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Sed0006360 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTAAATTCAACAAACAAACACCCCCGTGGTTTTTCCTGTTCGACTGCAAACTGAAGACGTTGGTCTGTGCCCCCCAGATCTCGTCGCAAGCTCCGCCCACCAGATCAGCGCCGGTCAGCACTCTCCGTCCTTCTCCGCCGCAATCCGTCGAGCGCCGCCGTTCAGTTCCTCGTGTGCGTTCGTCAGGCCAGACCCGTCGGGTCTGTTTCCGTAGCATCGGGTCCGACGCGCTACTCTTCAGATTCGCGCGTCTCCGACCAGCGAGCCGCATCCGTCGTTCGGTTCTTCCTTCAGCCGGTTTGGTTTGCGTCTTCGGGTAAGTTAGGTTTTCTGTTTAATGGCTATAAGATGTGATTGGCATGATGATAAATCATTTCTAATTGTGGATTTTGTTGCAAGAAGTACCCATTCTAATTTCGGTATCGAAATTTCTGTGTTTGGCGTGGTTGAAGTGGTAAATCCCAAGTTTGTAGATTCTTTTGAGGAATTTTAAGGACCTCCAAAGTTATGAATATTATTTGTGGATTTTAGATGCTATTTTAACTTGAAAAAAAATTATTGAATTGGAGTAGGACTCAAGAACTGGATTATAGTGTACTGATAATTTATTGGCCTTTTGATTCTGTGTAATTCGTAATTACATGGGAAAAGTAGGAAAGATAGAGTGTATGCTTTTGGATTAGATAATATTGGAGAATATCGGACCTCTTAAACATTTGATAAGTCTGCAAATTGTTCTTGTTCTACTCAATAACAATCTAAGAAGCACGGACACAGACACGACACGACACGAACATGTAGACAAGCCATTATTTAAAAATGTATGTTGAGGACACGAGATTTATTATTATTTTTTATAATATACTATTAAAAGATGAAATCCAAAATATTTGAGTTACTTATAAACTTACCCATAATAATCTCTAAATATTTTAGTTTTTATCTCATTTTCCTTCCCTTCATTTTATTTTCTCTCTTCCTTTCCTTTTTTCATTTTAGTCTGGCCTCCACCAACACTACCCATTGTCGTGTCATCCGTCATTGGAAACAAATAAGTCTTAATTGAGGTGACCATGAAGTGTCCGAAATTGAAAATAATAATAATAAAAGAGGACACGGAATTTTCAGTGTCGGACACGCCTAACGAGTGTCTGAAAGTATCAGTGTCGGACACGAGTATGACACAGATACGTTGTCAAAATAGAAGTGTTTGTGCTTCCTAGGTAACAATAGGATATGGATACCTTTTAGTGTGTAATCTTCTTCTATAAATAGCCTCTTTCCACTTTTTGTTTTTAAAGAGCTGGAGTTTTTTGTTGTGCTATCAGTATAAACTTCACTTATCTGCTTAATGTAATATTTGCACGTGGTCATTTAGACACCTTGTCGGATCATACCTATATTAGGGAGGGATCGATTTTATAATTTTGTTCTAATAAGAGAGGATTTTGAGGATCTAAGAGGTGATGAGATCAATTCATGGTGGTCATCTAACTAGGGAGTAATGGCCTACAAGTTTTCTTGACATAAAATATCATAGGATTAGACGATATGTCCTGTGATAATAGTAAGGTGCGCCGTGTGCATCAGCTGGCTTGGGAAAATAAAAGTTAGGGATGACCGTGGTTACCCTTGTTTCAAAAAATAAAATAAAATAAAAGTTGGTATACTTTCTGAAGTCTGATTTTCAAGTATACAGTGAAATAAGGCAACTGTTTTGTTTTTCGTGTCTTTCTCTCTTTTTTAGTTTTTGATATAGGTTAAAAGATACTGTTAAGGAAATAACTATTGATTATTGAACGATCTTACTGAAATAAGATTTGCTCTATTGGTTGTATAAACTGTCTCTTTTGAGTTCTAACTATTTGGTTGAGGAGCTTAAAGAAATCACAAAATGAATTTCTCTACCCTTGACGCCATCAATATCACTCTGTTGTCTTTATTAAAGACCATTCGTTTTGTCACTAGGCTTTCTACTGTCATCATCATAATTATTGTTTGATCATTTCTGAAACTCGGAGTAGCCACTTAAGCATAGCTTTCAAGCTTGAAAGGTTGCTGTAAATGAATCATGGACAAGAATGGCGACGAAGAAATGGTTTATCTTCCGCTACTAAGTTAGATATCACACTTCTTAGAGGATATGAATTTGATTACATTCATTAACATTAGTATTTTGCTCTCCTGTTCTTGTTCCCAATTTCTGTGGTTAAGGAAGATATTACACTGGAAGCCAGAAGGAAGGAAGGATTTATTTCAGTAGTGATGGAGTCAAGCTAAACATAGTAGATGCTTATAATATATAGTTGCTTCACAAAGCTAGTGTGACATGTTGAACACAACTCTTATGTGGGAAACACCGATACTTTTTATTAAGACCACCTTAGAAGAGATTACAAGACAAGTGTTTAGGACACACACTACAAAATTATACTAGAGCTCTTACAAAACACTTTGTAGTACTTTACAACACTTGCTTTTTCTTGGATACAAAATATGGTGGGGTGGAGGCCTATTTATAACATAGGCTAGACAATACACATTTTTCTAGAGTGTTCTTTAAAAAAATTATCTAGATATTTTCCCCCACATTTATCTAGAGACTTCTTAAGAATATCTAGATACTTACCACTTTCTAGAACATTCTTTCAATGTCCACGACACTCTAAAATTCTAAATACTTCTACACTTTGCTAAGAAGCTTCTAGATTATGGACTTCTACTCTAAGTGGGCTAATTAATATTTTTGATAATTTGGCCTCTCATAATTATTGGGTTAAACTCCATTAGGCTAGTGATGAACTTTTAACATGACAGTCATTTCATTTTTGCTTATGGCGTGAAAAAAGAGTATTCGTTTGAGTTACAAGGAATAGGAGAGACCGGAAGCTCTCATATTTTCTTTTAGCTACGTAGCTTAATTTTTGTGTAAACAAATAAAAGATTATATCAGTTGCAGATGGCATTTGGCGTTGATAATATTTTGATGATTCTGGACCACTTGGATCGAAAGGAATGACAGAATTTTTAAAAATAGGAGTTTGCCATACTTAGAGTCTCATGGAGAAATTGACACGGTGTCTTGGTGTAAACTCTCCCCCATGTTCCATGATTGTAGCTTTGATATTCTCCTTAATGGTTGGAAATCTTTTTTGTAATGGGCATTCCGCCCTTTTGTAATTTCATATCGTTAATGAAATTGTTTTTTATCTAAAAAAAAGGATAATATTTTGATAATTCATTTCAGGTGGAATGACATCCATGATGTGATGAAAGGTGCAATCACATCCAGTAGCTTACGTGCTGCTTTCTCACACTGCGTGCAGCAAGTGCGAAGCTATGACTACCATCACTACCTGTGCCTCCTTGAGCTTCCTCCTTCGATGAGGAAGGCTGCATTTGCACTCCGGGCGTTTAATGTTGAAACGTCGAAAGCCATGGATGTAGCTACCGATCCCAGAATAGGCCTTATGCGCCTTTTGTGGTGGCAGGAGGCTATTGATAAAATTTATGCTAGTAAAAAGATTGAACATCCCGTAGCACAAGCCCTTTCATCTGTGATATCTGAGAAAAAAATTAGCAAACTGTGGCTGAAAAGGTCAGTTGAAGCTCGGATTAACGATGCTAGAAGGGAGGACACCGACATTCCAGGAACCATTGATGAGCTAGAGAAATATGCTGAAGATACTGCGTCAACGCTACTCTATATGACTCTTCAAGCTGGTGGCATTATGTCCACAATAGCCGATCATGCAGCATCTCATATCGGTAAGGCGAGTGGGCTGCTTTTGTTGCTGAAGTCATTACCATTCCATGCTACTCGAAATCGCCATTTTTCTTACATTCCCGCGAAAGTGGCTGAAAATCACGGTTTGTTGGCGAAGCAGGGAGGGCATTTTGAGATACACTTGGACTCGAGAGAGAAGCTATGTGATGCAGTTTTTGAGATGGCTTCTGTAGCCAATGCTCATTTGCAAAAAGCTCGAAAATTGGCCGGGACGGTGCCGAGTGAGGCTCTGCCTGTGCTGTTGCAGGGCGTGCCTGCTCAAGTTCTGTTGGATTCTTTAAGAAAGGTACAGTTTGATGTGTTTGATCCAAGGTTACAGCGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTCCATCTGAGACTGAAGTGGTCTTCTTGGAGGGGGAAATATTGACAGCAGTTTTCTTTAATTTGGGGAAAGTTTTACTTTTTCCCCTGTATTTTGCTCGAGGACTTGATTTTAGTTTCATCAAATTAAATTATAAACTTAAAATAAGATGAAATGAGTATTTTGATTGGTTAATTTATTTTGTTTGTATCATTTGTGATTGATTAACTACGAGCATTTTTTGTTCTAATCGTGTTGGCACGTTTGTTATCTTCATTAGTGATAATTTATTTCGACTTCTGGTGA CGTAAATTCAACAAACAAACACCCCCGTGGTTTTTCCTGTTCGACTGCAAACTGAAGACGTTGGTCTGTGCCCCCCAGATCTCGTCGCAAGCTCCGCCCACCAGATCAGCGCCGGTCAGCACTCTCCGTCCTTCTCCGCCGCAATCCGTCGAGCGCCGCCGTTCAGTTCCTCGTGTGCGTTCGTCAGGCCAGACCCGTCGGGTCTGTTTCCGTAGCATCGGGTCCGACGCGCTACTCTTCAGATTCGCGCGTCTCCGACCAGCGAGCCGCATCCGTCGTTCGGTTCTTCCTTCAGCCGGTTTGGTTTGCGTCTTCGGGTGGAATGACATCCATGATGTGATGAAAGGTGCAATCACATCCAGTAGCTTACGTGCTGCTTTCTCACACTGCGTGCAGCAAGTGCGAAGCTATGACTACCATCACTACCTGTGCCTCCTTGAGCTTCCTCCTTCGATGAGGAAGGCTGCATTTGCACTCCGGGCGTTTAATGTTGAAACGTCGAAAGCCATGGATGTAGCTACCGATCCCAGAATAGGCCTTATGCGCCTTTTGTGGTGGCAGGAGGCTATTGATAAAATTTATGCTAGTAAAAAGATTGAACATCCCGTAGCACAAGCCCTTTCATCTGTGATATCTGAGAAAAAAATTAGCAAACTGTGGCTGAAAAGGTCAGTTGAAGCTCGGATTAACGATGCTAGAAGGGAGGACACCGACATTCCAGGAACCATTGATGAGCTAGAGAAATATGCTGAAGATACTGCGTCAACGCTACTCTATATGACTCTTCAAGCTGGTGGCATTATGTCCACAATAGCCGATCATGCAGCATCTCATATCGGTAAGGCGAGTGGGCTGCTTTTGTTGCTGAAGTCATTACCATTCCATGCTACTCGAAATCGCCATTTTTCTTACATTCCCGCGAAAGTGGCTGAAAATCACGGTTTGTTGGCGAAGCAGGGAGGGCATTTTGAGATACACTTGGACTCGAGAGAGAAGCTATGTGATGCAGTTTTTGAGATGGCTTCTGTAGCCAATGCTCATTTGCAAAAAGCTCGAAAATTGGCCGGGACGGTGCCGAGTGAGGCTCTGCCTGTGCTGTTGCAGGGCGTGCCTGCTCAAGTTCTGTTGGATTCTTTAAGAAAGGTACAGTTTGATGTGTTTGATCCAAGGTTACAGCGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTCCATCTGAGACTGAAGTGGTCTTCTTGGAGGGGGAAATATTGACAGCAGTTTTCTTTAATTTGGGGAAAGTTTTACTTTTTCCCCTGTATTTTGCTCGAGGACTTGATTTTAGTTTCATCAAATTAAATTATAAACTTAAAATAAGATGAAATGAGTATTTTGATTGGTTAATTTATTTTGTTTGTATCATTTGTGATTGATTAACTACGAGCATTTTTTGTTCTAATCGTGTTGGCACGTTTGTTATCTTCATTAGTGATAATTTATTTCGACTTCTGGTGA