Sed0006174 (gene) Chayote v1

Overview


Name	Sed0006174
Type	gene
Organism	Sechium edule (Chayote v1)
Description	survival of motor neuron-related-splicing factor 30
Location	Contig00303_ERROPOS193979: 105692 .. 112643 (+)
RNA-Seq Expression	Sed0006174
Synteny	Sed0006174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATTGGAAAGCACAATTTGATTGATTCACATCGAAAACTTTGTCGTGATTTTGAAATTTTTTTTTTTTAAAAAAAAAAAAAGAGAAGCGATTTATTTGCATGGTAAATTCAAATAATAAAAAGTTTTAGGTCAAAATACTCGTAAAGTTGATTTTGTTTGGAGCGACCCGGGGGTTTGATAGCCCGAAAGAGTTTTCATTGTTCATAATCGCAGCAGCGGCAGCGGTGGTGGAATTGTATTGTGTTGTGTTCTTCTTCTTCTTCTTGTTCTTCAGAATTGATCAGAATTGTACGAAAATGCAAGGAGCTGAAGATGTTAGCATTGAGGAGTTGGGTTCTAATCTCTCCACATACAAAGATCAGCTTCACCAGGTACCCACCTCCTTTCTTCCCCTATCAATTTCTTCTTTACTTGGGTTTCTTTACTCATATCTCAATTAGGGTTTTTCTCTTGCGCTGCACTGCACTAACTTGTACCCAAAATCTGTTATCTTTTAACCTACGAACGAACTGCTCACACCATAATCCTCATAAAATAGTACCCAATATTCCCTTTTACCGCTTTCCACTTTGTATGGGTGTTTTTATCTATTCTGTTTGGATTTATCTTTTTCCTGCATTTAAAGTCCTGAAATTTTCGACCAGGGTTTAAGCAACTGAATGATTTTAAAACTATTCATCATCAATTCTTGCCTTTCTTTTTTGAATCAAGCGTAACCACGCCCGTCCCTAGGCCAGGCATCGAAGGAGTAATGTCACAGGCAGTCTCGAACCTGAGACCTTGAATGGAGCATACCGCCCAAGTCTTAAACTAGTGTGCCACCCCTTGGGGACTTGAATTCTTGCTTCCTCACTTGTTTATTGTGTGTGTTTGGGTATCATAACTTGTTTCTATCATGATCCAGGTCAGACAGCTGTTAGATGTTGATCCTGGCAACTCTGAATACATAGACATGGAAAAGGAGCTTCAAGAGGTTTGTTTGTTCTACTCCTCCTCAGATGTGTATGGCTTATCATTCTTCATATTCCCGCTCAATGTATTTTATACAAGTTCCATCTTCTGCTGTAGCACTAAGGACCACAGAACGATCCTTACTATTATTTTTATTATGTGGGTTACCATCCCACTCTGCTTTGTTTCTTTTCTTTGTCTCCCTTCTTCATTCTGTCGTTCAAATAACTAAGTGTTATGGTCCATGTGGAGATTGCCATTTTCATTTTTGGGAACAAAAGGTGAGCCCGTTGTTTGTCTTCCATTTATGTGCTCCAGAGCTCTAATCTCTGGTGCATGAATGATGATTGTTGGATATGTCTCAAAATTTGAAACTTCATCAAGATGCACATCACTTCTACCTTGGTTCATTCCCTTGCAGGTGTGCTAATTTTCGTGATGGCCAGTCTGCTCTTCCCCCGACCCGACCTCCTTTCGGATGCTGATCCTGAGATTTAAGTTCTTGTGTTTTTCTTTTTCTTTTTTTGGATGGATACCTGCTATTTATGAAATTTACAGTTTAAGAGAATATTTTTAAAGCAACAGTGGGCTTGAGCTAAAGTTACAGTTATGCAGGTTATTGCTTTGACGGAAGAACTTCTTTCAACTACAAAGCCAAATGACATTTTAGGATCAAATGTAGAAACTGGTGATGACAGTGCATCCATTAGTTTCCAGCAGCCTAAAGGAGTTAATTTGGTAAGTTCTATCCTTGTTTTCTGTTGCCCATTTCATTTATTTGCTTGAAGCAACATGATGCCATAAATCTATGGTGGTGGGTTTCCTTGACATCCAAATATTGTAGAGTCATATTGTATGTCCCATGACAATAGTCGAGATACGTGTAAGTTGTCTTCGACAGTTACAGATATAAAAAAAAGTCATAAATAGTTATAGCTTTTGATTTAATTTACACTGCTTGGATATGTGTGATTGATTGTGTATGCTGGTAGTTGAATGTTATGTATATTTTATAAATTATTCTTCGTTAAAACTTCATTTATTGTCCATGAAAAGTGTTCTTATTGTGTATGTAAACATATATATAATTTTTTTGTGTTATTTTTATATAGTGCGCCTTAAGTAAAAAAAGCGCGCACCTTTTAGTGCGACTTGGCTTTTGAAAACACTGGTTATTGAGCTCTCACACTTTATTGACGAGCACATCTTGGCAATGGGATAAAGCCCTAGTCTGCAGGAAACTGCTCTGTAATGGGCTATTAATTATCCAGCAATCCTTCCAAAAGAATGCAGCATTTCCCAAACCAACCTTGTCTTGTATTCCATCATAAATCAATGGCCCATATTCCATAATGGTTTTCCAAGGGCCATTGGCAGAATTAATTCTCCTATTAAACAGATGATTGGAATGATGAAAGTTTTCTAAGGGCCCTCGGAGACATAACAATCTTTTTTAAATAATGCATATCTCCACTTCTCCTTAAGCTAAGTAGTATATACATGGTCATCAAAATTGTATGTTTCGTGTTTTATGCATTTTAAATTTTGTTTATAACCCCCAAGATGATGTTCTTGTATTCACATATTACTAACGAGAGCAATAGCTCAGTAGAACTAGTGTGTGCCCAATGACCAAAAGGTCATGGGCTTGAAATCCTCCTCCCCAATTGTTGTATAACTCATAAAGAAAAAGACTTCATATATTGGCTATCGAACAAAGAATGCAATGTCTGGTCTAGTATTTAGCATGTAGATTCATTTTTGTCAATTAGAGTAACCCCTTCACCCCTGTGTTGGTCTAGATCTATTGGTATTTCAGCATGTCTACATCCAAGATTTCCGTTTTCTCTAGCAAGTCTAGAGTGTGTACCCATTCCATTTCCACATACCAAAGGCTAACAGTGGTATCAGCGTGATGTGGATATTATAAGTTTGACTGCTTTTACATAGGCCAATCTTTCAGCCAATAGCCTTACGTTATCTTCTTTTTTATTGTCTCTGGAGTATAGATTCTTAATTCTCCTTACCTTTTTGTTTCGCTTCTTTTTTAAACATATTGCAAAAAAAACATTTTGAATGGTTTGATATGGAATCAGTACCACTCAAGAGTCTTCATAAATTGTTTGGCAGTGGAATTAACCTTCCTTTGAGTTGCATATCAATATTGTATTCCAATAATGTTTGGTGATCTAATATTCTATGCTTTTTATATGCAGGAGGAAGTTGGGAGCATATCTGATCATCATGAGAAATTTCCTATTGGATCAAAAGTTCAAGCTGTCTGGAGTGAGGATGGGGAGTGGTGAGTAAAAATTATGAGATTTTATTCACCAAATTATCTCTTTATAGTTAGAAATGAGACATTATTGAATAAAAAGTGTTCGTGAAAGTGATATGTGCTTAAAAGCTTACAAATCATTGGGAGTTGGGACACGTACTAGACAATATATAAAGACTTATTATTCAATGTTTCAAATTGACTGCCCCTGTAAATGCCAAGTTAATGAATGGTTTCTATCTGTTAGCATGTAGGATCATTTTTTCTTGAAGAGACTCCATCCATCCAAGAAACTGCCACATTTTCATAAAGTTGTTTTTACTAAATGGTTAATCAAAACCAGTTTGTTGTGCAATTACGGCAGCAGCTAAGCTACCTCAAATTTCCCAATCGTTGTGTTTCATTGCATCTTTGTAGGAAAAAGGGGTTAAAATTACACGTTAAATTCAGAGTTTGGTTAAATCAATTTAATAACACATCGACTATAGTTATTCCATTTTTGAAAATAATGAACCTCAACTCTTGTCTTCATCTCATCCCTCAGTTTTCAGCTCATTGTGTCTGTCCAGATAGGAGGCTTGGTCTTTAATTAGGGTTAATGCGTCTCTTTGGGCTTTGGTTGGTGAAGAGTTTTGTTACTATTCTTTTTTTGGAAGAAACTTTTCATTGATAAATGAAATTGTGTGGATAAACCTCGGGGACCATTACGCTAGTTATAAGTAAAATCTCCAATTTGAGATAAAGAAAGATAAACCAAAAACGTTAATAGGACAAATATTCTTTTTTTTTTGTGAAGAAACGATTTCATTGAAATTATGAAATGGGGAAGAATCCCAATGTCTCAGAGGCTTACAAGAATAATCTCCAATTTGAATAAAATAATAAAGAGAATAACTAGATAATGGTGTCTTATCCTTGCTCTGACCAATTGTGTTAATTGACTGACCAATCTTTACTTCTCACAGCCTCAACGTTCTTTGGCTCCTTTATTGAAACATTTCTTTTTGTTTCTATTTGTGTAACTATGGTTCCTTTGACTGTTGTTTTTAATAGAAACAAAACGCTTCTCTTGACTGTGTTCTATTATATAAATATTCAGGTACGATGCTACGGTTGAAGCTCATACTGTAAATGGTTTCTATGTTAGTTATGATGCTTGGGGGAACAAAGAAGAGGTAAGATTTTAATAGCTGCAGTTTGAGTCAGTATCTCAGTTCACTATTGTTCTCATGATCCTATTCCTTTGTTTCACTGACCCACCTTGTGTCAATTTATTTAATTTCCTTGCGTTAGAAAATTTCCCCTTTTATGCATTTATGTGAAATTATAAGCTATTTACCTAACCATCATGGAGTGGCTCAATTGGTCAAAGAGGGTCTTGGGGTGCTTAAGGTAATGGGTTCGGTCCATGGTGGCCACCTACCTAAGCATTAATTTTCTACGGGTTTCCTTGGCATCCAAATGTTGGAAGGTCAGGCGGAGTCAAGGTACGCGCAAGCTGGTCCAGACAGTCATGGATATAAAAAAAAAAGCTATTTACCTAGTTCAAACACATATATCTTTCTATTTTACCAGGATATATAATATACGTTGCAGACTTTGTTTTGTTTGAATTGAAAGTTAATTTGTTGGCCTTTCAACATAGTTTGCACCCTTTTCTTTTTTATATTATTTTAACGAGTATTCTAGTATTTCTTCAGAAAACTCAGGGTCTTATTTTCTCTTGGGACATTACTTTTTTAGACTAAAATCATATGCAAAAATCCTTGGAAGACCATGGTTGTTGGTTTTGGTTCCTTTTCCAAATGAGTCAAATCCTTGATTGTGTATGGTCTGATTGTTCACTTTTGGGAGGACCAATGGCTAATACGTCCCTTTTGTCTTCTTTTTCCATTTTGTTTTGTCTACATTTTTTGAGTGAGAACCTACTTTTCAACACACCTTTCGTTGGGTAAATTTAATTATACAAAAAAATTATAGCTTCTTCTTTAAAGAACACGACACACTTTTGCCTGGGGCTGTCTGCAGAAGGGGGAACTCTTTCTTGATGGGAACACAGAACACTGTTGGTGCATTCTTTCGGCTTGTGTGAAGGGAAAAACAACAAACTACTGTAAAATGAAATGAGAAGTAAAGAATCTCCTGGATTTTGGTGCTTTGGGTTGCAATTCTTTGGAACTCTTCTTGTTGTAACTTGCTTTCTACAACCCATTAAAATCAAACTTGCTAATAACCTATAACAAGAATCTAGGTAAATTAAACAGAATTTGTAGGTTATTAAACCCTAGATGGTGATTACCATGCCTTGAACTCGTTACCTTCTTAATCTTTATCATTCACATTGACCCCGTTGGACCACTGGGCCAGTGAGCAGTAAGGCAGTGTTTTCTTTTGTAAAGAAAGAACGCACACATATTGATAGATTATGGCAAGAGAAAACTGCAAGTACAAGGGGAGTTGAGATTCCGAGCAAGGGAGAACTATAAGCAAAAGAGAGAGCTTAATGAAGTTTAGGAGTTCGATGTATGTGTATGTATGTGTGTATATACATGTATATTCCTGTTAATTGTATTTGATTATTTCTTTGACCTATGTTGTCAGTAACAAGATCTGTACGTGTCAACACTTAATTCAATTGTATCTACTAACTTTAGGTGGACCCTGCAAATGTAAGACCAATCGAACTGGCAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCAACAAAGCAAGCTATCAAGCGCAAGATTGCTCAAGCTGGTGCTGTTGACTTCCAATCACGAAATTTACCATCAAAGCTTCGTATTGAACCTGAAGATCCGGAGGACGTGGTACGTAGTTGACAAGCAGCTATATTTCATGGCAACTAATTTATTAATATAGAAATTAGTTTGGTACAAGGCAGAGCCAGTAGTGCGTTTATTTGTGGTGTTGAAATTCATTTTTTATTTTAATAGAGAACCCCCTTCCCAAACTTGCTCTGATATAGCAATTTGTTTTGTATAGAAAGCAACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAATAAAAGACAAAACGCCTGGCAGCAGTTTCAGTCAGCAAAAGGCAAGTCAAAAAAGGTAAGTTTAGGTTGTTTTTCCTTATAGGAACCTTTGTGGTTGGTCTAAGTCTAACAATAACATGGTAAATATATACAATTTTCAGATCGGTTTCTTCTCCGGGCGGAAGAGAGAGAGCATTTTCAAGTCTCCGGATGATCCGAGTGGGAAGGTTGGAGTGACTGGAAGTGGCAAGGGGTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACAGGTGAGATGGATGATTAAAGGCATTTTGTTGGTAGGTGCTGTGCTGCTTTATTTGTATGATCATCATCTTCATTTGGGACTCTATCTGTACCAAAAAAGTTTAGGTTGGGGGGATGTTTCCCTCTCGTTAACACAGTTTTCTTACAAGGATCTTTTTTTTCCCTTTAAAGTTGCATGTTTAACTTTACTACTTTGGAAACTGAATTCCATCTTTTTCTTCCAATAGTCAAAATCCAAGTTGATTTTGGAACAAGAGATGACACATGTAGCTTTGGCGTAGCTTATGCGACCCCGAACAATGACATCATTTCTTACCTTCTAAGATTGTCATTGTGCCATCAATTCGTG

