Sed0006317 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAAAGAAACACAATGATAAAATTGTCATTATACAAAAAAATAAAAGGATAAAAATAAGATCATTGATCATGAACAAAAATAAGGAAAAATCTTTTCCCATAAAATTAAATCATGAAAAGAGCTGCACTGTATTTTCCAGAGCCCGCTATAAATTTTGCCGTAACACTCTGCAAATGTCGTCCCCTACATTTTAGTTCTTAAAATTTCACACTCATGGATTTCACTCACTCTAAATCCTTCCTTTTCCCTCTCTTCGCCATTTTTGCCGTCGCCGCCGCCGCCGACATCTTCACGGCGGAGGAAACACTCGCCGCTCCTCCCCACCACTACGCCGCCGTGCCACCGGCTCAGCCGCCTGGCCACCACCACCATCACCACCACGCTCCGACTCCGGCACCGGTCGCCCCGCCGACCCACTTACCGGTTCACCCTCCGGTTCAACCGCCGGTCCACCACCACCACCATGTCCACGGCCAGCCGCCGGTTCACCCACCGGCAAATGCACCTTCCCACCACCTCCCGCCAGCTCACTCTCCGGCTCCCGGCCACCACCACCACCACCATGACGCCCGACCGTTGCCGCCGCCGGCTCACTCGCCGGCGCCGTTGTACCCGCCGAAGCCGCGGTTGCTGAGGAGCTTCATTTCGGTTCAAGGGGTTGTTTACTGCAAGTCGTGTAAGTATGCCGGAGTTGACACACTCGTCGGAGCTACTCCCGTCGCCGGTAAATTCTCAACTTCCTTTAATTTAAAGCTCTGGATTTAGCTTTTTTTCTTTTTCTTTTTCCTTTTCCTTTTAAACGCTTAACGGAGAATTCTTTTTAACTCTCTTTTGCTATCTTAAAAGAAAGGTAAAACTAAGATCAGTTTCAAACTGAACAATAGAAAGTTTGAACCTTTTTTATTTAGCTAAGGAAGGTTCAAATTCCATTATTTTCTTCTTTACAAAAAAAAAAATCATTATTTTTCATCTTTTTATTAGCCCTCTTTTTTTTTTTATTAATCACAAGATGACAACTTTGGAGCCCAATTTTACATGAAATGATTTTTTTTAGTTCAACAACCCTCATTAATTTGATTAGATGATCTAGAAGTAGTGGACACATAATTACACTGTTGTGTTATTCTGTTGCTTACAATTATTTAGTGCCTTTATGTCTGATTAAATATTAAAAATGAAATCATTATTTAGGGTTTACTATAGTTTAGTATCAAAATTTTCCACCCAATTACATTGTAGCTTGATGGCCAATTAGCTGAATTTTAATTTAGTTTAACATTGTTACTCTCAAGATCGAATTTTAATAAAAAAATTTCTAGTAAAAATGTTATAGACGAAAGTTTAAAAGCCAAATTAGTTGTAAAAAAATGTTTAAAAAATGAACACTATTTCTTACATTGGATAAAGTCGATATGATTAGTTGGATTTGGTTCGGGACAAATAATTGTAGGATGAGCTATTTTAATTGATTAGAATATAAATAATTGAGTTTATAATTATACCAATAGCTCATTGAATACAAATTTATATAAATAATTGTAAATAATAATTTGTTTGAATATAAATTTTTATAAAGTAATTGAAGTCATTAATGAGAGATTAAAAATAAATAGATAAAATTTTAAATTATTTTGAATCATTAAAAATGAATATTAATTTCAAGTGTTAACTCAAGGAGTAATTGTAAATAATAGCTTATCTAAATACAAAGCACAAACATTTCCAAGGATTTACGAAAATTCTATAAAAGTTGTAATGAATAATTGTTTGAAGCTAAAACTTCATCAAAATAAGGTTGGGTTAGAAGAAACCTTTCCATACATACCCTCTCTATCCAAACACAATTTTCAGACAGAAACTTTATAGTCTTTCAAAAAAAAAAAATGATGGCAGAAGGAAAGAGAATATTTTTTAAAAAAATTAAAAATACTAAGCCAAAACACAAGAGAAACAGTAGAAAGTATGGTACAAATTCACCAAAAAAGAAAAAAAGCTGCAAAATATTCAGTAAACATCACATGACATAACAGAGGGGTGTAAATGTAAATTGAAATGGGAAATCATTAATGACAGGCGCGAGCGTGAAGTTGATTTGCCAGAACACGAAAACCCCACTGGTCCAGACCGCAAGCACCGACAAGAACGGCTATTTCTTCATTTCCGCGCCGAAGGCCATAACCAGCTACGCCTTCCACAAGTGCAGGGTCCGGCTCGGCTCCTCCCCCTCCGCCGTCTGCTCCAAACCCTCCGCCCTCCACGGCGGCGCCGCCGGCGCCCCTCTCCGGCCCCAGAAGTCTTACATCGACGCCAACAAGCTCCCCTTTGTTCTCTACTCTGTCGGCCCTTTTGCCTTCGAACCCACTTGCCCTCATCGTCCTTAGTTTGTTTTTCCTAAAACGGTGTCGTTCTTGTTTGGACGTTTCTGCCTCTGTACGCCGGTTTGTGGTTGTTGTTGGGTTCGTCAGTTTGGAGTTGTCAGTGCAAAATAATGTTTTTGATTTAATGGTTAGGTTATTTTGTTATTTTTATATATAATTATTGTGTTTCTAGAGTAATTTAAGTCATATTTGGCATGATAAATCTACATACGTTTTTCTTTAATCAAAAATGAAAAAAAAGAATGTGGG