ATGAAAGGTGCAATCACATCCAGTAGCTTACGTGCTGCTTTCTCACACTGCGTGCAGCAAGTGCGAAGCTATGACTACCATCACTACCTGTGCCTCCTTGAGCTTCCTCCTTCGATGAGGAAGGCTGCATTTGCACTCCGGGCGTTTAATGTTGAAACGTCGAAAGCCATGGATGTAGCTACCGATCCCAGAATAGGCCTTATGCGCCTTTTGTGGTGGCAGGAGGCTATTGATAAAATTTATGCTAGTAAAAAGATTGAACATCCCGTAGCACAAGCCCTTTCATCTGTGATATCTGAGAAAAAAATTAGCAAACTGTGGCTGAAAAGGTCAGTTGAAGCTCGGATTAACGATGCTAGAAGGGAGGACACCGACATTCCAGGAACCATTGATGAGCTAGAGAAATATGCTGAAGATACTGCGTCAACGCTACTCTATATGACTCTTCAAGCTGGTGGCATTATGTCCACAATAGCCGATCATGCAGCATCTCATATCGGTAAGGCGAGTGGGCTGCTTTTGTTGCTGAAGTCATTACCATTCCATGCTACTCGAAATCGCCATTTTTCTTACATTCCCGCGAAAGTGGCTGAAAATCACGGTTTGTTGGCGAAGCAGGGAGGGCATTTTGAGATACACTTGGACTCGAGAGAGAAGCTATGTGATGCAGTTTTTGAGATGGCTTCTGTAGCCAATGCTCATTTGCAAAAAGCTCGAAAATTGGCCGGGACGGTGCCGAGTGAGGCTCTGCCTGTGCTGTTGCAGGGCGTGCCTGCTCAAGTTCTGTTGGATTCTTTAAGAAAGGTACAGTTTGATGTGTTTGATCCAAGGTTACAGCGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTCCATCTGAGACTGAAGTGGTCTTCTTGGAGGGGGAAATATTGA MKGAITSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSKAMDVATDPRIGLMRLLWWQEAIDKIYASKKIEHPVAQALSSVISEKKISKLWLKRSVEARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIMSTIADHAASHIGKASGLLLLLKSLPFHATRNRHFSYIPAKVAENHGLLAKQGGHFEIHLDSREKLCDAVFEMASVANAHLQKARKLAGTVPSEALPVLLQGVPAQVLLDSLRKVQFDVFDPRLQRGVLGVPPLWFHLRLKWSSWRGKY Homology
BLAST of Sed0006360 vs. NCBI nr
Match: XP_016900683.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Cucumis melo]) HSP 1 Score: 560.1 bits (1442), Expect = 1.2e-155 Identity = 280/303 (92.41%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of Sed0006360 vs. NCBI nr
Match: XP_008448893.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X2 [Cucumis melo] >XP_008448894.1 PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X2 [Cucumis melo]) HSP 1 Score: 560.1 bits (1442), Expect = 1.2e-155 Identity = 280/303 (92.41%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of Sed0006360 vs. NCBI nr
Match: TYK19487.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 557.4 bits (1435), Expect = 7.7e-155 Identity = 279/303 (92.08%), Postives = 285/303 (94.06%), Query Frame = 0
BLAST of Sed0006360 vs. NCBI nr
Match: XP_038876846.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Benincasa hispida]) HSP 1 Score: 557.0 bits (1434), Expect = 1.0e-154 Identity = 279/303 (92.08%), Postives = 284/303 (93.73%), Query Frame = 0
BLAST of Sed0006360 vs. NCBI nr
Match: XP_038876847.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X2 [Benincasa hispida]) HSP 1 Score: 557.0 bits (1434), Expect = 1.0e-154 Identity = 279/303 (92.08%), Postives = 284/303 (93.73%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy Swiss-Prot