mRNA sequence

AATTAATTGGAAAGCACAATTTGATTGATTCACATCGAAAACTTTGTCGTGATTTTGAAATTTTTTTTTTTTAAAAAAAAAAAAAGAGAAGCGATTTATTTGCATGGTAAATTCAAATAATAAAAAGTTTTAGGTCAAAATACTCGTAAAGTTGATTTTGTTTGGAGCGACCCGGGGGTTTGATAGCCCGAAAGAGTTTTCATTGTTCATAATCGCAGCAGCGGCAGCGGTGGTGGAATTGTATTGTGTTGTGTTCTTCTTCTTCTTCTTGTTCTTCAGAATTGATCAGAATTGTACGAAAATGCAAGGAGCTGAAGATGTTAGCATTGAGGAGTTGGGTTCTAATCTCTCCACATACAAAGATCAGCTTCACCAGGTCAGACAGCTGTTAGATGTTGATCCTGGCAACTCTGAATACATAGACATGGAAAAGGAGCTTCAAGAGGTTATTGCTTTGACGGAAGAACTTCTTTCAACTACAAAGCCAAATGACATTTTAGGATCAAATGTAGAAACTGGTGATGACAGTGCATCCATTAGTTTCCAGCAGCCTAAAGGAGTTAATTTGGAGGAAGTTGGGAGCATATCTGATCATCATGAGAAATTTCCTATTGGATCAAAAGTTCAAGCTGTCTGGAGTGAGGATGGGGAGTGGTACGATGCTACGGTTGAAGCTCATACTGTAAATGGTTTCTATGTTAGTTATGATGCTTGGGGGAACAAAGAAGAGGTGGACCCTGCAAATGTAAGACCAATCGAACTGGCAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCAACAAAGCAAGCTATCAAGCGCAAGATTGCTCAAGCTGGTGCTGTTGACTTCCAATCACGAAATTTACCATCAAAGCTTCGTATTGAACCTGAAGATCCGGAGGACGTGAAAGCAACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAATAAAAGACAAAACGCCTGGCAGCAGTTTCAGTCAGCAAAAGGCAAGTCAAAAAAGATCGGTTTCTTCTCCGGGCGGAAGAGAGAGAGCATTTTCAAGTCTCCGGATGATCCGAGTGGGAAGGTTGGAGTGACTGGAAGTGGCAAGGGGTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACAGGTGAGATGGATGATTAAAGGCATTTTGTTGGTAGGTGCTGTGCTGCTTTATTTGTATGATCATCATCTTCATTTGGGACTCTATCTGTACCAAAAAAGTTTAGGTTGGGGGGATGTTTCCCTCTCGTTAACACAGTTTTCTTACAAGGATCTTTTTTTTCCCTTTAAAGTTGCATGTTTAACTTTACTACTTTGGAAACTGAATTCCATCTTTTTCTTCCAATAGTCAAAATCCAAGTTGATTTTGGAACAAGAGATGACACATGTAGCTTTGGCGTAGCTTATGCGACCCCGAACAATGACATCATTTCTTACCTTCTAAGATTGTCATTGTGCCATCAATTCGTG

