLSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTTPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVAIDLEMTGITSAPWRES EFDRFDVRYLKVKDSAEKFAVVQFGVCPFRW+ AKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
F+AHPHNFFVFPRH I +DG SSEFLCQTTSIEFLAKYQF+FNACIHEGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEILVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RLNF + D+ S++SS+V NIRD+KRIGIADVLFKERMKNRLHEWRDRLLSER+ME
Sbjct: 181 ARKRLNFAHGDETSDASSNV-TNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE SN YQRQF+TIFFKMRPA +LSDFTSHQT+LIQLVIKKHF+DLCFV VDDGDANL
Sbjct: 241 QGQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVDSRDDKEL M+EVNSDRQ+AAE+KIQSAIGFRHVIDLLSSEKKLIIGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
IAHIH KFIGSLPSTAEEFVSSIGKHFP+IMDTKIL+NGN ILQQRMK+SSTSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 480
LCPHIAFSSQSN +F+SGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+G
Sbjct: 421 LCPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVS 540
IDFV PSENL ++EKLQKH+NHLYLSW SGDIIDLSTG RMTE LR NRSKKHQAK+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKIS 540
Query: 541 FENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLK 600
FENIVLIWGFP NLNARKIKECI+KVFGL N+VSVYH+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 ENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 660
+NLERHDDPISVLHPL+ELF + T AAGYEAY+E CSSP+ ++L ADQAEAVG+N+K
Sbjct: 601 KNLERHDDPISVLHPLTELFGAKGTNAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTT 660
Query: 661 SIKLETIKSQMHEAVNIS-TVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
SIK E++KSQMHEA N S T D L++ T +QGME+G ND+ +T++++LRSSSM
Sbjct: 661 SIKPESVKSQMHEAANNSLTADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of Sed0006389 vs. ExPASy TrEMBL
Match:
A0A6J1L1G4 (poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111500250 PE=3 SV=1)
HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 587/713 (82.33%), Postives = 647/713 (90.74%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
MN RPLWA TR CFIRT YSSAA T PATA+NS+FPLKNVTKSNF+AVLSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVAIDLEMTGITSAPWRES EFDRFDVRYLKVKDSAEKFAVVQFGVCPFRW+ AKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
F+AHPHNFFVFPRH I++DG SSEFLCQTTSIEFLAKYQF+FNACIHEGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RLNF + D+ ++SS+V NIR++KRIGIADVLFKERMKNRLHEWRDRLLSER+ME
Sbjct: 181 ARKRLNFAHGDETLDASSNV-TNIRNQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE +N YQRQF+TIFFKMRPA +LSDFTSHQT+LIQLVIKKHF+DLCFV VDDG+ANL
Sbjct: 241 QGQEGANDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGNANL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVDSRDDKEL M+EVN DRQ+AAE+KIQSAIGFRHVIDLLSSEKKLIIGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNCDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
IAHIH KFIGSLP TAEEFVSSIGK FP IMDTKIL+NGN ILQQRMK+SSTSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPLTAEEFVSSIGKRFPLIMDTKILLNGNGILQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 480
