Sed0006199 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAAACACGTTCAAATCGGTGCCCAACCAACAATTCTGAAAAATCAAGCAAGAACAACGCCATTGATGAATTTGGGCAACAACAACAACAAACCCTAAACCCAATTTTCAATTCCAATTCGCAATCATGGCGAATCTAGACTTTGATTTCATTCCTTTCACGATTCATACTTATAAGTACCTGATTTTCTTCAACCCCATCAACGAAAAATGGCGAGAAAACACACCCGATTGCAGCGGATTAGGGTTTCTCAATCGCCGGCATGTTTTCAGGTCTGTTTCCGGCAGGTTCGAACCCGACCCACCTGCGATTCGGTGAAGAATTTTCAGAGGGAGGAGCTTTTAGGGCATGGGATCGATGAATCTGTGGCTAAGATTGGTAATAGAATCATGGTTGTGGTTGATTCTAGCTTTGAGGGCAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGAATCAGGATTTGATTATTCTTCTTCATGTTGCCAAGTCTTCAAAACCAGGTTAAAACCATGTTTGATGTGTGTTGATTAGGTTGTTTTTTGGTGGGAGTTGTTGTTTTCTGAAGGTGTTTGTGTTTTGCAGGTGAAGTGTTTGATGAAATGCTTGACATGAAGGCTTATGAACTTCTTTTGTCTATGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTAAGTTTCTGTTATACTTTCCATTTTCTTTGCCATGGGAATTTAGGGATGAAAGGAAGAGTTTTTGGTTGATAAAAGTGAATAGGACATAATCATAATTTAGTCTAAGAATTTTCTGTGAAGACAATGGATTCTTGGTATTTCTATAACATAAAAATATGATGTTGTCTCTGGCTTAATCTGTGCCATTTTTGGAGGCCGTTTATGTAATCATGTTGGGTTATTACTTACTATAACACAACCCATATTTGGCCCACCAATTATAATTACTGGTGGATTGGCCTATAACCCAAGCCTTTCCTATACAACTTTTTTGCAAGCCTTTGTTATACAACTTTTTGTGCAGTTCATATAACTCATATCCCTGTTTGAGAATCAACCATTTCTTCTTTTATGTCATAATAATAAAAATTGTTGTAATAAAGGATATTTGGGGATTTCGCTCCACTATAATCAAGGACACATGCACCCATCTTTAAGGCTCGAATCCAACAAATAATAAAGGATTTTACAATTAAGCTTACTCCAAGGTTTGAATATTTCAAAAATGCATGCACTGAAAATCTCAAGTTTCAACTAACGAGGCTGCCCCTCGGGACTATTATATCTATAACCTTAATTGTAATTACTTGCTTCCCAAATAACGTTTATTATAATCAAGCACCCCATTTTAATAACCTACTCCCCAATAGAAAAGTTCTCTTCTCCACTACTAGGTTCTAAACCATACAAATTTTTGTTTGCATCCCAAACATGGCTAATTGGGCTGATGGTTGGTTTCTACCATATGTACTGTTAACTCCCTCTGTTCTATCTGTGAATGGGTGCAAATTTGAAAATCTTGGCTCAGATGTCAGTTGAATGTGGATTAAGCAAATCGAGTTAATTATCGAAACATGACACTAGAAAAAAACCCAATTAGGATATTTTAAAACAAAAATAAAGTGGGATACGTTATTGATTAATTTCAGGTTCAAGTGGAGATGGAATTTCTACAAGGGAAGGAAATAGGTCGTGTAATTGTGGAAGAAGCAAAGAAACAGCGAGTGTCATTGCTGGTTCTTGGGCAAAAAAAGCAGTCTCCATTCTGGTCACTGGTAAAGAAGTTCAGTACAAACAAGAGAAAGAATCGTGGCGGGATCGTCGAGTACTGCATCCAAAACTCTTCGTGCCCGACCGTTGCGGCGAGAAGGAAGAGCAAGAAACTCGGAGGATATTTGATCACTACGAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGAGCCTGTGTTAGAATTTCTTTCTTTCAGCTGCCTTTGTTGTTTTTGCAGAGGAAAACAAGATTTAAATGGTGAGGCTTCTGATATTGTAAGTCTTATTGGGCCTCACTTTTTGCTTCTTTTATGATGATGAGTGGCTGTATTACTCAAAAGTAGAAAACCCACAAAAATACATATGAAAATGATGTAGAAATTTGTAAATGGATCTTCTGTTTCAACTTTCTTGTTGTTTTTTGATGCAA GTCAAACACGTTCAAATCGGTGCCCAACCAACAATTCTGAAAAATCAAGCAAGAACAACGCCATTGATGAATTTGGGCAACAACAACAACAAACCCTAAACCCAATTTTCAATTCCAATTCGCAATCATGGCGAATCTAGACTTTGATTTCATTCCTTTCACGATTCATACTTATAAGTACCTGATTTTCTTCAACCCCATCAACGAAAAATGGCGAGAAAACACACCCGATTGCAGCGGATTAGGGTTTCTCAATCGCCGGCATGTTTTCAGGTCTGTTTCCGGCAGGTTCGAACCCGACCCACCTGCGATTCGGTGAAGAATTTTCAGAGGGAGGAGCTTTTAGGGCATGGGATCGATGAATCTGTGGCTAAGATTGGTAATAGAATCATGGTTGTGGTTGATTCTAGCTTTGAGGGCAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGAATCAGGATTTGATTATTCTTCTTCATGTTGCCAAGTCTTCAAAACCAGGTGAAGTGTTTGATGAAATGCTTGACATGAAGGCTTATGAACTTCTTTTGTCTATGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTTCAAGTGGAGATGGAATTTCTACAAGGGAAGGAAATAGGTCGTGTAATTGTGGAAGAAGCAAAGAAACAGCGAGTGTCATTGCTGGTTCTTGGGCAAAAAAAGCAGTCTCCATTCTGGTCACTGGTAAAGAAGTTCAGTACAAACAAGAGAAAGAATCGTGGCGGGATCGTCGAGTACTGCATCCAAAACTCTTCGTGCCCGACCGTTGCGGCGAGAAGGAAGAGCAAGAAACTCGGAGGATATTTGATCACTACGAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGAGCCTGTGTTAGAATTTCTTTCTTTCAGCTGCCTTTGTTGTTTTTGCAGAGGAAAACAAGATTTAAATGGTGAGGCTTCTGATATTGTAAGTCTTATTGGGCCTCACTTTTTGCTTCTTTTATGATGATGAGTGGCTGTATTACTCAAAAGTAGAAAACCCACAAAAATACATATGAAAATGATGTAGAAATTTGTAAATGGATCTTCTGTTTCAACTTTCTTGTTGTTTTTTGATGCAA ATGGCGAGAAAACACACCCGATTGCAGCGGATTAGGGTTTCTCAATCGCCGGCATGTTTTCAGGTCTGTTTCCGGCAGGTTCGAACCCGACCCACCTGCGATTCGGTGAAGAATTTTCAGAGGGAGGAGCTTTTAGGGCATGGGATCGATGAATCTGTGGCTAAGATTGGTAATAGAATCATGGTTGTGGTTGATTCTAGCTTTGAGGGCAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGAATCAGGATTTGATTATTCTTCTTCATGTTGCCAAGTCTTCAAAACCAGGTGAAGTGTTTGATGAAATGCTTGACATGAAGGCTTATGAACTTCTTTTGTCTATGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTTCAAGTGGAGATGGAATTTCTACAAGGGAAGGAAATAGGTCGTGTAATTGTGGAAGAAGCAAAGAAACAGCGAGTGTCATTGCTGGTTCTTGGGCAAAAAAAGCAGTCTCCATTCTGGTCACTGGTAAAGAAGTTCAGTACAAACAAGAGAAAGAATCGTGGCGGGATCGTCGAGTACTGCATCCAAAACTCTTCGTGCCCGACCGTTGCGGCGAGAAGGAAGAGCAAGAAACTCGGAGGATATTTGATCACTACGAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGA MARKHTRLQRIRVSQSPACFQVCFRQVRTRPTCDSVKNFQREELLGHGIDESVAKIGNRIMVVVDSSFEGKGALEWALSHAVQNQDLIILLHVAKSSKPGEVFDEMLDMKAYELLLSMKNMCQMRRPGVQVEMEFLQGKEIGRVIVEEAKKQRVSLLVLGQKKQSPFWSLVKKFSTNKRKNRGGIVEYCIQNSSCPTVAARRKSKKLGGYLITTKSHKNFWLLA Homology
BLAST of Sed0006199 vs. NCBI nr
Match: XP_023531669.1 (uncharacterized protein LOC111793841 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 390.6 bits (1002), Expect = 9.2e-105 Identity = 196/231 (84.85%), Postives = 210/231 (90.91%), Query Frame = 0
BLAST of Sed0006199 vs. NCBI nr
Match: XP_022933390.1 (uncharacterized protein LOC111440820 [Cucurbita moschata] >KAG7021564.1 hypothetical protein SDJN02_15289, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 389.4 bits (999), Expect = 2.1e-104 Identity = 195/231 (84.42%), Postives = 210/231 (90.91%), Query Frame = 0
BLAST of Sed0006199 vs. NCBI nr
Match: XP_022966082.1 (uncharacterized protein LOC111465801 [Cucurbita maxima]) HSP 1 Score: 387.9 bits (995), Expect = 6.0e-104 Identity = 195/231 (84.42%), Postives = 210/231 (90.91%), Query Frame = 0
BLAST of Sed0006199 vs. NCBI nr
Match: XP_038880017.1 (uncharacterized protein LOC120071709 [Benincasa hispida]) HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103 Identity = 195/229 (85.15%), Postives = 210/229 (91.70%), Query Frame = 0