Coding sequence (CDS)

ATGCAAGGAGCTGAAGATGTTAGCATTGAGGAGTTGGGTTCTAATCTCTCCACATACAAAGATCAGCTTCACCAGGTCAGACAGCTGTTAGATGTTGATCCTGGCAACTCTGAATACATAGACATGGAAAAGGAGCTTCAAGAGGTTATTGCTTTGACGGAAGAACTTCTTTCAACTACAAAGCCAAATGACATTTTAGGATCAAATGTAGAAACTGGTGATGACAGTGCATCCATTAGTTTCCAGCAGCCTAAAGGAGTTAATTTGGAGGAAGTTGGGAGCATATCTGATCATCATGAGAAATTTCCTATTGGATCAAAAGTTCAAGCTGTCTGGAGTGAGGATGGGGAGTGGTACGATGCTACGGTTGAAGCTCATACTGTAAATGGTTTCTATGTTAGTTATGATGCTTGGGGGAACAAAGAAGAGGTGGACCCTGCAAATGTAAGACCAATCGAACTGGCAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCAACAAAGCAAGCTATCAAGCGCAAGATTGCTCAAGCTGGTGCTGTTGACTTCCAATCACGAAATTTACCATCAAAGCTTCGTATTGAACCTGAAGATCCGGAGGACGTGAAAGCAACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAATAAAAGACAAAACGCCTGGCAGCAGTTTCAGTCAGCAAAAGGCAAGTCAAAAAAGATCGGTTTCTTCTCCGGGCGGAAGAGAGAGAGCATTTTCAAGTCTCCGGATGATCCGAGTGGGAAGGTTGGAGTGACTGGAAGTGGCAAGGGGTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACAGGTGAGATGGATGATTAA

Protein sequence

MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYDATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQAGAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD

Homology

[Close]

BLAST of Sed0006174 vs. NCBI nr
Match: XP_038876515.1 (survival of motor neuron-related-splicing factor 30 [Benincasa hispida])

HSP 1 Score: 523.1 bits (1346), Expect = 1.6e-144
Identity = 270/300 (90.00%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 1   MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTT 60
           MQG EDVSIEEL +NLSTYKDQL QVRQLLD DPGNSEYIDMEKEL+EVIALTEELLST 
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYD 120
           K N+I GSNVETGDDSASISF QPK  N  E GS+SD+HEKFPIGSKVQAVWSEDGEWYD
Sbjct: 61  KQNEIPGSNVETGDDSASISFHQPK-ENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEWYD 120

Query: 121 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 180
           AT+EAHTVNGFYVSYD WGNKEEVDPANVR I+L VNALLEAER+AEATKQAIKRKIAQA
Sbjct: 121 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRAIQLEVNALLEAERVAEATKQAIKRKIAQA 180

Query: 181 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240
            +VDFQSRNLPSKLRIEP+DPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS
Sbjct: 181 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240

Query: 241 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 300
           AKGKSKKIGFFSGRKRESIFKSPDDP+GKVGVTGSGKGLTEFQKREKHLHLKGAT EMD+
Sbjct: 241 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of Sed0006174 vs. NCBI nr
Match: XP_004142808.1 (survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus] >KGN51867.2 hypothetical protein Csa_008126 [Cucumis sativus])

HSP 1 Score: 519.2 bits (1336), Expect = 2.3e-143
Identity = 266/300 (88.67%), Postives = 281/300 (93.67%), Query Frame = 0


Query: 1   MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTT 60
           MQG EDVSIEEL +NLSTYKDQLHQVRQLLD DPGNSEYIDMEKEL+EVIALTEELLST 
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYD 120
           K N++ GSNVETGDDSASI FQQ K  N  E GS+SD+HEKFPIG+KVQAVWSEDGEWYD
Sbjct: 61  KQNEVSGSNVETGDDSASIGFQQSK-ENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYD 120

Query: 121 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 180
           AT+EAHTVNGFYVSYD WGNKEEVDPANVR I+L VN LLEAER+AEATKQAIKRKIAQA
Sbjct: 121 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNPLLEAERVAEATKQAIKRKIAQA 180

Query: 181 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240
            +VDFQSRNLPSKLRIEP+DPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQ+
Sbjct: 181 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQT 240

Query: 241 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 300
           AKGKSKKIGFFSGRKRESIFKSPDDP+GKVGVTGSGKGLTEFQKREKHLHLKGAT EMD+
Sbjct: 241 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of Sed0006174 vs. NCBI nr
Match: XP_022933076.1 (survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022998367.1 survival of motor neuron-related-splicing factor 30 [Cucurbita maxima] >XP_023530530.1 survival of motor neuron-related-splicing factor 30 [Cucurbita pepo subsp. pepo] >KAG6601669.1 Survival of motor neuron-related-splicing factor 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518.1 bits (1333), Expect = 5.1e-143
Identity = 266/300 (88.67%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 1   MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTT 60
           MQG EDVS+EEL +NLSTYKDQL QVR+LLD DPGNSEYIDMEKEL+EVIALTEELLST 
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYD 120
           K N+I GSNVETGDDSASISFQQ KG N  E  S+SD+HEKFPIG+KVQAVWSEDGEWYD
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKG-NKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYD 120

Query: 121 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 180
           AT+EAHTVNGFYVSYD WGNKEEVDPANVR I+L VNALLEAERMAEATKQAIKRKIAQA
Sbjct: 121 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQA 180

Query: 181 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240
            +VDFQSRNLPS+LRIEP+DPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS
Sbjct: 181 ASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240

Query: 241 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 300
           AKGKSKKIGFFSGRK+ESIFKSPDDP+GKVGVTGSGKGLTEFQKREKHLHLKGA+ EMDD
Sbjct: 241 AKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Sed0006174 vs. NCBI nr
Match: XP_022155149.1 (survival of motor neuron-related-splicing factor 30 [Momordica charantia])