LCPHIAFSSQSN +FNSGVQVEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+G
Sbjct: 421 LCPHIAFSSQSNPAFNSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVS 540
IDFV PSENL ++EKLQKH+NHLYLSW SGDIIDLSTG RMTE LR NRSK+HQ K+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKRHQVKIS 540
Query: 541 FENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLK 600
FENIVLIWGFP NLNARKIKECI+KVFGL N+VSVYH+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 ENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 660
ENLERHDDPISVLHPL+ELF + +T AAGYEAY+E CSSP+ ++L ADQAEAVG+N+K
Sbjct: 601 ENLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTM 660
Query: 661 SIKLETIKSQMHEAVNIS-TVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
SIKL+++K QMHEA N S T D L + T +QGME+G ND+ +T++++LRSSSM
Sbjct: 661 SIKLKSVKGQMHEAANSSLTADMLKETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of Sed0006389 vs. ExPASy TrEMBL
Match:
A0A6J1CSK6 (poly(A)-specific ribonuclease PARN isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013834 PE=3 SV=1)
HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 584/714 (81.79%), Postives = 633/714 (88.66%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
M TPRPLWAL R CFIRT YSSAA T PATA N +FPLKNVTKSNF+AV++ELR HVR
Sbjct: 1 MKTPRPLWALPRLLCFIRTATYSSAAVTAPATAVNPSFPLKNVTKSNFEAVVAELRNHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVAIDLEMTGITSAPWRES EFDRFDVRYLKVKDSAEKFAVVQFGVCPFRW+ KNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSTKNS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
FIAHPHNFFVFPR I++DG S EFLCQTTS+EFLAKYQF+FNACIHEGISYLSRA E A
Sbjct: 121 FIAHPHNFFVFPRQEIQVDGPSPEFLCQTTSVEFLAKYQFDFNACIHEGISYLSRAQEYA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RL+F Y D+ S++SS+V +I+DEKR+ I+DVLFKERMKNRLHEWRDRLLSER++EF
Sbjct: 181 ARKRLDFAYGDEMSDASSNV-TDIKDEKRVSISDVLFKERMKNRLHEWRDRLLSERNVEF 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE S YQR FQTIFFKMRPA L+DFTSHQTRLIQLVIKKHF DLC+V VD+G+ANL
Sbjct: 241 QGQECS--YQRPFQTIFFKMRPALCLNDFTSHQTRLIQLVIKKHFTDLCYVHVDNGNANL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVD RDDKEL MKEVNS+RQ+AAE+KIQSAIGFRHVIDLLS EKKLI+GHNCFLD
Sbjct: 301 QQLVVYVDYRDDKELLMKEVNSERQKAAEMKIQSAIGFRHVIDLLSLEKKLIVGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKIL+NGN+ILQQRMK+SSTSLSSA G+
Sbjct: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNSILQQRMKKSSTSLSSALGV 420
Query: 421 LCPHIAFSSQSNTS--FNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNL 480
LCPHIAFSS S +S FNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNL
Sbjct: 421 LCPHIAFSSHSKSSPAFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNL 480
Query: 481 LGIDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAK 540
+GIDFV SPSE L ++EK Q HVNHLYLSW SGDIIDLSTG R TESLR NRSKKHQAK
Sbjct: 481 IGIDFVRSSPSETLADNEKFQNHVNHLYLSWXSGDIIDLSTGNRRTESLRSNRSKKHQAK 540
Query: 541 VSFENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLD 600
+SFENIVLIWGFPTN+NARKIK+CI+KVFG NVVSVYHLDESAVFVQF K EMVSEFL