AGAAAAAGAAACACAATGATAAAATTGTCATTATACAAAAAAATAAAAGGATAAAAATAAGATCATTGATCATGAACAAAAATAAGGAAAAATCTTTTCCCATAAAATTAAATCATGAAAAGAGCTGCACTGTATTTTCCAGAGCCCGCTATAAATTTTGCCGTAACACTCTGCAAATGTCGTCCCCTACATTTTAGTTCTTAAAATTTCACACTCATGGATTTCACTCACTCTAAATCCTTCCTTTTCCCTCTCTTCGCCATTTTTGCCGTCGCCGCCGCCGCCGACATCTTCACGGCGGAGGAAACACTCGCCGCTCCTCCCCACCACTACGCCGCCGTGCCACCGGCTCAGCCGCCTGGCCACCACCACCATCACCACCACGCTCCGACTCCGGCACCGGTCGCCCCGCCGACCCACTTACCGGTTCACCCTCCGGTTCAACCGCCGGTCCACCACCACCACCATGTCCACGGCCAGCCGCCGGTTCACCCACCGGCAAATGCACCTTCCCACCACCTCCCGCCAGCTCACTCTCCGGCTCCCGGCCACCACCACCACCACCATGACGCCCGACCGTTGCCGCCGCCGGCTCACTCGCCGGCGCCGTTGTACCCGCCGAAGCCGCGGTTGCTGAGGAGCTTCATTTCGGTTCAAGGGGTTGTTTACTGCAAGTCGTGTAAGTATGCCGGAGTTGACACACTCGTCGGAGCTACTCCCGTCGCCGGCGCGAGCGTGAAGTTGATTTGCCAGAACACGAAAACCCCACTGGTCCAGACCGCAAGCACCGACAAGAACGGCTATTTCTTCATTTCCGCGCCGAAGGCCATAACCAGCTACGCCTTCCACAAGTGCAGGGTCCGGCTCGGCTCCTCCCCCTCCGCCGTCTGCTCCAAACCCTCCGCCCTCCACGGCGGCGCCGCCGGCGCCCCTCTCCGGCCCCAGAAGTCTTACATCGACGCCAACAAGCTCCCCTTTGTTCTCTACTCTGTCGGCCCTTTTGCCTTCGAACCCACTTGCCCTCATCGTCCTTAGTTTGTTTTTCCTAAAACGGTGTCGTTCTTGTTTGGACGTTTCTGCCTCTGTACGCCGGTTTGTGGTTGTTGTTGGGTTCGTCAGTTTGGAGTTGTCAGTGCAAAATAATGTTTTTGATTTAATGGTTAGGTTATTTTGTTATTTTTATATATAATTATTGTGTTTCTAGAGTAATTTAAGTCATATTTGGCATGATAAATCTACATACGTTTTTCTTTAATCAAAAATGAAAAAAAAGAATGTGGG ATGGATTTCACTCACTCTAAATCCTTCCTTTTCCCTCTCTTCGCCATTTTTGCCGTCGCCGCCGCCGCCGACATCTTCACGGCGGAGGAAACACTCGCCGCTCCTCCCCACCACTACGCCGCCGTGCCACCGGCTCAGCCGCCTGGCCACCACCACCATCACCACCACGCTCCGACTCCGGCACCGGTCGCCCCGCCGACCCACTTACCGGTTCACCCTCCGGTTCAACCGCCGGTCCACCACCACCACCATGTCCACGGCCAGCCGCCGGTTCACCCACCGGCAAATGCACCTTCCCACCACCTCCCGCCAGCTCACTCTCCGGCTCCCGGCCACCACCACCACCACCATGACGCCCGACCGTTGCCGCCGCCGGCTCACTCGCCGGCGCCGTTGTACCCGCCGAAGCCGCGGTTGCTGAGGAGCTTCATTTCGGTTCAAGGGGTTGTTTACTGCAAGTCGTGTAAGTATGCCGGAGTTGACACACTCGTCGGAGCTACTCCCGTCGCCGGCGCGAGCGTGAAGTTGATTTGCCAGAACACGAAAACCCCACTGGTCCAGACCGCAAGCACCGACAAGAACGGCTATTTCTTCATTTCCGCGCCGAAGGCCATAACCAGCTACGCCTTCCACAAGTGCAGGGTCCGGCTCGGCTCCTCCCCCTCCGCCGTCTGCTCCAAACCCTCCGCCCTCCACGGCGGCGCCGCCGGCGCCCCTCTCCGGCCCCAGAAGTCTTACATCGACGCCAACAAGCTCCCCTTTGTTCTCTACTCTGTCGGCCCTTTTGCCTTCGAACCCACTTGCCCTCATCGTCCTTAG MDFTHSKSFLFPLFAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHHHHHHAPTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPPANAPSHHLPPAHSPAPGHHHHHHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSAVCSKPSALHGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPHRP Homology
BLAST of Sed0006317 vs. NCBI nr
Match: XP_038881349.1 (non-classical arabinogalactan protein 31-like [Benincasa hispida]) HSP 1 Score: 426.8 bits (1096), Expect = 1.4e-115 Identity = 224/279 (80.29%), Postives = 233/279 (83.51%), Query Frame = 0
BLAST of Sed0006317 vs. NCBI nr
Match: XP_022926437.1 (non-classical arabinogalactan protein 30-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 426.0 bits (1094), Expect = 2.4e-115 Identity = 228/275 (82.91%), Postives = 238/275 (86.55%), Query Frame = 0
BLAST of Sed0006317 vs. NCBI nr
Match: KAG6594600.1 (Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 424.1 bits (1089), Expect = 9.2e-115 Identity = 230/298 (77.18%), Postives = 240/298 (80.54%), Query Frame = 0
BLAST of Sed0006317 vs. NCBI nr
Match: XP_022926436.1 (non-classical arabinogalactan protein 30-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 422.9 bits (1086), Expect = 2.0e-114 Identity = 231/297 (77.78%), Postives = 240/297 (80.81%), Query Frame = 0
BLAST of Sed0006317 vs. NCBI nr