Match: A7YVD7 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus OX=9913 GN=NDUFAF6 PE=2 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 7.2e-47 Identity = 108/288 (37.50%), Postives = 161/288 (55.90%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy Swiss-Prot
Match: A2AIL4 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus OX=10090 GN=Ndufaf6 PE=1 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.6e-46 Identity = 104/300 (34.67%), Postives = 170/300 (56.67%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy Swiss-Prot
Match: D3ZN43 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicus OX=10116 GN=Ndufaf6 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.8e-46 Identity = 104/288 (36.11%), Postives = 164/288 (56.94%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy Swiss-Prot
Match: Q330K2 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens OX=9606 GN=NDUFAF6 PE=1 SV=2) HSP 1 Score: 186.0 bits (471), Expect = 6.1e-46 Identity = 106/288 (36.81%), Postives = 160/288 (55.56%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy Swiss-Prot
Match: Q9VYS5 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophila melanogaster OX=7227 GN=sicily PE=1 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 3.9e-40 Identity = 102/263 (38.78%), Postives = 150/263 (57.03%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy TrEMBL
Match: A0A1S3BK62 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490921 PE=4 SV=1) HSP 1 Score: 560.1 bits (1442), Expect = 5.8e-156 Identity = 280/303 (92.41%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy TrEMBL
Match: A0A1S4DXI0 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490921 PE=4 SV=1) HSP 1 Score: 560.1 bits (1442), Expect = 5.8e-156 Identity = 280/303 (92.41%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy TrEMBL
Match: A0A5D3D7E5 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001420 PE=4 SV=1) HSP 1 Score: 557.4 bits (1435), Expect = 3.7e-155 Identity = 279/303 (92.08%), Postives = 285/303 (94.06%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy TrEMBL
Match: A0A6J1DFV8 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Momordica charantia OX=3673 GN=LOC111020431 PE=4 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 7.1e-154 Identity = 273/303 (90.10%), Postives = 283/303 (93.40%), Query Frame = 0
BLAST of Sed0006360 vs. ExPASy TrEMBL
Match: A0A0A0L2D9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035320 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153 Identity = 277/303 (91.42%), Postives = 283/303 (93.40%), Query Frame = 0
BLAST of Sed0006360 vs. TAIR 10
Match: AT1G62730.1 (Terpenoid synthases superfamily protein ) HSP 1 Score: 450.7 bits (1158), Expect = 9.5e-127 Identity = 230/299 (76.92%), Postives = 251/299 (83.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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