Sbjct: 541 ISFENIVLIWGFPTNINARKIKQCISKVFGPTNVVSVYHLDESAVFVQFAKLEMVSEFLM 600
Query: 601 LKENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRK 660
LKENLERH+DP+SVLHPL ELFE+ NT AA YEAY+E CSSPI +LL ADQAEAVG NRK
Sbjct: 601 LKENLERHNDPVSVLHPLYELFEARNTHAACYEAYKEICSSPICKLLFADQAEAVGFNRK 660
Query: 661 MKSIKLETIKSQMHEAVNISTVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
KSIK ET+KSQMHEA N T D LD NT IQ EIG NDIS T++NVL SSM
Sbjct: 661 TKSIKPETVKSQMHEAANGLTADMLDGNTEIQETEIGANDISCTNYNVLNLSSM 711
BLAST of Sed0006389 vs. ExPASy TrEMBL
Match:
A0A0A0L4V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G048430 PE=3 SV=1)
HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 538/713 (75.46%), Postives = 618/713 (86.68%), Query Frame = 0
Query: 1 MNTPRPLWALTRH-HCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHV 60
MN PLWAL R CFIRT YSSAA T P+TA+NS+FPLKNVTKSNF+A LSELR+HV
Sbjct: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
Query: 61 RASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKN 120
RA+DFVAIDLEMTGITSAPWR+ LEFDRFDVRYL VKDSAEKFAV+QFG+CPFRW+ AKN
Sbjct: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
Query: 121 SFIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHED 180
SF+AHPHNFF+FPRH IE+DG SSEFLCQTTS+EFLAKYQF+FNACI+EGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
Query: 181 AARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSME 240
AAR RLNF Y D+ ++SS+V N+ D+KR+GI DVLFKERMKNRLHEWRDRLLSER+ME
Sbjct: 181 AARKRLNFAYGDEMLDASSNV-TNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNME 240
Query: 241 FQGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDAN 300
FQGQE SN ++RQFQTIFFKMRPA +LSDFTSHQ +LIQLVIKKHF+DLCFV V+DG+A+
Sbjct: 241 FQGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNAD 300
Query: 301 LQQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFL 360
LQQLVV+VDSRDDKEL M+EVN D+++ E+KIQSAIGFRHVIDLLSSEKKLI+GHNCFL
Sbjct: 301 LQQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFL 360
Query: 361 DIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFG 420
D+ HIH KFIGSLPST EEFVSS+GKHFPYIMDTKIL+NGN IL +RM +S+TSLSSAFG
Sbjct: 361 DMLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFG 420
Query: 421 LLCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLL 480
LLCPHIAFSSQ +++NSGVQVEVQVDDLRSS WNSGD HEAGYDAFMTGCVFAQAC+L+
Sbjct: 421 LLCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLM 480
Query: 481 GIDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKV 540
GIDFV S SENL+ +E LQKH+N LYLSW GDIIDLSTG ++TES ++KH+AKV
Sbjct: 481 GIDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESF---TTRKHRAKV 540
Query: 541 SFENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDL 600
SF+NIVLIWGFPTNL ARKIK CI+K FG NV SV HLDESAVFVQFTKPEMVSEFLDL
Sbjct: 541 SFQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDL 600
Query: 601 KENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKM 660
KE LE+ DDP+SVLHPL+ELF+ T AAGYEAY++ CSSP+S+ L +DQAEAVG+NRK
Sbjct: 601 KEKLEKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKT 660