Match: XP_023003678.1 (non-classical arabinogalactan protein 31-like [Cucurbita maxima]) HSP 1 Score: 420.6 bits (1080), Expect = 1.0e-113 Identity = 227/307 (73.94%), Postives = 238/307 (77.52%), Query Frame = 0
BLAST of Sed0006317 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.0e-36 Identity = 108/245 (44.08%), Postives = 139/245 (56.73%), Query Frame = 0
BLAST of Sed0006317 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30 Identity = 96/230 (41.74%), Postives = 125/230 (54.35%), Query Frame = 0
BLAST of Sed0006317 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 8.6e-15 Identity = 96/263 (36.50%), Postives = 121/263 (46.01%), Query Frame = 0
BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1EEG4 (non-classical arabinogalactan protein 30-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433591 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 1.2e-115 Identity = 228/275 (82.91%), Postives = 238/275 (86.55%), Query Frame = 0
BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1EEX2 (non-classical arabinogalactan protein 30-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433591 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 9.9e-115 Identity = 231/297 (77.78%), Postives = 240/297 (80.81%), Query Frame = 0
BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1KXA6 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111497200 PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 4.9e-114 Identity = 227/307 (73.94%), Postives = 238/307 (77.52%), Query Frame = 0
BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1EEB1 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111433343 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 7.1e-113 Identity = 221/273 (80.95%), Postives = 236/273 (86.45%), Query Frame = 0
BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1IR37 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111478609 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.6e-109 Identity = 218/277 (78.70%), Postives = 231/277 (83.39%), Query Frame = 0
BLAST of Sed0006317 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 ) HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37 Identity = 108/245 (44.08%), Postives = 139/245 (56.73%), Query Frame = 0
BLAST of Sed0006317 vs. TAIR 10
Match: AT1G28290.2 (arabinogalactan protein 31 ) HSP 1 Score: 147.1 bits (370), Expect = 2.0e-35 Identity = 118/313 (37.70%), Postives = 155/313 (49.52%), Query Frame = 0
BLAST of Sed0006317 vs. TAIR 10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.2e-34 Identity = 72/147 (48.98%), Postives = 100/147 (68.03%), Query Frame = 0
BLAST of Sed0006317 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 ) HSP 1 Score: 132.9 bits (333), Expect = 3.9e-31 Identity = 96/230 (41.74%), Postives = 125/230 (54.35%), Query Frame = 0
BLAST of Sed0006317 vs. TAIR 10
Match: AT5G05500.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 75.5 bits (184), Expect = 7.5e-14 Identity = 50/159 (31.45%), Postives = 74/159 (46.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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