HSP 1 Score: 513.5 bits (1321), Expect = 1.3e-141
Identity = 265/300 (88.33%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 1   MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTT 60
           MQG EDVSIEEL SNLSTYKDQL QVRQLLD DP NSEYIDMEKEL+EVI+LTEELL+T 
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYD 120
           K N+I GSNVETGD+SASISF Q K   + E  S+SDHHEKFPIGSKVQAVWSEDGEWYD
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKM-EAESLSDHHEKFPIGSKVQAVWSEDGEWYD 120

Query: 121 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 180
           AT+EAHTVNGFYVSYD+WGNKEEVDPANVR I+  VNALLEAERMAEATKQAIKRKIAQA
Sbjct: 121 ATIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQA 180

Query: 181 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240
            +VDFQSRNLP KLRIEP+DPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS
Sbjct: 181 ASVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240

Query: 241 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 300
           AKGKSKKIGFFSGRKRESIFKSPDDP+GKVGVTGSGKGLTEFQKREKHLHLKGAT EMDD
Sbjct: 241 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of Sed0006174 vs. NCBI nr
Match: KAG7032438.1 (Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 502.7 bits (1293), Expect = 2.2e-138
Identity = 265/324 (81.79%), Postives = 281/324 (86.73%), Query Frame = 0


Query: 1   MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQE------------ 60
           MQG EDVS+EEL +NLSTYKDQL QVR+LLD DPGNSEYIDMEKEL+E            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVVYFCPPRYILT 60

Query: 61  ------------VIALTEELLSTTKPNDILGSNVETGDDSASISFQQPKGVNLEEVGSIS 120
                       VIALTEELLST K N+I GSNVETGDDSASISFQQ KG N  E  S+ 
Sbjct: 61  ATWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKG-NKMEAESMC 120

Query: 121 DHHEKFPIGSKVQAVWSEDGEWYDATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAV 180
           D+HEKFPIG+KVQAVWSEDGEWYDAT+EAHTVNGFYVSYD WGNKEEVDPANVR I+L V
Sbjct: 121 DYHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEV 180

Query: 181 NALLEAERMAEATKQAIKRKIAQAGAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFK 240
           NALLEAERMAEATKQAIKRKIAQA +VDFQSRNLPS+LRIEP+DPEDVKATKRKKIHAFK
Sbjct: 181 NALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFK 240

Query: 241 SKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSG 300
           SKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDP+GKVGVTGSG
Sbjct: 241 SKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSG 300

[Close]

BLAST of Sed0006174 vs. ExPASy Swiss-Prot
Match: Q6DEY1 (Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=8364 GN=smndc1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.8e-19
Identity = 90/286 (31.47%), Postives = 138/286 (48.25%), Query Frame = 0


Query: 10  EELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKPNDILGSN 69
           E+L   L+ YK QL QV   L  +  N + + ++K+LQEVI LT++LLS ++P+      
Sbjct: 3   EDLAKQLAGYKAQLQQVESALTANGENEDLLKLKKDLQEVIELTKDLLS-SQPS------ 62

Query: 70  VETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYDATV-EAHTV 129
            ET DD+           ++   GS     + + +G K  AVWS+DG+WY+A + E    
Sbjct: 63  -ETADDACD---------DMSASGS-----QSWKVGEKCMAVWSDDGQWYEAEIEEIDEE 122

Query: 130 NG-FYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQAGAVDFQS 189
           NG   +++  +GN E     N+RP+E       E  +  E                   S
Sbjct: 123 NGTAAITFAGYGNAEVTSLLNLRPVE-------EGRKAKE------------------DS 182

Query: 190 RNLPSKLRIEPEDPEDVKATKR-KKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKS 249
            NLP   +      E + A +  KK  A K   RI++LE  +  ++  WQQF + A  K+
Sbjct: 183 GNLPMSKK------EMIAAQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNKAYSKN 230

Query: 250 KKIGFFSGRKRESIFKSPDDPSGKVGVTGSG---KGLTEFQKREKH 289
           KK     G+ + SIF SP+  +GKVGV   G   K +T++Q   K+
Sbjct: 243 KK-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Sed0006174 vs. ExPASy Swiss-Prot
Match: O75940 (Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=SMNDC1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.0e-18
Identity = 86/285 (30.18%), Postives = 136/285 (47.72%), Query Frame = 0


Query: 10  EELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKPNDILGSN 69
           E+L   L++YK QL QV   L  +  N + + ++K+LQEVI LT++LLS T+P++ L S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLS-TQPSETLAS- 62

Query: 70  VETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYDATV-EAHTV 129
                 S S +  QP                 + +G K  AVWSEDG+ Y+A + E    
Sbjct: 63  ------SDSFASTQPT--------------HSWKVGDKCMAVWSEDGQCYEAEIEEIDEE 122

Query: 130 NG-FYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQAGAVDFQS 189
           NG   +++  +GN E     N++P+E    A  ++     + K+ I ++           
Sbjct: 123 NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ----------- 182

Query: 190 RNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSK 249
                            +  K+KK  A K   RI++LE  +  ++  WQQF + A  K+K
Sbjct: 183 -----------------REYKKKK--ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK 230

Query: 250 KIGFFSGRKRESIFKSPDDPSGKVGVTGSG---KGLTEFQKREKH 289
           K     G+ + SIF SP+  +GKVGV   G   K +T++Q   K+
Sbjct: 243 K-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Sed0006174 vs. ExPASy Swiss-Prot
Match: Q8BGT7 (Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=Smndc1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.0e-18
Identity = 86/285 (30.18%), Postives = 136/285 (47.72%), Query Frame = 0


Query: 10  EELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKPNDILGSN 69
           E+L   L++YK QL QV   L  +  N + + ++K+LQEVI LT++LLS T+P++ L S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLS-TQPSETLAS- 62

Query: 70  VETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYDATV-EAHTV 129
                 S S +  QP                 + +G K  AVWSEDG+ Y+A + E    
Sbjct: 63  ------SDSFASTQPT--------------HSWKVGDKCMAVWSEDGQCYEAEIEEIDEE 122

Query: 130 NG-FYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQAGAVDFQS 189
           NG   +++  +GN E     N++P+E    A  ++     + K+ I ++           
Sbjct: 123 NGTAAITFAVYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ----------- 182