Query: 661 KSIKLETIKSQMHEAVNISTVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
SIK E +S+MH+AV + T IQG E+ ND+S+T+++ LRSSSM
Sbjct: 661 TSIKSEEKRSRMHQAV---------ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
BLAST of Sed0006389 vs. ExPASy TrEMBL
Match:
A0A5D3CQS8 (Poly(A)-specific ribonuclease PARN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00310 PE=3 SV=1)
HSP 1 Score: 1068.1 bits (2761), Expect = 1.5e-308
Identity = 537/712 (75.42%), Postives = 616/712 (86.52%), Query Frame = 0
Query: 1 MNTPRPLWALTRHHCFIRTVCYSSAAFTPPATAANSTFPLKNVTKSNFDAVLSELRTHVR 60
M+ PLWA R CFIRT YSSAA T PATA+NS+FPLKNVTKSNF+A LSELR+HVR
Sbjct: 1 MHPSHPLWA-RRLFCFIRTTNYSSAAVTAPATASNSSFPLKNVTKSNFEAALSELRSHVR 60
Query: 61 ASDFVAIDLEMTGITSAPWRESLEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNS 120
A+DFVA+DLEMTGITSAPWR+ LEFDRFDVRYL VKDSAEKFAVVQFGVCPFRW+ AK S
Sbjct: 61 AADFVAVDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVVQFGVCPFRWDSAKKS 120
Query: 121 FIAHPHNFFVFPRHAIEIDGSSSEFLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDA 180
F+AHPHNFF+FPRH IE+DG SSEFLC+TTS+EFLAKYQF+FNACI+EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFIFPRHEIEVDGPSSEFLCRTTSLEFLAKYQFDFNACIYEGISYLSRAHEDA 180
Query: 181 ARSRLNFTYEDDRSESSSSVNNNIRDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEF 240
AR RLNF Y D+ ++SS+V N+RD+KR+GIADVLF+ERMKNRLHEWRDRLLSER+MEF
Sbjct: 181 ARKRLNFAYGDEMLDASSNV-TNVRDKKRVGIADVLFRERMKNRLHEWRDRLLSERNMEF 240
Query: 241 QGQESSNGYQRQFQTIFFKMRPAFSLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANL 300
QGQE SN ++RQFQTIFFK RPA +LSDFTSHQ +LIQLVIKKHF+DLCFV V+DG+A+L
Sbjct: 241 QGQEGSNDHKRQFQTIFFKTRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
Query: 301 QQLVVYVDSRDDKELFMKEVNSDRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
QQLVVYVDSRDDKEL M+EVN D+ +AAE KIQSAIGFRHVIDLLSSEKKLI+GHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNRDQNKAAETKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
Query: 361 IAHIHSKFIGSLPSTAEEFVSSIGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGL 420
+ HIH KFIGSLPSTAEEFVSS GKHFPY+MDTKIL+N N IL++RM +S+TSLSSAFG
Sbjct: 361 MLHIHRKFIGSLPSTAEEFVSSFGKHFPYVMDTKILLNDNYILRRRMNKSNTSLSSAFGS 420
Query: 421 LCPHIAFSSQSNTSFNSGVQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLG 480
LCPHIAFSS + N GVQVEVQVDDLRSS WNSGDKHEAGYDAFMTGCVFAQACNL+G
Sbjct: 421 LCPHIAFSSLRVNALNDGVQVEVQVDDLRSSKWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVSGSPSENLVEHEKLQKHVNHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVS 540
IDFV S S+NLV++E LQKH+N LYL+W SGDIIDLSTG ++TES +++KH+ +VS
Sbjct: 481 IDFVDCSTSKNLVDNEILQKHINRLYLNWASGDIIDLSTGNQVTESF---KTRKHRVRVS 540
Query: 541 FENIVLIWGFPTNLNARKIKECIAKVFGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLK 600
FENIVLIWGF TNL ARKIK CI+KVFG NV SV HLDESAVFVQFTKPEMVSEFL+LK
Sbjct: 541 FENIVLIWGFSTNLTARKIKACISKVFGQANVSSVNHLDESAVFVQFTKPEMVSEFLNLK 600
Query: 601 ENLERHDDPISVLHPLSELFESGNTQAAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 660
E LE+ DDPISVLHPL+ELF++ T AAGYEAY++ CSSP+S+LL +DQAEAVG+NRK