BLAST of Sed0006199 vs. NCBI nr
Match: XP_022135256.1 (universal stress protein PHOS32-like [Momordica charantia]) HSP 1 Score: 380.6 bits (976), Expect = 9.6e-102 Identity = 190/231 (82.25%), Postives = 207/231 (89.61%), Query Frame = 0
BLAST of Sed0006199 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 5.6e-04 Identity = 42/183 (22.95%), Postives = 78/183 (42.62%), Query Frame = 0
BLAST of Sed0006199 vs. ExPASy TrEMBL
Match: A0A6J1F4R8 (uncharacterized protein LOC111440820 OS=Cucurbita moschata OX=3662 GN=LOC111440820 PE=4 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104 Identity = 195/231 (84.42%), Postives = 210/231 (90.91%), Query Frame = 0
BLAST of Sed0006199 vs. ExPASy TrEMBL
Match: A0A6J1HM19 (uncharacterized protein LOC111465801 OS=Cucurbita maxima OX=3661 GN=LOC111465801 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.9e-104 Identity = 195/231 (84.42%), Postives = 210/231 (90.91%), Query Frame = 0
BLAST of Sed0006199 vs. ExPASy TrEMBL
Match: A0A6J1C057 (universal stress protein PHOS32-like OS=Momordica charantia OX=3673 GN=LOC111007264 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 4.6e-102 Identity = 190/231 (82.25%), Postives = 207/231 (89.61%), Query Frame = 0
BLAST of Sed0006199 vs. ExPASy TrEMBL
Match: A0A1S3BVX2 (uncharacterized protein LOC103494065 OS=Cucumis melo OX=3656 GN=LOC103494065 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101 Identity = 190/228 (83.33%), Postives = 208/228 (91.23%), Query Frame = 0
BLAST of Sed0006199 vs. ExPASy TrEMBL
Match: A0A6A1VV49 (Usp domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR4G015423 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.4e-58 Identity = 129/239 (53.97%), Postives = 170/239 (71.13%), Query Frame = 0
BLAST of Sed0006199 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 186.8 bits (473), Expect = 1.9e-47 Identity = 88/187 (47.06%), Postives = 131/187 (70.05%), Query Frame = 0
BLAST of Sed0006199 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46 Identity = 86/176 (48.86%), Postives = 131/176 (74.43%), Query Frame = 0
BLAST of Sed0006199 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 153.7 bits (387), Expect = 1.8e-37 Identity = 85/181 (46.96%), Postives = 117/181 (64.64%), Query Frame = 0
BLAST of Sed0006199 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36 Identity = 81/168 (48.21%), Postives = 117/168 (69.64%), Query Frame = 0
BLAST of Sed0006199 vs. TAIR 10
Match: AT1G69080.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 134.8 bits (338), Expect = 8.5e-32 Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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