Query: 190 RNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSK 249
                            +  K+KK  A K   RI++LE  +  ++  WQQF + A  K+K
Sbjct: 183 -----------------REYKKKK--ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK 230

Query: 250 KIGFFSGRKRESIFKSPDDPSGKVGVTGSG---KGLTEFQKREKH 289
           K     G+ + SIF SP+  +GKVGV   G   K +T++Q   K+
Sbjct: 243 K-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Sed0006174 vs. ExPASy Swiss-Prot
Match: Q5R591 (Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.1e-18
Identity = 85/285 (29.82%), Postives = 136/285 (47.72%), Query Frame = 0


Query: 10  EELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKPNDILGSN 69
           E+L   L++YK QL QV   L  +  N + + ++K+LQEVI LT++LLS T+P++ L S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLS-TQPSETLAS- 62

Query: 70  VETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYDATV-EAHTV 129
                 S S +  QP                 + +G K  A+WSEDG+ Y+A + E    
Sbjct: 63  ------SDSFASTQPT--------------HSWKVGDKCMAIWSEDGQCYEAEIEEIDEE 122

Query: 130 NG-FYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQAGAVDFQS 189
           NG   +++  +GN E     N++P+E    A  ++     + K+ I ++           
Sbjct: 123 NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ----------- 182

Query: 190 RNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSK 249
                            +  K+KK  A K   RI++LE  +  ++  WQQF + A  K+K
Sbjct: 183 -----------------REYKKKK--ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK 230

Query: 250 KIGFFSGRKRESIFKSPDDPSGKVGVTGSG---KGLTEFQKREKH 289
           K     G+ + SIF SP+  +GKVGV   G   K +T++Q   K+
Sbjct: 243 K-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Sed0006174 vs. ExPASy Swiss-Prot
Match: Q4QQU6 (Survival of motor neuron-related-splicing factor 30 OS=Rattus norvegicus OX=10116 GN=Smndc1 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-17
Identity = 86/285 (30.18%), Postives = 136/285 (47.72%), Query Frame = 0


Query: 10  EELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKPNDILGSN 69
           E+L   L++YK QL QV   L  +  N + + ++K+LQEVI LT++LLS T+P++ L S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLS-TQPSETLTS- 62

Query: 70  VETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYDATV-EAHTV 129
                 S S +  QP                 + +G K  AVWSEDG+ Y+A + E    
Sbjct: 63  ------SDSFASTQPT--------------HSWKVGDKCMAVWSEDGQCYEAEIEEIDEE 122

Query: 130 NG-FYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQAGAVDFQS 189
           NG   +++  +GN E     N++P+E    A  ++     + K+ I ++           
Sbjct: 123 NGTAAITFAVYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ----------- 182

Query: 190 RNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSK 249
                            +  K+KK  A K   RI++LE  +  ++  WQQF + A  K+K
Sbjct: 183 -----------------REYKKKK--ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK 230

Query: 250 KIGFFSGRKRESIFKSPDDPSGKVGVTGSG---KGLTEFQKREKH 289
           K     G+ + SIF SP+  +GKVGV   G   K +T++Q   K+
Sbjct: 243 K-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Sed0006174 vs. ExPASy TrEMBL
Match: A0A6J1K7R2 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 GN=LOC111493029 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143
Identity = 266/300 (88.67%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 1   MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTT 60
           MQG EDVS+EEL +NLSTYKDQL QVR+LLD DPGNSEYIDMEKEL+EVIALTEELLST 
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYD 120
           K N+I GSNVETGDDSASISFQQ KG N  E  S+SD+HEKFPIG+KVQAVWSEDGEWYD
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKG-NKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYD 120

Query: 121 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 180
           AT+EAHTVNGFYVSYD WGNKEEVDPANVR I+L VNALLEAERMAEATKQAIKRKIAQA
Sbjct: 121 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQA 180

Query: 181 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240
            +VDFQSRNLPS+LRIEP+DPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS
Sbjct: 181 ASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240

Query: 241 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 300
           AKGKSKKIGFFSGRK+ESIFKSPDDP+GKVGVTGSGKGLTEFQKREKHLHLKGA+ EMDD
Sbjct: 241 AKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Sed0006174 vs. ExPASy TrEMBL
Match: A0A6J1EY48 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=3662 GN=LOC111439780 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143
Identity = 266/300 (88.67%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 1   MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTT 60
           MQG EDVS+EEL +NLSTYKDQL QVR+LLD DPGNSEYIDMEKEL+EVIALTEELLST 
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYD 120
           K N+I GSNVETGDDSASISFQQ KG N  E  S+SD+HEKFPIG+KVQAVWSEDGEWYD
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKG-NKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYD 120

Query: 121 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 180
           AT+EAHTVNGFYVSYD WGNKEEVDPANVR I+L VNALLEAERMAEATKQAIKRKIAQA
Sbjct: 121 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQA 180

Query: 181 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240
            +VDFQSRNLPS+LRIEP+DPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS
Sbjct: 181 ASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240

Query: 241 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 300
           AKGKSKKIGFFSGRK+ESIFKSPDDP+GKVGVTGSGKGLTEFQKREKHLHLKGA+ EMDD
Sbjct: 241 AKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Sed0006174 vs. ExPASy TrEMBL
Match: A0A6J1DPE2 (survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=3673 GN=LOC111022290 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 6.1e-142
Identity = 265/300 (88.33%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 1   MQGAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTT 60
           MQG EDVSIEEL SNLSTYKDQL QVRQLLD DP NSEYIDMEKEL+EVI+LTEELL+T 
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYD 120
           K N+I GSNVETGD+SASISF Q K   + E  S+SDHHEKFPIGSKVQAVWSEDGEWYD
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKM-EAESLSDHHEKFPIGSKVQAVWSEDGEWYD 120

Query: 121 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 180
           AT+EAHTVNGFYVSYD+WGNKEEVDPANVR I+  VNALLEAERMAEATKQAIKRKIAQA
Sbjct: 121 ATIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQA 180

Query: 181 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240
            +VDFQSRNLP KLRIEP+DPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS
Sbjct: 181 ASVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240