Sbjct: 601 EKLEKRDDPISVLHPLTELFDARATHAAGYEAYKKICSSPMSKLLFSDQAEAVGINRKTM 660
Query: 661 SIKLETIKSQMHEAVNISTVDTLDKNTAIQGMEIGVNDISSTHFNVLRSSSM 713
IK E +S++ +A VD LD+ T IQG E N++SST++ LRSSSM
Sbjct: 661 LIKSEAKRSKIDQA-----VDMLDETTEIQGTEGEANNLSSTNYQSLRSSSM 702
BLAST of Sed0006389 vs. TAIR 10
Match:
AT1G55870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 741.5 bits (1913), Expect = 6.3e-214
Identity = 370/634 (58.36%), Postives = 468/634 (73.82%), Query Frame = 0
Query: 28 TPPATAANSTFPLKNVTKSNFDAVLSELRTHVRASDFVAIDLEMTGITSAPWRESLEFDR 87
T A +A + FPLK+VT+SNF+ L++LR+ V+A+DFVAIDLEMTG+TSAPWR+SLEFDR
Sbjct: 26 TSTAASATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDR 85
Query: 88 FDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNSFIAHPHNFFVFPRHAIEIDGSSSEFLC 147
+DVRYLKVKDSAEKFAVVQFGVCPFRW+ SF+++PHNFFVFPR + D + EFLC
Sbjct: 86 YDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLC 145
Query: 148 QTTSIEFLAKYQFNFNACIHEGISYLSRAHEDAARSRLNFTYEDDRSESSSSVNNNIRDE 207
QTTS++FLAKYQF+FN CIHEGISYLSR E+ A RL + +D +SS +
Sbjct: 146 QTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGET----EEL 205
Query: 208 KRIGIADVLFKERMKNRLHEWRDRLLSERSMEFQGQESSNGYQRQFQTIFFKMRPAFSLS 267
K + +ADVLF RM+ L+EWR LL + + SNG + +T+F MRPA SL
Sbjct: 206 KLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLK 265
Query: 268 DFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANLQQLVVYVDSRDDKELFMKEVNSDRQQA 327
FTSHQ R++ V++KHF DL ++ +D ++ + +VVY DS DKE MKE +R++
Sbjct: 266 GFTSHQLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIVVYTDSDSDKENLMKEAKDERKRL 325
Query: 328 AEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHF 387
AE KIQSAIGFR VIDLL+SEKKLI+GHNCFLDIAH++SKF+G LPSTAE+FV+SI HF
Sbjct: 326 AERKIQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHF 385
Query: 388 PYIMDTKILINGNTILQQRMKRSSTSLSSAFGLLCPHIAFSSQSNTSF-NSGVQVEVQVD 447
PYI+DTKIL+N N +L QRMK+SSTSLSSAF LCP I FSS+S+ SF V ++V++D
Sbjct: 386 PYIVDTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEID 445
Query: 448 DLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLGIDFVSGSPSENLVEHEKLQKHVNHLY 507
++R SNWN+G KHEAGYDAFMTGC+FAQACN LG DF S ++ ++EKL+K++N LY
Sbjct: 446 NVRCSNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLY 505
Query: 508 LSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVSFENIVLIWGFPTNLNARKIKECIAKV 567
LSW GDIIDL TG ++ RV++ K +ENIVLIW FP L AR IKECI K
Sbjct: 506 LSWTRGDIIDLRTGHSNADNWRVSKFK-------YENIVLIWNFPRKLKARGIKECICKA 565
Query: 568 FGLINVVSVYHLDESAVFVQFTKPEMVSEFLDLKENLERHDDPISVLHPLSELFESGNTQ 627
FG +V SVYH+D+SAVFV F E+V +FL LK LE D P+SVLHPLS++ E GNT
Sbjct: 566 FGSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTG 625
Query: 628 AAGYEAYEETCSSPISRLLLADQAEAVGVNRKMK 661
AA YEAY+E CSS +S ++ +DQAE VGV + +
Sbjct: 626 AADYEAYKEICSSHVSEVMFSDQAETVGVKSRTR 648
BLAST of Sed0006389 vs. TAIR 10
Match:
AT1G55870.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 557.4 bits (1435), Expect = 1.7e-158
Identity = 284/510 (55.69%), Postives = 363/510 (71.18%), Query Frame = 0
Query: 152 IEFLAKYQFNFNACIHEGISYLSRAHEDAARSRLNFTYEDDRSESSSSVNNNIRDEKRIG 211
++FLAKYQF+FN CIHEGISYLSR E+ A RL + +D +SS + K +
Sbjct: 1 MDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGET----EELKLVR 60
Query: 212 IADVLFKERMKNRLHEWRDRLLSERSMEFQGQESSNGYQRQFQTIFFKMRPAFSLSDFTS 271
+ADVLF RM+ L+EWR LL + + SNG + +T+F MRPA SL FTS
Sbjct: 61 LADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTS 120
Query: 272 HQTRLIQLVIKKHFKDLCFVSVDDGDANLQQLVVYVDSRDDKELFMKEVNSDRQQAAEVK 331
HQ R++ V++KHF DL ++ +D ++ + +VVY DS DKE MKE +R++ AE K
Sbjct: 121 HQLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIVVYTDSDSDKENLMKEAKDERKRLAERK 180
Query: 332 IQSAIGFRHVIDLLSSEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSSIGKHFPYIM 391
IQSAIGFR VIDLL+SEKKLI+GHNCFLDIAH++SKF+G LPSTAE+FV+SI HFPYI+
Sbjct: 181 IQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIV 240
Query: 392 DTKILINGNTILQQRMKRSSTSLSSAFGLLCPHIAFSSQSNTSF-NSGVQVEVQVDDLRS 451
DTKIL+N N +L QRMK+SSTSLSSAF LCP I FSS+S+ SF V ++V++D++R
Sbjct: 241 DTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRC 300
Query: 452 SNWNSGDKHEAGYDAFMTGCVFAQACNLLGIDFVSGSPSENLVEHEKLQKHVNHLYLSWV 511
SNWN+G KHEAGYDAFMTGC+FAQACN LG DF S ++ ++EKL+K++N LYLSW
Sbjct: 301 SNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWT 360
Query: 512 SGDIIDLSTGTRMTESLRVNRSKKHQAKVSFENIVLIWGFPTNLNARKIKECIAKVFGLI 571
GDIIDL TG ++ RV++ K +ENIVLIW FP L AR IKECI K FG
Sbjct: 361 RGDIIDLRTGHSNADNWRVSKFK-------YENIVLIWNFPRKLKARGIKECICKAFGSA 420
Query: 572 NVVSVYHLDESAVFVQFTKPEMVSEFLDLKENLERHDDPISVLHPLSELFESGNTQAAGY 631
+V SVYH+D+SAVFV F E+V +FL LK LE D P+SVLHPLS++ E GNT AA Y
Sbjct: 421 SVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADY 480
Query: 632 EAYEETCSSPISRLLLADQAEAVGVNRKMK 661
EAY+E CSS +S ++ +DQAE VGV + +
Sbjct: 481 EAYKEICSSHVSEVMFSDQAETVGVKSRTR 499
BLAST of Sed0006389 vs. TAIR 10
Match:
AT3G25430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 214.5 bits (545), Expect = 2.7e-55
Identity = 172/616 (27.92%), Postives = 286/616 (46.43%), Query Frame = 0
Query: 31 ATAANS------TFPLKNVTKSNFDAVLSELRTHVRASDFVAIDLEMTGITSAPWRESLE 90
ATA N+ + +K V KSNF L E+RT + +SDF+A+ L+ TG +A W
Sbjct: 11 ATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSA 70
Query: 91 FDRFDVRYLKVKDSAEKFAVVQFGVCPFRWNYAKNSFIAHPHNFFVFPRHAIEIDGSSSE 150
D YLK K +AE++ ++QF +CPF +K HP+NF +FPR ++ S
Sbjct: 71 IDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNFHLFPRDELKCGMPSYS 130
Query: 151 FLCQTTSIEFLAKYQFNFNACIHEGISYLSRAHEDAARSRLNFTYEDDRSESSSSVNNNI 210
F CQ + + +A+ F+FN CI+EGISYLSRA E A++ F E+ S +V+++
Sbjct: 131 FSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASK----FLSENPILADSVTVSSS- 190
Query: 211 RDEKRIGIADVLFKERMKNRLHEWRDRLLSERSMEFQGQESSNGYQRQFQTIFFKMRPAF 270
+AD +F R+++R+ WR + S S+ + + + R
Sbjct: 191 ----PATVADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCL 250
Query: 271 SLSDFTSHQTRLIQLVIKKHFKDLCFVSVDDGDANLQQL-VVYVDSRDDKELFMKEVNS- 330
++ + Q +LI ++ + D+ + V Q + V++ S++DK+LF +E+
Sbjct: 251 TIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDL 310