Query: 241 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 300
           AKGKSKKIGFFSGRKRESIFKSPDDP+GKVGVTGSGKGLTEFQKREKHLHLKGAT EMDD
Sbjct: 241 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of Sed0006174 vs. ExPASy TrEMBL
Match: A0A1S3CE07 (survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.7e-123
Identity = 231/258 (89.53%), Postives = 244/258 (94.57%), Query Frame = 0


Query: 43  EKELQEVIALTEELLSTTKPNDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKF 102
           +KEL+EVIALTEELLST K N++ GSNVETGDDSASI FQQPK  N  E GS+SD+HEKF
Sbjct: 13  KKELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPK-ENEMEAGSMSDYHEKF 72

Query: 103 PIGSKVQAVWSEDGEWYDATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEA 162
           PIG+KVQAVWSEDGEWYDAT+EAHTVNGFYVSYD WGNKEEVDPANVR I+L VNALLEA
Sbjct: 73  PIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEA 132

Query: 163 ERMAEATKQAIKRKIAQAGAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIE 222
           ERMAEATKQAIKRKIAQA +VDFQSRNLPSKLRIEP+DPEDVKATKRKKIHAFKSKMRIE
Sbjct: 133 ERMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIE 192

Query: 223 QLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEF 282
           QLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDP+GKVGVTGSGKGLTEF
Sbjct: 193 QLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEF 252

Query: 283 QKREKHLHLKGATGEMDD 301
           QKREKHLHLKGAT EMD+
Sbjct: 253 QKREKHLHLKGATVEMDE 269

[Close]

BLAST of Sed0006174 vs. ExPASy TrEMBL
Match: A0A2P5E9G5 (Survival motor neuron OS=Trema orientale OX=63057 GN=TorRG33x02_220610 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.1e-122
Identity = 237/299 (79.26%), Postives = 257/299 (85.95%), Query Frame = 0


Query: 3   GAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKP 62
           G E+VSIEEL SNLSTYKDQLHQV+QLL  DPGNSEY DME+EL EVIALTEELL+T K 
Sbjct: 7   GEEEVSIEELASNLSTYKDQLHQVKQLLADDPGNSEYADMERELNEVIALTEELLATAKQ 66

Query: 63  NDILGSNVETGDDSASISFQQPKGVNLEEVGSISDHHEKFPIGSKVQAVWSEDGEWYDAT 122
           N+  GSN+ T     S  F Q    N ++  SISDH EKFP+G+KVQAVWSEDGEWYDAT
Sbjct: 67  NENSGSNIGT-SAGTSPGFAQ-YNWNEKDSLSISDHQEKFPVGTKVQAVWSEDGEWYDAT 126

Query: 123 VEAHTVNGFYVSYDAWGNKEEVDPANVRPI-ELAVNALLEAERMAEATKQAIKRKIAQAG 182
           +EA T  G+YVSYD WGNKEEVDP N+RPI E  VNALLEAER+AEATKQAIKRKIAQA 
Sbjct: 127 IEALTPIGYYVSYDEWGNKEEVDPDNIRPIPEGTVNALLEAERVAEATKQAIKRKIAQAA 186

Query: 183 AVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 242
           +VDFQSR LP+KLRIEP+DPEDVKATKRKKIHAFKSKMR EQLEVTQNKRQNAWQQFQSA
Sbjct: 187 SVDFQSRTLPAKLRIEPDDPEDVKATKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQSA 246

Query: 243 KGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 301
           KGK+KK+GFFSGRKRESIFKSPDDP GKVGVTGSGKGLTEFQKREKHLHLKG T E D+
Sbjct: 247 KGKTKKVGFFSGRKRESIFKSPDDPFGKVGVTGSGKGLTEFQKREKHLHLKGGTAETDE 303

[Close]

BLAST of Sed0006174 vs. TAIR 10
Match: AT2G02570.1 (nucleic acid binding;RNA binding )

HSP 1 Score: 375.9 bits (964), Expect = 2.9e-104
Identity = 194/300 (64.67%), Postives = 238/300 (79.33%), Query Frame = 0


Query: 3   GAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKP 62
           G E++SIE+L S++STYK+QL QVRQLL  DP NSEY DMEKEL+EVIALTEE+L+T K 
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NDILGSNVETGDDSASISFQQPKGVNLEEVGSISD--HHEKFPIGSKVQAVWSEDGEWYD 122
           N+I  S  + G  + +           E+ G  +D  H  KFP+G+KVQAV+S+DGEWYD
Sbjct: 64  NEI--SLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYD 123

Query: 123 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 182
           AT+EAHT NG++V+YD WGNKEEVDP NVRPIE   NA++EAER+A+ATK A+KRKI +A
Sbjct: 124 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPIE--QNAIVEAERLAQATKNALKRKIEKA 183

Query: 183 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 242
            + D+Q++ LP+KL+I+P DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 184 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 243

Query: 243 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 301
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E  D
Sbjct: 244 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTD 299

[Close]

BLAST of Sed0006174 vs. TAIR 10
Match: AT2G02570.2 (nucleic acid binding;RNA binding )

HSP 1 Score: 375.9 bits (964), Expect = 2.9e-104
Identity = 194/300 (64.67%), Postives = 238/300 (79.33%), Query Frame = 0


Query: 3   GAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKP 62
           G E++SIE+L S++STYK+QL QVRQLL  DP NSEY DMEKEL+EVIALTEE+L+T K 
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NDILGSNVETGDDSASISFQQPKGVNLEEVGSISD--HHEKFPIGSKVQAVWSEDGEWYD 122
           N+I  S  + G  + +           E+ G  +D  H  KFP+G+KVQAV+S+DGEWYD
Sbjct: 64  NEI--SLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYD 123

Query: 123 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 182
           AT+EAHT NG++V+YD WGNKEEVDP NVRPIE   NA++EAER+A+ATK A+KRKI +A
Sbjct: 124 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPIE--QNAIVEAERLAQATKNALKRKIEKA 183

Query: 183 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 242
            + D+Q++ LP+KL+I+P DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 184 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 243