Query: 331 DRQQAAEVKIQSAIGFRHVIDLLSSEKKLIIGHNCFLDIAHIHSKFIGSLPSTAEEFVSS 390
++++ V+ GFR V+D +SS +K ++ N D IH+KF+G LPS ++F SS
Sbjct: 311 EKEENRRVR-----GFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSS 370
Query: 391 IGKHFPYIMDTKILINGNTILQQRMKRSSTSLSSAFGLLCPHIAFSSQSNTSFNSGVQVE 450
+ FP ++D L Q MK S LS+ ++ + S F + V VE
Sbjct: 371 LSSAFPNVVD----------LSQFMKEIS-PLSN-----ISNLPAAMSSLNRFFAPVDVE 430
Query: 451 VQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLLGIDFVSGSPSENLVEHEKLQKHV 510
V H G +A M +FA+ C + D + +E+ + +H
Sbjct: 431 VANQGCPVKLDEGHQSH--GQNAVMISQLFAKLCTIQKSDLSTIQSNEDF-QALASDEHA 490
Query: 511 NHLYLSWVSGDIIDLSTGTRMTESLRVNRSKKHQAKVSFENIVLIWGFPTNLNARKIKEC 570
N +++ ++ V K+ +VS EN+V IWG + A K+K
Sbjct: 491 N------------SVTSCSKNAGDENVKVWSKNSRRVSSENLVFIWGLGKKMTAAKLKNV 550
Query: 571 IAKVFGLI-NVVSVYHLDESAVFVQFTKPEMVSEFLDLKENLERHDDPISVLHPLSELFE 630
+ K + V ++D S+ + F + FL N E+ D L E+
Sbjct: 551 LQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDG------SLREMVA 572
Query: 631 SGNTQAAGYEAYEETC 638
G + AGYE Y+ C
Sbjct: 611 EG-LRGAGYETYKRAC 572
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7015576.1 | 0.0e+00 | 83.17 | Poly(A)-specific ribonuclease PARN [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_022932379.1 | 0.0e+00 | 83.45 | poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita moschata] | [more] |
| KAG6577517.1 | 0.0e+00 | 82.75 | Poly(A)-specific ribonuclease PARN, partial [Cucurbita argyrosperma subsp. soror... | [more] |
| XP_023553318.1 | 0.0e+00 | 82.47 | poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
| XP_023007721.1 | 0.0e+00 | 82.33 | poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9LG26 | 8.9e-213 | 58.36 | Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 ... | [more] |
| Q8W4C3 | 3.8e-54 | 27.92 | Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g2... | [more] |
| Q7ZU92 | 1.3e-38 | 27.16 | Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2 | [more] |
| Q90ZA1 | 4.6e-36 | 27.31 | Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1 | [more] |
| P69341 | 8.8e-35 | 26.89 | Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1EWU6 | 0.0e+00 | 83.45 | poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita moschata OX=3662 GN=L... | [more] |
| A0A6J1L1G4 | 0.0e+00 | 82.33 | poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... | [more] |
| A0A6J1CSK6 | 0.0e+00 | 81.79 | poly(A)-specific ribonuclease PARN isoform X1 OS=Momordica charantia OX=3673 GN=... | [more] |
| A0A0A0L4V6 | 0.0e+00 | 75.46 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G048430 PE=3 SV=1 | [more] |
| A0A5D3CQS8 | 1.5e-308 | 75.42 | Poly(A)-specific ribonuclease PARN OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G55870.1 | 6.3e-214 | 58.36 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
| AT1G55870.2 | 1.7e-158 | 55.69 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
| AT3G25430.1 | 2.7e-55 | 27.92 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