Query: 243 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 301
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E  D
Sbjct: 244 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTD 299

[Close]

BLAST of Sed0006174 vs. TAIR 10
Match: AT2G02570.4 (nucleic acid binding;RNA binding )

HSP 1 Score: 375.9 bits (964), Expect = 2.9e-104
Identity = 194/300 (64.67%), Postives = 238/300 (79.33%), Query Frame = 0


Query: 3   GAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKP 62
           G E++SIE+L S++STYK+QL QVRQLL  DP NSEY DMEKEL+EVIALTEE+L+T K 
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NDILGSNVETGDDSASISFQQPKGVNLEEVGSISD--HHEKFPIGSKVQAVWSEDGEWYD 122
           N+I  S  + G  + +           E+ G  +D  H  KFP+G+KVQAV+S+DGEWYD
Sbjct: 64  NEI--SLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYD 123

Query: 123 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 182
           AT+EAHT NG++V+YD WGNKEEVDP NVRPIE   NA++EAER+A+ATK A+KRKI +A
Sbjct: 124 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPIE--QNAIVEAERLAQATKNALKRKIEKA 183

Query: 183 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 242
            + D+Q++ LP+KL+I+P DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 184 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 243

Query: 243 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 301
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E  D
Sbjct: 244 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTD 299

[Close]

BLAST of Sed0006174 vs. TAIR 10
Match: AT2G02570.3 (nucleic acid binding;RNA binding )

HSP 1 Score: 349.7 bits (896), Expect = 2.3e-96
Identity = 184/300 (61.33%), Postives = 228/300 (76.00%), Query Frame = 0


Query: 3   GAEDVSIEELGSNLSTYKDQLHQVRQLLDVDPGNSEYIDMEKELQEVIALTEELLSTTKP 62
           G E++SIE+L S++STYK+QL QVRQLL  DP NSEY DMEKEL+EVIALTEE+L+T K 
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NDILGSNVETGDDSASISFQQPKGVNLEEVGSISD--HHEKFPIGSKVQAVWSEDGEWYD 122
           N+I  S  + G  + +           E+ G  +D  H  KFP+G+KVQAV+S+DGEWYD
Sbjct: 64  NEI--SLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYD 123

Query: 123 ATVEAHTVNGFYVSYDAWGNKEEVDPANVRPIELAVNALLEAERMAEATKQAIKRKIAQA 182
           AT+EAHT NG++V+YD WGNKEEVDP NVRPIE   NA++EAER+A+ATK A+KRKI +A
Sbjct: 124 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPIE--QNAIVEAERLAQATKNALKRKIEKA 183

Query: 183 GAVDFQSRNLPSKLRIEPEDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 242
            + D+Q++ LP+KL+I+P DPEDVK  KRKKIH            V QNK+QN WQQFQ+
Sbjct: 184 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIH------------VVQNKKQNDWQQFQT 243

Query: 243 AKGKSKKIGFFSGRKRESIFKSPDDPSGKVGVTGSGKGLTEFQKREKHLHLKGATGEMDD 301
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E  D
Sbjct: 244 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTD 287

The following BLAST results are available for this feature:

BLAST of Sed0006174 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876515.1	1.6e-144	90.00	survival of motor neuron-related-splicing factor 30 [Benincasa hispida]	[more]
XP_004142808.1	2.3e-143	88.67	survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus]...	[more]
XP_022933076.1	5.1e-143	88.67	survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022...	[more]
XP_022155149.1	1.3e-141	88.33	survival of motor neuron-related-splicing factor 30 [Momordica charantia]	[more]
KAG7032438.1	2.2e-138	81.79	Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subs...	[more]

BLAST of Sed0006174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DEY1	4.8e-19	31.47	Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=836...	[more]
O75940	7.0e-18	30.18	Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=S...	[more]
Q8BGT7	7.0e-18	30.18	Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=...	[more]
Q5R591	9.1e-18	29.82	Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=S...	[more]
Q4QQU6	1.2e-17	30.18	Survival of motor neuron-related-splicing factor 30 OS=Rattus norvegicus OX=1011...	[more]

BLAST of Sed0006174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7R2	2.5e-143	88.67	survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EY48	2.5e-143	88.67	survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=366...	[more]
A0A6J1DPE2	6.1e-142	88.33	survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=36...	[more]
A0A1S3CE07	3.7e-123	89.53	survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo O...	[more]
A0A2P5E9G5	4.1e-122	79.26	Survival motor neuron OS=Trema orientale OX=63057 GN=TorRG33x02_220610 PE=4 SV=1	[more]

BLAST of Sed0006174 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02570.1	2.9e-104	64.67	nucleic acid binding;RNA binding	[more]
AT2G02570.2	2.9e-104	64.67	nucleic acid binding;RNA binding	[more]
AT2G02570.4	2.9e-104	64.67	nucleic acid binding;RNA binding	[more]
AT2G02570.3	2.3e-96	61.33	nucleic acid binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 118..138
None	No IPR available	GENE3D	2.30.30.140		coord: 55..112 e-value: 3.0E-11 score: 44.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..240
None	No IPR available	PANTHER	PTHR13681	SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED	coord: 1..253
None	No IPR available	PANTHER	PTHR13681:SF32	BNAA06G34090D PROTEIN	coord: 1..253
None	No IPR available	SUPERFAMILY	63748	Tudor/PWWP/MBT	coord: 60..111
IPR002999	Tudor domain	SMART	SM00333	TUDOR_7	coord: 59..116 e-value: 3.6E-10 score: 49.8
IPR002999	Tudor domain	PROSITE	PS50304	TUDOR	coord: 60..118 score: 13.686065
IPR002999	Tudor domain	CDD	cd04508	TUDOR	coord: 64..110 e-value: 7.8729E-11 score: 54.1411
IPR010304	Survival motor neuron	PFAM	PF06003	SMN	coord: 59..113 e-value: 4.8E-5 score: 22.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006174.1	Sed0006174.1	mRNA
Sed0006174.2	Sed0006174.2	mRNA
Sed0006174.3	Sed0006174.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding